BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750753.2.1
(1126 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ620202.1|BQ620202 TaLr1176E11R TaLr1 Triticum aestivum... 157 2e-036
gb|CA498766.1|CA498766 WHE3247_D09_H17ZT Wheat meiotic anth... 157 2e-036
gb|BJ234204.1|BJ234204 BJ234204 Y. Ogihara unpublished cDNA... 141 1e-031
gb|BQ578824.1|BQ578824 WHE0407_B10_D19ZS Wheat etiolated se... 141 1e-031
gb|AL828593.1|AL828593 AL828593 p:739 Triticum aestivum cDN... 141 1e-031
gb|AY902381.1| Triticum aestivum auxin response factor 2 mR... 141 1e-031
gb|BJ301505.1|BJ301505 BJ301505 Y. Ogihara unpublished cDNA... 137 2e-030
gb|CV761661.1|CV761661 FGAS056049 Triticum aestivum FGAS: L... 133 3e-029
gb|BJ305337.1|BJ305337 BJ305337 Y. Ogihara unpublished cDNA... 123 3e-026
gb|CN009908.1|CN009908 WHE3864_B10_C20ZS Wheat Fusarium gra... 117 2e-024
gb|CN010782.1|CN010782 WHE3876_B06_C12ZS Wheat Fusarium gra... 117 2e-024
gb|BJ304916.1|BJ304916 BJ304916 Y. Ogihara unpublished cDNA... 100 4e-019
gb|CF243394.1|CF243394 CCM10 Chinese Spring wheat immature ... 96 6e-018
gb|BJ207936.1|BJ207936 BJ207936 Y. Ogihara unpublished cDNA... 84 2e-014
gb|BG907022.1|BG907022 TaLr1156E09R TaLr1 Triticum aestivum... 82 1e-013
gb|BG907523.1|BG907523 TaLr1160F10R TaLr1 Triticum aestivum... 82 1e-013
gb|BQ241700.1|BQ241700 TaE05001H09R TaE05 Triticum aestivum... 62 9e-008
gb|DR741754.1|DR741754 FGAS030799 Triticum aestivum FGAS: L... 56 5e-006
gb|CA657827.1|CA657827 wlm0.pk039.p11 wlm0 Triticum aestivu... 54 2e-005
gb|CA733774.1|CA733774 wlp1c.pk006.j21 wlp1c Triticum aesti... 50 3e-004
gb|CA497106.1|CA497106 WHE3223_B08_D15ZT Wheat meiotic anth... 46 0.005
gb|CA500766.1|CA500766 WHE4024_D06_H12ZT Wheat meiotic anth... 46 0.005
gb|CA501261.1|CA501261 WHE4031_D07_H13ZT Wheat meiotic anth... 46 0.005
gb|CV767919.1|CV767919 FGAS062310 Triticum aestivum FGAS: L... 46 0.005
gb|BJ208165.1|BJ208165 BJ208165 Y. Ogihara unpublished cDNA... 44 0.021
gb|BJ214159.1|BJ214159 BJ214159 Y. Ogihara unpublished cDNA... 44 0.021
gb|AY376130.1| Triticum aestivum ETTIN-like auxin response ... 44 0.021
>gb|BQ620202.1|BQ620202 TaLr1176E11R TaLr1 Triticum aestivum cDNA clone TaLr1176E11R, mRNA
sequence
Length = 702
Score = 157 bits (79), Expect = 2e-036
Identities = 348/435 (80%), Gaps = 2/435 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||| ||||||
Sbjct: 193 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggtttctccgtgctg 252
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || || ||||| || || || ||||| ||||||| ||| |||||||||||
Sbjct: 253 cgccgccacgctgacgagtgcctccctcccctggacatgacccagtcg-cctccaacaca 311
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||||||| || ||||| |||||||| |||| |||||||| |||||||| ||| | ||
Sbjct: 312 agagcttgttgcaaaggatctgcatggcatggactggcgcttccgccacatcttccgtgg 371
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | ||||| || |||||||| ||||| ||| |||| | ||
Sbjct: 372 gcaacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggct 431
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| ||||| ||||||||||| ||||| ||||| || ||||| ||||||||||| || ||
Sbjct: 432 tgtagctggggatgccttcatttttctcagaggagagagtggtgagcttcgtgttggtgt 491
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcat 414
||||| || ||||| |||| | || || || |||||||| ||||| || || |||||
Sbjct: 492 taggcgggctatgagacagctgtccaacgtgccttcttcagtcatatctagtcatagcat 551
Query: 415 gcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgt 474
||| ||||| || ||||| || ||||||||||| | ||||| | |||||| |||||
Sbjct: 552 gcaccttggagtccttgcaactgcatggcatgccatcaacacgaaaagcatgttcactgt 611
Query: 475 ctactacaagcctag 489
||||||||| |||||
Sbjct: 612 ctactacaaacctag 626
>gb|CA498766.1|CA498766 WHE3247_D09_H17ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3247_D09_H17, mRNA sequence
Length = 597
Score = 157 bits (79), Expect = 2e-036
Identities = 348/435 (80%), Gaps = 2/435 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||| ||||||
Sbjct: 132 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggtttctccgtgctg 191
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || || ||||| || || || ||||| ||||||| ||| |||||||||||
