BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2850725.2.1
(847 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ619634.1|BQ619634 TaLr1176C03F TaLr1 Triticum aestivum... 113 2e-023
gb|AL827153.1|AL827153 AL827153 p:638 Triticum aestivum cDN... 113 2e-023
gb|CA638200.1|CA638200 wre1n.pk0006.a4 wre1n Triticum aesti... 113 2e-023
gb|CK163990.1|CK163990 FGAS016634 Triticum aestivum FGAS: L... 113 2e-023
gb|BE405350.1|BE405350 WHE1213_D02_G03ZS Wheat etiolated se... 107 1e-021
gb|CD869954.1|CD869954 AZO2.113B06F001130 AZO2 Triticum aes... 107 1e-021
gb|AL828035.1|AL828035 AL828035 p:739 Triticum aestivum cDN... 105 5e-021
gb|CA653668.1|CA653668 wre1n.pk191.g1 wre1n Triticum aestiv... 100 3e-019
gb|BJ279792.1|BJ279792 BJ279792 Y. Ogihara unpublished cDNA... 94 2e-017
gb|BQ578790.1|BQ578790 WHE0309_G09_M17ZS Wheat unstressed s... 94 2e-017
gb|AL822776.1|AL822776 AL822776 p:335 Triticum aestivum cDN... 94 2e-017
gb|AL825202.1|AL825202 AL825202 p:335 Triticum aestivum cDN... 94 2e-017
gb|CA608145.1|CA608145 wr1.pk0085.f12 wr1 Triticum aestivum... 94 2e-017
gb|CF569198.1|CF569198 EST059 Subtracted, Clontech (cat. # ... 94 2e-017
gb|CA637974.1|CA637974 wre1n.pk0005.e6 wre1n Triticum aesti... 88 1e-015
gb|CD865328.1|CD865328 AZO2.073L14R000922 AZO2 Triticum aes... 88 1e-015
gb|BF293595.1|BF293595 WHE2158_F10_L20ZS Triticum turgidum ... 86 5e-015
gb|CA616132.1|CA616132 wr1.pk181.c9 wr1 Triticum aestivum c... 86 5e-015
gb|CD865646.1|CD865646 AZO2.101G10F010111 AZO2 Triticum aes... 84 2e-014
gb|BQ744485.1|BQ744485 WHE4116_B08_D16ZS Wheat salt-stresse... 74 2e-011
gb|CA640187.1|CA640187 wre1n.pk0030.h12 wre1n Triticum aest... 74 2e-011
gb|CA644072.1|CA644072 wre1n.pk0076.h12 wre1n Triticum aest... 74 2e-011
gb|CA608863.1|CA608863 wr1.pk0097.d6 wr1 Triticum aestivum ... 72 7e-011
gb|CK198199.1|CK198199 FGAS006683 Triticum aestivum FGAS: L... 70 3e-010
gb|AL829763.1|AL829763 AL829763 p:840 Triticum aestivum cDN... 68 1e-009
gb|BJ284375.1|BJ284375 BJ284375 Y. Ogihara unpublished cDNA... 66 4e-009
gb|BJ285116.1|BJ285116 BJ285116 Y. Ogihara unpublished cDNA... 66 4e-009
gb|CA611777.1|CA611777 wr1.pk0134.f7 wr1 Triticum aestivum ... 62 7e-008
gb|CA615395.1|CA615395 wr1.pk164.c7 wr1 Triticum aestivum c... 60 3e-007
gb|CA645072.1|CA645072 wre1n.pk0086.c8 wre1n Triticum aesti... 60 3e-007
gb|CA605859.1|CA605859 wr1.pk0061.f7 wr1 Triticum aestivum ... 58 1e-006
gb|CK193680.1|CK193680 FGAS002096 Triticum aestivum FGAS: L... 58 1e-006
gb|CK198244.1|CK198244 FGAS006728 Triticum aestivum FGAS: L... 58 1e-006
gb|BJ282781.1|BJ282781 BJ282781 Y. Ogihara unpublished cDNA... 54 2e-005
gb|CA614079.1|CA614079 wr1.pk0158.b9 wr1 Triticum aestivum ... 54 2e-005
gb|CA639765.1|CA639765 wre1n.pk0027.h5 wre1n Triticum aesti... 54 2e-005
gb|CA652356.1|CA652356 wre1n.pk158.c6 wre1n Triticum aestiv... 54 2e-005
gb|CD867175.1|CD867175 AZO2.105J01R010327 AZO2 Triticum aes... 54 2e-005
gb|CD867532.1|CD867532 AZO2.106I14F001124 AZO2 Triticum aes... 54 2e-005
gb|CK199477.1|CK199477 FGAS007976 Triticum aestivum FGAS: L... 54 2e-005
gb|CV522317.1|CV522317 RH-074 Triticum aestivum subtracted,... 54 2e-005
gb|BJ285704.1|BJ285704 BJ285704 Y. Ogihara unpublished cDNA... 50 3e-004
gb|BJ286081.1|BJ286081 BJ286081 Y. Ogihara unpublished cDNA... 50 3e-004
gb|BJ287392.1|BJ287392 BJ287392 Y. Ogihara unpublished cDNA... 50 3e-004
gb|BQ162424.1|BQ162424 WHE0416_a11_b22zT Wheat etiolated se... 50 3e-004
gb|CA614336.1|CA614336 wr1.pk0159.c10 wr1 Triticum aestivum... 50 3e-004
gb|CA628533.1|CA628533 wle1n.pk0001.g12 wle1n Triticum aest... 50 3e-004
gb|CA645860.1|CA645860 wre1n.pk0101.b3 wre1n Triticum aesti... 50 3e-004
gb|CD877656.1|CD877656 AZO4.100M18F010925 AZO4 Triticum aes... 50 3e-004
gb|CD877657.1|CD877657 AZO4.100M18R011122 AZO4 Triticum aes... 50 3e-004
gb|CK193979.1|CK193979 FGAS002398 Triticum aestivum FGAS: L... 50 3e-004
gb|CK199430.1|CK199430 FGAS007929 Triticum aestivum FGAS: L... 50 3e-004
gb|CK203829.1|CK203829 FGAS012362 Triticum aestivum FGAS: L... 50 3e-004
emb|AX660725.1| Sequence 1082 from Patent WO03000906 48 0.001
gb|BE406840.1|BE406840 WHE0432_h02_p04zS Wheat etiolated se... 46 0.004
gb|BE426704.1|BE426704 WHE0331_D05_H09ZS Wheat unstressed s... 46 0.004
