BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750436.2.1
(656 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ169768.1|BQ169768 WHE0968_B03_C06ZT Wheat pre-anthesis... 270 1e-070
gb|BU100997.1|BU100997 WHE3360_E09_I18ZS Chinese Spring alu... 268 4e-070
gb|BU101093.1|BU101093 WHE3361_E09_J17ZS Chinese Spring alu... 268 4e-070
gb|CA497363.1|CA497363 WHE3226_E10_I20ZT Wheat meiotic anth... 268 4e-070
gb|AL818809.1|AL818809 AL818809 l:125 Triticum aestivum cDN... 230 1e-058
gb|BJ207573.1|BJ207573 BJ207573 Y. Ogihara unpublished cDNA... 210 9e-053
gb|BJ214853.1|BJ214853 BJ214853 Y. Ogihara unpublished cDNA... 210 9e-053
gb|CA616162.1|CA616162 wr1.pk181.g7 wr1 Triticum aestivum c... 109 2e-022
gb|BQ839266.1|BQ839266 WHE4164_B10_C20ZS Wheat CS whole pla... 78 9e-013
gb|CD873580.1|CD873580 AZO3.100D08R011123 AZO3 Triticum aes... 78 9e-013
gb|CV761935.1|CV761935 FGAS056324 Triticum aestivum FGAS: L... 78 9e-013
gb|BQ752895.1|BQ752895 WHE4120_D07_H14ZS Wheat salt-stresse... 74 1e-011
gb|CA641441.1|CA641441 wre1n.pk0045.h7 wre1n Triticum aesti... 74 1e-011
gb|CA663251.1|CA663251 wlmk1.pk0027.g1 wlmk1 Triticum aesti... 74 1e-011
gb|CD490382.1|CD490382 WHE2497_H06_P11ZT Triticum monococcu... 74 1e-011
gb|CD881937.1|CD881937 F1.104M15F010329 F1 Triticum aestivu... 74 1e-011
gb|CD935387.1|CD935387 OV.101G16F010201 OV Triticum aestivu... 74 1e-011
gb|CD935482.1|CD935482 OV.101K08R010424 OV Triticum aestivu... 74 1e-011
gb|CD935483.1|CD935483 OV.101K08R010430 OV Triticum aestivu... 74 1e-011
gb|CK198271.1|CK198271 FGAS006755 Triticum aestivum FGAS: L... 74 1e-011
gb|BG608184.1|BG608184 WHE2497_H06_P11ZS Triticum monococcu... 72 5e-011
gb|CD873579.1|CD873579 AZO3.100D08F010925 AZO3 Triticum aes... 70 2e-010
gb|CF132870.1|CF132870 WHE4351_C07_E13ZT Wheat meiotic flor... 56 3e-006
gb|CD881938.1|CD881938 F1.104M15R010628 F1 Triticum aestivu... 44 0.012
gb|CA727551.1|CA727551 wdi1c.pk001.h22 wdi1c Triticum aesti... 42 0.047
gb|DR733604.1|DR733604 FGAS079362 Triticum aestivum FGAS: L... 42 0.047
>gb|BQ169768.1|BQ169768 WHE0968_B03_C06ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0968_B03_C06, mRNA sequence
Length = 660
Score = 270 bits (136), Expect = 1e-070
Identities = 288/339 (84%)
Strand = Plus / Plus
Query: 318 gaggagcagcaggattatgatgccgatgcagagacacttgcggctgcttctctggtactc 377
|||||||||||| | ||||||| ||||||||| ||||||||||||| | ||||| |||
Sbjct: 241 gaggagcagcagcaggatgatgctgatgcagaggcacttgcggctgccgcgctggtgctc 300
Query: 378 cttggccttgcccagctccttgttgccgccctgcacgtagtgggaggcgttggcgacgtg 437
||||||||| ||||||||||||||| || ||||||| ||||||| |||||
Sbjct: 301 gcgggccttgccgagctccttgttgccggagtggacgtagtccctggcgttgatcacgtg 360
Query: 438 gctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgtcgaggaa 497
| ||||||||||||||| |||||||||||||| || ||| | ||||||||||||||||||
Sbjct: 361 gttctcgatgtcgtcgatcttctccccctgcgactgcacgacgacggccatgtcgaggaa 420
Query: 498 cacttggtggagctccaggaggctgcgttccacctcgcgcgccgcgtcacggcggncctg 557
||| ||||||||||| ||||||||||| |||||||| | || ||||| ||||| ||||
Sbjct: 421 cacctggtggagctcgaggaggctgcgctccacctccccggcggcgtcgtggcggtcctg 480
