BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750951.2.1
(1014 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE442549.1|BE442549 WHE1103_E09_J17ZS Wheat etiolated se... 293 1e-077
gb|BI751475.1|BI751475 Ta01_20d11_R Ta01_AAFC_ECORC_Fusariu... 258 7e-067
gb|BI751302.1|BI751302 Ta01_16f07_R Ta01_AAFC_ECORC_Fusariu... 242 4e-062
gb|BQ838299.1|BQ838299 WHE2908_G11_N22ZS Wheat aluminum-str... 192 3e-047
gb|CK207850.1|CK207850 FGAS019519 Triticum aestivum FGAS: L... 192 3e-047
gb|CK151519.1|CK151519 FGAS034088 Triticum aestivum FGAS: T... 188 5e-046
gb|BE403721.1|BE403721 WHE0435_H10_P19ZS Wheat etiolated se... 180 1e-043
gb|BJ270032.1|BJ270032 BJ270032 Y. Ogihara unpublished cDNA... 180 1e-043
gb|CA497098.1|CA497098 WHE3223_A11_B21ZT Wheat meiotic anth... 180 1e-043
gb|DR739724.1|DR739724 FGAS084941 Triticum aestivum FGAS: L... 163 3e-038
gb|BE517860.1|BE517860 WHE0803_A03_B05ZS Wheat vernalized c... 159 5e-037
gb|BG607282.1|BG607282 WHE2493_F04_L07ZS Triticum monococcu... 151 1e-034
gb|BQ901504.1|BQ901504 Ta02_16d03_R Ta02_AAFC_ECORC_Fusariu... 139 4e-031
gb|CD895052.1|CD895052 G118.127N13F010824 G118 Triticum aes... 139 4e-031
gb|CD896524.1|CD896524 G174.103C01F010822 G174 Triticum aes... 139 4e-031
gb|BH854375.1|BH854375 WG522-5 WG Triticum aestivum genomic... 137 2e-030
gb|DR733159.1|DR733159 FGAS078921 Triticum aestivum FGAS: L... 133 3e-029
gb|BQ802514.1|BQ802514 WHE2826_G09_M18ZS Triticum monococcu... 129 4e-028
gb|BQ901706.1|BQ901706 Ta02_15c07_R Ta02_AAFC_ECORC_Fusariu... 129 4e-028
gb|CA613804.1|CA613804 wr1.pk0145.b5 wr1 Triticum aestivum ... 121 1e-025
gb|CK201813.1|CK201813 FGAS010333 Triticum aestivum FGAS: L... 121 1e-025
dbj|AB094488.1| Triticum aestivum TaHd1-2 gene for Hd1-like... 121 1e-025
gb|BJ210112.1|BJ210112 BJ210112 Y. Ogihara unpublished cDNA... 117 2e-024
gb|CA635613.1|CA635613 wle1n.pk0102.g9 wle1n Triticum aesti... 117 2e-024
gb|CK199186.1|CK199186 FGAS007680 Triticum aestivum FGAS: L... 117 2e-024
gb|DR736805.1|DR736805 FGAS082175 Triticum aestivum FGAS: L... 117 2e-024
gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis,... 117 2e-024
dbj|AB094487.1| Triticum aestivum TaHd1-1 gene for Hd1-like... 113 2e-023
dbj|AB094489.1| Triticum aestivum TaHd1-3 gene for Hd1-like... 113 2e-023
dbj|AB094490.1| Triticum aestivum TaHd1-1 mRNA for Hd1-like... 113 2e-023
dbj|AB094491.1| Triticum aestivum TaHd1-3 mRNA for Hd1-like... 113 2e-023
gb|BF483002.1|BF483002 WHE2313_E11_I21ZS Wheat pre-anthesis... 105 6e-021
gb|AL829613.1|AL829613 AL829613 p:840 Triticum aestivum cDN... 98 1e-018
gb|CK209455.1|CK209455 FGAS021221 Triticum aestivum FGAS: L... 98 1e-018
gb|CK207361.1|CK207361 FGAS018982 Triticum aestivum FGAS: L... 94 2e-017
gb|BU100234.1|BU100234 WHE3316_G12_N24ZS Chinese Spring whe... 92 9e-017
gb|BE400791.1|BE400791 AWB007.C05F000328 ITEC AWB Wheat Mei... 90 4e-016
gb|CV782404.1|CV782404 FGAS076817 Triticum aestivum FGAS: L... 90 4e-016
gb|BE412197.1|BE412197 JJL003.G02R990515 ITEC JJL Wheat Lea... 80 3e-013
gb|CK161716.1|CK161716 FGAS014289 Triticum aestivum FGAS: L... 76 5e-012
gb|BF478520.1|BF478520 WHE2009_F08_K15ZS Chinese Spring whe... 68 1e-009
gb|BG909245.1|BG909245 TaLr1175D10R TaLr1 Triticum aestivum... 68 1e-009
gb|BQ243945.1|BQ243945 TaE15007A04F TaE15 Triticum aestivum... 68 1e-009
gb|CA626904.1|CA626904 wl1n.pk0145.a2 wl1n Triticum aestivu... 68 1e-009
gb|CD873600.1|CD873600 AZO3.100D24R011123 AZO3 Triticum aes... 68 1e-009
gb|CD873979.1|CD873979 AZO3.101B12R011123 AZO3 Triticum aes... 68 1e-009
gb|CD881977.1|CD881977 F1.104O15R010628 F1 Triticum aestivu... 68 1e-009
gb|CD886316.1|CD886316 G118.101P20F010601 G118 Triticum aes... 68 1e-009
gb|CK212500.1|CK212500 FGAS024374 Triticum aestivum FGAS: L... 68 1e-009
emb|AX658810.1| Sequence 83 from Patent WO03000904 68 1e-009
emb|AX660751.1| Sequence 1108 from Patent WO03000906 68 1e-009
gb|CD930609.1|CD930609 GR45.111N11R010612 GR45 Triticum aes... 66 5e-009
gb|BE429792.1|BE429792 TAS003.H01R990624 ITEC TAS Wheat cDN... 64 2e-008
gb|CA618526.1|CA618526 wl1n.pk0038.d4 wl1n Triticum aestivu... 64 2e-008
gb|CD884137.1|CD884137 F1.115K06F010507 F1 Triticum aestivu... 64 2e-008
gb|CD884138.1|CD884138 F1.115K06R010628 F1 Triticum aestivu... 64 2e-008
gb|BQ172190.1|BQ172190 WHE2009_F08_K15ZT Chinese Spring whe... 60 3e-007
gb|CD453414.1|CD453414 WHE1659-1662_E06_E06ZT CS wheat heat... 60 3e-007
gb|CA695335.1|CA695335 wlmk8.pk0009.f3 wlmk8 Triticum aesti... 52 8e-005
gb|AY485975.1| Triticum monococcum cultivar PI277133 ZCCT2 ... 44 0.019
gb|AY485976.1| Triticum monococcum cultivar PI272561 ZCCT2 ... 44 0.019
gb|AY485980.1| Triticum turgidum cultivar Langdon ZCCT2-Td ... 44 0.019
gb|AY485644.1| Triticum monococcum phosphatidylserine decar... 44 0.019
gb|BJ226741.1|BJ226741 BJ226741 Y. Ogihara unpublished cDNA... 40 0.29
gb|BJ231669.1|BJ231669 BJ231669 Y. Ogihara unpublished cDNA... 40 0.29
gb|BQ483279.1|BQ483279 WHE3506_F09_K18ZS Wheat unstressed r... 40 0.29
gb|BU099250.1|BU099250 WHE3305_C10_E19ZS Chinese Spring whe... 40 0.29
gb|CA729482.1|CA729482 wdi1c.pk007.n1 wdi1c Triticum aestiv... 40 0.29
>gb|BE442549.1|BE442549 WHE1103_E09_J17ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1103_E09_J17,
mRNA sequence
Length = 460
Score = 293 bits (148), Expect = 1e-077
Identities = 312/369 (84%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | ||||||| ||||||||||| |||||||| |||||||||
Sbjct: 449 cggtatcttgcaactgcataaccatgtgctaagagaaaattgtgagcaacgatgtaaggt 390
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| ||||| || |||||||| ||||||||| || ||||||| ||||||||||| ||||||
Sbjct: 389 tctgttgccgagttcccaccggcagcgcatttgctgcacctctgaggaggattcgaccct 330
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
||| || ||||| ||||| ||||||||||| || |||||| ||||||||||||||
Sbjct: 329 acgtcgtaaccaagaagcgcaactatccttggttcgttgaatgtaaaccagtgctttaca 270
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttc 710
|||||||| ||||||||||||| || ||||| ||||||| ||||| || || ||||
Sbjct: 269 cgatcgccaaaggtcttaaaacaaaaatcagcgtagtctgcaaacagtcccaccgtcttt 210
Query: 711 gcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaagg 770
|| ||||||| |||||||| |||||||||||||| ||||| ||||| |||||||||||
