BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2647051.2.1
(627 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD880578.1|CD880578 F1.075C20F010126 F1 Triticum aestivu... 186 1e-045
gb|CD890743.1|CD890743 G118.115F12R010926 G118 Triticum aes... 184 5e-045
gb|CD893740.1|CD893740 G118.124G21F010828 G118 Triticum aes... 184 5e-045
gb|CK213346.1|CK213346 FGAS025255 Triticum aestivum FGAS: L... 184 5e-045
dbj|AB187026.1| Triticum aestivum CHI gene for chalcone iso... 184 5e-045
gb|CA635237.1|CA635237 wle1n.pk0097.g1 wle1n Triticum aesti... 180 8e-044
gb|CK209576.1|CK209576 FGAS021347 Triticum aestivum FGAS: L... 180 8e-044
gb|CK214337.1|CK214337 FGAS026260 Triticum aestivum FGAS: L... 149 3e-034
gb|CV766266.1|CV766266 FGAS060653 Triticum aestivum FGAS: L... 135 4e-030
gb|CV780135.1|CV780135 FGAS074544 Triticum aestivum FGAS: L... 127 1e-027
gb|AL827097.1|AL827097 AL827097 p:638 Triticum aestivum cDN... 117 1e-024
gb|AJ610471.1|AJ610471 AJ610471 Triticum turgidum subsp. du... 115 4e-024
gb|CV774253.1|CV774253 FGAS068651 Triticum aestivum FGAS: L... 115 4e-024
gb|CA625395.1|CA625395 wl1n.pk0139.g8 wl1n Triticum aestivu... 101 6e-020
gb|CD890742.1|CD890742 G118.115F12F010719 G118 Triticum aes... 98 9e-019
gb|CK214541.1|CK214541 FGAS026469 Triticum aestivum FGAS: L... 76 3e-012
gb|CV779521.1|CV779521 FGAS073930 Triticum aestivum FGAS: L... 58 8e-007
gb|CV761140.1|CV761140 FGAS055528 Triticum aestivum FGAS: L... 50 2e-004
gb|CA645757.1|CA645757 wre1n.pk0096.g7 wre1n Triticum aesti... 42 0.045
gb|CK161300.1|CK161300 FGAS013866 Triticum aestivum FGAS: L... 42 0.045
gb|BJ278124.1|BJ278124 BJ278124 Y. Ogihara unpublished cDNA... 40 0.18
gb|BJ283179.1|BJ283179 BJ283179 Y. Ogihara unpublished cDNA... 40 0.18
gb|BQ169546.1|BQ169546 WHE0953_D10_H19ZT Wheat pre-anthesis... 40 0.18
gb|BQ744428.1|BQ744428 WHE4115_E02_J03ZS Wheat salt-stresse... 40 0.18
gb|CA725132.1|CA725132 wds3f.pk003.d6 wds3f Triticum aestiv... 40 0.18
>gb|CD880578.1|CD880578 F1.075C20F010126 F1 Triticum aestivum cDNA clone F1075C20, mRNA
sequence
Length = 719
Score = 186 bits (94), Expect = 1e-045
Identities = 162/185 (87%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || ||||| |||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 468 ttcgcccccggcgcgtccatcctcttcacccactcccccgccggcctcctcaccgtcgcc 527
Query: 110 ttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcctc 169
||||||||||||||||| ||||||| | ||||||||||||| ||||| ||| || |||
Sbjct: 528 ttctccaaggactcgtccgtgccggagtccggcggcgtggccatcgacaacgcccggctc 587
Query: 170 tgcgaggccgtgctggagtccatcatcggggagcgcggcgtgtcgccggccgcgaagctg 229
||||||||||||||||||||||||||||| |||| ||| ||||||||||| || |||||
Sbjct: 588 tgcgaggccgtgctggagtccatcatcggcgagcacggngtgtcgccggcggccaagctc 647
Query: 230 agcct 234
|||||
Sbjct: 648 agcct 652
>gb|CD890743.1|CD890743 G118.115F12R010926 G118 Triticum aestivum cDNA clone G118115F12,
mRNA sequence
Length = 620
Score = 184 bits (93), Expect = 5e-045
Identities = 162/185 (87%)
Strand = Plus / Minus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || ||||| |||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 466 ttcgcccccggcgcgtccatcctcttcacccactcccccgccggcctcctcaccgtcgcc 407
Query: 110 ttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcctc 169
||||||||||||||||| ||||||| | ||||||||||||| ||||| ||| || |||
Sbjct: 406 ttctccaaggactcgtccgtgccggagtccggcggcgtggccatcgacaacgcccggctc 347
Query: 170 tgcgaggccgtgctggagtccatcatcggggagcgcggcgtgtcgccggccgcgaagctg 229
||||||||||||||||||||||||||||| |||| ||| ||||||||||| || |||||
Sbjct: 346 tgcgaggccgtgctggagtccatcatcggcgagcacggggtgtcgccggcggccaagctc 287
Query: 230 agcct 234
|||||
Sbjct: 286 agcct 282