Query: 558 gatctcgtgcaccgcggcgagcacggcgcccttgccgtgctccgcgacagcggcgcccag 617
|||||||| | |||||||||||||||||||||||||||||| ||||| ||||||| ||
Sbjct: 481 gatctcgttgagcgcggcgagcacggcgcccttgccgtgctcggcgacggcggcgctcat 540
Query: 618 gagctcctcgccgcggtcgtcggagatgatgcgctcgat 656
|| ||||||||||||| | ||||| ||||||||||||||
Sbjct: 541 gatctcctcgccgcggccctcggaaatgatgcgctcgat 579
>gb|BU100997.1|BU100997 WHE3360_E09_I18ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3360_E09_I18,
mRNA sequence
Length = 684
Score = 268 bits (135), Expect = 4e-070
Identities = 320/382 (83%)
Strand = Plus / Minus
Query: 275 acctcctgaggctggtggcgattggcacgatgacaagcaggacgaggagcagcaggatta 334
|||||||||||||||||||||| || |||||||| | |||| |||||||||||| | |
Sbjct: 564 acctcctgaggctggtggcgatggggacgatgacgatgaggatgaggagcagcagcagga 505
Query: 335 tgatgccgatgcagagacacttgcggctgcttctctggtactccttggccttgcccagct 394
|||||||||||||||| ||||||||||||| | ||||| ||| ||||||||| ||||
Sbjct: 504 tgatgccgatgcagaggcacttgcggctgccgcgctggtgctcgcgggccttgccgagct 445
Query: 395 ccttgttgccgccctgcacgtagtgggaggcgttggcgacgtggctctcgatgtcgtcga 454
||||||||||| || ||||||| ||||||| |||||| |||||||| | |
Sbjct: 444 ccttgttgccggagtggacgtagtccctggcgttgctcacgtggtgctcgatgttctgaa 385
Query: 455 gcttctccccctgcgtctccaccatgacggccatgtcgaggaacacttggtggagctcca 514
|||| |||||||||| || || | |||||||||||| |||||||| ||||||||||| |
Sbjct: 384 gcttgtccccctgcgactgtacgacgacggccatgtcaaggaacacctggtggagctcga 325
Query: 515 ggaggctgcgttccacctcgcgcgccgcgtcacggcggncctggatctcgtgcaccgcgg 574
|||||||||| |||||||| | || ||||| ||||| |||||||||||| | |||||
Sbjct: 324 ggaggctgcgctccacctccctggcggcgtcgtggcggtcctggatctcgttgagcgcgg 265
Query: 575 cgagcacggcgcccttgccgtgctccgcgacagcggcgcccaggagctcctcgccgcggt 634
||||||||||||||||||||||||| ||||| ||||||| || || |||||||||||||
Sbjct: 264 cgagcacggcgcccttgccgtgctcggcgacggcggcgctcatgatctcctcgccgcggc 205
Query: 635 cgtcggagatgatgcgctcgat 656
| ||||||||||||||||||||
Sbjct: 204 cctcggagatgatgcgctcgat 183
>gb|BU101093.1|BU101093 WHE3361_E09_J17ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3361_E09_J17,
mRNA sequence
Length = 702
Score = 268 bits (135), Expect = 4e-070
Identities = 320/382 (83%)
Strand = Plus / Minus
Query: 275 acctcctgaggctggtggcgattggcacgatgacaagcaggacgaggagcagcaggatta 334
|||||||||||||||||||||| || |||||||| | |||| |||||||||||| | |
Sbjct: 565 acctcctgaggctggtggcgatggggacgatgacgatgaggatgaggagcagcagcagga 506
Query: 335 tgatgccgatgcagagacacttgcggctgcttctctggtactccttggccttgcccagct 394
|||||||||||||||| ||||||||||||| | ||||| ||| ||||||||| ||||
Sbjct: 505 tgatgccgatgcagaggcacttgcggctgccgcgctggtgctcgcgggccttgccgagct 446
Query: 395 ccttgttgccgccctgcacgtagtgggaggcgttggcgacgtggctctcgatgtcgtcga 454
||||||||||| || ||||||| ||||||| |||||| |||||||| | |
Sbjct: 445 ccttgttgccggagtggacgtagtccctggcgttgctcacgtggtgctcgatgttctgaa 386
Query: 455 gcttctccccctgcgtctccaccatgacggccatgtcgaggaacacttggtggagctcca 514
|||| |||||||||| || || | |||||||||||| |||||||| ||||||||||| |
Sbjct: 385 gcttgtccccctgcgactgtacgacgacggccatgtcaaggaacacctggtggagctcga 326
Query: 515 ggaggctgcgttccacctcgcgcgccgcgtcacggcggncctggatctcgtgcaccgcgg 574