gb|CA614581.1|CA614581 wr1.pk163.f1 wr1 Triticum aestivum c... 46 0.004
gb|CA644794.1|CA644794 wre1n.pk0093.b2 wre1n Triticum aesti... 46 0.004
gb|CD373607.1|CD373607 WHE0432_h02_p04zT CS wheat etiolated... 46 0.004
gb|CD935706.1|CD935706 OV.102E01F010202 OV Triticum aestivu... 46 0.004
gb|CK198257.1|CK198257 FGAS006741 Triticum aestivum FGAS: L... 46 0.004
gb|CV522264.1|CV522264 RH-855 Triticum aestivum subtracted,... 46 0.004
gb|CA610518.1|CA610518 wr1.pk0118.d8 wr1 Triticum aestivum ... 44 0.016
gb|CA651795.1|CA651795 wre1n.pk179.h7 wre1n Triticum aestiv... 44 0.016
gb|CZ888418.1|CZ888418 gy38g05.x1.b.screen Bread wheat meth... 42 0.061
gb|BE403389.1|BE403389 WHE0429_A02_A03ZS Wheat etiolated se... 42 0.061
gb|BE404357.1|BE404357 WHE0441_C04_E07ZS Wheat etiolated se... 42 0.061
gb|BE404816.1|BE404816 WHE1205_C04_E07ZS Wheat etiolated se... 42 0.061
gb|BE404879.1|BE404879 WHE1206_E03_I06ZS Wheat etiolated se... 42 0.061
gb|BE405240.1|BE405240 WHE1210_H01_O02ZS Wheat etiolated se... 42 0.061
gb|BE429229.1|BE429229 MTD015.G09F990621 ITEC MTD Durum Whe... 42 0.061
gb|BE429491.1|BE429491 TAS000.F12R990609 ITEC TAS Wheat cDN... 42 0.061
gb|BJ226428.1|BJ226428 BJ226428 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ231342.1|BJ231342 BJ231342 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ283286.1|BJ283286 BJ283286 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ312697.1|BJ312697 BJ312697 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ318406.1|BJ318406 BJ318406 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ318685.1|BJ318685 BJ318685 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ319018.1|BJ319018 BJ319018 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ319292.1|BJ319292 BJ319292 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ319360.1|BJ319360 BJ319360 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ320160.1|BJ320160 BJ320160 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ320181.1|BJ320181 BJ320181 Y. Ogihara unpublished cDNA... 42 0.061
gb|BJ322680.1|BJ322680 BJ322680 Y. Ogihara unpublished cDNA... 42 0.061
gb|BQ483293.1|BQ483293 WHE3506_G11_M22ZS Wheat unstressed r... 42 0.061
gb|AL822274.1|AL822274 AL822274 p:234 Triticum aestivum cDN... 42 0.061
gb|AL825447.1|AL825447 AL825447 p:335 Triticum aestivum cDN... 42 0.061
gb|BQ744244.1|BQ744244 WHE4113_C12_E23ZS Wheat salt-stresse... 42 0.061
gb|BQ752981.1|BQ752981 WHE4121_E05_I09ZS Wheat salt-stresse... 42 0.061
gb|BU100008.1|BU100008 WHE3314_A11_A22ZS Chinese Spring whe... 42 0.061
gb|CA603834.1|CA603834 wr1.pk0031.b8 wr1 Triticum aestivum ... 42 0.061
gb|CA604266.1|CA604266 wr1.pk0040.e10 wr1 Triticum aestivum... 42 0.061
gb|CA605172.1|CA605172 wr1.pk0046.d8 wr1 Triticum aestivum ... 42 0.061
gb|CA605608.1|CA605608 wr1.pk0055.g10 wr1 Triticum aestivum... 42 0.061
gb|CA607519.1|CA607519 wr1.pk0079.f6 wr1 Triticum aestivum ... 42 0.061
gb|CA609005.1|CA609005 wr1.pk0100.h12 wr1 Triticum aestivum... 42 0.061
gb|CA610613.1|CA610613 wr1.pk0099.c6 wr1 Triticum aestivum ... 42 0.061
gb|CA610920.1|CA610920 wr1.pk0125.f8 wr1 Triticum aestivum ... 42 0.061
gb|CA612031.1|CA612031 wr1.pk0135.e6 wr1 Triticum aestivum ... 42 0.061
gb|CA613234.1|CA613234 wr1.pk0155.d1 wr1 Triticum aestivum ... 42 0.061
gb|CA613412.1|CA613412 wr1.pk0144.h6 wr1 Triticum aestivum ... 42 0.061
gb|CA627584.1|CA627584 wdr1.pk0001.c8 wdr1 Triticum aestivu... 42 0.061
gb|CA638152.1|CA638152 wre1n.pk0006.h8 wre1n Triticum aesti... 42 0.061
gb|CA639357.1|CA639357 wre1n.pk0021.e3 wre1n Triticum aesti... 42 0.061
gb|CA640241.1|CA640241 wre1n.pk0033.b5 wre1n Triticum aesti... 42 0.061
gb|CA643046.1|CA643046 wre1n.pk0070.c6 wre1n Triticum aesti... 42 0.061
gb|CK201312.1|CK201312 FGAS009831 Triticum aestivum FGAS: L... 42 0.061
gb|CK211353.1|CK211353 FGAS023192 Triticum aestivum FGAS: L... 42 0.061
gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis,... 42 0.061
gb|BE403246.1|BE403246 WHE0430_B08_C16ZS Wheat etiolated se... 40 0.24
gb|BE404781.1|BE404781 WHE1205_F06_K11ZS Wheat etiolated se... 40 0.24
gb|CA609598.1|CA609598 wr1.pk0108.d5 wr1 Triticum aestivum ... 40 0.24
gb|CA640593.1|CA640593 wre1n.pk0036.f10 wre1n Triticum aest... 40 0.24
