BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943885.2.1
(581 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ161878.1|BQ161878 WHE0483_h04_o07zT Wheat Fusarium gra... 68 7e-010
gb|BU100894.1|BU100894 WHE3359_B07_C13ZS Chinese Spring alu... 66 3e-009
gb|BE445694.1|BE445694 WHE1452_G06_M12ZS Wheat etiolated se... 58 7e-007
gb|BF202058.1|BF202058 WHE1773_C02_E03ZS Wheat pre-anthesis... 58 7e-007
gb|AL824749.1|AL824749 AL824749 p:234 Triticum aestivum cDN... 58 7e-007
gb|CA711259.1|CA711259 wdk2c.pk018.m3 wdk2c Triticum aestiv... 58 7e-007
gb|CD453031.1|CD453031 WHE1452_G06_M12ZT CS wheat etiolated... 58 7e-007
gb|CD929102.1|CD929102 GR45.107A07R010611 GR45 Triticum aes... 58 7e-007
gb|AJ717208.1|AJ717208 AJ717208 Triticum turgidum subsp. du... 58 7e-007
gb|CV761615.1|CV761615 FGAS056003 Triticum aestivum FGAS: L... 58 7e-007
gb|BQ802490.1|BQ802490 WHE2826_E05_I10ZS Triticum monococcu... 56 3e-006
gb|BQ806639.1|BQ806639 WHE3581_D09_H17ZS Wheat developing g... 56 3e-006
gb|CD926341.1|CD926341 G750.121L03F010711 G750 Triticum aes... 56 3e-006
gb|BQ752978.1|BQ752978 WHE4121_E02_I03ZS Wheat salt-stresse... 54 1e-005
gb|CA690686.1|CA690686 wlm96.pk051.j18 wlm96 Triticum aesti... 54 1e-005
gb|CK163163.1|CK163163 FGAS015781 Triticum aestivum FGAS: L... 54 1e-005
gb|BQ483250.1|BQ483250 WHE3506_D01_G02ZS Wheat unstressed r... 52 4e-005
gb|CA712533.1|CA712533 wdk3c.pk006.o10 wdk3c Triticum aesti... 52 4e-005
gb|CA714936.1|CA714936 wdk3c.pk022.k16 wdk3c Triticum aesti... 52 4e-005
gb|CD877708.1|CD877708 AZO4.100O15F010925 AZO4 Triticum aes... 52 4e-005
gb|CK213999.1|CK213999 FGAS025914 Triticum aestivum FGAS: L... 52 4e-005
gb|CV764475.1|CV764475 FGAS058860 Triticum aestivum FGAS: L... 52 4e-005
gb|BG905076.1|BG905076 TaLr1137A11F TaLr1 Triticum aestivum... 50 2e-004
gb|BJ244644.1|BJ244644 BJ244644 Y. Ogihara unpublished cDNA... 50 2e-004
gb|BJ250503.1|BJ250503 BJ250503 Y. Ogihara unpublished cDNA... 50 2e-004
gb|BQ161855.1|BQ161855 WHE0483-0486_J24_J24ZT Wheat Fusariu... 50 2e-004
gb|BQ161980.1|BQ161980 WHE0488_G12_M24ZT Wheat Fusarium gra... 50 2e-004
gb|BQ752977.1|BQ752977 WHE4121_E01_I01ZS Wheat salt-stresse... 50 2e-004
gb|BQ753053.1|BQ753053 WHE4122_E01_I02ZS Wheat salt-stresse... 50 2e-004
gb|CD872989.1|CD872989 AZO2.122B21F010208 AZO2 Triticum aes... 50 2e-004
gb|CD872990.1|CD872990 AZO2.122B21R010405 AZO2 Triticum aes... 50 2e-004
emb|AJ438338.1|TAE438338 Triticum aestivum partial mRNA for... 50 2e-004
gb|BE428856.1|BE428856 MTD011.F01F990617 ITEC MTD Durum Whe... 48 7e-004
gb|BG908559.1|BG908559 TaLr1169D04F TaLr1 Triticum aestivum... 48 7e-004
gb|BM140405.1|BM140405 WHE0483_h04_o07zS Wheat Fusarium gra... 48 7e-004
gb|BJ230352.1|BJ230352 BJ230352 Y. Ogihara unpublished cDNA... 48 7e-004
gb|CA627517.1|CA627517 wl1n.pk153.d11 wl1n Triticum aestivu... 48 7e-004
gb|CD874269.1|CD874269 AZO3.101M04R011123 AZO3 Triticum aes... 48 7e-004
gb|CD882790.1|CD882790 F1.111D15F010430 F1 Triticum aestivu... 48 7e-004
gb|CD922960.1|CD922960 G750.105M17F010531 G750 Triticum aes... 48 7e-004
gb|CD926713.1|CD926713 GR45.001N13R001013 GR45 Triticum aes... 48 7e-004
gb|CK168486.1|CK168486 FGAS043018 Triticum aestivum FGAS: T... 48 7e-004
gb|AL808279.1|AL808279 AL808279 a:22 Triticum aestivum cDNA... 48 7e-004