>gb|CD893740.1|CD893740 G118.124G21F010828 G118 Triticum aestivum cDNA clone G118124G21,
mRNA sequence
Length = 737
Score = 184 bits (93), Expect = 5e-045
Identities = 162/185 (87%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || ||||||||||| |||||||| ||||| ||||||| |||||||||||||||
Sbjct: 424 ttcgcccccggcgcctccatactcttcacccactcccccgccggcgtcctcaccgtcgcc 483
Query: 110 ttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcctc 169
||||||||||||||||| ||||||| | ||||||||||||| ||||| ||| || |||
Sbjct: 484 ttctccaaggactcgtccgtgccggagtccggcggcgtggccatcgacaacgcccggctc 543
Query: 170 tgcgaggccgtgctggagtccatcatcggggagcgcggcgtgtcgccggccgcgaagctg 229
||||||||||||||||||||||||||||| |||| ||| |||||||| || || |||||
Sbjct: 544 tgcgaggccgtgctggagtccatcatcggagagcacggggtgtcgcctgcggccaagctc 603
Query: 230 agcct 234
|||||
Sbjct: 604 agcct 608
>gb|CK213346.1|CK213346 FGAS025255 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1058
Score = 184 bits (93), Expect = 5e-045
Identities = 162/185 (87%)
Strand = Plus / Minus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || ||||| |||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 501 ttcgcccccggcgcgtccatcctcttcacccactcccccgccggcctcctcaccgtcgcc 442
Query: 110 ttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcctc 169
||||||||||||||||| ||||||| | ||||||||||||| ||||| ||| || |||
Sbjct: 441 ttctccaaggactcgtccgtgccggagtccggcggcgtggccatcgacaacgcccggctc 382
Query: 170 tgcgaggccgtgctggagtccatcatcggggagcgcggcgtgtcgccggccgcgaagctg 229
||||||||||||||||||||||||||||| |||| ||| ||||||||||| || |||||
Sbjct: 381 tgcgaggccgtgctggagtccatcatcggcgagcacggggtgtcgccggcggccaagctc 322
Query: 230 agcct 234
|||||
Sbjct: 321 agcct 317
>dbj|AB187026.1| Triticum aestivum CHI gene for chalcone isomerase, partial cds
Length = 394
Score = 184 bits (93), Expect = 5e-045
Identities = 162/185 (87%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || ||||||||||| |||||||| ||||| ||||||| |||||||||||||||
Sbjct: 119 ttcgcccccggcgcctccatactcttcacccactcccccgccggcgtcctcaccgtcgcc 178
Query: 110 ttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcctc 169
||||||||||||||||| ||||||| | ||||||||||||| ||||| ||| || |||
Sbjct: 179 ttctccaaggactcgtccgtgccggagtccggcggcgtggccatcgacaacgcccggctc 238
Query: 170 tgcgaggccgtgctggagtccatcatcggggagcgcggcgtgtcgccggccgcgaagctg 229
||||||||||||||||||||||||||||| |||| ||| |||||||| || || |||||
Sbjct: 239 tgcgaggccgtgctggagtccatcatcggcgagcacggggtgtcgcctgcggccaagctc 298
Query: 230 agcct 234
|||||
Sbjct: 299 agcct 303
>gb|CA635237.1|CA635237 wle1n.pk0097.g1 wle1n Triticum aestivum cDNA clone wle1n.pk0097.g1
5' end, mRNA sequence
Length = 560
Score = 180 bits (91), Expect = 8e-044
Identities = 157/179 (87%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || ||||| |||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 91 ttcgcccccggcgcgtccatcctcttcacccactcccccgccggcctcctcaccgtcgcc 150
Query: 110 ttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcctc 169
||||||||||||||||| ||||||| | ||||||||||||| ||||| ||| || |||
Sbjct: 151 ttctccaaggactcgtccgtgccggagtccggcggcgtggccatcgacaacgcccggctc 210
Query: 170 tgcgaggccgtgctggagtccatcatcggggagcgcggcgtgtcgccggccgcgaagct 228
||||||||||||||||||||||||||||| |||| ||| ||||||||||| || |||||
Sbjct: 211 tgcgaggccgtgctggagtccatcatcggcgagcacggggtgtcgccggcggccaagct 269
>gb|CK209576.1|CK209576 FGAS021347 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1051
Score = 180 bits (91), Expect = 8e-044
Identities = 148/167 (88%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || ||||||||||| |||||||| ||||| ||||||| |||||||||||||||
Sbjct: 531 ttcgcccccggcgcctccatactcttcacccactcccccgccggcgtcctcaccgtcgcc 590