Sbjct: 209 gcatttaaccagcctccatacttcttctcaagcgccagagggagatcgtagtggtaaaga 150
Query: 771 ttgatgtaaggagtnatgccttgctgaagcagatagnntatcaaattattgtnatacgct 830
||||| |||||||| ||||||| |||||| || ||| ||||| |||||||| ||||||
Sbjct: 149 ttgatataaggagtaatgcctttctgaagaaggtagtttatcagattattgtaatacgcg 90
Query: 831 acaccttct 839
|| ||||||
Sbjct: 89 acgccttct 81
>gb|BI751475.1|BI751475 Ta01_20d11_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_20d11, mRNA
sequence
Length = 669
Score = 258 bits (130), Expect = 7e-067
Identities = 304/369 (82%)
Strand = Plus / Plus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | ||||||| ||||||||||| ||||||| ||||||||
Sbjct: 60 cggtatcttgcaactgcataaccatgtgctaagagaaaattgtgagcaaygatgtaaggk 119
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| ||||| || |||||||| ||||||||| || ||||||| ||||||||||| ||||||
Sbjct: 120 tctgttgccgagttcccaccggcagcgcatttgctgcacctctgaggaggattcgaccct 179
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
| | || ||||| ||||| ||||||||||| || |||||| ||||||||||||||
Sbjct: 180 acgccgtaaccaagaagcgcaactatccttggttcgttgaatgtaaaccagtgctttaca 239
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttc 710
|||||||| ||| ||||||||| || ||||| ||||||| ||||| || || ||||
Sbjct: 240 cgatcgccaaaggkcttaaaacaaaaatcagcgtagtctgcaaacagtcccaccgtcttt 299
Query: 711 gcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaagg 770
|| ||||||| |||||||| |||||||||||||| ||||| |||| |||||| ||||
Sbjct: 300 gcatttaaccagcctccatacttcttctcaagcgccagagggrgatcgtagtggkaaaga 359
Query: 771 ttgatgtaaggagtnatgccttgctgaagcagatagnntatcaaattattgtnatacgct 830
||||| ||||| || ||||||| |||||| || || ||||| |||||||| ||||||
Sbjct: 360 ttgatataaggrgtaatgcctttctgaagaaggkagtttatcagattattgtaatacgcg 419
Query: 831 acaccttct 839
|| ||||||
Sbjct: 420 acgccttct 428
>gb|BI751302.1|BI751302 Ta01_16f07_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_16f07, mRNA
sequence
Length = 655
Score = 242 bits (122), Expect = 4e-062
Identities = 302/369 (81%)
Strand = Plus / Plus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | ||||||| ||||| |||| | |||| | |||||||||
Sbjct: 60 cggtatcttgcaactgcataaccatgtgckcagagawaattgtkagcawcgatgtaaggt 119
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| ||||| || |||||||| ||||||||| || ||||||| ||||||||||| |||||
Sbjct: 120 tctgttgccgagttcccaccggcagcgcatttgctgcacctctgaggaggattcgacccc 179
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
||| || ||||| ||||| ||||||||||| || |||||| ||||||| ||||||
Sbjct: 180 acgtcgtaaccaagaagcgcaactatccttggttcgttgaatgtaaaccagttctttaca 239
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttc 710
|||||||| ||||||||||||| || ||||| ||||||| ||||| || || ||||
Sbjct: 240 cgatcgccaaaggtcttaaaacaaaaatcagcgtagtctgcaaacagtcccaccgtcttt 299
Query: 711 gcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaagg 770
|| ||||||| |||||||| |||||||||||||| | | | ||||| |||| ||||||
Sbjct: 300 gcatttaaccagcctccatacttcttctcaagcgccaravggagatcgtagtkgtaaaga 359
Query: 771 ttgatgtaaggagtnatgccttgctgaagcagatagnntatcaaattattgtnatacgct 830
||||| ||||||| ||||||| |||||| || ||| ||||| |||||||| ||||||
Sbjct: 360 ttgatakaaggagtaatgcctttctgaagaaggtagtttatcagattattgtaatacgcg 419
Query: 831 acaccttct 839
|| ||||||
Sbjct: 420 acgccttct 428
>gb|BQ838299.1|BQ838299 WHE2908_G11_N22ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2908_G11_N22, mRNA
sequence
Length = 726
Score = 192 bits (97), Expect = 3e-047
Identities = 222/266 (83%)
Strand = Plus / Minus
Query: 574 gaggaggatttgaccctgtgtcatagccaagtagcgctactatccttggctcattgaatn 633
|||||||||| |||||| ||| || ||||| ||||| ||||||||||| || ||||||
Sbjct: 726 gaggaggattcgaccctacgtcgtaaccaagaagcgcaactatccttggttcgttgaatg 667
Query: 634 nnaaccagtgctttacgcgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaa 693
|||||||||||||| |||||||| ||||||||||||| || ||||| ||||||| ||
Sbjct: 666 taaaccagtgctttacacgatcgccaaaggtcttaaaacaaaaatcagcgtagtctgcaa 607
Query: 694 acaagtccgccatcttcgcgcttaaccaccctccatatttcttctcaagcgcaagaggaa 753
||| || || |||| || ||||||| |||||||| |||||||||||||| ||||| |
Sbjct: 606 acagtcccaccgtctttgcatttaaccagcctccatacttcttctcaagcgccagaggga 547
Query: 754 gatcatagtggtaaaggttgatgtaaggagtnatgccttgctgaagcagatagnntatca 813
|||| ||||||||||| ||||| |||||||| ||||||| |||||| || ||| |||||
Sbjct: 546 gatcgtagtggtaaagattgatataaggagtaatgcctttctgaagaaggtagtttatca 487
Query: 814 aattattgtnatacgctacaccttct 839
|||||||| |||||| || ||||||
Sbjct: 486 gattattgtaatacgcgacgccttct 461
>gb|CK207850.1|CK207850 FGAS019519 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1095
Score = 192 bits (97), Expect = 3e-047
Identities = 193/226 (85%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | ||||||| ||||||||||| |||||||| |||||||||
Sbjct: 271 cggtatcttgcaactgcataaccatgtgctaagagaaaattgtgagcaacgatgtaaggt 212
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| ||||| || |||||||| ||||||||| || ||||||| ||||||||||| ||||||
Sbjct: 211 tctgttgccgagttcccaccggcagcgcatttgctgcacctctgaggaggattcgaccct 152
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
||| || ||||| ||||| ||||||||||| || |||||| ||||||||||||||
Sbjct: 151 acgtcgtaaccaagaagcgcaactatccttggttcgttgaatgtaaaccagtgctttaca 92
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaaca 696
|||||||| ||||||||||||| || ||||| |||| || |||||
Sbjct: 91 cgatcgccaaaggtcttaaaacaaaaatcagcgtagtgtgcaaaca 46
>gb|CK151519.1|CK151519 FGAS034088 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 885
Score = 188 bits (95), Expect = 5e-046
Identities = 233/280 (83%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | ||||||| ||||||||||| |||||||| ||||||||
Sbjct: 423 cggtatcttgcaactgcataaccatgtgctaagagaaaattgtgagcaacgatgtaaggc 364
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| || ||||| ||||||||| || ||||||| ||||||||||| ||||||
Sbjct: 363 tctgttgctgagttgccaccggcagcgcatttgctgcacctctgaggaggattcgaccct 304
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| || || || ||||| || |||||||| || |||||| ||||||||||||||
Sbjct: 303 acatcgtaacccagaagcgcaacaatccttggttcgttgaatgtaaaccagtgctttaca 244
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttc 710
||||||||| ||||||||||||| |||||||| ||||||| ||| | || | ||||
Sbjct: 243 cgatcgccgaaggtcttaaaacaaaagtcagcgtagtctgcaaatagtcccactgtctta 184