Sbjct: 192 cgccgccacgctgacgagtgcctccctcccctggacatgacccagtcg-cctccaacaca 250
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||||||| || ||||| |||||||| |||| |||||||| |||||||| ||| | ||
Sbjct: 251 agagcttgttgcaaaggatctgcatggcatggactggcgcttccgccacatcttccgtgg 310
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | ||||| || |||||||| ||||| ||| |||| | ||
Sbjct: 311 gcaacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggct 370
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| ||||| ||||||||||| ||||| ||||| || ||||| ||||||||||| || ||
Sbjct: 371 tgtagctggggatgccttcatttttctcagaggagagagtggtgagcttcgtgttggtgt 430
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcat 414
||||| || ||||| |||| | || || || |||||||| ||||| || || |||||
Sbjct: 431 taggcgggctatgagacagctgtccaacgtgccttcttcagtcatatctagtcatagcat 490
Query: 415 gcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgt 474
||| ||||| || ||||| || ||||||||||| | ||||| | |||||| |||||
Sbjct: 491 gcaccttggagtccttgcaactgcatggcatgccatcaacacgaaaagcatgttcactgt 550
Query: 475 ctactacaagcctag 489
||||||||| |||||
Sbjct: 551 ctactacaaacctag 565
>gb|BJ234204.1|BJ234204 BJ234204 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe9b13 5', mRNA sequence
Length = 658
Score = 141 bits (71), Expect = 1e-031
Identities = 346/435 (79%), Gaps = 2/435 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||| ||||||
Sbjct: 173 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggtttctccgtgctg 232
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || || ||||| || || || ||||| ||||||| ||| |||||||||||
Sbjct: 233 cgccgccacgctgacgagtgcctccctcccctggacatgacccagtcg-cctccaacaca 291
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||||||| || ||||| |||||||| |||| |||||||| |||||||| ||| | ||
Sbjct: 292 agagcttgtggcaaaggatctgcatggcatggactggcgcttccgccacatcttccgcgg 351
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | ||||| || |||||||| ||||| ||| |||| | ||
Sbjct: 352 gcaacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggct 411
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| ||||| ||||||||||| || || ||||| || ||||| ||||||||||| || ||
Sbjct: 412 tgtagctggggatgccttcattttcctcagaggagagagtggtgagcttcgtgttggtgt 471
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcat 414
||||| || ||||| |||| | || || || |||||||| ||||| || || |||||
Sbjct: 472 taggcgggctatgagacagctgtccaacgtgccttcttcagtcatatctagtcatagcat 531
Query: 415 gcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgt 474
||| ||||| || ||||| || |||||||| || | ||||| | |||||| |||||
Sbjct: 532 gcaccttggagtccttgcaactgcatggcacgccatcaacacgaaaagcatgttcactgt 591
Query: 475 ctactacaagcctag 489
||||||||| |||||
Sbjct: 592 ctactacaaacctag 606
>gb|BQ578824.1|BQ578824 WHE0407_B10_D19ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0407_B10_D19, mRNA
sequence
Length = 780
Score = 141 bits (71), Expect = 1e-031
Identities = 346/435 (79%), Gaps = 2/435 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||| ||||||
Sbjct: 185 tccttctgcaagaccctgacggcatccgacaccagcacgcatggcggtttctccgtgctg 244
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || || ||||| || || || ||||| ||||||| ||| |||||||||||
Sbjct: 245 cgccgccacgctgacgagtgcctccctcccctggacatgacccagtcg-cctccaacaca 303
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||||||| || ||||| |||||||| |||| |||||||| |||||||| ||| | ||
Sbjct: 304 agagcttgtggcaaaggatctgcatggcatggactggcgcttccgccacatcttccgcgg 363
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | ||||| || |||||||| ||||| ||| |||| | ||
Sbjct: 364 gcaacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggct 423
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| ||||| ||||||||||| || || ||||| || ||||| ||||||||||| || ||
Sbjct: 424 tgtagctggggatgccttcattttcctcagaggagagagtggtgagcttcgtgttggtgt 483
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcat 414
||||| || ||||| |||| | || || || |||||||| ||||| || || |||||
Sbjct: 484 taggcgggctatgagacagctgtccaacgtgccttcttcagtcatatctagtcatagcat 543
Query: 415 gcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgt 474