gb|CA653072.1|CA653072 wre1n.pk165.e10 wre1n Triticum aesti... 40 0.24
gb|CK216621.1|CK216621 FGAS028617 Triticum aestivum FGAS: L... 40 0.24
>gb|BQ619634.1|BQ619634 TaLr1176C03F TaLr1 Triticum aestivum cDNA clone TaLr1176C03F, mRNA
sequence
Length = 620
Score = 113 bits (57), Expect = 2e-023
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 576 ttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcag 635
||||||||||||||||| ||||| || ||||| |||| | ||||||||||||||||||
Sbjct: 484 ttccctccctcttcccgcgaagggatgaccttcttgcattgagcaaggatcttcacgcag 543
Query: 636 tcctcatcactccagtggtgcagcaccatcttaagtaacaccatttgagcacgtgggatg 695
|||||||||||||||||||||| ||| | ||| | ||||| |||||| ||||||||
Sbjct: 544 tcctcatcactccagtggtgcaacacaagcttgaccaacactgcctgagcaggtgggatg 603
Query: 696 gatttgaacatgtcacc 712
|| ||||||||||||||
Sbjct: 604 gacttgaacatgtcacc 620
>gb|AL827153.1|AL827153 AL827153 p:638 Triticum aestivum cDNA clone F04_p638_plate_6, mRNA
sequence
Length = 558
Score = 113 bits (57), Expect = 2e-023
Identities = 117/137 (85%)
Strand = Plus / Minus
Query: 576 ttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcag 635
||||||||||||||||| ||||| || |||||| |||| | ||||||||||||| ||||
Sbjct: 353 ttccctccctcttcccgcgaagggatggccttcttgcattgagcaaggatcttcatgcag 294
Query: 636 tcctcatcactccagtggtgcagcaccatcttaagtaacaccatttgagcacgtgggatg 695
|||||||||||||||||||||||||| | ||| | ||||| |||||| |||||| |
Sbjct: 293 tcctcatcactccagtggtgcagcacaagcttgatcaacacagcctgagcaggtgggacg 234
Query: 696 gatttgaacatgtcacc 712
|| ||||||||||||||
Sbjct: 233 gacttgaacatgtcacc 217
Score = 46.1 bits (23), Expect = 0.004
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || | |||||||||||| |||||
Sbjct: 543 gacacctcgagctcccagtttcttcacaagttcgtagtcactgaatcctgc 493
>gb|CA638200.1|CA638200 wre1n.pk0006.a4 wre1n Triticum aestivum cDNA clone wre1n.pk0006.a4
5' end, mRNA sequence
Length = 554
Score = 113 bits (57), Expect = 2e-023
Identities = 117/137 (85%)
Strand = Plus / Minus
Query: 576 ttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcag 635
||||||||||||||||| ||||| || |||||| |||| | ||||||||||||| ||||
Sbjct: 288 ttccctccctcttcccgcgaagggatggccttcttgcattgagcaaggatcttcatgcag 229
Query: 636 tcctcatcactccagtggtgcagcaccatcttaagtaacaccatttgagcacgtgggatg 695
|||||||||||||||||||||||||| | ||| | ||||| |||||| |||||| |
Sbjct: 228 tcctcatcactccagtggtgcagcacaagcttgatcaacacagcctgagcaggtgggacg 169
Query: 696 gatttgaacatgtcacc 712
|| ||||||||||||||
Sbjct: 168 gacttgaacatgtcacc 152
>gb|CK163990.1|CK163990 FGAS016634 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1061
Score = 113 bits (57), Expect = 2e-023
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 576 ttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcag 635
||||||||||||||||| ||||| || ||||| |||| | ||||||||||||||||||
Sbjct: 626 ttccctccctcttcccgcgaagggatgaccttcttgcattgagcaaggatcttcacgcag 685
Query: 636 tcctcatcactccagtggtgcagcaccatcttaagtaacaccatttgagcacgtgggatg 695
|||||||||||||||||||||| ||| | ||| | ||||| |||||| ||||||||
Sbjct: 686 tcctcatcactccagtggtgcaacacaagcttgaccaacactgcctgagcaggtgggatg 745
Query: 696 gatttgaacatgtcacc 712
|| ||||||||||||||
Sbjct: 746 gacttgaacatgtcacc 762
>gb|BE405350.1|BE405350 WHE1213_D02_G03ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1213_D02_G03, mRNA
sequence
Length = 605
Score = 107 bits (54), Expect = 1e-021
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 576 ttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcag 635
||||||||||||||||| ||||| || |||||| |||| | ||||||||||||| ||||
Sbjct: 366 ttccctccctcttcccgcgaagggatggccttcttgcattgagcaaggatcttcatgcag 307
Query: 636 tcctcatcactccagtggtgcagcac 661
||||||||||||||||||||||||||
Sbjct: 306 tcctcatcactccagtggtgcagcac 281
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 556 gacacctcgagctcccagtttcttcacaagtttgtagtcactgaatcctgc 506
Score = 40.1 bits (20), Expect = 0.24
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 681 tgagcacgtgggatggatttgaacatgtcacc 712
|||||| |||||| ||| ||||||||||||||
Sbjct: 164 tgagcaggtgggacggacttgaacatgtcacc 133
>gb|CD869954.1|CD869954 AZO2.113B06F001130 AZO2 Triticum aestivum cDNA clone AZO2113B06,
mRNA sequence
Length = 522
Score = 107 bits (54), Expect = 1e-021
