BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2655972.2.1
         (666 letters)

Database: Triticum_nucl_with_EST.fasta 
           636,343 sequences; 367,240,239 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CD898601.1|CD898601  G174.109I13F010824 G174 Triticum aes...   129   3e-028
gb|CK214143.1|CK214143  FGAS026066 Triticum aestivum FGAS: L...    82   6e-014
gb|CA633415.1|CA633415  wle1n.pk0070.f4 wle1n Triticum aesti...    72   5e-011
gb|BQ608303.1|BQ608303  BRY_4207 wheat EST endosperm library...    40   0.19 

>gb|CD898601.1|CD898601 G174.109I13F010824 G174 Triticum aestivum cDNA clone G174109I13,
           mRNA sequence
          Length = 568

 Score =  129 bits (65), Expect = 3e-028
 Identities = 206/253 (81%)
 Strand = Plus / Plus

                                                                       
Query: 66  aagaaaacgattttctatacaaggatttctggctaactcatgcgcaggatgagggggtgt 125
           |||| ||||||||||| |||||||| |||||| | |  ||||| |||||  |||| ||| 
Sbjct: 19  aagacaacgattttctgtacaaggacttctggttgaagcatgcccaggacaagggagtgc 78

                                                                       
Query: 126 tgtcctcgaaaaggggcggtggtttcttcgtcgctttttcccgggatcagccgcaaaagg 185
           |||||  ||||  ||||||||||||||| || || |||||| |||||||||| |||||||
Sbjct: 79  tgtccctgaaagagggcggtggtttctttgttgccttttccagggatcagcctcaaaagg 138

                                                                       
Query: 186 tctacgtgcaacccaagataaaggaacagagttcaagactgtggaacttattactgtccg 245
           |||| || ||||  ||||||||||| |||||| ||||| |||||||| |||||   || |
Sbjct: 139 tctatgtacaacataagataaaggagcagagtgcaagagtgtggaacatattatgctctg 198

                                                                       
Query: 246 atgcagtgatctacattgcaggctcttcgacgaaaatgcctgccgatgttacagctgcgc 305
             || |  || ||| ||||||| ||||| || ||||||||||| |||||||||||||| |
Sbjct: 199 gggctgcaatatacgttgcagggtcttctaccaaaatgcctgctgatgttacagctgcac 258

                        
Query: 306 tagaggaggttat 318
           |||| || |||||
Sbjct: 259 tagaagaagttat 271



>gb|CK214143.1|CK214143 FGAS026066 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
           aestivum cDNA, mRNA sequence
          Length = 1039

 Score = 81.8 bits (41), Expect = 6e-014
 Identities = 127/153 (83%), Gaps = 2/153 (1%)
 Strand = Plus / Minus

                                                                       
Query: 38  gttctgttcttttttggctgtagaaaccaagaaaacgattttctatacaaggatttctgg 97
           ||||| ||||| |||||||||||||| ||||| || |||||||| |||||||| ||||||
Sbjct: 595 gttctattcttctttggctgtagaaatcaagataatgattttctgtacaaggacttctgg 536

                                                                       
Query: 98  ctaactcatgcgcaggatgagggggtg-ttgtcctcgaaaaggggcggtggtttcttcgt 156
            ||| |||||| |||||  |||||||| ||  ||| ||||| ||| |||||||| || ||
Sbjct: 535 ttaaatcatgcccaggaccagggggtgctttccctagaaaa-gggtggtggtttatttgt 477

                                            
Query: 157 cgctttttcccgggatcagccgcaaaaggtcta 189
            || |||||  ||||||| || |||||||||||
Sbjct: 476 tgcgttttctagggatcaacctcaaaaggtcta 444



>gb|CA633415.1|CA633415 wle1n.pk0070.f4 wle1n Triticum aestivum cDNA clone wle1n.pk0070.f4
           5' end, mRNA sequence
          Length = 530

 Score = 71.9 bits (36), Expect = 5e-011
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                       
Query: 38  gttctgttcttttttggctgtagaaaccaagaaaacgattttctatacaaggatttctgg 97
           ||||| ||||| |||||||||||||| ||||| || ||| |||| |||||||| ||||||
Sbjct: 297 gttctattcttctttggctgtagaaatcaagataatgatnttctgtacaaggacttctgg 238

                                      
Query: 98  ctaactcatgcgcaggatgagggggtg 124
            ||| |||||| |||||  ||||||||
Sbjct: 237 ttaaatcatgcccaggaccagggggtg 211



>gb|BQ608303.1|BQ608303 BRY_4207 wheat EST endosperm library Triticum aestivum cDNA 5',
           mRNA sequence
          Length = 590

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 555 tctaaactttcctcatttag 574
           ||||||||||||||||||||
Sbjct: 358 tctaaactttcctcatttag 377



  Database: Triticum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  3:01 PM
  Number of letters in database: 367,240,239
  Number of sequences in database:  636,343
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 94,511
Number of Sequences: 636343
Number of extensions: 94511
Number of successful extensions: 23442
Number of sequences better than  0.5: 4
Number of HSP's better than  0.5 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23433
Number of HSP's gapped (non-prelim): 8
length of query: 666
length of database: 367,240,239
effective HSP length: 19
effective length of query: 647
effective length of database: 355,149,722
effective search space: 229781870134
effective search space used: 229781870134
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)