BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2763196.2.1
(2766 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ620361.1|BQ620361 TaLr1167E08R TaLr1 Triticum aestivum... 533 e-149
gb|BG906591.1|BG906591 TaLr1150H08R TaLr1 Triticum aestivum... 492 e-137
gb|AL825323.1|AL825323 AL825323 p:335 Triticum aestivum cDN... 404 e-110
gb|BJ283438.1|BJ283438 BJ283438 Y. Ogihara unpublished cDNA... 196 6e-048
gb|BQ619769.1|BQ619769 TaLr1167E08F TaLr1 Triticum aestivum... 190 4e-046
gb|BJ278389.1|BJ278389 BJ278389 Y. Ogihara unpublished cDNA... 174 2e-041
gb|BG906592.1|BG906592 TaLr1150H08F TaLr1 Triticum aestivum... 147 5e-033
gb|CA665931.1|CA665931 wlk1.pk0023.b5 wlk1 Triticum aestivu... 133 7e-029
gb|CA612994.1|CA612994 wr1.pk0153.e6 wr1 Triticum aestivum ... 111 3e-022
gb|CD938553.1|CD938553 OV.110E23F010309 OV Triticum aestivu... 100 1e-018
gb|BE404614.1|BE404614 WHE0445_D02_G03ZS Wheat etiolated se... 90 1e-015
gb|CA501950.1|CA501950 WHE4040_G04_N08ZT Wheat meiotic anth... 76 1e-011
gb|BJ270186.1|BJ270186 BJ270186 Y. Ogihara unpublished cDNA... 68 4e-009
gb|BJ275186.1|BJ275186 BJ275186 Y. Ogihara unpublished cDNA... 68 4e-009
gb|CK213103.1|CK213103 FGAS025005 Triticum aestivum FGAS: L... 66 1e-008
gb|CA742818.1|CA742818 wri1s.pk004.p7 wri1s Triticum aestiv... 64 6e-008
gb|CV774393.1|CV774393 FGAS068791 Triticum aestivum FGAS: L... 54 5e-005
gb|BE591211.1|BE591211 WHE1655-1658_G11_G11ZS Wheat heat st... 52 2e-004
gb|CD453391.1|CD453391 WHE1655-1658_G11_G11ZT CS wheat heat... 52 2e-004
gb|BE497056.1|BE497056 WHE0763_G10_M19ZS Wheat heat-stresse... 50 8e-004
gb|BQ806074.1|BQ806074 WHE3574_E07_J14ZS Wheat developing g... 50 8e-004
gb|BQ839419.1|BQ839419 WHE4165_H06_P11ZS Wheat CS whole pla... 50 8e-004
gb|CD900099.1|CD900099 G174.114H20R011120 G174 Triticum aes... 50 8e-004
gb|CD936827.1|CD936827 OV.105D20F010212 OV Triticum aestivu... 50 8e-004
gb|CD937444.1|CD937444 OV.107A05F010206 OV Triticum aestivu... 50 8e-004
gb|CK210250.1|CK210250 FGAS022051 Triticum aestivum FGAS: L... 50 8e-004
gb|AJ611139.1|AJ611139 AJ611139 Triticum turgidum subsp. du... 50 8e-004
gb|AJ611919.1|AJ611919 AJ611919 Triticum turgidum subsp. du... 50 8e-004
gb|AW447959.1|AW447959 BRY_1122 BRY Triticum aestivum cDNA ... 48 0.003
gb|BQ605625.1|BQ605625 BRY_1122 wheat EST endosperm library... 48 0.003
gb|CA744867.1|CA744867 wri1s.pk009.a20 wri1s Triticum aesti... 48 0.003
gb|CD900234.1|CD900234 G174.114O12F010824 G174 Triticum aes... 48 0.003
gb|CD938046.1|CD938046 OV.108O15F010206 OV Triticum aestivu... 48 0.003
gb|BJ256102.1|BJ256102 BJ256102 Y. Ogihara unpublished cDNA... 46 0.013
gb|BJ261637.1|BJ261637 BJ261637 Y. Ogihara unpublished cDNA... 46 0.013
gb|BJ244415.1|BJ244415 BJ244415 Y. Ogihara unpublished cDNA... 44 0.051
gb|BJ248469.1|BJ248469 BJ248469 Y. Ogihara unpublished cDNA... 44 0.051
gb|CA502566.1|CA502566 WHE4302_A06_A12ZS Wheat meiotic anth... 44 0.051
gb|CA678684.1|CA678684 wlm4.pk0009.g4 wlm4 Triticum aestivu... 44 0.051
gb|CA727034.1|CA727034 wde1f.pk002.l23 wde1f Triticum aesti... 44 0.051
gb|DR736707.1|DR736707 FGAS082077 Triticum aestivum FGAS: L... 44 0.051
emb|AX660687.1| Sequence 1044 from Patent WO03000906 44 0.051
emb|AX660698.1| Sequence 1055 from Patent WO03000906 44 0.051
gb|BE400183.1|BE400183 AWB011.G11F000328 ITEC AWB Wheat Mei... 42 0.20
gb|CD866512.1|CD866512 AZO2.103K14F001107 AZO2 Triticum aes... 42 0.20
gb|CD871658.1|CD871658 AZO2.118M05F010207 AZO2 Triticum aes... 42 0.20
gb|CD873873.1|CD873873 AZO3.100O05F010924 AZO3 Triticum aes... 42 0.20
gb|CD875567.1|CD875567 AZO3.105N19F011002 AZO3 Triticum aes... 42 0.20
gb|CD917111.1|CD917111 G608.104A24F010904 G608 Triticum aes... 42 0.20
gb|CK161382.1|CK161382 FGAS013950 Triticum aestivum FGAS: L... 42 0.20
gb|CK163309.1|CK163309 FGAS015931 Triticum aestivum FGAS: L... 42 0.20
gb|CK204953.1|CK204953 FGAS013489 Triticum aestivum FGAS: L... 42 0.20
gb|DR732462.1|DR732462 FGAS078382 Triticum aestivum FGAS: T... 42 0.20
gb|DR741362.1|DR741362 FGAS030418 Triticum aestivum FGAS: L... 42 0.20
>gb|BQ620361.1|BQ620361 TaLr1167E08R TaLr1 Triticum aestivum cDNA clone TaLr1167E08R, mRNA
sequence
Length = 608
Score = 533 bits (269), Expect = e-149
Identities = 514/596 (86%)
Strand = Plus / Minus
Query: 509 cgttccattgccgccacgcatatccagcgatgttcaaggagtcctcgtgacagtggaagc 568
|||||||||| |||| |||||||| |||||||| | ||| |||| || | || |||
Sbjct: 608 cgttccattgttgccatgcatatcccgcgatgtttagggactcctgctggccatganagc 549
Query: 569 tcacagccctctttcctgtgatgatctccaagatcaggactccgaagccatagacgtcag 628