Query: 711 gcgcttaaccaccctccatatttcttctcaagcgcaagag 750
|| ||||||| |||||||| ||||||||||| |||||||
Sbjct: 183 gcatttaaccagcctccatacttcttctcaagtgcaagag 144
>gb|BE403721.1|BE403721 WHE0435_H10_P19ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0435_H10_P19, mRNA
sequence
Length = 540
Score = 180 bits (91), Expect = 1e-043
Identities = 201/240 (83%)
Strand = Plus / Minus
Query: 600 ccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacgcgatcgccg 659
||||| ||||| ||||||||||| || |||||| ||||||||||| || ||||||||
Sbjct: 514 ccaagaagcgcaactatccttggttcgttgaatgtaaaccagtgcttaacacgatcgcca 455
Query: 660 taggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttcgcgcttaac 719
||||||||||||| |||||||||||||||| ||| | || || |||| || |||||
Sbjct: 454 aaggtcttaaaacaaaagtcagcatagtctgcaaatagtcccaccgtctttgcatttaac 395
Query: 720 caccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaaggttgatgtaa 779
|| |||||||| |||||||| || |||||||| ||||||||||||||||| ||||| |||
Sbjct: 394 cagcctccatacttcttctcgagtgcaagagggagatcatagtggtaaagattgatataa 335
Query: 780 ggagtnatgccttgctgaagcagatagnntatcaaattattgtnatacgctacaccttct 839
||||| ||||||| |||||| || ||| ||||| |||||||| |||||| || ||||||
Sbjct: 334 ggagtaatgcctttctgaagaaggtagtttatcagattattgtaatacgcgacgccttct 275
>gb|BJ270032.1|BJ270032 BJ270032 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh5m05 5', mRNA sequence
Length = 573
Score = 180 bits (91), Expect = 1e-043
Identities = 181/212 (85%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | ||||||| ||||||||||| |||||||| ||||||||
Sbjct: 217 cggtatcttgcaactgcataaccatgtgctaagagaaaattgtgagcaacgatgtaaggc 158
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| || ||||| ||||||||| || ||||||| ||||||||||| ||||||
Sbjct: 157 tctgttgctgagttgccaccggcagcgcatttgctgcacctctgaggaggattcgaccct 98
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| || ||||| ||||| || |||||||| || |||||| ||||||||||||||
Sbjct: 97 acatcgtaaccaagaagcgcaacaatccttggttcgttgaatgtaaaccagtgctttaca 38
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagc 682
||||||||| ||||||||||||| ||||||||
Sbjct: 37 cgatcgccgaaggtcttaaaacaaaagtcagc 6
>gb|CA497098.1|CA497098 WHE3223_A11_B21ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3223_A11_B21, mRNA sequence
Length = 276
Score = 180 bits (91), Expect = 1e-043
Identities = 187/220 (85%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | |||||| ||||||||||| |||||||| ||||||||
Sbjct: 265 cggtatcttgcaactgcataaccatgtgttaagagaaaattgtgagcaacgatgtaaggc 206
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| || ||||| ||||||||| || ||||||| ||||||||||| ||||||
Sbjct: 205 tctgttgctgagttgccaccggcagcgcatttgctgcacctctgaggaggattcgaccct 146
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| || ||||| ||||| || |||||||| || |||||| ||||||||||||||
Sbjct: 145 acatcgtaaccaagaagcgcaacaatccttggttcgttgaatgtaaaccagtgctttaca 86
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctg 690
||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 85 cgatcgccgaaggtcttaaaacaaaagtcagcgtagtctg 46
>gb|DR739724.1|DR739724 FGAS084941 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1072
Score = 163 bits (82), Expect = 3e-038
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | |||| || ||||||||||| |||||||| |||||||||
Sbjct: 231 cggtatcttgcaactgcataaccatgagctaagagaaaattgtgagcaacgatgtaaggt 172
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| || ||||| ||||||||| || |||| || ||||||||||| ||||||
Sbjct: 171 tctgttgctgagttgccaccggcagcgcatttgctgcatctctgaggaggattcgaccct 112
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| || ||||| ||||| ||||||||||| || |||||| ||||||||||||||
Sbjct: 111 acatcgtaaccaagaagcgcaactatccttggttcgttgaatgtaaaccagtgctttaca 52
Query: 651 cgatcgccgtaggtcttaaaaca 673
|||||||| |||||||||||||
Sbjct: 51 cgatcgccaaaggtcttaaaaca 29
>gb|BE517860.1|BE517860 WHE0803_A03_B05ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0803_A03_B05, mRNA sequence
Length = 504
Score = 159 bits (80), Expect = 5e-037
Identities = 170/201 (84%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | |||| || ||||||||||| |||||||| |||||||||
Sbjct: 201 cggtatcttgcaactgcataaccatgagctaagagaaaattgtgagcaacgatgtaaggt 142
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| || ||||| ||||||||| || |||| || ||||||||||| ||||||
Sbjct: 141 tctgttgctgagttgccaccggcagcgcatttgctgcatctctgaggaggattcgaccct 82
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| || ||||| ||||| ||||||||||| || |||||| ||||||||||||||
Sbjct: 81 acatcgtaaccaagaagcgcaactatccttggttcgttgaatgtaaaccagtgctttaca 22
Query: 651 cgatcgccgtaggtcttaaaa 671
|||||||| |||||||||||
Sbjct: 21 cgatcgccaaaggtcttaaaa 1
>gb|BG607282.1|BG607282 WHE2493_F04_L07ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2493_F04_L07,
mRNA sequence
Length = 608
Score = 151 bits (76), Expect = 1e-034
Identities = 294/369 (79%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||| |||||||| |||||||| | ||||||| |||||| |||| |||||||
Sbjct: 597 cggtatctcgcaactgcggtagcatgagataagagaatgttatgaacaacagtgtaaggc 538
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| |||||||| ||||||||| |||||||||| | ||| ||||| | ||
Sbjct: 537 tctgttgctgagttcccaccggcagcgcatttggtgcacctgttagggggattcgttcca 478
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| ||| |||||||| || ||||||||||||||||||||| ||||||| ||| |
Sbjct: 477 gtatcaaagccaagtgctgccactatccttggctcattgaatgtgaaccagttcttaatt 418
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttc 710
||||| || || ||||| ||||| || ||||||||||| | ||| | || ||| |||||
Sbjct: 417 cgatcaccataagtcttgaaacaaaattcagcatagtccgcaaatatgttcgcgatcttt 358
Query: 711 gcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaagg 770
| |||||| | || |||| ||||||| |||||||||||| | ||||||||||| |||
Sbjct: 357 gggcttaagaagccatcatacttcttctgaagcgcaagagggatatcatagtggttgagg 298
Query: 771 ttgatgtaaggagtnatgccttgctgaagcagatagnntatcaaattattgtnatacgct 830
|||| |||||||| | ||||||| ||| | ||| ||||| ||| |||| ||||| |
Sbjct: 297 ttgacataaggagtgagtccttgcttaaggacgtagtctatcagattgttgtaatacgtt 238
Query: 831 acaccttct 839
|||||||||
Sbjct: 237 acaccttct 229
>gb|BQ901504.1|BQ901504 Ta02_16d03_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_16d03, mRNA
sequence
Length = 478