|||||||||| |||||||| | || ||||| ||||| |||||||||||| | |||||
Sbjct: 325 ggaggctgcgctccacctccctggcggcgtcgtggcggtcctggatctcgttgagcgcgg 266
Query: 575 cgagcacggcgcccttgccgtgctccgcgacagcggcgcccaggagctcctcgccgcggt 634
||||||||||||||||||||||||| ||||| ||||||| || || |||||||||||||
Sbjct: 265 cgagcacggcgcccttgccgtgctcggcgacggcggcgctcatgatctcctcgccgcggc 206
Query: 635 cgtcggagatgatgcgctcgat 656
| ||||||||||||||||||||
Sbjct: 205 cctcggagatgatgcgctcgat 184
>gb|CA497363.1|CA497363 WHE3226_E10_I20ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3226_E10_I20, mRNA sequence
Length = 456
Score = 268 bits (135), Expect = 4e-070
Identities = 320/382 (83%)
Strand = Plus / Minus
Query: 275 acctcctgaggctggtggcgattggcacgatgacaagcaggacgaggagcagcaggatta 334
|||||||||||||||||||||| || |||||||| | |||| |||||||||||| | |
Sbjct: 444 acctcctgaggctggtggcgatggggacgatgacgatgaggatgaggagcagcagcagga 385
Query: 335 tgatgccgatgcagagacacttgcggctgcttctctggtactccttggccttgcccagct 394
|||||||||||||||| ||||||||||||| | ||||| ||| ||||||||| ||||
Sbjct: 384 tgatgccgatgcagaggcacttgcggctgccgcgctggtgctcgcgggccttgccgagct 325
Query: 395 ccttgttgccgccctgcacgtagtgggaggcgttggcgacgtggctctcgatgtcgtcga 454
||||||||||| || ||||||| ||||||| |||||| |||||||| | |
Sbjct: 324 ccttgttgccggagtggacgtagtccctggcgttgctcacgtggtgctcgatgttctgaa 265
Query: 455 gcttctccccctgcgtctccaccatgacggccatgtcgaggaacacttggtggagctcca 514
|||| |||||||||| || || | |||||||||||| |||||||| ||||||||||| |
Sbjct: 264 gcttgtccccctgcgactgtacgacgacggccatgtcaaggaacacctggtggagctcga 205
Query: 515 ggaggctgcgttccacctcgcgcgccgcgtcacggcggncctggatctcgtgcaccgcgg 574
|||||||||| |||||||| | || ||||| ||||| |||||||||||| | |||||
Sbjct: 204 ggaggctgcgctccacctccctggcggcgtcgtggcggtcctggatctcgttgagcgcgg 145
Query: 575 cgagcacggcgcccttgccgtgctccgcgacagcggcgcccaggagctcctcgccgcggt 634
||||||||||||||||||||||||| ||||| ||||||| || || |||||||||||||
Sbjct: 144 cgagcacggcgcccttgccgtgctcggcgacggcggcgctcatgatctcctcgccgcggc 85
Query: 635 cgtcggagatgatgcgctcgat 656
| ||||||||||||||||||||
Sbjct: 84 cctcggagatgatgcgctcgat 63
>gb|AL818809.1|AL818809 AL818809 l:125 Triticum aestivum cDNA clone C11_l125_plate_3, mRNA
sequence
Length = 630
Score = 230 bits (116), Expect = 1e-058
Identities = 286/344 (83%)
Strand = Plus / Minus
Query: 313 aggacgaggagcagcaggattatgatgccgatgcagagacacttgcggctgcttctctgg 372
|||| |||||||||||| | |||| |||||||||||| ||||||||||||| | ||||
Sbjct: 613 aggatgaggagcagcagcaggatgangccgatgcagaggcacttgcggctgccgcgctgg 554
Query: 373 tactccttggccttgcccagctccttgttgccgccctgcacgtagtgggaggcgttggcg 432
| ||| ||||||||| ||||||||||||||| || ||||||| |||||||
Sbjct: 553 tgctcgcgggccttgccgagctccttgttgccggagtggacgtagtcccnggcgttgctc 494
Query: 433 acgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgtcg 492
|||||| |||||||| | ||||| |||||||||| || || | ||||||||||||
Sbjct: 493 acgtggtgctcgatgttctgaagcttgtccccctgcgactgtacgacgacggccatgtca 434
Query: 493 aggaacacttggtggagctccaggaggctgcgttccacctcgcgcgccgcgtcacggcgg 552
|||||||| ||||||||||| ||||||||||| |||||||| | || ||||| |||||
Sbjct: 433 aggaacacctggtggagctcgaggaggctgcgctccacctcccnggcggcgtcgtggcgg 374