||| ||||| || ||||| || |||||||| || | ||||| | |||||| |||||
Sbjct: 544 gcaccttggagtccttgcaactgcatggcacgccatcaacacgaaaagcatgttcactgt 603
Query: 475 ctactacaagcctag 489
||||||||| |||||
Sbjct: 604 ctactacaaacctag 618
Score = 46.1 bits (23), Expect = 0.005
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 562 gggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggttcactgg 619
||||||||||| | ||||||||| ||||||||||||| ||||| || ||||| |||||
Sbjct: 689 gggatgagattcaggatgaggtttgaaggtgaagaggcgccagagcagaggtttactgg 747
>gb|AL828593.1|AL828593 AL828593 p:739 Triticum aestivum cDNA clone C10_p739_plate_6, mRNA
sequence
Length = 521
Score = 141 bits (71), Expect = 1e-031
Identities = 328/411 (79%), Gaps = 2/411 (0%)
Strand = Plus / Plus
Query: 86 accagcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtcttccgcca 145
|||||||| ||||| || |||||||||||||| ||||| || || ||||| || || ||
Sbjct: 11 accagcacacatggcggcttctcggtgctgcgccgccacgctgacgagtgcctccctccc 70
Query: 146 ctggatatgaccc-gtcaacctccaacacaagagcttgtagccaaggacctgcatggtgt 204
||||||||||| | ||| ||||| |||||||||||||| || ||||| || ||||| |
Sbjct: 71 ctggatatgacgcagtct-cctcccacacaagagcttgtggcaaaggatcttcatggcat 129
Query: 205 ggaatggcgctttcgccacatattcagaggtcaaccacgaaggcatcttttgcagagtgg 264
||| |||||||| |||||||| ||| | || ||||| | |||||||| | ||||| ||
Sbjct: 130 ggagtggcgcttccgccacattttccgcgggcaacctaggaggcatctccttcagagcgg 189
Query: 265 ctggagtgtttttgttagtgccaagcgtcttggtgctggagatgccttcatctttctaag 324
|||||| || ||||| ||| |||| | |||| ||||| || |||||||| || || ||
Sbjct: 190 ctggagcgtctttgtcagttccaaaaggcttgtcgctggggacgccttcattttcctcag 249
Query: 325 aggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgt 384
||| || || || ||||||||||| || || ||||| || ||||| |||| | ||| |
Sbjct: 250 aggagagagcggtgagcttcgtgttggtgttaggcgggctatgagacagctctccaatat 309
Query: 385 tccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggca 444
| |||||||| ||||| || ||||||||||| ||||| || ||||| || ||||||||
Sbjct: 310 agcttcttcagtcatatctagtcacagcatgcaccttggagtccttgcaactgcatggca 369
Query: 445 tgctgttaacactgggaccatgtttactgtctactacaagcctaggacaag 495
||| | ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 370 cgctatcaacacaaaaaccatgttcactgtctactacaagcctaggacaag 420
>gb|AY902381.1| Triticum aestivum auxin response factor 2 mRNA, partial cds
Length = 608
Score = 141 bits (71), Expect = 1e-031
Identities = 328/411 (79%), Gaps = 2/411 (0%)
Strand = Plus / Plus
Query: 86 accagcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtcttccgcca 145
|||||||| || || || |||||||||||||| ||||| || |||||||| || || ||
Sbjct: 12 accagcacgcacggcggcttctcggtgctgcgccgccacgctgatgagtgcctccctccc 71
Query: 146 ctggatatgaccc-gtcaacctccaacacaagagcttgtagccaaggacctgcatggtgt 204
||||||||||| | ||| ||||| |||||||||||||| || ||||| || ||||| |
Sbjct: 72 ctggatatgacgcagtct-cctcccacacaagagcttgtggcaaaggatcttcatggcat 130
Query: 205 ggaatggcgctttcgccacatattcagaggtcaaccacgaaggcatcttttgcagagtgg 264
||| |||||||| |||||||| ||| | || ||||| | |||||||| | ||||| ||
Sbjct: 131 ggagtggcgcttccgccacattttccgcgggcaacctaggaggcatctccttcagagcgg 190
Query: 265 ctggagtgtttttgttagtgccaagcgtcttggtgctggagatgccttcatctttctaag 324
|||||| || ||||| ||| |||| | |||| ||||| || |||||||| || || ||
Sbjct: 191 ctggagcgtctttgtcagttccaaaaggcttgtcgctggggacgccttcattttcctcag 250
Query: 325 aggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgt 384
||| || || || ||||||||||| || || ||||| || ||||| |||| | ||| |
Sbjct: 251 aggagagagcggcgagcttcgtgttggtgttaggcgggctatgagacagctctccaatat 310
Query: 385 tccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatggca 444
| |||||||| ||||| || ||||||||||| ||||| || ||||| || ||||||||
Sbjct: 311 agcttcttcagtcatatctagtcacagcatgcaccttggagtccttgcaactgcatggca 370
Query: 445 tgctgttaacactgggaccatgtttactgtctactacaagcctaggacaag 495
||| | ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 371 cgctatcaacacaaaaaccatgttcactgtctactacaagcctaggacaag 421
>gb|BJ301505.1|BJ301505 BJ301505 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd10o04 5', mRNA sequence
Length = 613
Score = 137 bits (69), Expect = 2e-030
Identities = 350/441 (79%), Gaps = 2/441 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||||||||||