Score = 139 bits (70), Expect = 4e-031
Identities = 235/291 (80%)
Strand = Plus / Plus
Query: 475 atcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggttcgg 534
|||| ||||||||||||||||| | |||||||| |||||| |||| ||||||| || |
Sbjct: 1 atctcgcaactgcagtagcatgagacaagagaatgttatgaacaacagtgtaaggctctg 60
Query: 535 ttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccctgtgt 594
|||| || |||||||| ||||||||| |||||||||| | ||| ||||| | || || |
Sbjct: 61 ttgcggagttcccaccggcagcgcatttggtgcacctgttagggggattcgttccagtat 120
Query: 595 catagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacgcgat 654
|| |||||||| |||||||||||||||||||||||| ||||||| ||| | ||||
Sbjct: 121 caaagccaagtgctgctactatccttggctcattgaatgtgaaccagttcttaattcgat 180
Query: 655 cgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttcgcgc 714
| || || ||||| ||||| || ||||||||||| | ||| | || ||| ||||| | ||
Sbjct: 181 caccataagtcttgaaacaaaattcagcatagtccgcaaatatgttcgcgatctttgggc 240
Query: 715 ttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggt 765
|||| | || |||| ||||||| |||||||||||| | |||||||||||
Sbjct: 241 ttaagaagccatcatacttcttctgaagcgcaagagggatatcatagtggt 291
>gb|CD895052.1|CD895052 G118.127N13F010824 G118 Triticum aestivum cDNA clone G118127N13,
mRNA sequence
Length = 703
Score = 139 bits (70), Expect = 4e-031
Identities = 235/291 (80%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||| ||||||||||||||||| | |||||||| |||||| |||| |||||||
Sbjct: 371 cggtatctcgcaactgcagtagcatgagacaagagaatgttatgaacaacagtgtaaggc 312
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| ||||| || |||||||| ||||||||| |||||||||| | ||| ||||| | ||
Sbjct: 311 tctgttgcggagttcccaccggcagcgcatttggtgcacctgttagggggattcgttcca 252
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| ||| |||||||| |||||||||||||||||||||||| ||||||| ||| |
Sbjct: 251 gtatcaaagccaagtgctgctactatccttggctcattgaatgtgaaccagttcttaatt 192
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttc 710
||||| || || ||||| ||||| || ||||||||||| | ||| | || ||| |||||
Sbjct: 191 cgatcaccataagtcttgaaacaaaattcagcatagtccgcaaatatgttcgcgatcttt 132
Query: 711 gcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatag 761
| |||||| | || |||| ||||||| |||||||||||| | |||||||
Sbjct: 131 gggcttaagaagccatcatacttcttctgaagcgcaagagggatatcatag 81
>gb|CD896524.1|CD896524 G174.103C01F010822 G174 Triticum aestivum cDNA clone G174103C01,
mRNA sequence
Length = 649
Score = 139 bits (70), Expect = 4e-031
Identities = 151/179 (84%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | |||| || ||||||||||| |||||||| |||||||||
Sbjct: 190 cggtatcttgcaactgcataaccatgagctaagagaaaattgtgagcaacgatgtaaggt 131
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| || ||||| ||||||||| || |||| || ||||||||||| ||||||
Sbjct: 130 tctgttgctgagttgccaccggcagcgcatttgctgcatctctgaggaggattcgaccct 71
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttac 649
|| || ||||| ||||| ||||||||||| || |||||| ||||||||||||||
Sbjct: 70 acatcgtaaccaagaagcgcaactatccttggttcgttgaatgtaaaccagtgctttac 12
>gb|BH854375.1|BH854375 WG522-5 WG Triticum aestivum genomic clone WG522 5', DNA sequence
Length = 279
Score = 137 bits (69), Expect = 2e-030
Identities = 124/141 (87%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 259 ctccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtt 318
||||| ||| || ||||||||||| || ||||||| |||||||||||||||||| |||||
Sbjct: 175 ctccaaggagagagaggccagggtcctcaggtacaaggagaagaagaagagcagaaagtt 116
Query: 319 tgagaagaccatacggtatgcaacgaggaagacgtacgcagaagcacggccgaggatcaa 378
||||||||||| ||| |||||||| |||||| |||| || ||||||||||| ||||||||
Sbjct: 115 tgagaagaccacacgttatgcaacaaggaaggcgtatgccgaagcacggccaaggatcaa 56
Query: 379 gggacgcttcgcgaaaagatc 399
||| | |||||| ||||||||
Sbjct: 55 ggggc-cttcgccaaaagatc 36
>gb|DR733159.1|DR733159 FGAS078921 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 629
Score = 133 bits (67), Expect = 3e-029
Identities = 233/284 (82%), Gaps = 4/284 (1%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagc-atgtgccaagagaaaattatgagcaactatgtaagg 529
|||||||||||||||||| |||| ||| || ||||||||||| |||||| | ||||||||
Sbjct: 397 cggtatcttgcaactgca-tagccatgagctaagagaaaattgtgagcatcgatgtaagg 339
Query: 530 ttcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccc 589
||| |||||||| || ||||| ||||||||| || |||| || |||||||||| |||||
Sbjct: 338 ttctgttgctgagttaccaccggcagcgcatttgctgcatctcagaggaggattcgaccc 279
Query: 590 tgtgtc-atagccaagtagcgctactatcct-tggctcattgaatnnnaaccagtgcttt 647
| || |||||||| ||||| | |||||| ||| | | |||| ||||||||||||
Sbjct: 278 tacatcggtagccaagaagcgcaattatcctctggttagtggaatgtaaaccagtgcttt 219
Query: 648 acgcgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatc 707
|| |||||||| ||||||||||||| |||||||||||||||| ||| | || || ||
Sbjct: 218 acacgatcgccaaaggtcttaaaacaaaagtcagcatagtctgcaaatagtcccaccgtc 159
Query: 708 ttcgcgcttaaccaccctccatatttcttctcaagcgcaagagg 751
|| || ||||||| |||||||| |||||||| || ||||||||
Sbjct: 158 tttgcatttaaccagcctccatacttcttctcgagtgcaagagg 115
>gb|BQ802514.1|BQ802514 WHE2826_G09_M18ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2826_G09_M18, mRNA
sequence
Length = 785
Score = 129 bits (65), Expect = 4e-028
Identities = 251/314 (79%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||| |||||||| |||||||| | ||||||| |||||| |||| |||||||
Sbjct: 350 cggtatctcgcaactgcggtagcatgagataagagaatgttatgaacaacagtgtaaggc 291
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| |||||||| ||||||||| |||||||||| | ||| ||||| | ||
Sbjct: 290 tctgttgctgagttcccaccggcagcgcatttggtgcacctgttagggggattcgttcca 231
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| ||| |||||||| || ||||||||||||||||||||| ||||||| ||| |
Sbjct: 230 gtatcaaagccaagtgctgccactatccttggctcattgaatgtgaaccagttcttaatt 171
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttc 710
||||| || || ||||| ||||| || ||||||||||| | ||| | || ||| |||||
Sbjct: 170 cgatcaccataagtcttgaaacaaaattcagcatagtccgcaaatatgttcgcgatcttt 111
Query: 711 gcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaagg 770
| |||||| | || |||| ||||||| ||| |||||||| | ||||||||||| |||
Sbjct: 110 gggcttaagaagccatcatacttcttctgaagtgcaagagggatatcatagtggttgagg 51
Query: 771 ttgatgtaaggagt 784
|||| ||||||||
Sbjct: 50 ttgacataaggagt 37