Query: 553 ncctggatctcgtgcaccgcggcgagcacggcgcccttgccgtgctccgcgacagcggcg 612
|||||||||||| | |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 373 tcctggatctcgttgagcgcggcgagcacggcgcccttgccgtgctcggcgacggcggcg 314
Query: 613 cccaggagctcctcgccgcggtcgtcggagatgatgcgctcgat 656
| || || ||||||||||||| | ||||||||||||||||||||
Sbjct: 313 ctcatgatctcctcgccgcggccctcggagatgatgcgctcgat 270
>gb|BJ207573.1|BJ207573 BJ207573 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4g09 5', mRNA sequence
Length = 578
Score = 210 bits (106), Expect = 9e-053
Identities = 270/325 (83%)
Strand = Plus / Minus
Query: 275 acctcctgaggctggtggcgattggcacgatgacaagcaggacgaggagcagcaggatta 334
||||| |||||||||||||||| || || ||||| | |||| |||||||||||| | |
Sbjct: 534 acctcttgaggctggtggcgatggggacaatgacgatgaggatgaggagcagcagcagga 475
Query: 335 tgatgccgatgcagagacacttgcggctgcttctctggtactccttggccttgcccagct 394
|||||||||||||||| ||||||||||||| | ||||| ||| ||||||||| ||||
Sbjct: 474 tgatgccgatgcagaggcacttgcggctgccgcgctggtgctcgcgggccttgccgagct 415
Query: 395 ccttgttgccgccctgcacgtagtgggaggcgttggcgacgtggctctcgatgtcgtcga 454
||||||||||| || ||||||| ||||||| |||||| | ||||||||| ||
Sbjct: 414 ccttgttgccggagtggacgtagtccctggcgttgctcacgtggtgcgcgatgtcgttga 355
Query: 455 gcttctccccctgcgtctccaccatgacggccatgtcgaggaacacttggtggagctcca 514
|||||||||||||| |||||| | |||||||||||||| ||||| ||||||||||| |
Sbjct: 354 tcttctccccctgcgactccacgacgacggccatgtcgacaaacacctggtggagctcga 295
Query: 515 ggaggctgcgttccacctcgcgcgccgcgtcacggcggncctggatctcgtgcaccgcgg 574
|||||||||| |||||||| | || ||||| ||||| |||||||||||| | |||||
Sbjct: 294 ggaggctgcgctccacctccctggcggcgtcgtggcggtcctggatctcgttgagcgcgg 235
Query: 575 cgagcacggcgcccttgccgtgctc 599
|||||||||| ||||||||||||||
Sbjct: 234 cgagcacggcccccttgccgtgctc 210
>gb|BJ214853.1|BJ214853 BJ214853 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4g09 3', mRNA sequence
Length = 628
Score = 210 bits (106), Expect = 9e-053
Identities = 270/325 (83%)
Strand = Plus / Plus
Query: 275 acctcctgaggctggtggcgattggcacgatgacaagcaggacgaggagcagcaggatta 334
||||| |||||||||||||||| || || ||||| | |||| |||||||||||| | |
Sbjct: 198 acctcttgaggctggtggcgatggggacaatgacgatgaggatgaggagcagcagcagga 257
Query: 335 tgatgccgatgcagagacacttgcggctgcttctctggtactccttggccttgcccagct 394
|||||||||||||||| ||||||||||||| | ||||| ||| ||||||||| ||||
Sbjct: 258 tgatgccgatgcagaggcacttgcggctgccgcgctggtgctcgcgggccttgccgagct 317
Query: 395 ccttgttgccgccctgcacgtagtgggaggcgttggcgacgtggctctcgatgtcgtcga 454
||||||||||| || ||||||| ||||||| |||||| | ||||||||| ||
Sbjct: 318 ccttgttgccggagtggacgtagtccctggcgttgctcacgtggtgcgcgatgtcgttga 377
Query: 455 gcttctccccctgcgtctccaccatgacggccatgtcgaggaacacttggtggagctcca 514
|||||||||||||| |||||| | |||||||||||||| ||||| ||||||||||| |
Sbjct: 378 tcttctccccctgcgactccacgacgacggccatgtcgacaaacacctggtggagctcga 437
Query: 515 ggaggctgcgttccacctcgcgcgccgcgtcacggcggncctggatctcgtgcaccgcgg 574
|||||||||| |||||||| | || ||||| ||||| |||||||||||| | |||||
Sbjct: 438 ggaggctgcgctccacctccctggcggcgtcgtggcggtcctggatctcgttgagcgcgg 497
Query: 575 cgagcacggcgcccttgccgtgctc 599
|||||||||| ||||||||||||||