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 576 ttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcag 635
||||||||||||||||| ||||| || |||||| |||| | ||||||||||||| ||||
Sbjct: 115 ttccctccctcttcccgcgaagggatggccttcttgcattgagcaaggatcttcatgcag 56
Query: 636 tcctcatcactccagtggtgcagcac 661
||||||||||||||||||||||||||
Sbjct: 55 tcctcatcactccagtggtgcagcac 30
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 305 gacacctcgagctcccagtttcttcacaagtttgtagtcactgaatcctgc 255
>gb|AL828035.1|AL828035 AL828035 p:739 Triticum aestivum cDNA clone C02_p739_plate_5, mRNA
sequence
Length = 569
Score = 105 bits (53), Expect = 5e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 576 ttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcag 635
||||||||||||||||| ||||| || |||||| ||| | |||||||||||||| |||
Sbjct: 560 ttccctccctcttcccgcgaagggatggccttctcgcattgagcaaggatcttcacacag 501
Query: 636 tcctcatcactccagtggtgcagcaccatcttaagtaacaccatttgagcacgtgggatg 695
|||||||||||||||||||||||||| | ||| | ||||| |||||| |||||| |
Sbjct: 500 tcctcatcactccagtggtgcagcacaagcttgatcaacacagcatgagcaggtgggacg 441
Query: 696 gatttgaacatgtcacc 712
|| ||||||||||||||
Sbjct: 440 gacttgaacatgtcacc 424
>gb|CA653668.1|CA653668 wre1n.pk191.g1 wre1n Triticum aestivum cDNA clone wre1n.pk191.g1 5'
end, mRNA sequence
Length = 395
Score = 99.6 bits (50), Expect = 3e-019
Identities = 117/138 (84%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 576 ttccctccctcttcc-cgtgaaggtattgccttcctgcagttggcaaggatcttcacgca 634
||||||||||||||| || ||||| || |||||| |||| | ||||||||||||| |||
Sbjct: 273 ttccctccctcttccgcgggaagggatggccttcttgcattgagcaaggatcttcatgca 214
Query: 635 gtcctcatcactccagtggtgcagcaccatcttaagtaacaccatttgagcacgtgggat 694
||||||||||||||||||||||||||| | ||| | ||||| |||||| ||||||
Sbjct: 213 gtcctcatcactccagtggtgcagcacaagcttgatcaacacagcctgagcaggtgggac 154
Query: 695 ggatttgaacatgtcacc 712
||| ||||||||||||||
Sbjct: 153 ggacttgaacatgtcacc 136
>gb|BJ279792.1|BJ279792 BJ279792 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr4m13 5', mRNA sequence
Length = 561
Score = 93.7 bits (47), Expect = 2e-017
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 579 cctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcagtcc 638
|||||||||||||| ||||| || |||||| |||| | |||||||||||||| ||||||
Sbjct: 319 cctccctcttcccgcgaagggatagccttcttgcattgagcaaggatcttcacacagtcc 260
Query: 639 tcatcactccagtggtgcagcac 661
||||||||||| |||||||||||
Sbjct: 259 tcatcactccaatggtgcagcac 237
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 512 gacacctcgagctcccagtttcttcaaaagtttgtagtcactgaatcctgc 462
>gb|BQ578790.1|BQ578790 WHE0309_G09_M17ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0309_G09_M17, mRNA
sequence
Length = 679
Score = 93.7 bits (47), Expect = 2e-017
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 579 cctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcagtcc 638
|||||||||||||| ||||| || |||||| |||| | |||||||||||||| ||||||
Sbjct: 576 cctccctcttcccgcgaagggatagccttcttgcattgagcaaggatcttcacacagtcc 635
Query: 639 tcatcactccagtggtgcagcac 661
||||||||||| |||||||||||
Sbjct: 636 tcatcactccaatggtgcagcac 658
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 383 gacacctcgagctcccagtttcttcaaaagtttgtagtcactgaatcctgc 433
>gb|AL822776.1|AL822776 AL822776 p:335 Triticum aestivum cDNA clone C12_p335_plate_2, mRNA
sequence
Length = 584
Score = 93.7 bits (47), Expect = 2e-017
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 579 cctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcagtcc 638
|||||||||||||| ||||| || |||||| |||| | |||||||||||||| ||||||
Sbjct: 563 cctccctcttcccgcgaagggatagccttcttgcattgagcaaggatcttcacacagtcc 504
Query: 639 tcatcactccagtggtgcagcac 661
||||||||||| |||||||||||
Sbjct: 503 tcatcactccaatggtgcagcac 481
>gb|AL825202.1|AL825202 AL825202 p:335 Triticum aestivum cDNA clone F01_p335_plate_6, mRNA
sequence
Length = 550
Score = 93.7 bits (47), Expect = 2e-017
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 579 cctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcagtcc 638
|||||||||||||| ||||| || |||||| |||| | |||||||||||||| ||||||
Sbjct: 532 cctccctcttcccgcgaagggatagccttcttgcattgagcaaggatcttcacacagtcc 473
Query: 639 tcatcactccagtggtgcagcac 661
||||||||||| |||||||||||
Sbjct: 472 tcatcactccaatggtgcagcac 450