>gb|BQ901706.1|BQ901706 Ta02_15c07_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_15c07, mRNA
sequence
Length = 490
Score = 129 bits (65), Expect = 4e-028
Identities = 238/296 (80%), Gaps = 1/296 (0%)
Strand = Plus / Plus
Query: 471 cggtatcttgcaactgcagtagcatgtgc-caagagaaaattatgagcaactatgtaagg 529
|||||||| ||||||||||||||||| | |||||||| |||||| |||| |||||||
Sbjct: 9 cggtatctcgcaactgcagtagcatgagagcaagagaatgttatgaacaacagtgtaagg 68
Query: 530 ttcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccc 589
|| ||||| || |||||||| ||||||||| |||||||||| | ||| ||||| | ||
Sbjct: 69 ctctgttgcggagttcccaccggcagcgcatttggtgcacctgttagggggattcgttcc 128
Query: 590 tgtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttac 649
|| ||| |||||||| |||||||||||||||||||||||| ||||||| ||| |
Sbjct: 129 agtatcaaagccaagtgctgctactatccttggctcattgaatgtgaaccagttcttaat 188
Query: 650 gcgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatctt 709
||||| || || || || ||||| || ||||||||||| | ||| | || ||| |||||
Sbjct: 189 tcgatcaccataagtmttgaaacaaaattcagcatagtccgcaaatatgttcgcaatctt 248
Query: 710 cgcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggt 765
| |||||| | || |||| ||||||| |||||||||||| | |||||||||||
Sbjct: 249 tgggcttaaraagccatcatacttcttctgaagcgcaagagggatatcatagtggt 304
>gb|CA613804.1|CA613804 wr1.pk0145.b5 wr1 Triticum aestivum cDNA clone wr1.pk0145.b5 5'
end, mRNA sequence
Length = 297
Score = 121 bits (61), Expect = 1e-025
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 715 ttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaaggttga 774
||||||| |||||||| |||||||||||||| ||||| ||||| ||||||||||| ||||
Sbjct: 272 ttaaccagcctccatacttcttctcaagcgccagagggagatcgtagtggtaaagattga 213
Query: 775 tgtaaggagtnatgccttgctgaagcagatagnntatcaaattattgtnatacgctacac 834
| |||||||| ||||||| |||||| || ||| ||||| |||||||| |||||| || |
Sbjct: 212 tataaggagtaatgcctttctgaagaaggtagtttatcagattattgtaatacgcgacgc 153
Query: 835 cttct 839
|||||
Sbjct: 152 cttct 148
>gb|CK201813.1|CK201813 FGAS010333 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 839
Score = 121 bits (61), Expect = 1e-025
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 715 ttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaaggttga 774
||||||| |||||||| |||||||||||||| ||||| ||||| ||||||||||| ||||
Sbjct: 620 ttaaccagcctccatacttcttctcaagcgccagagggagatcgtagtggtaaagattga 561
Query: 775 tgtaaggagtnatgccttgctgaagcagatagnntatcaaattattgtnatacgctacac 834
| |||||||| ||||||| |||||| || ||| ||||| |||||||| |||||| || |
Sbjct: 560 tataaggagtaatgcctttctgaagaaggtagtttatcagattattgtaatacgcgacgc 501
Query: 835 cttct 839
|||||
Sbjct: 500 cttct 496
Score = 101 bits (51), Expect = 9e-020
Identities = 119/143 (83%)
Strand = Plus / Minus
Query: 527 aggttcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttga 586
|||||| ||||| || |||||||| ||||||||| || ||||||| ||||||||||| ||
Sbjct: 811 aggttctgttgccgagttcccaccggcagcgcatttgctgcacctctgaggaggattcga 752
Query: 587 ccctgtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctt 646
|| | ||| || ||||| ||||| |||||||| || || |||||| |||||||||||
Sbjct: 751 ccntacgtcgtaaccaagaagcgcaactatcctgggttcgttgaatgtaaaccagtgctt 692
Query: 647 tacgcgatcgccgtaggtcttaa 669
||| |||||||| |||||||||
Sbjct: 691 tacacgatcgccaaaggtcttaa 669
>dbj|AB094488.1| Triticum aestivum TaHd1-2 gene for Hd1-like protein, complete cds
Length = 2018
Score = 121 bits (61), Expect = 1e-025
Identities = 121/141 (85%)
Strand = Plus / Plus
Query: 259 ctccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtt 318
|||||||||||| ||||||||||| || ||||||| |||||||||| ||| ||||||||
Sbjct: 1711 ctccatggacagagaggccagggtcctcaggtacaaggagaagaagcagacgaggaagtt 1770
Query: 319 tgagaagaccatacggtatgcaacgaggaagacgtacgcagaagcacggccgaggatcaa 378
| |||| |||||| |||||||||| ||||| | || ||||||||||| ||| |||||||
Sbjct: 1771 tcagaaaaccataaggtatgcaacaaggaaagcatatgcagaagcacgaccgcggatcaa 1830
Query: 379 gggacgcttcgcgaaaagatc 399
||| || ||||| ||||||||
Sbjct: 1831 gggtcgattcgctaaaagatc 1851
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 125 tcaatggaggtgggtatagtaccagacaaca 155
||||||||||||||||||||||| |||||||
Sbjct: 1589 tcaatggaggtgggtatagtaccggacaaca 1619
>gb|BJ210112.1|BJ210112 BJ210112 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh9e23 5', mRNA sequence
Length = 565
Score = 117 bits (59), Expect = 2e-024
Identities = 242/304 (79%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||| |||||||| |||||||| | |||||||| |||||| |||| |||||||
Sbjct: 457 cggtatctcgcaactgcggtagcatgagacaagagaatgttatgaacaacagtgtaaggc 398
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| |||||||| ||||||||| |||||||||| | ||| || || | ||
Sbjct: 397 tctgttgctgagttcccaccggcagcgcatttggtgcacctgttaggggggttcgttcca 338
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| ||| |||| ||| ||||| |||||||||||||||||| ||||||| ||| |
Sbjct: 337 gtatcaaagcccagtgctgctacaatccttggctcattgaatgtgaaccagttcttaatt 278
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttc 710
||||| || || ||||| ||||| || ||||||||||| | ||| | | ||| |||||
Sbjct: 277 cgatcaccataagtcttgaaacaaaattcagcatagtccgcaaatatggtcgcgatcttt 218
Query: 711 gcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaagg 770
| |||||| | || |||| ||||||| |||||||||||| | ||||||||||| |||
Sbjct: 217 gggcttaagaagccatcatacttcttctgaagcgcaagagggatatcatagtggttgagg 158
Query: 771 ttga 774
||||
Sbjct: 157 ttga 154
>gb|CA635613.1|CA635613 wle1n.pk0102.g9 wle1n Triticum aestivum cDNA clone wle1n.pk0102.g9
5' end, mRNA sequence
Length = 595
Score = 117 bits (59), Expect = 2e-024
Identities = 104/119 (87%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | ||||||| ||||||||||| |||||||| ||||||||
Sbjct: 119 cggtatcttgcaactgcataaccatgtgctaagagaaaattgtgagcaacgatgtaaggc 60
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccc 589
|| |||||||| || ||||| ||||||||| || ||||||| ||||||||||| |||||
Sbjct: 59 tctgttgctgagttgccaccggcagcgcatttgctgcacctctgaggaggattcgaccc 1
>gb|CK199186.1|CK199186 FGAS007680 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 117 bits (59), Expect = 2e-024
Identities = 242/304 (79%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||| |||||||| |||||||| | |||||||| |||||| |||| |||||||
Sbjct: 513 cggtatctcgcaactgcggtagcatgagacaagagaatgttatgaacaacagtgtaaggc 454