gb|CV765798.1|CV765798 FGAS060185 Triticum aestivum FGAS: L... 48 7e-004
gb|BJ313071.1|BJ313071 BJ313071 Y. Ogihara unpublished cDNA... 46 0.003
gb|BJ318808.1|BJ318808 BJ318808 Y. Ogihara unpublished cDNA... 46 0.003
gb|CD867509.1|CD867509 AZO2.106H18R010329 AZO2 Triticum aes... 46 0.003
gb|CD878628.1|CD878628 AZO4.103E04F010929 AZO4 Triticum aes... 46 0.003
gb|CD922722.1|CD922722 G750.104K20F010529 G750 Triticum aes... 46 0.003
gb|CK207680.1|CK207680 FGAS019331 Triticum aestivum FGAS: L... 46 0.003
gb|DR736708.1|DR736708 FGAS082078 Triticum aestivum FGAS: L... 46 0.003
gb|BE400071.1|BE400071 AWB010.C05F000328 ITEC AWB Wheat Mei... 44 0.011
gb|BE428405.1|BE428405 MTD006.F09F990616 ITEC MTD Durum Whe... 44 0.011
gb|BE443274.1|BE443274 WHE1110_B09_C18ZS Wheat etiolated se... 44 0.011
gb|BE586089.1|BE586089 Est#8pT7_H03_h3_028 KSU wheat Fusari... 44 0.011
gb|BG906285.1|BG906285 TaLr1148B05F TaLr1 Triticum aestivum... 44 0.011
gb|BG908180.1|BG908180 TaLr1166B10F TaLr1 Triticum aestivum... 44 0.011
gb|BM137436.1|BM137436 WHE0475_B01_C01ZS Wheat Fusarium gra... 44 0.011
gb|BJ295748.1|BJ295748 BJ295748 Y. Ogihara unpublished cDNA... 44 0.011
gb|BQ169201.1|BQ169201 WHE2162_E06_J12ZT Triticum turgidum ... 44 0.011
gb|CA604775.1|CA604775 wr1.pk0039.h4 wr1 Triticum aestivum ... 44 0.011
gb|CA638832.1|CA638832 wre1n.pk0016.h9 wre1n Triticum aesti... 44 0.011
gb|CA655993.1|CA655993 wlm0.pk0021.d10 wlm0 Triticum aestiv... 44 0.011
gb|CA703125.1|CA703125 wdk1c.pk008.o13 wdk1c Triticum aesti... 44 0.011
gb|CA732032.1|CA732032 wlp1c.pk002.f17 wlp1c Triticum aesti... 44 0.011
gb|CA732916.1|CA732916 wlp1c.pk006.g19 wlp1c Triticum aesti... 44 0.011
gb|CD453448.1|CD453448 WHE0752_C06_E12ZT CS wheat heat-stre... 44 0.011
gb|CD491370.1|CD491370 WHE3085_F05_L09ZT CS wheat cold-stre... 44 0.011
gb|CD873775.1|CD873775 AZO3.100K08F010925 AZO3 Triticum aes... 44 0.011
gb|CD880277.1|CD880277 F1.001D23F001129 F1 Triticum aestivu... 44 0.011
gb|CD885680.1|CD885680 G118.100B15R010921 G118 Triticum aes... 44 0.011
gb|CD935623.1|CD935623 OV.101P23R010406 OV Triticum aestivu... 44 0.011
gb|CK213976.1|CK213976 FGAS025891 Triticum aestivum FGAS: L... 44 0.011
gb|CV773219.1|CV773219 FGAS067615 Triticum aestivum FGAS: L... 44 0.011
gb|DR432305.1|DR432305 441E-825 Line 441 epidermal library ... 44 0.011
gb|BT009372.1| Triticum aestivum clone wlm96.pk028.k4:fis, ... 44 0.011
gb|BJ247473.1|BJ247473 BJ247473 Y. Ogihara unpublished cDNA... 42 0.042
gb|BQ804376.1|BQ804376 WHE3553_G10_N19ZS Wheat developing g... 42 0.042
gb|CA612266.1|CA612266 wr1.pk0139.e8 wr1 Triticum aestivum ... 42 0.042
gb|CA733021.1|CA733021 wlp1c.pk006.f2 wlp1c Triticum aestiv... 42 0.042
gb|CD871509.1|CD871509 AZO2.118G11R010403 AZO2 Triticum aes... 42 0.042
gb|CD878484.1|CD878484 AZO4.102N19F011002 AZO4 Triticum aes... 42 0.042
gb|CD878629.1|CD878629 AZO4.103E04R011122 AZO4 Triticum aes... 42 0.042
gb|CD881956.1|CD881956 F1.104N12F010330 F1 Triticum aestivu... 42 0.042
gb|CN012928.1|CN012928 WHE3954_F06_L12ZS Wheat Fusarium gra... 42 0.042
gb|CV760335.1|CV760335 FGAS054719 Triticum aestivum FGAS: L... 42 0.042
gb|AJ888635.1|AJ888635 AJ888635 Triticum aestivum cv. Fidel... 42 0.042
gb|BG905373.1|BG905373 TaLr1139C08F TaLr1 Triticum aestivum... 40 0.16
gb|BQ803441.1|BQ803441 WHE2837_F11_K21ZS Triticum monococcu... 40 0.16