| ||||||||||| ||||| ||||||||||||||||| |||||||||| |||||| || |
Sbjct: 548 tgacagccctcttccctgtaatgatctccaagatcagaactccgaagctatagacatcgg 489
Query: 629 acttgactgaaaaaatgccttccattgcgtattcaggagacatgtagccaaatgtaccga 688
||||||| || |||||||||||||| || || ||||| ||||||||||| ||||| ||||
Sbjct: 488 acttgaccgagaaaatgccttccatggcatactcaggggacatgtagccgaatgttccga 429
Query: 689 cgacccgattcgtgttgaattggttttggtcccctccaaacatccttgccattccaaaat 748
| || || ||||||||||| ||||||| ||||||||||| |||||||||||||| ||||
Sbjct: 428 ccacacggttcgtgttgaactggttttcatcccctccaaaaatccttgccattccgaaat 369
Query: 749 ctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacggt 808
||||||| ||||| |||||||| | ||| ||||||||||||||||||||||||||||| |
Sbjct: 368 ctgatattttggggttcatgtctgtgtctaggagaatgttgctggccttgagatcacgat 309
Query: 809 gaacaactcgcagcctcgaatcccggtggagatatagcagccctctagcaatgccttcga 868
|||||| || ||||| || |||||||||||||||||||| |||| |||||| |||||||
Sbjct: 308 gaacaatacgtagccttgagtcccggtggagatatagcagtcctcgagcaataccttcga 249
Query: 869 ttatatcaaaccgtttcttccagtctagaagccgttgcttttcaggattaaagaggaatg 928
| |||||||||| | || |||||||||| || | | |||||||||||||||||| ||||
Sbjct: 248 tgatatcaaaccttgtcctccagtctaggagacctcgcttttcaggattaaagataaatg 189
Query: 929 catctagacttttgttaggcatgtactcatacaccaggatcttctcttccctcggtatgc 988
| || || || |||||||||||||||||||| |||| |||||||||||| | | |||| |
Sbjct: 188 cgtcgaggctcttgttaggcatgtactcataaaccaagatcttctcttctccctgtatac 129
Query: 989 agcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagtatgacctcat 1048
|||| ||| |||||| |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 128 agcaggctaatagtctgacaagattccggtgctgcaactttgcaatcagtatgacctcat 69
Query: 1049 tcttgaattcttcaaggccttgacctgaattcctacaaagcctcttcacagctact 1104
||||||| || ||| ||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 68 tcttgaactcctcatggccttgacctgagttcttacaaagcctcttcacagctact 13
>gb|BG906591.1|BG906591 TaLr1150H08R TaLr1 Triticum aestivum cDNA clone TaLr1150H08 5', mRNA
sequence
Length = 645
Score = 492 bits (248), Expect = e-137
Identities = 458/528 (86%)
Strand = Plus / Minus
Query: 718 tcccctccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtcc 777
||||||||||| |||||||||||||| ||||||||||| ||||| |||||||| | |||
Sbjct: 638 tcccctccaaaaatccttgccattccgaaatctgatattttggggttcatgtctgtgtct 579
Query: 778 aggagaatgttgctggccttgagatcacggtgaacaactcgcagcctcgaatcccggtgg 837
||||||||| ||||||||||||||||||| ||||||| || ||||| || |||||||||
Sbjct: 578 aggagaatggtgctggccttgagatcacgatgaacaatacgtagccttgagtcccggtgg 519
Query: 838 agatatagcagccctctagcaatgccttcgattatatcaaaccgtttcttccagtctaga 897
||||||||||| |||| |||||| |||||||| |||||||||| | || ||||||||||
Sbjct: 518 agatatagcagtcctcgagcaataccttcgatgatatcaaaccttgtcctccagtctagg 459
Query: 898 agccgttgcttttcaggattaaagaggaatgcatctagacttttgttaggcatgtactca 957
|| | | |||||||||||||||||| ||||| || || || ||||||||||||||||||
Sbjct: 458 agacctcgcttttcaggattaaagataaatgcgtcgaggctcttgttaggcatgtactca 399
Query: 958 tacaccaggatcttctcttccctcggtatgcagcaccctagtagtcttacaagattgcgg 1017
|| |||| |||||||||||| | | |||| ||||| ||| |||||| |||||||| |||
Sbjct: 398 taaaccaagatcttctcttctccctgtatacagcaagctaatagtctgacaagattccgg 339
Query: 1018 tgctgcaactttgcaataagtatgacctcattcttgaattcttcaaggccttgacctgaa 1077
||||||||||||||||| |||||||||||||||||||| || ||| |||||||||||||
Sbjct: 338 tgctgcaactttgcaatcagtatgacctcattcttgaactcctcatggccttgacctgag 279
Query: 1078 ttcctacaaagcctcttcacagctacttcttctcccccaggtaaagttcccatatagaca 1137
||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 278 ttcttacaaagcctcttcacagctacttcttctccaccaggtaatgttcccatataaacc 219
Query: 1138 ggaccaaatcctccttctccaagcttgttagagtcactaaaattacttgtagcagttctt 1197
|| |||||||| ||||| ||||||||||| || ||||| ||| ||| ||||||| | |
Sbjct: 218 gggccaaatccaccttccccaagcttgttggattcactgaaactaccagtagcagcttta 159
Query: 1198 atacggtccagcgagtacactttgagttcatgactttttccatcctcc 1245
|| |||||||| ||| ||||||||||||||||||||||| ||||||
Sbjct: 158 atgcggtccagggagagtactttgagttcatgactttttccgtcctcc 111
>gb|AL825323.1|AL825323 AL825323 p:335 Triticum aestivum cDNA clone D10_p335_plate_8, mRNA
sequence
Length = 428
Score = 404 bits (204), Expect = e-110
Identities = 371/427 (86%)
Strand = Plus / Minus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgtagccaaatgtaccg 687
|||||||| || ||||||||||||| ||||| ||||||||||||||||| ||||| | |
Sbjct: 427 gacttgaccgagaaaatgccttccacggcgtactcaggagacatgtagccgaatgttcgg 368
Query: 688 acgacccgattcgtgttgaattggttttggtcccctccaaacatccttgccattccaaaa 747