>gb|CA608145.1|CA608145 wr1.pk0085.f12 wr1 Triticum aestivum cDNA clone wr1.pk0085.f12 5'
end, mRNA sequence
Length = 577
Score = 93.7 bits (47), Expect = 2e-017
Identities = 101/119 (84%)
Strand = Plus / Minus
Query: 618 gcaaggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacacc 677
|||||||||||||| ||||||||||||||||||||||||||||| | ||| | |||||
Sbjct: 273 gcaaggatcttcacacagtcctcatcactccagtggtgcagcacaagcttgatcaacaca 214
Query: 678 atttgagcacgtgggatggatttgaacatgtcacctccaacatagttaacaacaccatc 736
|||||| |||||| ||| |||||||||||||| | || |||||||| ||||||||
Sbjct: 213 gcatgagcaggtgggacggacttgaacatgtcaccggccacgtagttaaccacaccatc 155
>gb|CF569198.1|CF569198 EST059 Subtracted, Clontech (cat. # K1804-1) Triticum aestivum cDNA
clone FDC59 5' similar to Triticum aestivum clone
vreln.pk0021.03, mRNA sequence
Length = 564
Score = 93.7 bits (47), Expect = 2e-017
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 579 cctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcagtcc 638
|||||||||||||| ||||| || |||||| |||| | |||||||||||||| ||||||
Sbjct: 297 cctccctcttcccgcgaagggatagccttcttgcattgagcaaggatcttcacacagtcc 238
Query: 639 tcatcactccagtggtgcagcac 661
||||||||||| |||||||||||
Sbjct: 237 tcatcactccaatggtgcagcac 215
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 490 gacacctcgagctcccagtttcttcaaaagtttgtagtcactgaatcctgc 440
>gb|CA637974.1|CA637974 wre1n.pk0005.e6 wre1n Triticum aestivum cDNA clone wre1n.pk0005.e6
5' end, mRNA sequence
Length = 549
Score = 87.7 bits (44), Expect = 1e-015
Identities = 77/87 (88%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 576 ttccctccctcttcccgt-gaaggtattgccttcctgcagttggcaaggatcttcacgca 634
|||| |||||||||||| ||||| || |||||| |||| | ||||||||||||| |||
Sbjct: 102 ttccntccctcttcccggcgaagggatggccttcttgcattgagcaaggatcttcatgca 43
Query: 635 gtcctcatcactccagtggtgcagcac 661
|||||||||||||||||||||||||||
Sbjct: 42 gtcctcatcactccagtggtgcagcac 16
>gb|CD865328.1|CD865328 AZO2.073L14R000922 AZO2 Triticum aestivum cDNA clone AZO2073L14,
mRNA sequence
Length = 630
Score = 87.7 bits (44), Expect = 1e-015
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 579 cctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacgcagtcc 638
|||||||||| ||| ||||| || |||||| |||| | |||||||||||||| ||||||
Sbjct: 552 cctccctcttnccgcgaagggatggccttcttgcattgagcaaggatcttcacacagtcc 611
Query: 639 tcatcactccagtggtgca 657
|||||||||||||||||||
Sbjct: 612 tcatcactccagtggtgca 630
Score = 46.1 bits (23), Expect = 0.004
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || ||||||||| |||| |||||
Sbjct: 359 gacacctcgagctccgagtttcttcacaagtttgtagtcattgaatcctgc 409
>gb|BF293595.1|BF293595 WHE2158_F10_L20ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2158_F10_L20, mRNA sequence
Length = 545
Score = 85.7 bits (43), Expect = 5e-015
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 618 gcaaggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacacc 677
||||||||||||| |||||||||||||||||||||||||||||| | ||| | |||||
Sbjct: 534 gcaaggatcttcatgcagtcctcatcactccagtggtgcagcacaagcttgatcaacaca 475
Query: 678 atttgagcacgtgggatggatttgaacatgtcacc 712
|||||| |||||| ||| ||||||||||||||
Sbjct: 474 gcctgagcaggtgggacggacttgaacatgtcacc 440
>gb|CA616132.1|CA616132 wr1.pk181.c9 wr1 Triticum aestivum cDNA clone wr1.pk181.c9 5' end,
mRNA sequence
Length = 278
Score = 85.7 bits (43), Expect = 5e-015
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 618 gcaaggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacacc 677
||||||||||||| |||||||||||||||||||||||||||||| | ||| | |||||
Sbjct: 262 gcaaggatcttcatgcagtcctcatcactccagtggtgcagcacaagcttgatcaacaca 203
Query: 678 atttgagcacgtgggatggatttgaacatgtcacc 712
|||||| |||||| ||| ||||||||||||||
Sbjct: 202 gcctgagcaggtgggacggacttgaacatgtcacc 168
>gb|CD865646.1|CD865646 AZO2.101G10F010111 AZO2 Triticum aestivum cDNA clone AZO2101G10,
mRNA sequence
Length = 683
Score = 83.8 bits (42), Expect = 2e-014
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 623 gatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatttg 682
||||||||| ||||||||||||||||||||||||||||| | ||| | ||||| ||
Sbjct: 658 gatcttcacacagtcctcatcactccagtggtgcagcacaagcttgatcaacacagcatg 599
Query: 683 agcacgtgggatggatttgaacatgtcacctccaacatagttaacaacaccatc 736