gb|CA625114.1|CA625114 wl1n.pk0123.c12 wl1n Triticum aestiv... 40 0.16
gb|CD862317.1|CD862317 AZO1.103C21F010126 AZO1 Triticum aes... 40 0.16
gb|CD862532.1|CD862532 AZO1.103M17R010504 AZO1 Triticum aes... 40 0.16
gb|CD902386.1|CD902386 G356.106N19F010918 G356 Triticum aes... 40 0.16
gb|CD904233.1|CD904233 G356.112O02F010920 G356 Triticum aes... 40 0.16
gb|CK202678.1|CK202678 FGAS011203 Triticum aestivum FGAS: L... 40 0.16
gb|CK202991.1|CK202991 FGAS011517 Triticum aestivum FGAS: L... 40 0.16
gb|CK208582.1|CK208582 FGAS020296 Triticum aestivum FGAS: L... 40 0.16
gb|CV760683.1|CV760683 FGAS055069 Triticum aestivum FGAS: L... 40 0.16
emb|AJ438333.1|TAE438333 Triticum aestivum partial mRNA for... 40 0.16
emb|AJ438335.1|TAE438335 Triticum aestivum partial mRNA for... 40 0.16
>gb|BQ161878.1|BQ161878 WHE0483_h04_o07zT Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0483_h04_o07,
mRNA sequence
Length = 633
Score = 67.9 bits (34), Expect = 7e-010
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 427 ggccaaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagc 486
||||||||| || |||||||||||||| || || |||||||| ||||| ||||| |||||
Sbjct: 283 ggccaaggatgcaatgcaggaaggagggagttccgacaagaatattgctgaatttgcagc 224
Query: 487 caagtattta 496
|||||||||
Sbjct: 223 taagtattta 214
Score = 52.0 bits (26), Expect = 4e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 337 gaggaaggaggtggagaggtgcataagggaggtgatgg 374
|||| ||||||||||||||||||| ||| |||||||||
Sbjct: 372 gagggaggaggtggagaggtgcatcaggaaggtgatgg 335
>gb|BU100894.1|BU100894 WHE3359_B07_C13ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3359_B07_C13,
mRNA sequence
Length = 575
Score = 65.9 bits (33), Expect = 3e-009
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 152 gaggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcg 208
||||||||||| ||| ||||||| || ||||||||| |||||||||||||||||||
Sbjct: 128 gaggtgctggctcacgaggccacggggtgcttcctggtgcactgcgggtggaactcg 184
>gb|BE445694.1|BE445694 WHE1452_G06_M12ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1452_G06_M12,
mRNA sequence
Length = 372
Score = 58.0 bits (29), Expect = 7e-007
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgac 210
|||||||||||||||||||||||||||||
Sbjct: 62 ttcctgacgcactgcgggtggaactcgac 90
>gb|BF202058.1|BF202058 WHE1773_C02_E03ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1773_C02_E03, mRNA sequence
Length = 486
Score = 58.0 bits (29), Expect = 7e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 180 gcttcctgacgcactgcgggtggaactcgacga 212
|||||||||||||| ||||||||||||||||||
Sbjct: 400 gcttcctgacgcacagcgggtggaactcgacga 432
>gb|AL824749.1|AL824749 AL824749 p:234 Triticum aestivum cDNA clone G05_p234_plate_1, mRNA
sequence
Length = 441
Score = 58.0 bits (29), Expect = 7e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 210 tgcttcgtgacgcactgcgggtggaactcgacg 242
>gb|CA711259.1|CA711259 wdk2c.pk018.m3 wdk2c Triticum aestivum cDNA clone wdk2c.pk018.m3 5'
end, mRNA sequence
Length = 366
Score = 58.0 bits (29), Expect = 7e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 128 tgcttcgtgacgcactgcgggtggaactcgacg 160
>gb|CD453031.1|CD453031 WHE1452_G06_M12ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1452_G06_M12,
mRNA sequence
Length = 589
Score = 58.0 bits (29), Expect = 7e-007