Sbjct: 498 cgagcacggcccccttgccgtgctc 522
>gb|CA616162.1|CA616162 wr1.pk181.g7 wr1 Triticum aestivum cDNA clone wr1.pk181.g7 5' end,
mRNA sequence
Length = 382
Score = 109 bits (55), Expect = 2e-022
Identities = 112/131 (85%)
Strand = Plus / Minus
Query: 275 acctcctgaggctggtggcgattggcacgatgacaagcaggacgaggagcagcaggatta 334
||||||||||||| |||||||| || |||||||| | |||| |||||||||||| | |
Sbjct: 148 acctcctgaggcttgtggcgatggggacgatgacgatgaggatgaggagcagcagcagga 89
Query: 335 tgatgccgatgcagagacacttgcggctgcttctctggtactccttggccttgcccagct 394
|||||||||||||||| ||||||||||||| | ||||| ||| ||||||||| ||||
Sbjct: 88 tgatgccgatgcagaggcacttgcggctgccgcgctggtgctcgcgggccttgccgagct 29
Query: 395 ccttgttgccg 405
|||||||||||
Sbjct: 28 ccttgttgccg 18
>gb|BQ839266.1|BQ839266 WHE4164_B10_C20ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4164_B10_C20, mRNA sequence
Length = 694
Score = 77.8 bits (39), Expect = 9e-013
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| || | ||||||||||| | |||||| |||||||||||
Sbjct: 651 cgacgtggccctcgatgtcgtccagttgctccccctgcgccgccaccaggacggccatgt 592
Query: 491 cgaggaacacttggtggagctccaggaggct 521
|| |||||| || || |||||||| |||||
Sbjct: 591 cgttgaacacctgctgcagctccagcaggct 561
>gb|CD873580.1|CD873580 AZO3.100D08R011123 AZO3 Triticum aestivum cDNA clone AZO3100D08,
mRNA sequence
Length = 523
Score = 77.8 bits (39), Expect = 9e-013
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| || | ||||||||||| | |||||| |||||||||||
Sbjct: 337 cgacgtggccctcgatgtcgtccagttgctccccctgcgccgccaccaggacggccatgt 396
Query: 491 cgaggaacacttggtggagctccaggaggct 521
|| |||||| || || |||||||| |||||
Sbjct: 397 cgttgaacacctgctgcagctccagcaggct 427
>gb|CV761935.1|CV761935 FGAS056324 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 844
Score = 77.8 bits (39), Expect = 9e-013
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| || | ||||||||||| | |||||| |||||||||||
Sbjct: 389 cgacgtggccctcgatgtcgtccagttgctccccctgcgccgccaccaggacggccatgt 448
Query: 491 cgaggaacacttggtggagctccaggaggct 521
|| |||||| || || |||||||| |||||
Sbjct: 449 cgttgaacacctgctgcagctccagcaggct 479
>gb|BQ752895.1|BQ752895 WHE4120_D07_H14ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4120_D07_H14, mRNA sequence
Length = 524
Score = 73.8 bits (37), Expect = 1e-011
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| |||| ||||||||||| | |||||| ||||||||||
Sbjct: 163 cgacgtggccctcgatgtcgtccagctgctccccctgcgccgccaccagcacggccatgt 104
Query: 491 cgaggaacacttggtggagctccag 515
|| |||||| || || ||||||||
Sbjct: 103 cgttgaacacctgctgcagctccag 79
>gb|CA641441.1|CA641441 wre1n.pk0045.h7 wre1n Triticum aestivum cDNA clone wre1n.pk0045.h7
5' end, mRNA sequence
Length = 502
Score = 73.8 bits (37), Expect = 1e-011
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| |||| ||||||||||| | |||||| ||||||||||
Sbjct: 142 cgacgtggccctcgatgtcgtccagctgctccccctgcgccgccaccagcacggccatgt 83
Query: 491 cgaggaacacttggtggagctccag 515
|| |||||| || || ||||||||
Sbjct: 82 cgttgaacacctgctgcagctccag 58
>gb|CA663251.1|CA663251 wlmk1.pk0027.g1 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0027.g1