|||| |||||| ||| |||||||||||||| | || |||||||| ||||||||
Sbjct: 598 agcaggtgggacggacttgaacatgtcaccggccacgtagttaaccacaccatc 545
>gb|BQ744485.1|BQ744485 WHE4116_B08_D16ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4116_B08_D16, mRNA sequence
Length = 720
Score = 73.8 bits (37), Expect = 2e-011
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
||||||||||| ||||| || ||||| || || ||| | || | || |||||||||||||
Sbjct: 575 accttccctccttcttcacgggaaggaatggcattcttacactgggtaaggatcttcacg 516
Query: 633 cagtcctcatcactccagtggtgcagcac 661
||||| || ||||||||||||||||||||
Sbjct: 515 cagtcgtcgtcactccagtggtgcagcac 487
>gb|CA640187.1|CA640187 wre1n.pk0030.h12 wre1n Triticum aestivum cDNA clone
wre1n.pk0030.h12 5' end, mRNA sequence
Length = 561
Score = 73.8 bits (37), Expect = 2e-011
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
||||||||||| ||||| || ||||| || || ||| | || | || |||||||||||||
Sbjct: 233 accttccctccttcttcacgggaaggaatggcattcttacactgggtaaggatcttcacg 174
Query: 633 cagtcctcatcactccagtggtgcagcac 661
||||| || ||||||||||||||||||||
Sbjct: 173 cagtcgtcgtcactccagtggtgcagcac 145
>gb|CA644072.1|CA644072 wre1n.pk0076.h12 wre1n Triticum aestivum cDNA clone
wre1n.pk0076.h12 5' end, mRNA sequence
Length = 495
Score = 73.8 bits (37), Expect = 2e-011
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
||||||||||| ||||| || ||||| || || ||| | || | || |||||||||||||
Sbjct: 152 accttccctccttcttcacgggaaggaatggcattcttacactgggtaaggatcttcacg 93
Query: 633 cagtcctcatcactccagtggtgcagcac 661
||||| || ||||||||||||||||||||
Sbjct: 92 cagtcgtcgtcactccagtggtgcagcac 64
>gb|CA608863.1|CA608863 wr1.pk0097.d6 wr1 Triticum aestivum cDNA clone wr1.pk0097.d6 5'
end, mRNA sequence
Length = 184
Score = 71.9 bits (36), Expect = 7e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 618 gcaaggatcttcacgcagtcctcatcactccagtggtgcagcac 661
|||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 166 gcaaggatcttcacacagtcctcatcactccaatggtgcagcac 123
>gb|CK198199.1|CK198199 FGAS006683 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 860
Score = 69.9 bits (35), Expect = 3e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 623 gatcttcacgcagtcctcatcactccagtggtgcagcac 661
||||||||| |||||||||||||||||||||||||||||
Sbjct: 521 gatcttcacacagtcctcatcactccagtggtgcagcac 559
>gb|AL829763.1|AL829763 AL829763 p:840 Triticum aestivum cDNA clone E02_p840_plate_7, mRNA
sequence
Length = 459
Score = 67.9 bits (34), Expect = 1e-009
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 620 aaggatcttcacgcagtcctcatcactccagtggtgcagcac 661
|||||||||||||||||| || ||||||||||||||||||||
Sbjct: 310 aaggatcttcacgcagtcgtcgtcactccagtggtgcagcac 269
>gb|BJ284375.1|BJ284375 BJ284375 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr2k03 3', mRNA sequence
Length = 739
Score = 65.9 bits (33), Expect = 4e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
||||||||||| ||||| || ||||| || || ||| | || | || ||||||||||||
Sbjct: 393 accttccctccttcttcacgggaaggaatggcattcttacactgggtaaggatcttcaca 452
Query: 633 cagtcctcatcactccagtggtgcagcac 661
||||| || ||||||||||||||||||||
Sbjct: 453 cagtcgtcgtcactccagtggtgcagcac 481
>gb|BJ285116.1|BJ285116 BJ285116 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr6k24 3', mRNA sequence
Length = 592
Score = 65.9 bits (33), Expect = 4e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
||||||||||| ||||| || ||||| || || ||| | || | || ||||||||||||
Sbjct: 457 accttccctccttcttcacgggaaggaatggcattcttacactgggtaaggatcttcaca 516
Query: 633 cagtcctcatcactccagtggtgcagcac 661
||||| || ||||||||||||||||||||
Sbjct: 517 cagtcgtcgtcactccagtggtgcagcac 545
>gb|CA611777.1|CA611777 wr1.pk0134.f7 wr1 Triticum aestivum cDNA clone wr1.pk0134.f7 5'
end, mRNA sequence
Length = 520
Score = 61.9 bits (31), Expect = 7e-008
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
||||||||||| ||||| || ||||| || || ||| | || | || ||||||||||||
Sbjct: 87 accttccctccttcttcacgggaaggaatggcattcttacactgggtaaggatcttcaca 28
Query: 633 cagtcctcatcactccagtggtgcagc 659
||||| || ||||||||||||||||||
Sbjct: 27 cagtcgtcgtcactccagtggtgcagc 1
>gb|CA615395.1|CA615395 wr1.pk164.c7 wr1 Triticum aestivum cDNA clone wr1.pk164.c7 5' end,
mRNA sequence
Length = 528