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgac 210
|||||||||||||||||||||||||||||
Sbjct: 522 ttcctgacgcactgcgggtggaactcgac 494
>gb|CD929102.1|CD929102 GR45.107A07R010611 GR45 Triticum aestivum cDNA clone GR45107A07,
mRNA sequence
Length = 666
Score = 58.0 bits (29), Expect = 7e-007
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactcgacga 212
|||||||||||||| ||||||||||||||||||
Sbjct: 514 gcttcctgacgcacagcgggtggaactcgacga 482
>gb|AJ717208.1|AJ717208 AJ717208 Triticum turgidum subsp. durum etiolated seedling 20 days
Triticum turgidum subsp. durum cDNA clone 11457R, mRNA
sequence
Length = 563
Score = 58.0 bits (29), Expect = 7e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
||||| |||||||||||||||||||||||||||
Sbjct: 437 tgctttctgacgcactgcgggtggaactcgacg 469
>gb|CV761615.1|CV761615 FGAS056003 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 850
Score = 58.0 bits (29), Expect = 7e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 499 tgcttcgtgacgcactgcgggtggaactcgacg 531
>gb|BQ802490.1|BQ802490 WHE2826_E05_I10ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2826_E05_I10, mRNA
sequence
Length = 714
Score = 56.0 bits (28), Expect = 3e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgac 210
|||||| |||||||||||||||||||||||||
Sbjct: 180 tgcttcgtgacgcactgcgggtggaactcgac 211
>gb|BQ806639.1|BQ806639 WHE3581_D09_H17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3581_D09_H17, mRNA sequence
Length = 552
Score = 56.0 bits (28), Expect = 3e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 153 aggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcg 208
|||||||||| ||| ||||||| || |||||||| |||||||||||||||||||
Sbjct: 92 aggtgctggcccacgaggccacgggaggcttcctggtgcactgcgggtggaactcg 147
>gb|CD926341.1|CD926341 G750.121L03F010711 G750 Triticum aestivum cDNA clone G750121L03,
mRNA sequence
Length = 473
Score = 56.0 bits (28), Expect = 3e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 176 ggttgcttcctgacgcactgcgggtggaactc 207
||||||||| ||||||||||||||||||||||
Sbjct: 86 ggttgcttcgtgacgcactgcgggtggaactc 117
>gb|BQ752978.1|BQ752978 WHE4121_E02_I03ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4121_E02_I03, mRNA sequence
Length = 666
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacgat 213
|||||| || |||||||||||||||||||||||||
Sbjct: 619 tgcttcgtgtcgcactgcgggtggaactcgacgat 585
>gb|CA690686.1|CA690686 wlm96.pk051.j18 wlm96 Triticum aestivum cDNA clone wlm96.pk051.j18
5' end, mRNA sequence
Length = 453
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacgat 213
|||||| || |||||||||||||||||||||||||
Sbjct: 2 tgcttcgtgtcgcactgcgggtggaactcgacgat 36
>gb|CK163163.1|CK163163 FGAS015781 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1089
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacgat 213
|||||| || |||||||||||||||||||||||||
Sbjct: 696 tgcttcgtgtcgcactgcgggtggaactcgacgat 730
>gb|BQ483250.1|BQ483250 WHE3506_D01_G02ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3506_D01_G02, mRNA sequence
Length = 625
Score = 52.0 bits (26), Expect = 4e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactc 207
||||||||||||||||||||||||||
Sbjct: 228 ttcctgacgcactgcgggtggaactc 253
>gb|CA712533.1|CA712533 wdk3c.pk006.o10 wdk3c Triticum aestivum cDNA clone wdk3c.pk006.o10
5' end, mRNA sequence
Length = 264