5' end, mRNA sequence
Length = 392
Score = 73.8 bits (37), Expect = 1e-011
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| |||| ||||||||||| | |||||| ||||||||||
Sbjct: 149 cgacgtggccctcgatgtcgtccagctgctccccctgcgccgccaccagcacggccatgt 90
Query: 491 cgaggaacacttggtggagctccag 515
|| |||||| || || ||||||||
Sbjct: 89 cgttgaacacctgctgcagctccag 65
>gb|CD490382.1|CD490382 WHE2497_H06_P11ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2497_H06_P11, mRNA sequence
Length = 697
Score = 73.8 bits (37), Expect = 1e-011
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| |||| ||||||||||| | |||||| ||||||||||
Sbjct: 380 cgacgtggccctcgatgtcgtccagctgctccccctgcgccgccaccagcacggccatgt 439
Query: 491 cgaggaacacttggtggagctccag 515
|| |||||| || || ||||||||
Sbjct: 440 cgttgaacacctgctgcagctccag 464
>gb|CD881937.1|CD881937 F1.104M15F010329 F1 Triticum aestivum cDNA clone F1104M15, mRNA
sequence
Length = 705
Score = 73.8 bits (37), Expect = 1e-011
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| |||| ||||||||||| | |||||| ||||||||||
Sbjct: 358 cgacgtggccctcgatgtcgtccagctgctccccctgcgccgccaccagcacggccatgt 299
Query: 491 cgaggaacacttggtggagctccag 515
|| |||||| || || ||||||||
Sbjct: 298 cgttgaacacctgctgcagctccag 274
>gb|CD935387.1|CD935387 OV.101G16F010201 OV Triticum aestivum cDNA clone OV101G16, mRNA
sequence
Length = 593
Score = 73.8 bits (37), Expect = 1e-011
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| |||| ||||||||||| | |||||| ||||||||||
Sbjct: 287 cgacgtggccctcgatgtcgtccagctgctccccctgcgccgccaccagcacggccatgt 228
Query: 491 cgaggaacacttggtggagctccag 515
|| |||||| || || ||||||||
Sbjct: 227 cgttgaacacctgctgcagctccag 203
>gb|CD935482.1|CD935482 OV.101K08R010424 OV Triticum aestivum cDNA clone OV101K08, mRNA
sequence
Length = 670
Score = 73.8 bits (37), Expect = 1e-011
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| |||| ||||||||||| | |||||| ||||||||||
Sbjct: 444 cgacgtggccctcgatgtcgtccagctgctccccctgcgccgccaccagcacggccatgt 503
Query: 491 cgaggaacacttggtggagctccag 515
|| |||||| || || ||||||||
Sbjct: 504 cgttgaacacctgctgcagctccag 528
>gb|CD935483.1|CD935483 OV.101K08R010430 OV Triticum aestivum cDNA clone OV101K08, mRNA
sequence
Length = 667
Score = 73.8 bits (37), Expect = 1e-011
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| |||| ||||||||||| | |||||| ||||||||||
Sbjct: 444 cgacgtggccctcgatgtcgtccagctgctccccctgcgccgccaccagcacggccatgt 503
Query: 491 cgaggaacacttggtggagctccag 515
|| |||||| || || ||||||||
Sbjct: 504 cgttgaacacctgctgcagctccag 528
>gb|CK198271.1|CK198271 FGAS006755 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 886
Score = 73.8 bits (37), Expect = 1e-011
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| |||| ||||||||||| | |||||| ||||||||||
Sbjct: 517 cgacgtggccctcgatgtcgtccagctgctccccctgcgccgccaccagcacggccatgt 576
Query: 491 cgaggaacacttggtggagctccag 515
|| |||||| || || ||||||||
Sbjct: 577 cgttgaacacctgctgcagctccag 601
>gb|BG608184.1|BG608184 WHE2497_H06_P11ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2497_H06_P11,
mRNA sequence
Length = 485
Score = 71.9 bits (36), Expect = 5e-011