|| || || ||||||||||| ||||||| ||||||||||| |||||||||||||| |||
Sbjct: 367 accacacggttcgtgttgaactggttttcatcccctccaaagatccttgccattccgaaa 308
Query: 748 tctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacgg 807
|||||||| ||||| |||||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 307 tctgatattttggggttcatgtctgtgtctaggagaatgttgctggccttgagatcacga 248
Query: 808 tgaacaactcgcagcctcgaatcccggtggagatatagcagccctctagcaatgccttcg 867
||||||| || ||||| || |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 247 tgaacaatacgtagccttgagtcccggtggagatatagcagtcctcgagcaataccttcg 188
Query: 868 attatatcaaaccgtttcttccagtctagaagccgttgcttttcaggattaaagaggaat 927
|| |||||||||| | ||||||||||||| || | | |||||||||||||||||| |||
Sbjct: 187 atgatatcaaaccttgtcttccagtctaggagacctcgcttttcaggattaaagataaat 128
Query: 928 gcatctagacttttgttaggcatgtactcatacaccaggatcttctcttccctcggtatg 987
|| || || || |||| ||||||||||||||| |||| |||||||||||| | | ||||
Sbjct: 127 gcgtcgaggctcttgtnaggcatgtactcataaaccaagatcttctcttctccctgtata 68
Query: 988 cagcaccctagtagtcttacaagattgcggtgctgcaactttgcaataagtatgacctca 1047
||||| ||| |||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 67 cagcaagctaatagtctcacaagattccggtgctgcaactttgcaatcagtatgacctca 8
Query: 1048 ttcttga 1054
|||||||
Sbjct: 7 ttcttga 1
>gb|BJ283438.1|BJ283438 BJ283438 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr15p12 3', mRNA sequence
Length = 677
Score = 196 bits (99), Expect = 6e-048
Identities = 321/395 (81%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
|||||||||||||||||||||||| || || |||||||||||||||| || |||||||
Sbjct: 283 atcttccatgcaactgtgtcattgatacggtaccaatggagtggctcctctcgttctcgc 342
Query: 281 ttgacttgctggattcgatctcacggcctcgaagcatcagcgtaggcggcctcggattag 340
|||| ||||| || || | ||||||| || |||||||| || |||| |||||| | |
Sbjct: 343 ttgatttgctcgactcaagagcacggccacggagcatcagggtgggcgccctcggcatgg 402
Query: 341 gaaggctcgagctgtcgttgctcagcataaggatgacagtggggatgtcaggtcgctcat 400
||||||| |||||||| |||||| ||| |||||||| | ||| | ||| || ||||| |
Sbjct: 403 gaaggctggagctgtcactgctcaacatcaggatgaccgcgggcacgtccggacgctctt 462
Query: 401 ctgcgtgatcttgcacgcacagcaacgcaatatggatgcatctcagcacctgccgaactg 460
|| |||||||||||||| ||||| ||||| |||||||| ||||| ||||| |||| |
Sbjct: 463 gggcatgatcttgcacgcatagcaatgcaatgtggatgcacctcaggacctgtcgaatcg 522
Query: 461 agcacgatgctcttatcactggatcgatcagctccgcagcattgtcttcgttccattgcc 520
||||||| | | |||||| || ||||||| ||| | | |||||||||||||||||
Sbjct: 523 agcacgacggttttatcaacgggtcgatcatgtcctcgcccttgtcttcgttccattgtt 582
Query: 521 gccacgcatatccagcgatgttcaaggagtcctcgtgacagtggaagctcacagccctct 580
|||| |||||||| |||||||| | ||| |||| || | || ||||| ||||||||||
Sbjct: 583 gccatgcatatcccgcgatgtttagggactcctgctggccatgaaagctgacagccctct 642
Query: 581 ttcctgtgatgatctccaagatcaggactccgaag 615
| ||||| ||||||||||||||||| |||||||||
Sbjct: 643 tccctgtaatgatctccaagatcagaactccgaag 677
>gb|BQ619769.1|BQ619769 TaLr1167E08F TaLr1 Triticum aestivum cDNA clone TaLr1167E08F, mRNA
sequence
Length = 576
Score = 190 bits (96), Expect = 4e-046
Identities = 318/392 (81%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
|||||||||||||||||||||||| || || |||||||||||||||| || |||||||
Sbjct: 185 atcttccatgcaactgtgtcattgatacggtaccaatggagtggctcctctcgttctcgc 244
Query: 281 ttgacttgctggattcgatctcacggcctcgaagcatcagcgtaggcggcctcggattag 340
|||| ||||| || || | ||||||| || |||||||| || |||| |||||| | |
Sbjct: 245 ttgatttgctcgactcaagagcacggccacggagcatcagggtgggcgccctcggcatgg 304
Query: 341 gaaggctcgagctgtcgttgctcagcataaggatgacagtggggatgtcaggtcgctcat 400
||||||| |||||||| |||||| ||| |||||||| | ||| | ||| || ||||| |
Sbjct: 305 gaaggctggagctgtcactgctcaacatcaggatgaccgcgggcacgtccggacgctctt 364
Query: 401 ctgcgtgatcttgcacgcacagcaacgcaatatggatgcatctcagcacctgccgaactg 460
|| |||||||||||||| ||||| ||||| |||||||| ||||| ||||| |||| |
Sbjct: 365 gggcatgatcttgcacgcatagcaatgcaatgtggatgcacctcaggacctgtcgaatcg 424
Query: 461 agcacgatgctcttatcactggatcgatcagctccgcagcattgtcttcgttccattgcc 520
||||||| | | |||||| || ||||||| ||| | | |||||||||||||||||
Sbjct: 425 agcacgacggttttatcaacgggtcgatcatgtcctcgcccttgtcttcgttccattgtt 484
Query: 521 gccacgcatatccagcgatgttcaaggagtcctcgtgacagtggaagctcacagccctct 580
|||| |||||||| |||||||| | ||| |||| || | || ||||| ||||||||||
Sbjct: 485 gccatgcatatcccgcgatgtttagggactcctgctggccatgaaagctgacagccctct 544
Query: 581 ttcctgtgatgatctccaagatcaggactccg 612
| ||||| ||||||||||||||||| ||||||
Sbjct: 545 tccctgtaatgatctccaagatcagaactccg 576
>gb|BJ278389.1|BJ278389 BJ278389 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr15p12 5', mRNA sequence