Score = 52.0 bits (26), Expect = 4e-005
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 152 gaggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcg 208
||||||||||| ||| | ||||| | ||||||||| ||||||| |||||||||||
Sbjct: 61 gaggtgctggctcacgangccacngngtgcttcctgntgcactgcnggtggaactcg 117
>gb|CA714936.1|CA714936 wdk3c.pk022.k16 wdk3c Triticum aestivum cDNA clone wdk3c.pk022.k16
5' end, mRNA sequence
Length = 441
Score = 52.0 bits (26), Expect = 4e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcg 208
|||||| |||||||||||||||||||||||
Sbjct: 17 tgcttcgtgacgcactgcgggtggaactcg 46
>gb|CD877708.1|CD877708 AZO4.100O15F010925 AZO4 Triticum aestivum cDNA clone AZO4100O15,
mRNA sequence
Length = 757
Score = 52.0 bits (26), Expect = 4e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
|||| |||||||| || || || || ||||||||||||||||| || | ||||| |||
Sbjct: 499 agcttgacgagcttggaaatgggctctgcgattccggcaagccatttctctgggtcgtga 558
Query: 66 ggtccaacgaggca 79
||||||||||||||
Sbjct: 559 ggtccaacgaggca 572
>gb|CK213999.1|CK213999 FGAS025914 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1027
Score = 52.0 bits (26), Expect = 4e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||||||||||||||||
Sbjct: 566 ttcctgacgcactccgggtggaactcgacg 537
>gb|CV764475.1|CV764475 FGAS058860 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 825
Score = 52.0 bits (26), Expect = 4e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcg 208
|||||| |||||||||||||||||||||||
Sbjct: 690 tgcttcgtgacgcactgcgggtggaactcg 661
>gb|BG905076.1|BG905076 TaLr1137A11F TaLr1 Triticum aestivum cDNA clone TaLr1137A11 3',
mRNA sequence
Length = 561
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 181 cttcctgacgcactgcgggtggaactcga 209
||||||||||||||| |||||||||||||
Sbjct: 449 cttcctgacgcactgtgggtggaactcga 421
>gb|BJ244644.1|BJ244644 BJ244644 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf15o04 5', mRNA sequence
Length = 542
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 181 cttcctgacgcactgcgggtggaactcga 209
||||||||||||||| |||||||||||||
Sbjct: 327 cttcctgacgcactgtgggtggaactcga 355
>gb|BJ250503.1|BJ250503 BJ250503 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf15o04 3', mRNA sequence
Length = 684
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 181 cttcctgacgcactgcgggtggaactcga 209
||||||||||||||| |||||||||||||
Sbjct: 426 cttcctgacgcactgtgggtggaactcga 398
>gb|BQ161855.1|BQ161855 WHE0483-0486_J24_J24ZT Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0483-0486_J24_J24, mRNA sequence
Length = 657
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 181 cttcctgacgcactgcgggtggaactcga 209
||||||||||||||| |||||||||||||
Sbjct: 459 cttcctgacgcactgtgggtggaactcga 431
>gb|BQ161980.1|BQ161980 WHE0488_G12_M24ZT Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0488_G12_M24,
mRNA sequence
Length = 675
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 181 cttcctgacgcactgcgggtggaactcga 209
||||||||||||||| |||||||||||||
Sbjct: 467 cttcctgacgcactgtgggtggaactcga 439
>gb|BQ752977.1|BQ752977 WHE4121_E01_I01ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4121_E01_I01, mRNA sequence
Length = 612
Score = 50.1 bits (25), Expect = 2e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 189 cgcactgcgggtggaactcgacgat 213
|||||||||||||||||||||||||
Sbjct: 609 cgcactgcgggtggaactcgacgat 585