Sbjct: 48 tccttctgcaagaccctgaccgcgtccgacaccagcacacatggcggcttctcggtgctg 107
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || || ||||| || || || || |||||||| | ||| ||||| |||||
Sbjct: 108 cgccgccacgctgacgagtgcctccctcccctagatatgacgcagtct-cctcccacaca 166
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||||||| || ||||| || ||||| |||| |||||||| |||||||| ||| | ||
Sbjct: 167 agagcttgtggcaaaggatcttcatggcatggagtggcgcttccgccacattttccgcgg 226
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | ||||| |||||||| || ||||| ||| |||| | ||
Sbjct: 227 gcaacctaggaggcatctccttcagagcggctggagcgtctttgtcagttccaaaaggct 286
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| ||||| || |||||||| || || ||||| || || || ||||||||||| || ||
Sbjct: 287 tgtcgctggggacgccttcattttcctcagaggagagagcggtgagcttcgtgttggtgt 346
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcat 414
||||| || ||||| ||| | ||| | | |||||||| ||||| || ||||||||
Sbjct: 347 taggcgggctatgagacagttctccaatatagcttcttcagtcatatctagtcacagcat 406
Query: 415 gcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgt 474
||| ||||| || ||||| || |||||||| ||| | ||||| |||||||| |||||
Sbjct: 407 gcaccttggagtccttgcaactgcatggcacgctatcaacacaaaaaccatgttcactgt 466
Query: 475 ctactacaagcctaggacaag 495
|||||||||||||||||||||
Sbjct: 467 ctactacaagcctaggacaag 487
>gb|CV761661.1|CV761661 FGAS056049 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 847
Score = 133 bits (67), Expect = 3e-029
Identities = 351/442 (79%), Gaps = 3/442 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||||||||||
Sbjct: 248 tccttctgcaagaccctgaccgcgtccgacaccagcacacatggcggcttctcggtgctg 307
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || || ||||| || || || ||||||||||| | ||| ||||| |||||
Sbjct: 308 cgccgccacgctgacgagtgcctccctcccctggatatgacgcagtct-cctcccacaca 366
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||||||| || ||||| || ||||| |||| |||||||| |||||||| ||| | ||
Sbjct: 367 agagcttgtggcaaaggatcttcatggcatggagtggcgcttccgccacattttccgcgg 426
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | ||||| |||||||| || ||||| ||| |||| | ||
Sbjct: 427 gcaacctaggaggcatctccttcagagcggctggagcgtctttgtcagttccaaaaggct 486
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| ||||| || |||||||| || || ||||| || || || ||||||||||| || ||
Sbjct: 487 tgtcgctggggacgccttcattttcctcagaggagagagcggtgagcttcgtgttggtgt 546
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatc-ttcagtaatatcaagccacagca 413
||||| || ||||| |||| | ||| | | || |||||| ||||| || |||||||
Sbjct: 547 taggcgggctatgagacagctctccaatatagcttccttcagtcatatctagtcacagca 606
Query: 414 tgcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactg 473
|||| ||||| || ||||| || |||||||| ||| | ||||| |||||||| ||||
Sbjct: 607 tgcaccttggagtccttgcaactgcatggcacgctatcaacacaaaaaccatgttcactg 666
Query: 474 tctactacaagcctaggacaag 495
|||||||| |||||||||||||
Sbjct: 667 tctactacnagcctaggacaag 688
>gb|BJ305337.1|BJ305337 BJ305337 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd29n08 5', mRNA sequence
Length = 649
Score = 123 bits (62), Expect = 3e-026
Identities = 310/390 (79%), Gaps = 2/390 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||| ||||||
Sbjct: 223 tccttctgcaagactctgacggcatccgacaccagcacgcatggcggtttctccgtgctg 282
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || || ||||| || || || ||||| ||||||| ||| |||||||||||
Sbjct: 283 cgccgccacgctgacgagtgcctccctcccctggacatgacccagtcg-cctccaacaca 341
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||||||| || ||||| |||||||| |||| |||||||| |||||||| ||| | ||
Sbjct: 342 agagcttgtggcaaaggatctgcatggcatggactggcgcttccgccacatcttccgtgg 401
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | ||||| || |||||||| ||||| ||| |||| | ||
Sbjct: 402 gcaacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggct 461
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| || || ||||||||||| || || ||||| || ||||| ||||||||||| || ||
Sbjct: 462 tgtagccggggatgccttcattttcctcagaggagagagtggtgagcttcgtgttggtgt 521
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcat 414
||| | || ||||| |||| | || || || |||||||| ||||| || || |||||