Length = 657
Score = 174 bits (88), Expect = 2e-041
Identities = 396/496 (79%), Gaps = 2/496 (0%)
Strand = Plus / Minus
Query: 1732 caaccttgactccaatttcctgcattccactgctcctgc-aacttcggatgaaaaccttt 1790
||||| || |||| ||||||||||||||||| || ||| ||||| || | |||||||||
Sbjct: 587 caaccctggctccgatttcctgcattccactcatc-tgctaactttggcttaaaaccttt 529
Query: 1791 taggcaggtgcattttgccttgccatcttgcgatgcagtgcattttgcatttggaccaca 1850
| |||||| ||||||||||| ||||||||| | || ||| | ||||||| ||||||
Sbjct: 528 catgcaggtacattttgccttcccatcttgcaccaccgtacatatcgcatttgaaccaca 469
Query: 1851 tgtagcatagtattcacactcatttgatggttggtaccagacaagctcccaatcttgtga 1910
|| | |||| || ||||||||||| ||||| ||| ||| ||||| || ||||
Sbjct: 468 tgcaccataacgctcgcactcatttgacggttgcacccacacagtttcccactcctgtgt 409
Query: 1911 agattttctaaccatgtagcagatgtctgtgccatttggcaaaacaacaaacctctgcaa 1970
||| || ||||||||||||||| |||| |||||| |||| |||||||||||||||||
Sbjct: 408 agacttcttaaccatgtagcagacgtctctgccatctggcgcaacaacaaacctctgcag 349
Query: 1971 agaagtgtttgttgcagtgtatgtgtaataatttccaagcactggatcaattgccggtgt 2030
||| || |||||||||||||| ||| | || |||| || | ||||||| || | || |
Sbjct: 348 agatgtatttgttgcagtgtaagtgaagtacattcccaggattggatcatttccttgttt 289
Query: 2031 gaacccactcctgtagagtggcctccatggaatgcctataaaattcaccccattccactg 2090
| ||||| | ||| | |||||| ||||||| |||| |||||| | |||| |||| ||
Sbjct: 288 gtacccatacacgtacaatggcctatatggaattcctacaaaatttagcccagtccattg 229
Query: 2091 tcccgacctccagtacgtaacgttgccatctttccagatgtaggcctgaccggagttgcc 2150
|||||||||||| | | |||||| || ||| |||||||| |||| || | || |||| |
Sbjct: 228 gcccgacctccagaatggaacgtttccgtctctccagatgaaggcttggctggggttggc 169
Query: 2151 cgggtcgaggccgagcgcgtatcgccccggcgaagggtccgtctcgctggcccaggacgt 2210
||||||||||||||||||| | || |||||||| |||||||| |||||||||||||| ||
Sbjct: 168 cgggtcgaggccgagcgcgaaccggcccggcgaggggtccgtgtcgctggcccaggaggt 109
Query: 2211 gaacagcatccgctcc 2226
||| ||||||||||||
Sbjct: 108 gaagagcatccgctcc 93
Score = 61.9 bits (31), Expect = 2e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 2255 tgatgcgcatcccggacaggatggtgtccgtcgggtgccagaagctgtccc 2305
|||||||||||||||| || |||||||| | |||||||||||||||||||
Sbjct: 52 tgatgcgcatcccggagagcatggtgtcggatgggtgccagaagctgtccc 2
>gb|BG906592.1|BG906592 TaLr1150H08F TaLr1 Triticum aestivum cDNA clone TaLr1150H08 3',
mRNA sequence
Length = 475
Score = 147 bits (74), Expect = 5e-033
Identities = 221/270 (81%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
|||||||||||||||||||||||| || ||||||||||||||||||| || |||||||
Sbjct: 198 atcttccatgcaactgtgtcattgatacggtgccaatggagtggctcctctcgttctcgc 257
Query: 281 ttgacttgctggattcgatctcacggcctcgaagcatcagcgtaggcggcctcggattag 340
|||| ||||| || || | ||||||| || |||||||| || |||| |||||| | |
Sbjct: 258 ttgatttgctcgactcaagagcacggccacggagcatcagggtgggcgccctcggcatgg 317
Query: 341 gaaggctcgagctgtcgttgctcagcataaggatgacagtggggatgtcaggtcgctcat 400
||||||| ||||||||| |||||| ||| |||||||| | || | ||| || ||||| |
Sbjct: 318 gaaggctggagctgtcgctgctcaacatcaggatgaccgccggcacgtccggacgctctt 377
Query: 401 ctgcgtgatcttgcacgcacagcaacgcaatatggatgcatctcagcacctgccgaactg 460
|| |||||||||||||| ||||| ||||| |||||||| ||||| ||||| |||| |
Sbjct: 378 gggcatgatcttgcacgcatagcaatgcaatgtggatgcacctcaggacctgtcgaatcg 437
Query: 461 agcacgatgctcttatcactggatcgatca 490
||||||| | | |||||| ||||||||||
Sbjct: 438 agcacgacggttttatcaacggatcgatca 467
>gb|CA665931.1|CA665931 wlk1.pk0023.b5 wlk1 Triticum aestivum cDNA clone wlk1.pk0023.b5 5'
end, mRNA sequence
Length = 427
Score = 133 bits (67), Expect = 7e-029
Identities = 202/247 (81%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
|||||||||||||||||||||||| || ||||||||||||||||||| || |||||||
Sbjct: 161 atcttccatgcaactgtgtcattgatacggtgccaatggagtggctcctctcgttctcgc 220
Query: 281 ttgacttgctggattcgatctcacggcctcgaagcatcagcgtaggcggcctcggattag 340
|||| ||||| || || | ||||||| || |||||||| || |||| |||||| | |
Sbjct: 221 ttgatttgctcgactcaagagcacggccacggagcatcagggtgggcgccctcggcatgg 280
Query: 341 gaaggctcgagctgtcgttgctcagcataaggatgacagtggggatgtcaggtcgctcat 400
||||||| ||||||||| |||||| ||| |||||||| | || | ||| || ||||| |
Sbjct: 281 gaaggctggagctgtcgctgctcaacatcaggatgaccgccggcacgtccggacgctctt 340
Query: 401 ctgcgtgatcttgcacgcacagcaacgcaatatggatgcatctcagcacctgccgaactg 460
|| |||||||||||||| ||||| ||||| |||||||| |||| ||||| |||| |
Sbjct: 341 gggcatgatcttgcacgcatagcaatgcaatgtggatgcacctcaagacctgtcgaatcg 400
Query: 461 agcacga 467
|||||||
Sbjct: 401 agcacga 407
>gb|CA612994.1|CA612994 wr1.pk0153.e6 wr1 Triticum aestivum cDNA clone wr1.pk0153.e6 5'
end, mRNA sequence