>gb|BQ753053.1|BQ753053 WHE4122_E01_I02ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4122_E01_I02, mRNA sequence
Length = 612
Score = 50.1 bits (25), Expect = 2e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 189 cgcactgcgggtggaactcgacgat 213
|||||||||||||||||||||||||
Sbjct: 609 cgcactgcgggtggaactcgacgat 585
>gb|CD872989.1|CD872989 AZO2.122B21F010208 AZO2 Triticum aestivum cDNA clone AZO2122B21,
mRNA sequence
Length = 630
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 181 cttcctgacgcactgcgggtggaactcga 209
|||||||||||||| ||||||||||||||
Sbjct: 431 cttcctgacgcactacgggtggaactcga 459
>gb|CD872990.1|CD872990 AZO2.122B21R010405 AZO2 Triticum aestivum cDNA clone AZO2122B21,
mRNA sequence
Length = 795
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 181 cttcctgacgcactgcgggtggaactcga 209
|||||||||||||| ||||||||||||||
Sbjct: 460 cttcctgacgcactacgggtggaactcga 432
>emb|AJ438338.1|TAE438338 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt1i15e
Length = 601
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 181 cttcctgacgcactgcgggtggaactcga 209
|||||||||||||| ||||||||||||||
Sbjct: 511 cttcctgacgcactacgggtggaactcga 539
>gb|BE428856.1|BE428856 MTD011.F01F990617 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD011.F01, mRNA
sequence
Length = 402
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 181 cttcctgacgcactgcgggtggaactcg 208
|||| |||||||||||||||||||||||
Sbjct: 199 cttcgtgacgcactgcgggtggaactcg 226
>gb|BG908559.1|BG908559 TaLr1169D04F TaLr1 Triticum aestivum cDNA clone TaLr1169D04 3',
mRNA sequence
Length = 642
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactc 207
||||||| ||||||||||||||||||||
Sbjct: 520 gcttcctcacgcactgcgggtggaactc 493
>gb|BM140405.1|BM140405 WHE0483_h04_o07zS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0483_h04_o07,
mRNA sequence
Length = 659
Score = 48.1 bits (24), Expect = 7e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 32 tgcgattccggcaagcctttcgtttgggtgctgaggtccaacgaggca 79
|||| ||||||||||||||| | ||||| |||||||||||||||||
Sbjct: 384 tgcggttccggcaagccttttctctgggtcgtgaggtccaacgaggca 431
>gb|BJ230352.1|BJ230352 BJ230352 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl22g03 3', mRNA sequence
Length = 562
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactc 207
|||| |||||||||||||||||||||||
Sbjct: 500 gctttctgacgcactgcgggtggaactc 473
>gb|CA627517.1|CA627517 wl1n.pk153.d11 wl1n Triticum aestivum cDNA clone wl1n.pk153.d11 5'
end, mRNA sequence
Length = 488
Score = 48.1 bits (24), Expect = 7e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgac 210
|||||| || ||||||||||||||||||||||
Sbjct: 92 tgcttcgtgtcgcactgcgggtggaactcgac 123
>gb|CD874269.1|CD874269 AZO3.101M04R011123 AZO3 Triticum aestivum cDNA clone AZO3101M04,
mRNA sequence
Length = 657
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactc 207
||||||| ||||||||||||||||||||
Sbjct: 557 gcttcctcacgcactgcgggtggaactc 530
>gb|CD882790.1|CD882790 F1.111D15F010430 F1 Triticum aestivum cDNA clone F1111D15, mRNA
sequence
Length = 730
Score = 48.1 bits (24), Expect = 7e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgac 210
|||||| || ||||||||||||||||||||||
Sbjct: 434 tgcttcgtgtcgcactgcgggtggaactcgac 465
>gb|CD922960.1|CD922960 G750.105M17F010531 G750 Triticum aestivum cDNA clone G750105M17,