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 432 gacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgtc 491
|||||||| |||||||||||| |||| ||||||||||| | |||||| |||||||||||
Sbjct: 432 gacgtggccctcgatgtcgtccagctgctccccctgcgccgccaccagcacggccatgtc 373
Query: 492 gaggaacacttggtggagctccag 515
| |||||| || || ||||||||
Sbjct: 372 gttgaacacctgctgcagctccag 349
>gb|CD873579.1|CD873579 AZO3.100D08F010925 AZO3 Triticum aestivum cDNA clone AZO3100D08,
mRNA sequence
Length = 714
Score = 69.9 bits (35), Expect = 2e-010
Identities = 77/91 (84%)
Strand = Plus / Minus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| || | |||||||||| | |||||| |||||||||||
Sbjct: 648 cgacgtggccctcgatgtcgtccagttgctccccctgccccgccaccaggacggccatgt 589
Query: 491 cgaggaacacttggtggagctccaggaggct 521
|| |||||| || || |||||||| |||||
Sbjct: 588 cgttgaacacctgctgcagctccagcaggct 558
>gb|CF132870.1|CF132870 WHE4351_C07_E13ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4351_C07_E13, mRNA sequence
Length = 775
Score = 56.0 bits (28), Expect = 3e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 621 ctcctcgccgcggtcgtcggagatgatgcgctcgat 656
||||||||||||| | ||||||||||||||||||||
Sbjct: 775 ctcctcgccgcggccctcggagatgatgcgctcgat 740
>gb|CD881938.1|CD881938 F1.104M15R010628 F1 Triticum aestivum cDNA clone F1104M15, mRNA
sequence
Length = 474
Score = 44.1 bits (22), Expect = 0.012
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 431 cgacgtggctctcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgt 490
||||||||| |||||||||||| || | |||||||| | | |||||| ||||||||||
Sbjct: 404 cgacgtggccctcgatgtcgtccagttgttccccctgtgccgccaccagcacggccatgt 463
Query: 491 cg 492
||
Sbjct: 464 cg 465
>gb|CA727551.1|CA727551 wdi1c.pk001.h22 wdi1c Triticum aestivum cDNA clone wdi1c.pk001.h22
5' end, mRNA sequence
Length = 593
Score = 42.1 bits (21), Expect = 0.047
Identities = 65/80 (81%)
Strand = Plus / Minus
Query: 442 tcgatgtcgtcgagcttctccccctgcgtctccaccatgacggccatgtcgaggaacact 501
||||||| ||| || | |||||| |||| | |||||| |||||||||||| ||||||
Sbjct: 267 tcgatgtggtccagntgctccccttgcgccgccaccagcacggccatgtcgttgaacacc 208
Query: 502 tggtggagctccaggaggct 521
|| || |||||||| |||||
Sbjct: 207 tgttgcagctccagcaggct 188
>gb|DR733604.1|DR733604 FGAS079362 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 860
Score = 42.1 bits (21), Expect = 0.047
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 310 agcaggacgaggagcagcagg 330
|||||||||||||||||||||
Sbjct: 403 agcaggacgaggagcagcagg 383
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 179,505
Number of Sequences: 636343
Number of extensions: 179505
Number of successful extensions: 55860
Number of sequences better than 0.5: 26
Number of HSP's better than 0.5 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55805
Number of HSP's gapped (non-prelim): 47
length of query: 656
length of database: 367,240,239
effective HSP length: 19
effective length of query: 637
effective length of database: 355,149,722
effective search space: 226230372914
effective search space used: 226230372914
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)