Length = 465
Score = 111 bits (56), Expect = 3e-022
Identities = 192/236 (81%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 232 aactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgcttgacttgctg 291
|||||||||||||| || || |||||||||||||||| || ||||||||||| |||||
Sbjct: 266 aactgtgtcattgt-acggtaccaatggagtggctcctctcgttctcgcttgatttgctc 208
Query: 292 gattcgatctcacggcctcgaagcatcagcgtaggcggcctcggattaggaaggctcgag 351
|| || | ||||||| || |||||||| || |||| |||||| | |||||||| |||
Sbjct: 207 gactcaagagcacggccacggagcatcagggtgggcgccctcggcatgggaaggctggag 148
Query: 352 ctgtcgttgctcagcataaggatgacagtggggatgtcaggtcgctcatctgcgtgatct 411
||||| |||||| ||| |||||||| | ||| | ||| || ||||| | || ||||||
Sbjct: 147 ctgtcactgctcaacatcaggatgaccgcgggcacgtccggacgctcttgggcatgatct 88
Query: 412 tgcacgcacagcaacgcaatatggatgcatctcagcacctgccgaactgagcacga 467
|||||||| ||||| ||||| |||||||| ||||| ||||| |||| ||||||||
Sbjct: 87 tgcacgcatagcaatgcaatgtggatgcacctcaggacctgtcgaatcgagcacga 32
>gb|CD938553.1|CD938553 OV.110E23F010309 OV Triticum aestivum cDNA clone OV110E23, mRNA
sequence
Length = 727
Score = 99.6 bits (50), Expect = 1e-018
Identities = 203/254 (79%)
Strand = Plus / Minus
Query: 586 gtgatgatctccaagatcaggactccgaagccatagacgtcagacttgactgaaaaaatg 645
||||||||||||| |||||||| ||||||| || ||||| ||| | || || || | |
Sbjct: 503 gtgatgatctccaggatcaggatgccgaagctgtacacgtcggacctcaccgagaacagg 444
Query: 646 ccttccattgcgtattcaggagacatgtagccaaatgtaccgacgacccgattcgtgttg 705
|| ||||||||||| || || ||||||||||| | ||| |||||||| || || |||||
Sbjct: 443 ccctccattgcgtactccggcgacatgtagcctagtgtgccgacgacgcggttggtgttc 384
Query: 706 aattggttttggtcccctccaaacatccttgccattccaaaatctgatatcttgggtttc 765
||||| | ||| || || || ||||| ||||| || || || ||||||||||| |||
Sbjct: 383 tcctggttcttgtcgccgccgaagatcctggccatgccgaagtcggatatcttggggttc 324
Query: 766 atgtccgcgtccaggagaatgttgctggccttgagatcacggtgaacaactcgcagcctc 825
|| || ||||||||| ||||||||||||||||| || ||||| || || || ||||||
Sbjct: 323 atctcgtggtccaggaggatgttgctggccttgaggtcccggtgcaccacgcggagcctc 264
Query: 826 gaatcccggtggag 839
|| |||||||||||
Sbjct: 263 gagtcccggtggag 250
>gb|BE404614.1|BE404614 WHE0445_D02_G03ZS Wheat etiolated seedling root cDNA library Triticum
aestivum cDNA clone WHE0445_D02_G03, mRNA sequence
Length = 557
Score = 89.7 bits (45), Expect = 1e-015
Identities = 209/261 (80%), Gaps = 2/261 (0%)
Strand = Plus / Minus
Query: 1732 caaccttgactccaatttcctgcattccactgctcctgc-aacttcggatgaaaaccttt 1790
||||| || |||| ||||||||||||||||| || ||| ||||| || | |||||||||
Sbjct: 329 caaccctggctccgatttcctgcattccactcatc-tgctaactttggcttaaaaccttt 271
Query: 1791 taggcaggtgcattttgccttgccatcttgcgatgcagtgcattttgcatttggaccaca 1850
| |||||| ||||||||||| ||||||||| | || ||| | ||||||| ||||||
Sbjct: 270 catgcaggtacattttgccttcccatcttgcaccaccgtacatatcgcatttgaaccaca 211
Query: 1851 tgtagcatagtattcacactcatttgatggttggtaccagacaagctcccaatcttgtga 1910
|| | |||| || ||||||||||| ||||| ||| ||| ||||| || ||||
Sbjct: 210 tgcaccataacgctcgcactcatttgacggttgcacccacacagtttcccactcctgtgt 151
Query: 1911 agattttctaaccatgtagcagatgtctgtgccatttggcaaaacaacaaacctctgcaa 1970
||| || ||||||||||||||| |||| |||||| |||| |||||||||||||||||
Sbjct: 150 agacttcttaaccatgtagcagacgtctctgccatctggcgcaacaacaaacctctgcag 91
Query: 1971 agaagtgtttgttgcagtgta 1991
||| || ||||||||||||||
Sbjct: 90 agatgtatttgttgcagtgta 70
>gb|CA501950.1|CA501950 WHE4040_G04_N08ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4040_G04_N08, mRNA sequence
Length = 318
Score = 75.8 bits (38), Expect = 1e-011
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtggctccggtccttctcgc 280
|||||||||||||||||||||||| || || |||||||||||||||| || |||||||
Sbjct: 112 atcttccatgcaactgtgtcattgatacggtaccaatggagtggctcctctcgttctcgc 53
Query: 281 ttgacttgct 290
|||| |||||
Sbjct: 52 ttgatttgct 43
>gb|BJ270186.1|BJ270186 BJ270186 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh6g21 5', mRNA sequence
Length = 728
Score = 67.9 bits (34), Expect = 4e-009
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 742 ccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgaga 801
||||||||||| || || || ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 102 ccaaaatctgaaattttaggattcatgtcctggtccaagagaatgttgctggccttgaga 43
Query: 802 tc 803
||
Sbjct: 42 tc 41
>gb|BJ275186.1|BJ275186 BJ275186 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh6g21 3', mRNA sequence
Length = 714
Score = 67.9 bits (34), Expect = 4e-009
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 742 ccaaaatctgatatcttgggtttcatgtccgcgtccaggagaatgttgctggccttgaga 801