mRNA sequence
Length = 609
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactc 207
||||||| ||||||||||||||||||||
Sbjct: 549 gcttcctcacgcactgcgggtggaactc 522
>gb|CD926713.1|CD926713 GR45.001N13R001013 GR45 Triticum aestivum cDNA clone GR45001N13,
mRNA sequence
Length = 726
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactc 207
||||||| ||||||||||||||||||||
Sbjct: 494 gcttcctcacgcactgcgggtggaactc 467
>gb|CK168486.1|CK168486 FGAS043018 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1181
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactc 207
||||||| ||||||||||||||||||||
Sbjct: 616 gcttcctcacgcactgcgggtggaactc 589
>gb|AL808279.1|AL808279 AL808279 a:22 Triticum aestivum cDNA clone F02_a22_plate_14, mRNA
sequence
Length = 440
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaact 206
|||||| |||||||||||||||||||||
Sbjct: 413 tgcttcgtgacgcactgcgggtggaact 440
>gb|CV765798.1|CV765798 FGAS060185 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 181 cttcctgacgcactgcgggtggaactcg 208
|||| |||||||||||||||||||||||
Sbjct: 175 cttcgtgacgcactgcgggtggaactcg 202
>gb|BJ313071.1|BJ313071 BJ313071 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf3h22 5', mRNA sequence
Length = 477
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 189 cgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||
Sbjct: 15 cgcactgcgggtggaactcgacg 37
>gb|BJ318808.1|BJ318808 BJ318808 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf3h22 3', mRNA sequence
Length = 432
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 189 cgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||
Sbjct: 417 cgcactgcgggtggaactcgacg 395
>gb|CD867509.1|CD867509 AZO2.106H18R010329 AZO2 Triticum aestivum cDNA clone AZO2106H18,
mRNA sequence
Length = 705
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 599 tgacgcactgcgggtggaactcg 577
>gb|CD878628.1|CD878628 AZO4.103E04F010929 AZO4 Triticum aestivum cDNA clone AZO4103E04,
mRNA sequence
Length = 520
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 191 cactgcgggtggaactcgacgat 213
|||||||||||||||||||||||
Sbjct: 135 cactgcgggtggaactcgacgat 157
>gb|CD922722.1|CD922722 G750.104K20F010529 G750 Triticum aestivum cDNA clone G750104K20,
mRNA sequence
Length = 488
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 181 cttcctgacgcactgcgggtggaactcgacg 211
|||| ||||||||||||| ||||||||||||
Sbjct: 440 cttcgtgacgcactgcggctggaactcgacg 470
>gb|CK207680.1|CK207680 FGAS019331 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1085
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 181 cttcctgacgcactgcgggtggaactc 207
|||||||||||||| ||||||||||||
Sbjct: 540 cttcctgacgcactacgggtggaactc 514
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 150,629
Number of Sequences: 636343
Number of extensions: 150629
Number of successful extensions: 39365
Number of sequences better than 0.5: 100
Number of HSP's better than 0.5 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39246
Number of HSP's gapped (non-prelim): 119
length of query: 581
length of database: 367,240,239
effective HSP length: 19
effective length of query: 562
effective length of database: 355,149,722
effective search space: 199594143764
effective search space used: 199594143764
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)