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| |||||||| ||||||||| |||||||||| | ||| || || | ||
Sbjct: 453 tctgttgctgagttcccaccggcagcgcatttggtgcacctgttaggggggttcgttcca 394
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| ||| |||| ||| ||||| |||||||||||||||||| ||||||| ||| |
Sbjct: 393 gtatcaaagcccagtgctgctacaatccttggctcattgaatgtgaaccagttcttaatt 334
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttc 710
||||| || || ||||| ||||| || ||||||||||| | ||| | | ||| |||||
Sbjct: 333 cgatcaccataagtcttgaaacaaaattcagcatagtccgcaaatatggtcgcgatcttt 274
Query: 711 gcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaagg 770
| |||||| | || |||| ||||||| |||||||||||| | ||||||||||| |||
Sbjct: 273 gggcttaagaagccatcatacttcttctgaagcgcaagagggatatcatagtggttgagg 214
Query: 771 ttga 774
||||
Sbjct: 213 ttga 210
>gb|DR736805.1|DR736805 FGAS082175 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1054
Score = 117 bits (59), Expect = 2e-024
Identities = 242/304 (79%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||| |||||||| |||||||| | |||||||| |||||| |||| |||||||
Sbjct: 847 cggtatctcgcaactgcggtagcatgagacaagagaatgttatgaacaacagtgtaaggc 788
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| |||||||| ||||||||| |||||||||| | ||| || || | ||
Sbjct: 787 tctgttgctgagttcccaccggcagcgcatttggtgcacctgttaggggggttcgttcca 728
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| ||| |||| ||| ||||| |||||||||||||||||| ||||||| ||| |
Sbjct: 727 gtatcaaagcccagtgctgctacaatccttggctcattgaatgtgaaccagttcttaatt 668
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttc 710
||||| || || ||||| ||||| || ||||||||||| | ||| | | ||| |||||
Sbjct: 667 cgatcaccataagtcttgaaacaaaattcagcatagtccgcaaatatggtcgcgatcttt 608
Query: 711 gcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaagg 770
| |||||| | || |||| ||||||| |||||||||||| | ||||||||||| |||
Sbjct: 607 gggcttaagaagccatcatacttcttctgaagcgcaagagggatatcatagtggttgagg 548
Query: 771 ttga 774
||||
Sbjct: 547 ttga 544
>gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis, full insert mRNA
sequence
Length = 1023
Score = 117 bits (59), Expect = 2e-024
Identities = 104/119 (87%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||||||||||||| | ||||||| ||||||||||| |||||||| ||||||||
Sbjct: 126 cggtatcttgcaactgcataaccatgtgctaagagaaaattgtgagcaacgatgtaaggc 67
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccc 589
|| |||||||| || ||||| ||||||||| || ||||||| ||||||||||| |||||
Sbjct: 66 tctgttgctgagttgccaccggcagcgcatttgctgcacctctgaggaggattcgaccc 8
>dbj|AB094487.1| Triticum aestivum TaHd1-1 gene for Hd1-like protein, complete cds
Length = 2215
Score = 113 bits (57), Expect = 2e-023
Identities = 120/141 (85%)
Strand = Plus / Plus
Query: 259 ctccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtt 318
|||||||||||| ||||||||||| || ||||||| |||||||||| ||| ||||||||
Sbjct: 1907 ctccatggacagagaggccagggtcctcaggtacaaggagaagaagcagacaaggaagtt 1966
Query: 319 tgagaagaccatacggtatgcaacgaggaagacgtacgcagaagcacggccgaggatcaa 378
| |||| |||||| |||||||||| ||||| | || ||||||||||| || |||||||
Sbjct: 1967 tcagaaaaccataaggtatgcaacaaggaaagcttatgcagaagcacgaccacggatcaa 2026
Query: 379 gggacgcttcgcgaaaagatc 399
||| || ||||| ||||||||
Sbjct: 2027 gggtcgattcgctaaaagatc 2047
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 125 tcaatggaggtgggtatagtaccagacaaca 155
|||||||||||||||||| ||||||||||||
Sbjct: 1785 tcaatggaggtgggtataataccagacaaca 1815
>dbj|AB094489.1| Triticum aestivum TaHd1-3 gene for Hd1-like protein, complete cds
Length = 2078
Score = 113 bits (57), Expect = 2e-023
Identities = 120/141 (85%)
Strand = Plus / Plus
Query: 259 ctccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtt 318
|||||||||||| ||||||||||| || ||||||| |||||||||| ||| ||||||||
Sbjct: 1770 ctccatggacagagaggccagggtcctcaggtacaaggagaagaagcagacgaggaagtt 1829
Query: 319 tgagaagaccatacggtatgcaacgaggaagacgtacgcagaagcacggccgaggatcaa 378
| |||| |||||| |||||||||| ||||| | || ||||||||||| || |||||||
Sbjct: 1830 tcagaaaaccataaggtatgcaacaaggaaagcatatgcagaagcacgaccacggatcaa 1889
Query: 379 gggacgcttcgcgaaaagatc 399
||| || ||||| ||||||||
Sbjct: 1890 gggtcgattcgctaaaagatc 1910
Score = 52.0 bits (26), Expect = 8e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 125 tcaatggaggtgggtatagtaccagacaac 154
||||||||||||||||||||||| ||||||
Sbjct: 1648 tcaatggaggtgggtatagtaccggacaac 1677
>dbj|AB094490.1| Triticum aestivum TaHd1-1 mRNA for Hd1-like protein, complete cds
Length = 1310
Score = 113 bits (57), Expect = 2e-023
Identities = 120/141 (85%)
Strand = Plus / Plus
Query: 259 ctccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtt 318
|||||||||||| ||||||||||| || ||||||| |||||||||| ||| ||||||||
Sbjct: 1046 ctccatggacagagaggccagggtcctcaggtacaaggagaagaagcagacaaggaagtt 1105
Query: 319 tgagaagaccatacggtatgcaacgaggaagacgtacgcagaagcacggccgaggatcaa 378
| |||| |||||| |||||||||| ||||| | || ||||||||||| || |||||||
Sbjct: 1106 tcagaaaaccataaggtatgcaacaaggaaagcttatgcagaagcacgaccacggatcaa 1165
Query: 379 gggacgcttcgcgaaaagatc 399
||| || ||||| ||||||||
Sbjct: 1166 gggtcgattcgctaaaagatc 1186
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 125 tcaatggaggtgggtatagtaccagacaaca 155
|||||||||||||||||| ||||||||||||
Sbjct: 924 tcaatggaggtgggtataataccagacaaca 954
>dbj|AB094491.1| Triticum aestivum TaHd1-3 mRNA for Hd1-like protein, complete cds
Length = 1313
Score = 113 bits (57), Expect = 2e-023
Identities = 120/141 (85%)
Strand = Plus / Plus
Query: 259 ctccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtt 318
|||||||||||| ||||||||||| || ||||||| |||||||||| ||| ||||||||
Sbjct: 1046 ctccatggacagagaggccagggtcctcaggtacaaggagaagaagcagacgaggaagtt 1105
Query: 319 tgagaagaccatacggtatgcaacgaggaagacgtacgcagaagcacggccgaggatcaa 378
| |||| |||||| |||||||||| ||||| | || ||||||||||| || |||||||
Sbjct: 1106 tcagaaaaccataaggtatgcaacaaggaaagcatatgcagaagcacgaccacggatcaa 1165
Query: 379 gggacgcttcgcgaaaagatc 399
||| || ||||| ||||||||
Sbjct: 1166 gggtcgattcgctaaaagatc 1186
Score = 52.0 bits (26), Expect = 8e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 125 tcaatggaggtgggtatagtaccagacaac 154
||||||||||||||||||||||| ||||||
Sbjct: 924 tcaatggaggtgggtatagtaccggacaac 953