Score = 60.0 bits (30), Expect = 3e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 620 aaggatcttcacgcagtcctcatcactccagtggtgcagcac 661
|||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 206 aaggatcttcacacagtcgtcgtcactccagtggtgcagcac 165
>gb|CA645072.1|CA645072 wre1n.pk0086.c8 wre1n Triticum aestivum cDNA clone wre1n.pk0086.c8
5' end, mRNA sequence
Length = 601
Score = 60.0 bits (30), Expect = 3e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 620 aaggatcttcacgcagtcctcatcactccagtggtgcagcac 661
|||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 305 aaggatcttcacacagtcgtcgtcactccagtggtgcagcac 264
>gb|CA605859.1|CA605859 wr1.pk0061.f7 wr1 Triticum aestivum cDNA clone wr1.pk0061.f7 5'
end, mRNA sequence
Length = 250
Score = 58.0 bits (29), Expect = 1e-006
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 618 gcaaggatcttcacgcagtcctcatcact-ccagtggtgcagcac 661
||||||| |||||| |||||||||||||| |||||||||||||||
Sbjct: 234 gcaaggaacttcacacagtcctcatcactcccagtggtgcagcac 190
>gb|CK193680.1|CK193680 FGAS002096 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 900
Score = 58.0 bits (29), Expect = 1e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 629 aggatcttcacacagtcgtcgtcactccagtggtgcagcac 669
>gb|CK198244.1|CK198244 FGAS006728 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 836
Score = 58.0 bits (29), Expect = 1e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
|||||||||| ||||||||||| |||||||||||||||||
Sbjct: 761 aggatcttcatgcagtcctcattcctccagtggtgcagcac 801
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 526 gacacctcgagctcccagtttcttcacaagtttgtagtcactgaatcctgc 576
>gb|BJ282781.1|BJ282781 BJ282781 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr12d10 3', mRNA sequence
Length = 586
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 431 gacacctcgagctcccagtttcttcacaagtttgtagtcactgaatcctgc 481
>gb|CA614079.1|CA614079 wr1.pk0158.b9 wr1 Triticum aestivum cDNA clone wr1.pk0158.b9 5'
end, mRNA sequence
Length = 383
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 202 gacacctcgagctcccagtttcttcaaaagtttgtagtcactgaatcctgc 152
>gb|CA639765.1|CA639765 wre1n.pk0027.h5 wre1n Triticum aestivum cDNA clone wre1n.pk0027.h5
5' end, mRNA sequence
Length = 583
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 245 gacacctcgagctcccagtttcttcacaagtttgtagtcactgaatcctgc 195
Score = 54.0 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 576 ttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttca 630
||||||||||||||||| ||||| || |||||| |||| | |||||||||||||
Sbjct: 55 ttccctccctcttcccgcgaagggatggccttcttgcattgagcaaggatcttca 1
>gb|CA652356.1|CA652356 wre1n.pk158.c6 wre1n Triticum aestivum cDNA clone wre1n.pk158.c6 5'
end, mRNA sequence
Length = 514
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 66 gacacctcgagctcccagtttcttcaaaagtttgtagtcactgaatcctgc 16
>gb|CD867175.1|CD867175 AZO2.105J01R010327 AZO2 Triticum aestivum cDNA clone AZO2105J01,
mRNA sequence
Length = 418
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 353 gacacctcgagctcccagtttcttcaaaagtttgtagtcactgaatcctgc 403
>gb|CD867532.1|CD867532 AZO2.106I14F001124 AZO2 Triticum aestivum cDNA clone AZO2106I14,
mRNA sequence
Length = 437
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 66 gacacctcgagctcccagtttcttcaaaagtttgtagtcactgaatcctgc 16
>gb|CK199477.1|CK199477 FGAS007976 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 875
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 508 gacacctcgagctcccagtttcttcaaaagtttgtagtcactgaatcctgc 558
>gb|CV522317.1|CV522317 RH-074 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 264
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 383 gacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgc 433
||||||||||||||| | |||||||| || |||||||||||||| |||||
Sbjct: 150 gacacctcgagctcccagtttcttcaaaagtttgtagtcactgaatcctgc 100
>gb|BJ285704.1|BJ285704 BJ285704 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr9j05 3', mRNA sequence
Length = 695
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
||||||||||| || || || ||||||||||||||||||||
Sbjct: 457 aggatcttcacacaatcgtcgtcactccagtggtgcagcac 497
>gb|BJ286081.1|BJ286081 BJ286081 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr19c18 3', mRNA sequence
Length = 592