Sbjct: 522 taggagggctatgagacagctgcccaacgtgccttcttcagtcatatctagtcatagcat 581
Query: 415 gcatcttggtgttcttgctacagcatggca 444
||| ||||| || ||||| || ||||||||
Sbjct: 582 gcaccttggagtccttgcaactgcatggca 611
>gb|CN009908.1|CN009908 WHE3864_B10_C20ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3864_B10_C20,
mRNA sequence
Length = 605
Score = 117 bits (59), Expect = 2e-024
Identities = 343/435 (78%), Gaps = 2/435 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||| ||||||
Sbjct: 122 tccttctgcaagactctgacggcatccgacaccagcacgcatggcggtttctccgtgctg 181
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || || ||||| || || || ||||| ||| ||| ||| |||||||||||
Sbjct: 182 cgccgccacgctgacgagtgcctccctcccctggacatggcccagtcg-cctccaacaca 240
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||||||| || ||||| |||||||| |||| |||||||| |||||||| ||| | ||
Sbjct: 241 agagcttgtggcaaaggatctgcatggcatggactggcgcttccgccacatcttccgtgg 300
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | ||||| || |||||||| ||||| ||| |||| | ||
Sbjct: 301 gcaacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggct 360
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| || || ||||||||||| || || ||||| || ||||| ||||||||||| || ||
Sbjct: 361 tgtagccggggatgccttcattttcctcagaggagagagtggtgagcttcgtgttggtgt 420
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcat 414
||| | || ||||| |||| | || || || |||||||| ||||| || || |||||
Sbjct: 421 taggagggctatgagacagctgtccaacgtgccttcttcagtcatatctagtcatagcat 480
Query: 415 gcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgt 474
||| ||||| || ||||| || |||||||| || | ||||| | |||||| |||||
Sbjct: 481 gcaccttggagtccttgcaactgcatggcacgccatcaacacgaaaagcatgttcactgt 540
Query: 475 ctactacaagcctag 489
||||||||| |||||
Sbjct: 541 ctactacaaacctag 555
>gb|CN010782.1|CN010782 WHE3876_B06_C12ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3876_B06_C12,
mRNA sequence
Length = 646
Score = 117 bits (59), Expect = 2e-024
Identities = 343/435 (78%), Gaps = 2/435 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||| ||||||
Sbjct: 131 tccttctgcaagactctgacggcatccgacaccagcacgcatggcggtttctccgtgctg 190
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || || ||||| || || || ||||| ||| ||| ||| |||||||||||
Sbjct: 191 cgccgccacgctgacgagtgcctccctcccctggacatggcccagtcg-cctccaacaca 249
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||||||| || ||||| |||||||| |||| |||||||| |||||||| ||| | ||
Sbjct: 250 agagcttgtggcaaaggatctgcatggcatggactggcgcttccgccacatcttccgtgg 309
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | ||||| || |||||||| ||||| ||| |||| | ||
Sbjct: 310 gcaacctaggaggcatctccttcagagcggttggagtgtgtttgtcagttccaaaaggct 369
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| || || ||||||||||| || || ||||| || ||||| ||||||||||| || ||
Sbjct: 370 tgtagccggggatgccttcattttcctcagaggagagagtggtgagcttcgtgttggtgt 429
Query: 355 caggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcat 414
||| | || ||||| |||| | || || || |||||||| ||||| || || |||||
Sbjct: 430 taggagggctatgagacagctgtccaacgtgccttcttcagtcatatctagtcatagcat 489
Query: 415 gcatcttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgt 474
||| ||||| || ||||| || |||||||| || | ||||| | |||||| |||||
Sbjct: 490 gcaccttggagtccttgcaactgcatggcacgccatcaacacgaaaagcatgttcactgt 549
Query: 475 ctactacaagcctag 489
||||||||| |||||
Sbjct: 550 ctactacaaacctag 564
>gb|BJ304916.1|BJ304916 BJ304916 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd8p17 5', mRNA sequence
Length = 662
Score = 99.6 bits (50), Expect = 4e-019
Identities = 257/326 (78%)
Strand = Plus / Plus
Query: 164 cctccaacacaagagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccac 223
|||||||||||||||||||| || ||||| |||||||| |||| |||||||| ||||||
Sbjct: 59 cctccaacacaagagcttgtggcaaaggatctgcatggcatggactggcgcttccgccac 118
Query: 224 atattcagaggtcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagt 283
|| ||| | || ||||| | |||||||| | ||||| || |||||||| ||||| |||
Sbjct: 119 atcttccgtgggcaacctaggaggcatctccttcagagcggttggagtgtgtttgtcagt 178
Query: 284 gccaagcgtcttggtgctggagatgccttcatctttctaagaggtgatagtggggagctt 343