>gb|BF483002.1|BF483002 WHE2313_E11_I21ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2313_E11_I21, mRNA sequence
Length = 421
Score = 105 bits (53), Expect = 6e-021
Identities = 176/218 (80%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||| |||||||| |||||||| | |||||||| |||||| |||| |||||||
Sbjct: 233 cggtatctcgcaactgcggtagcatgagacaagagaatgttatgaacaacagtgtaaggc 174
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| |||||||| |||||||| ||||||||| |||||||||| | ||| || || | ||
Sbjct: 173 tctgttgctgagttcccaccggcagcgcatttggtgcacctgttaggggggttcgttcca 114
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacg 650
|| ||| |||| ||| ||||| |||||||||||||||||| ||||||| ||| |
Sbjct: 113 gtatcaaagcccagtgctgctacaatccttggctcattgaatgtgaaccagttcttaatt 54
Query: 651 cgatcgccgtaggtcttaaaacagaagtcagcatagtc 688
||||| || || ||||| ||||| || |||||||||||
Sbjct: 53 cgatcaccataagtcttgaaacaaaattcagcatagtc 16
>gb|AL829613.1|AL829613 AL829613 p:840 Triticum aestivum cDNA clone F10_p840_plate_3, mRNA
sequence
Length = 486
Score = 97.6 bits (49), Expect = 1e-018
Identities = 104/121 (85%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgcc-aagagaaaattatgagcaactatgtaagg 529
|||||||||||||||||| | |||| || ||||||||||| |||||||| ||||||||
Sbjct: 123 cggtatcttgcaactgcataaccatgggcttaagagaaaattgtgagcaacgatgtaagg 64
Query: 530 ttcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccc 589
|| |||||||| || ||||| ||||||||| || ||||||| ||||||||||| |||||
Sbjct: 63 ctctgttgctgagttgccaccggcagcgcatttgctgcacctctgaggaggattcgaccc 4
Query: 590 t 590
|
Sbjct: 3 t 3
>gb|CK209455.1|CK209455 FGAS021221 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1126
Score = 97.6 bits (49), Expect = 1e-018
Identities = 242/305 (79%), Gaps = 2/305 (0%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaacta-tgtaagg 529
|||||||| ||| |||| |||||||| | |||||||| |||||| |||| | |||||||
Sbjct: 818 cggtatctcgcanctgcggtagcatgagacaagagaatgttatga-caaccagtgtaagg 760
Query: 530 ttcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccc 589
|| |||||||| |||||||| ||||||||| |||||||||| | ||| || || | ||
Sbjct: 759 ctctgttgctgagttcccaccggcagcgcatttggtgcacctgttaggggggttcgttcc 700
Query: 590 tgtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttac 649
|| ||| |||| ||| ||||| |||||||||||||||||| ||||||| ||| |
Sbjct: 699 agtatcaaagcccagtgctgctacaatccttggctcattgaatgtgaaccagttcttaat 640
Query: 650 gcgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatctt 709
||||| || || ||||| ||||| || ||||||||||| | ||| | | ||| |||||
Sbjct: 639 tcgatcaccataagtcttgaaacaaaattcagcatagtccgcaaatatggtcgcgatctt 580
Query: 710 cgcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaag 769
| |||||| | || |||| ||||||| |||||||||||| | ||||||||||| ||
Sbjct: 579 tgggcttaagaagccatcatacttcttctgaagcgcaagagggatatcatagtggttgag 520
Query: 770 gttga 774
|||||
Sbjct: 519 gttga 515
>gb|CK207361.1|CK207361 FGAS018982 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1118
Score = 93.7 bits (47), Expect = 2e-017
Identities = 140/172 (81%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||| ||||||||||||||||| | |||||||| |||||| |||| |||||||
Sbjct: 192 cggtatctcgcaactgcagtagcatgagacaagagaatgttatgaacaacagtgtaaggc 133
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccct 590
|| ||||| || |||||||| ||||||||| |||||||||| | ||| |||| | |||
Sbjct: 132 tctgttgcggagttcccaccggcagcgcatttggtgcacctgttagggggatccgtccca 73
Query: 591 gtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagt 642
|| ||| ||| || | |||| ||||||||||||||||||| |||||||
Sbjct: 72 gtatcaaagcaaattgctgctagtatccttggctcattgaatgtgaaccagt 21
>gb|BU100234.1|BU100234 WHE3316_G12_N24ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3316_G12_N24,
mRNA sequence
Length = 756
Score = 91.7 bits (46), Expect = 9e-017
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 715 ttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaaggttga 774
||||||| |||||||| |||||||||||||| ||||| ||||| ||||||||||| ||||
Sbjct: 518 ttaaccagcctccatacttcttctcaagcgccagagggagatcgtagtggtaaagattga 459
Query: 775 tgtaaggagtnatgcct 791
| |||||||| ||||||
Sbjct: 458 tataaggagtaatgcct 442
>gb|BE400791.1|BE400791 AWB007.C05F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB007.C05, mRNA sequence
Length = 518
Score = 89.7 bits (45), Expect = 4e-016
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||| ||||||||||||||||| | ||||||| |||||| |||| |||||||
Sbjct: 143 cggtatctcgcaactgcagtagcatgagataagagaatgttatgaacaacagtgtaaggc 84
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacct 571
|| |||||||| |||||||| ||||||||| ||||||||||
Sbjct: 83 tctgttgctgagttcccaccggcagcgcatttggtgcacct 43
>gb|CV782404.1|CV782404 FGAS076817 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 845
Score = 89.7 bits (45), Expect = 4e-016
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 471 cggtatcttgcaactgcagtagcatgtgccaagagaaaattatgagcaactatgtaaggt 530
|||||||| ||||||||||||||||| | |||||||| |||||| |||| |||||||
Sbjct: 235 cggtatctcgcaactgcagtagcatgagacaagagaatgttatgaacaacagtgtaaggc 176
Query: 531 tcggttgctgaattcccaccagcagcgcatctggtgcacct 571
|| ||||| || |||||||| ||||||||| ||||||||||
Sbjct: 175 tctgttgcggagttcccaccggcagcgcatttggtgcacct 135
>gb|BE412197.1|BE412197 JJL003.G02R990515 ITEC JJL Wheat Leaf Library Triticum aestivum
cDNA clone JJL003.G02, mRNA sequence
Length = 749
Score = 79.8 bits (40), Expect = 3e-013
Identities = 190/241 (78%)
Strand = Plus / Minus
Query: 534 gttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggatttgaccctgtg 593
|||||||| |||||||| ||||||||| |||||||||| | ||| || || | || ||
Sbjct: 398 gttgctgagttcccaccggcagcgcatttggtgcacctgttaggggggttcgttccagta 339
Query: 594 tcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgctttacgcga 653
||| |||| ||| ||||| |||||||||||||||||| ||||||| ||| | |||
Sbjct: 338 tcaaagcccagtgctgctacaatccttggctcattgaatgtgaaccagttcttaattcga 279
Query: 654 tcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgccatcttcgcg 713
|| || || ||||| ||||| || ||||||||||| | ||| | | ||| ||||| | |
Sbjct: 278 tcaccataagtcttgaaacaaaattcagcatagtccgcaaatatggtcgcgatctttggg 219
Query: 714 cttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtggtaaaggttg 773
||||| | || |||| ||||||| |||||||||||| | ||||||||||| ||||||