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
|||||||||||||| || || ||||| || || ||| | || | || |||||||||||
Sbjct: 401 accttccctccctcctcgcgggaaggaatggcattcttacattgggttaggatcttcaca 460
Query: 633 cagtcctcatcactccagtggtgcagcac 661
|| || || ||||||||||||||||||||
Sbjct: 461 caatcgtcgtcactccagtggtgcagcac 489
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 414 ttgtagtcactgaaacctgctttctggatgaggtcacgccagtcatt 460
|||||||| |||| ||||||||| || ||||||||||||||||||
Sbjct: 242 ttgtagtcggtgaagcctgctttcatgaagaggtcacgccagtcatt 288
>gb|BJ287392.1|BJ287392 BJ287392 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr25p02 3', mRNA sequence
Length = 655
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
|||||||||||||| || || ||||| || || ||| | || | || |||||||||||
Sbjct: 402 accttccctccctcctcgcgggaaggaatggcattcttacattgggttaggatcttcaca 461
Query: 633 cagtcctcatcactccagtggtgcagcac 661
|| || || ||||||||||||||||||||
Sbjct: 462 caatcgtcgtcactccagtggtgcagcac 490
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 414 ttgtagtcactgaaacctgctttctggatgaggtcacgccagtcatt 460
|||||||| |||| ||||||||| || ||||||||||||||||||
Sbjct: 243 ttgtagtcggtgaagcctgctttcatgaagaggtcacgccagtcatt 289
>gb|BQ162424.1|BQ162424 WHE0416_a11_b22zT Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0416_a11_b22, mRNA
sequence
Length = 540
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
||||||||||| || || || ||||||||||||||||||||
Sbjct: 467 aggatcttcacacaatcgtcgtcactccagtggtgcagcac 507
>gb|CA614336.1|CA614336 wr1.pk0159.c10 wr1 Triticum aestivum cDNA clone wr1.pk0159.c10 5'
end, mRNA sequence
Length = 371
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
||||||||||| || || || ||||||||||||||||||||
Sbjct: 174 aggatcttcacacaatcgtcgtcactccagtggtgcagcac 134
Score = 40.1 bits (20), Expect = 0.24
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 429 cctgctttctggatgaggtcacgccagtcatt 460
||||||||| || ||||||||||||||||||
Sbjct: 368 cctgctttcatgaagaggtcacgccagtcatt 337
>gb|CA628533.1|CA628533 wle1n.pk0001.g12 wle1n Triticum aestivum cDNA clone
wle1n.pk0001.g12 5' end, mRNA sequence
Length = 424
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
|||||||||||||| || || ||||| || || ||| | || | || |||||||||||
Sbjct: 186 accttccctccctcctcgcgggaaggaatggcattcttacattgggttaggatcttcaca 127
Query: 633 cagtcctcatcactccagtggtgcagcac 661
|| || || ||||||||||||||||||||
Sbjct: 126 caatcgtcgtcactccagtggtgcagcac 98
>gb|CA645860.1|CA645860 wre1n.pk0101.b3 wre1n Triticum aestivum cDNA clone wre1n.pk0101.b3
5' end, mRNA sequence
Length = 503
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
|||||||||||||| || || ||||| || || ||| | || | || |||||||||||
Sbjct: 98 accttccctccctcctcgcgggaaggaatggcattcttacattgggttaggatcttcaca 39
Query: 633 cagtcctcatcactccagtggtgcagcac 661
|| || || ||||||||||||||||||||
Sbjct: 38 caatcgtcgtcactccagtggtgcagcac 10
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 414 ttgtagtcactgaaacctgctttctggatgaggtcacgccagtcatt 460
|||||||| |||| ||||||||| || ||||||||||||||||||
Sbjct: 257 ttgtagtcggtgaagcctgctttcatgaagaggtcacgccagtcatt 211
>gb|CD877656.1|CD877656 AZO4.100M18F010925 AZO4 Triticum aestivum cDNA clone AZO4100M18,
mRNA sequence
Length = 787
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
||||||||||| || || || ||||||||||||||||||||
Sbjct: 454 aggatcttcacacaatcgtcgtcactccagtggtgcagcac 414
>gb|CD877657.1|CD877657 AZO4.100M18R011122 AZO4 Triticum aestivum cDNA clone AZO4100M18,
mRNA sequence
Length = 741
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
||||||||||| || || || ||||||||||||||||||||
Sbjct: 467 aggatcttcacacaatcgtcgtcactccagtggtgcagcac 507
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 148,237
Number of Sequences: 636343
Number of extensions: 148237
Number of successful extensions: 44018
Number of sequences better than 0.5: 117
Number of HSP's better than 0.5 without gapping: 115
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 43752
Number of HSP's gapped (non-prelim): 260
length of query: 847
length of database: 367,240,239
effective HSP length: 19
effective length of query: 828
effective length of database: 355,149,722
effective search space: 294063969816
effective search space used: 294063969816
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)