|||| | |||| || || ||||||||||| || || ||||| || ||||| ||||||
Sbjct: 179 tccaaaaggcttgtagccggggatgccttcattttcctcagaggagagagtggtgagctt 238
Query: 344 cgtgtaggagtcaggcgtgccatgaggcagcaagcaaatgttccatcttcagtaatatca 403
||||| || || ||| | || ||||| |||| | || || || |||||||| |||||
Sbjct: 239 cgtgttggtgttaggagggctatgagacagctgcccaacgtgccttcttcagtcatatct 298
Query: 404 agccacagcatgcatcttggtgttcttgctacagcatggcatgctgttaacactgggacc 463
|| || |||||||| ||||| || ||||| || |||||||| || | ||||| | |
Sbjct: 299 agtcatagcatgcaccttggagtccttgcaactgcatggcacgccatcaacacgaaaagc 358
Query: 464 atgtttactgtctactacaagcctag 489
||||| |||||||||||||| |||||
Sbjct: 359 atgttcactgtctactacaaacctag 384
>gb|CF243394.1|CF243394 CCM10 Chinese Spring wheat immature spikelet cDNA Triticum aestivum
cDNA 5' similar to auxin response factor-like protein;
most similar to auxin response factor 9 and 1, mRNA
sequence
Length = 654
Score = 95.6 bits (48), Expect = 6e-018
Identities = 254/320 (79%), Gaps = 2/320 (0%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| | || || || || |||||||| ||||| || ||||| ||||||
Sbjct: 234 tccttctgcaagacgctcactgcgtccgacaccagcacacatggcggcttctccgtgctg 293
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || |||||||| || || || ||||||||||| | ||| ||||| |||||
Sbjct: 294 cgccgccacgctgatgagtgcctccctcccctggatatgacgcagtct-cctcccacaca 352
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctttcgccacatattcagagg 234
||||||||| || ||||| || ||||| |||| |||||||| |||||||| ||| | ||
Sbjct: 353 agagcttgtggcaaaggatcttcatggcatggagtggcgcttccgccacattttccgcgg 412
Query: 235 tcaaccacgaaggcatcttttgcagagtggctggagtgtttttgttagtgccaagcgtct 294
||||| | |||||||| | ||||| |||||||| || ||||| ||| |||| | ||
Sbjct: 413 gcaacctaggaggcatctccttcagagcggctggagcgtctttgtcagttccaaaaggct 472
Query: 295 tggtgctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagt 354
|| ||||| || |||||||| || || ||||| || || || ||||||||||| || ||
Sbjct: 473 tgtcgctggggacgccttcattttcctcagaggagagagcggcgagcttcgtgttggtgt 532
Query: 355 caggcgtgccatgaggcagc 374
||||| || ||||| ||||
Sbjct: 533 gaggcgggctatgagacagc 552
>gb|BJ207936.1|BJ207936 BJ207936 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh6b03 5', mRNA sequence
Length = 408
Score = 83.8 bits (42), Expect = 2e-014
Identities = 134/162 (82%), Gaps = 2/162 (1%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||| ||||||
Sbjct: 245 tccttctgcaagactctgacggcatccgacaccagcacgcatggcggtttctccgtgctg 304
Query: 116 cggcgccatgcagatgagtgtcttccgccactggatatgaccc-gtcaacctccaacaca 174
|| ||||| || || ||||| || || || ||||| ||||||| ||| |||||||||||
Sbjct: 305 cgccgccacgctgacgagtgcctccctcccctggacatgacccagtcg-cctccaacaca 363
Query: 175 agagcttgtagccaaggacctgcatggtgtggaatggcgctt 216
||||||||| || ||||| |||||||| |||| ||||||||
Sbjct: 364 agagcttgtggcaaaggatctgcatggcatggactggcgctt 405
>gb|BG907022.1|BG907022 TaLr1156E09R TaLr1 Triticum aestivum cDNA clone TaLr1156E09 5',
mRNA sequence
Length = 649
Score = 81.8 bits (41), Expect = 1e-013
Identities = 185/233 (79%)
Strand = Plus / Plus
Query: 257 cagagtggctggagtgtttttgttagtgccaagcgtcttggtgctggagatgccttcatc 316
||||| || |||||||| ||||| ||| |||| | |||| ||||| |||||||||||
Sbjct: 28 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgccttcatt 87
Query: 317 tttctaagaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaa 376
||||| ||||| || ||||| ||||||||||| || || ||||| || ||||| ||||
Sbjct: 88 tttctcagaggagagagtggtgagcttcgtgttggtgttaggcgggctatgagacagctg 147
Query: 377 gcaaatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctaca 436
| || || || |||||||| ||||| || || |||||||| ||||| || ||||| ||
Sbjct: 148 tccaacgtgccttcttcagtcatatctagtcatagcatgcaccttggagtccttgcaact 207
Query: 437 gcatggcatgctgttaacactgggaccatgtttactgtctactacaagcctag 489
||||||||||| | ||||| | |||||| |||||||||||||| |||||
Sbjct: 208 gcatggcatgccatcaacacgaaaagcatgttcactgtctactacaaacctag 260
Score = 46.1 bits (23), Expect = 0.005
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 562 gggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggttcactgg 619
||||||||||| | ||||||||| ||||||||||||| ||||| || ||||| |||||
Sbjct: 331 gggatgagattcaggatgaggtttgaaggtgaagaggcgccagagcagaggtttactgg 389