Sbjct: 218 cttaagaagccatcatacttcttctgaagcgcaagagggatatcatagtggttgaggttg 159
Query: 774 a 774
|
Sbjct: 158 a 158
>gb|CK161716.1|CK161716 FGAS014289 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1126
Score = 75.8 bits (38), Expect = 5e-012
Identities = 196/250 (78%)
Strand = Plus / Minus
Query: 525 taaggttcggttgctgaattcccaccagcagcgcatctggtgcacctttgaggaggattt 584
||||| || |||||||| |||||||| |||| |||| |||||||||| | ||| || ||
Sbjct: 812 taaggctctgttgctgagttcccaccggcagggcatttggtgcacctgttaggggggttc 753
Query: 585 gaccctgtgtcatagccaagtagcgctactatccttggctcattgaatnnnaaccagtgc 644
| || || ||| |||| ||| ||||| |||||||||||||||||| ||||||| |
Sbjct: 752 gttccagtatcaaagcccagtgctgctacaatccttggctcattgaatgtgaaccagttc 693
Query: 645 tttacgcgatcgccgtaggtcttaaaacagaagtcagcatagtctgtaaacaagtccgcc 704
|| | ||||| || || ||||| ||||| || ||||||||||| | ||| | | |||
Sbjct: 692 ttnattcgatcaccataagtcttgaaacaaaattcagcatagtccgcaaatatggtcgcg 633
Query: 705 atcttcgcgcttaaccaccctccatatttcttctcaagcgcaagaggaagatcatagtgg 764
||||| | |||||| | || |||| ||||||| |||||||||||| | ||||||||||
Sbjct: 632 atctttgggcttaagaagccatcatacttcttctgaagcgcaagagggatatcatagtgg 573
Query: 765 taaaggttga 774
| |||||||
Sbjct: 572 ttgaggttga 563
>gb|BF478520.1|BF478520 WHE2009_F08_K15ZS Chinese Spring wheat drought stressed leaf cDNA
library Triticum aestivum cDNA clone WHE2009_F08_K15,
mRNA sequence
Length = 454
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 261 ccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtttg 320
|||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |
Sbjct: 109 ccatggacagggaggccagggtgcaccggtacagggagaagaggaagatgaggcggttcg 168
Query: 321 agaagaccat 330
||||||||||
Sbjct: 169 agaagaccat 178
>gb|BG909245.1|BG909245 TaLr1175D10R TaLr1 Triticum aestivum cDNA clone TaLr1175D10 5',
mRNA sequence
Length = 582
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 261 ccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtttg 320
|||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |
Sbjct: 434 ccatggacagggaggccagggtgcaccggtacagggagaagaggaagatgaggcggttcg 375
Query: 321 agaagaccat 330
||||||||||
Sbjct: 374 agaagaccat 365
>gb|BQ243945.1|BQ243945 TaE15007A04F TaE15 Triticum aestivum cDNA clone TaE15007A04F, mRNA
sequence
Length = 637
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 261 ccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtttg 320
|||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |
Sbjct: 419 ccatggacagggaggccagggtgcaccggtacagggagaagaggaagatgaggcggttcg 360
Query: 321 agaagaccat 330
||||||||||
Sbjct: 359 agaagaccat 350
>gb|CA626904.1|CA626904 wl1n.pk0145.a2 wl1n Triticum aestivum cDNA clone wl1n.pk0145.a2 5'
end, mRNA sequence
Length = 302
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 261 ccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtttg 320
|||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |
Sbjct: 180 ccatggacagggaggccagggtgcaccggtacagggagaagaggaagatgaggcggttcg 239
Query: 321 agaagaccat 330
||||||||||
Sbjct: 240 agaagaccat 249
>gb|CD873600.1|CD873600 AZO3.100D24R011123 AZO3 Triticum aestivum cDNA clone AZO3100D24,
mRNA sequence
Length = 707
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 261 ccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtttg 320
|||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |
Sbjct: 370 ccatggacagggaggccagggtgcaccggtacagggagaagaggaagatgaggcggttcg 311
Query: 321 agaagaccat 330
||||||||||
Sbjct: 310 agaagaccat 301
>gb|CD873979.1|CD873979 AZO3.101B12R011123 AZO3 Triticum aestivum cDNA clone AZO3101B12,
mRNA sequence
Length = 645
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 261 ccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtttg 320
|||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |
Sbjct: 370 ccatggacagggaggccagggtgcaccggtacagggagaagaggaagatgaggcggttcg 311
Query: 321 agaagaccat 330
||||||||||
Sbjct: 310 agaagaccat 301
>gb|CD881977.1|CD881977 F1.104O15R010628 F1 Triticum aestivum cDNA clone F1104O15, mRNA
sequence
Length = 556
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 261 ccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtttg 320
|||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |
Sbjct: 378 ccatggacagggaggccagggtgcaccggtacagggagaagaggaagatgaggcggttcg 319
Query: 321 agaagaccat 330
||||||||||
Sbjct: 318 agaagaccat 309
>gb|CD886316.1|CD886316 G118.101P20F010601 G118 Triticum aestivum cDNA clone G118101P20,
mRNA sequence
Length = 551
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 261 ccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtttg 320
|||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |
Sbjct: 137 ccatggacagggaggccagggtgcaccggtacagggagaagaggaagatgaggcggttcg 196
Query: 321 agaagaccat 330
||||||||||
Sbjct: 197 agaagaccat 206
>gb|CK212500.1|CK212500 FGAS024374 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1070
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 261 ccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtttg 320
|||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |
Sbjct: 448 ccatggacagggaggccagggtgcaccggtacagggagaagaggaagatgaggcggttcg 389
Query: 321 agaagaccat 330
||||||||||
Sbjct: 388 agaagaccat 379
>emb|AX658810.1| Sequence 83 from Patent WO03000904
Length = 734
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 261 ccatggacagggaggccagggtgctgaggtacagggagaagaagaagagcaggaagtttg 320
|||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |
Sbjct: 317 ccatggacagggaggccagggtgcaccggtacagggagaagaggaagatgaggcggttcg 376
Query: 321 agaagaccat 330
||||||||||
Sbjct: 377 agaagaccat 386
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 185,133
Number of Sequences: 636343
Number of extensions: 185133
Number of successful extensions: 54538
Number of sequences better than 0.5: 68
Number of HSP's better than 0.5 without gapping: 67
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 54376
Number of HSP's gapped (non-prelim): 149
length of query: 1014
length of database: 367,240,239
effective HSP length: 20
effective length of query: 994
effective length of database: 354,513,379
effective search space: 352386298726
effective search space used: 352386298726
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)