||||||||||| || || || ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 614 ccaaaatctgaaattttaggattcatgtcctggtccaagagaatgttgctggccttgaga 673
Query: 802 tc 803
||
Sbjct: 674 tc 675
>gb|CK213103.1|CK213103 FGAS025005 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1051
Score = 65.9 bits (33), Expect = 1e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgcgtccaggaga 783
||||| |||||||||||||||||||||||||| || || ||||| ||| |||| || ||
Sbjct: 724 ccaaagatccttgccattccaaaatctgatatttttgggttcatctccacgtctagcagg 783
Query: 784 atgttgctggccttgag 800
|||||||| | ||||||
Sbjct: 784 atgttgcttggcttgag 800
Score = 46.1 bits (23), Expect = 0.013
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 628 gacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||| ||||||||||| ||||| || || ||||| ||||||||
Sbjct: 628 gacttgacggaaaaaatgccctccatcgcatactcaggcgacatgta 674
>gb|CA742818.1|CA742818 wri1s.pk004.p7 wri1s Triticum aestivum cDNA clone wri1s.pk004.p7 5'
end, mRNA sequence
Length = 229
Score = 63.9 bits (32), Expect = 6e-008
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 221 atcttccatgcaactgtgtcattgtcacagtgccaatggagtgg 264
|||||||||||||||||||||||| || |||||||||||||||
Sbjct: 156 atcttccatgcaactgtgtcattgatacggtgccaatggagtgg 199
>gb|CV774393.1|CV774393 FGAS068791 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 851
Score = 54.0 bits (27), Expect = 5e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 612 gtcagacttgactgaaaaggaaccttccattgcatattcaggtgacatgta 562
Score = 44.1 bits (22), Expect = 0.051
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcatgtccgc 773
||||| ||||||||||| |||||||| ||||| || || ||||| |||||
Sbjct: 425 ccaaagatccttgccataccaaaatccgatattttagggttcatttccgc 376
>gb|BE591211.1|BE591211 WHE1655-1658_G11_G11ZS Wheat heat stressed flag leaf cDNA library
Triticum aestivum cDNA clone WHE1655-1658_G11_G11, mRNA
sequence
Length = 508
Score = 52.0 bits (26), Expect = 2e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 646 ccttccattgcgtattcaggagacatgtagccaaatgt 683
||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 73 ccttccattgcatattcaggagacatgtaaccacatgt 36
>gb|CD453391.1|CD453391 WHE1655-1658_G11_G11ZT CS wheat heat stressed flag leaf cDNA
library Triticum aestivum cDNA clone
WHE1655-1658_G11_G11, mRNA sequence
Length = 635
Score = 52.0 bits (26), Expect = 2e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 646 ccttccattgcgtattcaggagacatgtagccaaatgt 683
||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 549 ccttccattgcatattcaggagacatgtaaccacatgt 586
>gb|BE497056.1|BE497056 WHE0763_G10_M19ZS Wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0763_G10_M19, mRNA
sequence
Length = 488
Score = 50.1 bits (25), Expect = 8e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 763 ttcatgtccgcgtccaggagaatgttgctggccttga 799
|||||||| ||||||||||| | ||||||||||||||
Sbjct: 92 ttcatgtcggcgtccaggagcacgttgctggccttga 56
>gb|BQ806074.1|BQ806074 WHE3574_E07_J14ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3574_E07_J14, mRNA sequence
Length = 578
Score = 50.1 bits (25), Expect = 8e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 763 ttcatgtccgcgtccaggagaatgttgctggccttga 799
|||||||| ||||||||||| | ||||||||||||||
Sbjct: 438 ttcatgtcggcgtccaggagcacgttgctggccttga 402
>gb|BQ839419.1|BQ839419 WHE4165_H06_P11ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4165_H06_P11, mRNA sequence
Length = 637
Score = 50.1 bits (25), Expect = 8e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 763 ttcatgtccgcgtccaggagaatgttgctggccttga 799
|||||||| ||||||||||| | ||||||||||||||
Sbjct: 84 ttcatgtcggcgtccaggagcacgttgctggccttga 48
>gb|CD900099.1|CD900099 G174.114H20R011120 G174 Triticum aestivum cDNA clone G174114H20,
mRNA sequence
Length = 671
Score = 50.1 bits (25), Expect = 8e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 765 catgtccgcgtccaggagaatgttgctgg 793
|||||||||||||||||| ||||||||||
Sbjct: 194 catgtccgcgtccaggaggatgttgctgg 222
>gb|CD936827.1|CD936827 OV.105D20F010212 OV Triticum aestivum cDNA clone OV105D20, mRNA
sequence
Length = 698
Score = 50.1 bits (25), Expect = 8e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 763 ttcatgtccgcgtccaggagaatgttgctggccttga 799
|||||||| ||||||||||| | ||||||||||||||
Sbjct: 534 ttcatgtcggcgtccaggagcacgttgctggccttga 498
>gb|CD937444.1|CD937444 OV.107A05F010206 OV Triticum aestivum cDNA clone OV107A05, mRNA
sequence
Length = 694
Score = 50.1 bits (25), Expect = 8e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 763 ttcatgtccgcgtccaggagaatgttgctggccttga 799