>gb|BG907523.1|BG907523 TaLr1160F10R TaLr1 Triticum aestivum cDNA clone TaLr1160F10 5',
mRNA sequence
Length = 630
Score = 81.8 bits (41), Expect = 1e-013
Identities = 185/233 (79%)
Strand = Plus / Plus
Query: 257 cagagtggctggagtgtttttgttagtgccaagcgtcttggtgctggagatgccttcatc 316
||||| || |||||||| ||||| ||| |||| | |||| ||||| |||||||||||
Sbjct: 28 cagagcggttggagtgtgtttgtcagttccaaaaggcttgtagctggggatgccttcatt 87
Query: 317 tttctaagaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaa 376
||||| ||||| || ||||| ||||||||||| || || ||||| || ||||| ||||
Sbjct: 88 tttctcagaggagagagtggtgagcttcgtgttggtgttaggcgggctatgagacagctg 147
Query: 377 gcaaatgttccatcttcagtaatatcaagccacagcatgcatcttggtgttcttgctaca 436
| || || || |||||||| ||||| || || |||||||| ||||| || ||||| ||
Sbjct: 148 tccaacgtgccttcttcagtcatatctagtcatagcatgcaccttggagtccttgcaact 207
Query: 437 gcatggcatgctgttaacactgggaccatgtttactgtctactacaagcctag 489
||||||||||| | ||||| | |||||| |||||||||||||| |||||
Sbjct: 208 gcatggcatgccatcaacacgaaaagcatgttcactgtctactacaaacctag 260
Score = 46.1 bits (23), Expect = 0.005
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 562 gggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggttcactgg 619
||||||||||| | ||||||||| ||||||||||||| ||||| || ||||| |||||
Sbjct: 331 gggatgagattcaggatgaggtttgaaggtgaagaggcgccagagcagaggtttactgg 389
>gb|BQ241700.1|BQ241700 TaE05001H09R TaE05 Triticum aestivum cDNA clone TaE05001H09R, mRNA
sequence
Length = 737
Score = 61.9 bits (31), Expect = 9e-008
Identities = 151/191 (79%)
Strand = Plus / Plus
Query: 299 gctggagatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagtcagg 358
||||| ||||||||||| || || ||||| || ||||| ||||||||||| || || |||
Sbjct: 37 gctggggatgccttcattttcctcagaggagagagtggtgagcttcgtgttggtgttagg 96
Query: 359 cgtgccatgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatgcat 418
|| || ||||| |||| | || || || |||||||| ||||| || || ||||||||
Sbjct: 97 cgggctatgagacagctgtccaacgtgccttcttcagtcatatctagtcatagcatgcac 156
Query: 419 cttggtgttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtctac 478
||||| || ||||| || |||||||| || | ||||| | |||||| |||||||||
Sbjct: 157 cttggagtccttgcaactgcatggcacgccatcaacacgaaaagcatgttcactgtctac 216
Query: 479 tacaagcctag 489
||||| |||||
Sbjct: 217 tacaaacctag 227
Score = 46.1 bits (23), Expect = 0.005
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 562 gggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggttcactgg 619
||||||||||| | ||||||||| ||||||||||||| ||||| || ||||| |||||
Sbjct: 298 gggatgagattcaggatgaggtttgaaggtgaagaggcgccagagcagaggtttactgg 356
>gb|DR741754.1|DR741754 FGAS030799 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1130
Score = 56.0 bits (28), Expect = 5e-006
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 398 atatcaagccacagcatgcatcttggtgttcttgctacag 437
|||||||||||||||||||||||||| || ||||| ||||
Sbjct: 228 atatcaagccacagcatgcatcttggagtccttgcaacag 267
>gb|CA657827.1|CA657827 wlm0.pk039.p11 wlm0 Triticum aestivum cDNA clone wlm0.pk039.p11 5'
end, mRNA sequence
Length = 466
Score = 54.0 bits (27), Expect = 2e-005
Identities = 110/140 (78%)
Strand = Plus / Plus
Query: 86 accagcactcatggtggattctcggtgctgcggcgccatgcagatgagtgtcttccgcca 145
|||| ||| ||||| || ||||| |||||||| ||||| || || ||||| || || ||
Sbjct: 5 accancacgcatgggggnttctccgtgctgcgccgccacgctgacgagtggctccctccc 64
Query: 146 ctggatatgacccgtcaacctccaacacaagagcttgtagccaaggacctgcatggtgtg 205
||||| ||||||| |||||||||||| | ||||| | ||||| |||||||| ||
Sbjct: 65 ctggacatgacccantcgcctccaacacaaaancttgtggnaaaggatctgcatggnatg 124
Query: 206 gaatggcgctttcgccacat 225
|| ||| |||| ||||||||
Sbjct: 125 gactggggcttncgccacat 144
>gb|CA733774.1|CA733774 wlp1c.pk006.j21 wlp1c Triticum aestivum cDNA clone wlp1c.pk006.j21
5' end, mRNA sequence
Length = 612
Score = 50.1 bits (25), Expect = 3e-004
Identities = 145/185 (78%)
Strand = Plus / Plus
Query: 305 gatgccttcatctttctaagaggtgatagtggggagcttcgtgtaggagtcaggcgtgcc 364
||||||||||| || || ||||| || ||||| ||||||||||| || || ||| | ||
Sbjct: 45 gatgccttcattttcctcagaggagagagtggtgagcttcgtgttggtgttaggagggct 104