|||||||| ||||||||||| | ||||||||||||||
Sbjct: 400 ttcatgtcggcgtccaggagcacgttgctggccttga 364
>gb|CK210250.1|CK210250 FGAS022051 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1153
Score = 50.1 bits (25), Expect = 8e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 763 ttcatgtccgcgtccaggagaatgttgctggccttga 799
|||||||| ||||||||||| | ||||||||||||||
Sbjct: 205 ttcatgtcggcgtccaggagcacgttgctggccttga 169
>gb|AJ611139.1|AJ611139 AJ611139 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04361R, mRNA
sequence
Length = 665
Score = 50.1 bits (25), Expect = 8e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 763 ttcatgtccgcgtccaggagaatgttgctggccttga 799
|||||||| ||||||||||| | ||||||||||||||
Sbjct: 235 ttcatgtcggcgtccaggagcacgttgctggccttga 199
>gb|AJ611919.1|AJ611919 AJ611919 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 05880R, mRNA
sequence
Length = 562
Score = 50.1 bits (25), Expect = 8e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 763 ttcatgtccgcgtccaggagaatgttgctggccttga 799
|||||||| ||||||||||| | ||||||||||||||
Sbjct: 74 ttcatgtcggcgtccaggagcacgttgctggccttga 38
>gb|AW447959.1|AW447959 BRY_1122 BRY Triticum aestivum cDNA clone P22-2A, mRNA sequence
Length = 691
Score = 48.1 bits (24), Expect = 0.003
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctc 974
|||||||| || || || || ||||| ||||||||||| |||||||| ||||||||
Sbjct: 578 aagaggaaggcgtcgaggctcttgttgggcatgtactcgtacaccagcatcttctc 523
>gb|BQ605625.1|BQ605625 BRY_1122 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 691
Score = 48.1 bits (24), Expect = 0.003
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctc 974
|||||||| || || || || ||||| ||||||||||| |||||||| ||||||||
Sbjct: 578 aagaggaaggcgtcgaggctcttgttgggcatgtactcgtacaccagcatcttctc 523
>gb|CA744867.1|CA744867 wri1s.pk009.a20 wri1s Triticum aestivum cDNA clone wri1s.pk009.a20
5' end, mRNA sequence
Length = 673
Score = 48.1 bits (24), Expect = 0.003
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggtttcat 767
||||| ||||||||||| || ||||||||||| ||||| |||||
Sbjct: 64 ccaaagatccttgccataccgaaatctgatattttgggattcat 107
>gb|CD900234.1|CD900234 G174.114O12F010824 G174 Triticum aestivum cDNA clone G174114O12,
mRNA sequence
Length = 647
Score = 48.1 bits (24), Expect = 0.003
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctc 974
|||||||| || || || || ||||| ||||||||||| |||||||| ||||||||
Sbjct: 620 aagaggaaggcgtcgaggctcttgttgggcatgtactcgtacaccagcatcttctc 565
>gb|CD938046.1|CD938046 OV.108O15F010206 OV Triticum aestivum cDNA clone OV108O15, mRNA
sequence
Length = 683
Score = 48.1 bits (24), Expect = 0.003
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 919 aagaggaatgcatctagacttttgttaggcatgtactcatacaccaggatcttctc 974
|||||||| || || || || ||||| ||||||||||| |||||||| ||||||||
Sbjct: 471 aagaggaaggcgtcgaggctcttgttgggcatgtactcgtacaccagcatcttctc 416
>gb|BJ256102.1|BJ256102 BJ256102 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh3o19 5', mRNA sequence
Length = 639
Score = 46.1 bits (23), Expect = 0.013
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||| | | |||||| ||||||| ||||||||||||||
Sbjct: 504 gtcagacttgacagaatagaaaccttccgttgcgtactcaggagacatgta 454
>gb|BJ261637.1|BJ261637 BJ261637 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh3o19 3', mRNA sequence
Length = 653
Score = 46.1 bits (23), Expect = 0.013
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 624 gtcagacttgactgaaaaaatgccttccattgcgtattcaggagacatgta 674
|||||||||||| ||| | | |||||| ||||||| ||||||||||||||
Sbjct: 466 gtcagacttgacagaatagaaaccttccgttgcgtactcaggagacatgta 516
>gb|BJ244415.1|BJ244415 BJ244415 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf9k09 5', mRNA sequence
Length = 613
Score = 44.1 bits (22), Expect = 0.051
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2723 cgccggcgaggagcaggaagaggagc 2748
|||||| |||||||||||||||||||
Sbjct: 56 cgccggagaggagcaggaagaggagc 81
>gb|BJ248469.1|BJ248469 BJ248469 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf6h04 5', mRNA sequence
Length = 516
Score = 44.1 bits (22), Expect = 0.051
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2723 cgccggcgaggagcaggaagaggagc 2748
|||||| |||||||||||||||||||
Sbjct: 59 cgccggagaggagcaggaagaggagc 84
>gb|CA502566.1|CA502566 WHE4302_A06_A12ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4302_A06_A12, mRNA sequence
Length = 624
Score = 44.1 bits (22), Expect = 0.051
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 725 caaacatccttgccattccaaaatctgatatcttgggtttcatgtc 770
|||| ||| |||||| ||||||||||| ||||||||| |||||||
Sbjct: 305 caaaaatctttgccagaccaaaatctgaaatcttgggtctcatgtc 260
>gb|CA678684.1|CA678684 wlm4.pk0009.g4 wlm4 Triticum aestivum cDNA clone wlm4.pk0009.g4 5'
end, mRNA sequence
Length = 646
Score = 44.1 bits (22), Expect = 0.051
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 946 ggcatgtactcatacaccagga 967
||||||||||||||||||||||
Sbjct: 178 ggcatgtactcatacaccagga 157
>gb|CA727034.1|CA727034 wde1f.pk002.l23 wde1f Triticum aestivum cDNA clone wde1f.pk002.l23 5'
end, mRNA sequence
Length = 569
Score = 44.1 bits (22), Expect = 0.051
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2723 cgccggcgaggagcaggaagaggagc 2748
|||||| |||||||||||||||||||
Sbjct: 49 cgccggagaggagcaggaagaggagc 74
>gb|DR736707.1|DR736707 FGAS082077 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1048
Score = 44.1 bits (22), Expect = 0.051
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2516 cgcggttggcgacccagacgacggtc 2541
|||||||| |||||||||||||||||
Sbjct: 240 cgcggttgccgacccagacgacggtc 215
>emb|AX660687.1| Sequence 1044 from Patent WO03000906
Length = 706
Score = 44.1 bits (22), Expect = 0.051
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 649 tccattgcgtattcaggagacatgta 674
|||||||| |||||||||||||||||
Sbjct: 502 tccattgcatattcaggagacatgta 477
>emb|AX660698.1| Sequence 1055 from Patent WO03000906
Length = 548
Score = 44.1 bits (22), Expect = 0.051
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 645 gccttccattgcgtattcaggagacatgtagcca 678
||||||||||||||| || |||| ||||||||||
Sbjct: 293 gccttccattgcgtactcgggagccatgtagcca 260
>gb|BE400183.1|BE400183 AWB011.G11F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB011.G11, mRNA sequence
Length = 390
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 771 cgcgtccaggagaatgttgctggccttga 799
|||||||||||||| |||||| |||||||
Sbjct: 80 cgcgtccaggagaacgttgctcgccttga 52
>gb|CD866512.1|CD866512 AZO2.103K14F001107 AZO2 Triticum aestivum cDNA clone AZO2103K14,
mRNA sequence
Length = 704
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 771 cgcgtccaggagaatgttgctggccttga 799
|||||||||||||| |||||| |||||||
Sbjct: 116 cgcgtccaggagaacgttgctcgccttga 88
>gb|CD871658.1|CD871658 AZO2.118M05F010207 AZO2 Triticum aestivum cDNA clone AZO2118M05,
mRNA sequence
Length = 671
Score = 42.1 bits (21), Expect = 0.20
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 724 ccaaacatccttgccattccaaaatctgatatcttgggttt 764
||||| ||||| ||||| |||||||| | ||||||||||||
Sbjct: 519 ccaaagatcctcgccataccaaaatccgctatcttgggttt 479
>gb|CD873873.1|CD873873 AZO3.100O05F010924 AZO3 Triticum aestivum cDNA clone AZO3100O05,
mRNA sequence
Length = 599
Score = 42.1 bits (21), Expect = 0.20
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacg 806
|||||||| |||||||| || || || || | ||||||||| |||||||||||
Sbjct: 498 atcttggggttcatgtcggcatcaagaaggacgttgctggctttgagatcacg 446
>gb|CD875567.1|CD875567 AZO3.105N19F011002 AZO3 Triticum aestivum cDNA clone AZO3105N19,
mRNA sequence
Length = 669
Score = 42.1 bits (21), Expect = 0.20
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 754 atcttgggtttcatgtccgcgtccaggagaatgttgctggccttgagatcacg 806
|||||||| |||||||| || || || || | ||||||||| |||||||||||
Sbjct: 332 atcttggggttcatgtcggcatcaagaaggacgttgctggctttgagatcacg 280
>gb|CD917111.1|CD917111 G608.104A24F010904 G608 Triticum aestivum cDNA clone G608104A24,
mRNA sequence
Length = 688
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 771 cgcgtccaggagaatgttgctggccttga 799
|||||||||||||| |||||| |||||||
Sbjct: 396 cgcgtccaggagaacgttgctcgccttga 368
>gb|CK161382.1|CK161382 FGAS013950 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1135
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 771 cgcgtccaggagaatgttgctggccttga 799
|||||||||||||| |||||| |||||||
Sbjct: 752 cgcgtccaggagaacgttgctcgccttga 724
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 616,944
Number of Sequences: 636343
Number of extensions: 616944
Number of successful extensions: 172074
Number of sequences better than 0.5: 54
Number of HSP's better than 0.5 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 171943
Number of HSP's gapped (non-prelim): 120
length of query: 2766
length of database: 367,240,239
effective HSP length: 20
effective length of query: 2746
effective length of database: 354,513,379
effective search space: 973493738734
effective search space used: 973493738734
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)