Query: 365 atgaggcagcaagcaaatgttccatcttcagtaatatcaagccacagcatgcatcttggt 424
||||| |||| | || || || |||||||| ||||| || || |||||||| |||||
Sbjct: 105 atgagacagctgtccaacgtgccttcttcagtcatatctagtcatagcatgcaccttgga 164
Query: 425 gttcttgctacagcatggcatgctgttaacactgggaccatgtttactgtctactacaag 484
|| ||||| || |||||||| || | ||||| | |||||| ||||||||||||||
Sbjct: 165 gtccttgcaactgcatggcacgccatcaacacgaaaagcatgttcactgtctactacaaa 224
Query: 485 cctag 489
|||||
Sbjct: 225 cctag 229
Score = 46.1 bits (23), Expect = 0.005
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 562 gggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggttcactgg 619
||||||||||| || ||||||||| |||| |||||||| ||||| || ||||| |||||
Sbjct: 300 gggatgagattcaagatgaggtttgaaggcgaagaggcaccagagcagaggtttactgg 358
>gb|CA497106.1|CA497106 WHE3223_B08_D15ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3223_B08_D15, mRNA sequence
Length = 425
Score = 46.1 bits (23), Expect = 0.005
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
||||| ||||||||| ||||||| || ||||| || || |||||||| ||||| || ||
Sbjct: 263 tccttttgcaagacactgacagcttcggatacgagtacccatggtggtttctctgttctt 322
Query: 116 cggcgccatgcagatgagtgtcttccgccactgga 150
|| | ||||| || ||||||||||| || |||||
Sbjct: 323 aggaggcatgctgaagagtgtcttcctccgctgga 357
>gb|CA500766.1|CA500766 WHE4024_D06_H12ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4024_D06_H12, mRNA sequence
Length = 655
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 398 atatcaagccacagcatgcatcttggtgttcttgc 432
||||||||||| ||||||||||| || ||||||||
Sbjct: 144 atatcaagccagagcatgcatctcggggttcttgc 178
>gb|CA501261.1|CA501261 WHE4031_D07_H13ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4031_D07_H13, mRNA sequence
Length = 669
Score = 46.1 bits (23), Expect = 0.005
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 562 gggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggttcactgg 619
||||||||||| | ||||||||| ||||||||||||| ||||| || ||||| |||||
Sbjct: 155 gggatgagattcaggatgaggtttgaaggtgaagaggcgccagagcagaggtttactgg 213
>gb|CV767919.1|CV767919 FGAS062310 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 833
Score = 46.1 bits (23), Expect = 0.005
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 562 gggatgagatttaaaatgaggttt-aaggtgaagaggctccagaacaaaggttcactgg 619
||||||||||| | ||||||||| ||||||||||||| ||||| || ||||| |||||
Sbjct: 233 gggatgagattcaggatgaggtttgaaggtgaagaggcgccagagcagaggtttactgg 291
>gb|BJ208165.1|BJ208165 BJ208165 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh7b03 5', mRNA sequence
Length = 248
Score = 44.1 bits (22), Expect = 0.021
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 56 tccttctgcaagacattgacagcctctgataccagcactcatggtggattctcggtgctg 115
|||||||||||||| |||| || || || |||||||| ||||| || ||||| ||||||
Sbjct: 187 tccttctgcaagactctgacggcatccgacaccagcacgcatggcggtttctccgtgctg 246
Query: 116 cg 117
||
Sbjct: 247 cg 248
>gb|BJ214159.1|BJ214159 BJ214159 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26b20 5', mRNA sequence
Length = 583
Score = 44.1 bits (22), Expect = 0.021
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 92 actcatggtggattctcggtgc 113
||||||||||||||||||||||
Sbjct: 397 actcatggtggattctcggtgc 418
>gb|AY376130.1| Triticum aestivum ETTIN-like auxin response factor (ETT-L alpha)
mRNA, partial cds
Length = 2015
Score = 44.1 bits (22), Expect = 0.021
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 230 agaggtcaaccacgaaggcatctttt 255
|||||||||||||| |||||||||||
Sbjct: 202 agaggtcaaccacgtaggcatctttt 227
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 213,708
Number of Sequences: 636343
Number of extensions: 213708
Number of successful extensions: 55508
Number of sequences better than 0.5: 27
Number of HSP's better than 0.5 without gapping: 25
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 55419
Number of HSP's gapped (non-prelim): 66
length of query: 1126
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1106
effective length of database: 354,513,379
effective search space: 392091797174
effective search space used: 392091797174
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)