Query: 110 ttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcctc 169
||||||||||||||||| ||||||| | ||||||||||||| ||||| ||| || |||
Sbjct: 591 ttctccaaggactcgtccgtgccggagtccggcggcgtggccatcgacaacgcccggctc 650
Query: 170 tgcgaggccgtgctggagtccatcatcggggagcgcggcgtgtcgcc 216
||||||||||||||||||||||||||||| |||| ||| ||||||||
Sbjct: 651 tgcgaggccgtgctggagtccatcatcggcgagcacggggtgtcgcc 697
>gb|CK214337.1|CK214337 FGAS026260 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1078
Score = 149 bits (75), Expect = 3e-034
Identities = 135/155 (87%)
Strand = Plus / Plus
Query: 49 tttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgc 108
|||||| || || |||||||| |||||||| ||||| ||||||| ||||||||||||||
Sbjct: 619 tttcgcccccggtgcctccatactcttcacccactcccccgccggtgtcctcaccgtcgc 678
Query: 109 cttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcct 168
|||||||||||||||||| ||||||| | ||||||||||| ||||| ||| || ||
Sbjct: 679 cttctccaaggactcgtccgtgccggagatcggcggcgtggacatcgacaacgcccggct 738
Query: 169 ctgcgaggccgtgctggagtccatcatcggggagc 203
|||||||||||||||||||||||||||||| ||||
Sbjct: 739 ctgcgaggccgtgctggagtccatcatcggcgagc 773
>gb|CV766266.1|CV766266 FGAS060653 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 825
Score = 135 bits (68), Expect = 4e-030
Identities = 125/144 (86%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || |||||| ||| |||||||| ||||| ||||||| ||||||||||| |||
Sbjct: 598 ttcgcccccggcgccctcatactcttcacccactcacccgccggcgtcctcaccgtggcc 657
Query: 110 ttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcctc 169
||||||||||||||||| ||||||| | ||||||||||||| ||||||||| || |||
Sbjct: 658 ttctccaaggactcgtccgtgccggagtccggcggcgtggccatcgagaacgcccggctc 717
Query: 170 tgcgaggccgtgctggagtccatc 193
||||||| ||||||||||||||||
Sbjct: 718 tgcgagggcgtgctggagtccatc 741
>gb|CV780135.1|CV780135 FGAS074544 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 846
Score = 127 bits (64), Expect = 1e-027
Identities = 145/170 (85%), Gaps = 2/170 (1%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcc-tcaccgtcgc 108
||||| || ||||| |||||||||||||| ||||| ||||||| ||| |||| |||||
Sbjct: 517 ttcgcccccggcgcgtccatcctcttcacccactcccccgccggcctccctcac-gtcgc 575
Query: 109 cttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcct 168
|||||||| | ||||||| ||||||| | ||||||||||||| ||||| || || ||
Sbjct: 576 cttctccaggnactcgtccgtgccggagtccggcggcgtggccatcgancacgcccggct 635
Query: 169 ctgcgaggccgtgctggagtccatcatcggggagcgcggcgtgtcgccgg 218
|||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 636 ctgcgaggccgtgctggagtccatcatcggcgagcacggggtgtcgccgg 685
>gb|AL827097.1|AL827097 AL827097 p:638 Triticum aestivum cDNA clone D07_p638_plate_7, mRNA
sequence
Length = 558
Score = 117 bits (59), Expect = 1e-024
Identities = 95/107 (88%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || ||||| |||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 435 ttcgcccccggcgcgtccatcctcttcacccactcccccgccggcctcctcaccgtcgcc 494
Query: 110 ttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcga 156
||||||||||||||||| ||||||| | ||||||||||||| |||||
Sbjct: 495 ttctccaaggactcgtccgtgccggagtccggcggcgtggccatcga 541
>gb|AJ610471.1|AJ610471 AJ610471 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 02289R, mRNA
sequence
Length = 185
Score = 115 bits (58), Expect = 4e-024
Identities = 99/113 (87%)
Strand = Plus / Plus
Query: 102 ccgtcgccttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaaca 161
|||| ||||| |||||||||||||| ||||||| | ||||||||||||| || ||||||
Sbjct: 16 ccgtggccttgtccaaggactcgtccgtgccggagtccggcggcgtggccatngagaacg 75
Query: 162 agcgcctctgcgaggccgtgctggagtccatcatcggggagcgcggcgtgtcg 214
|| |||||||||||||||||||||||||||||||| |||| ||| ||||||
Sbjct: 76 cccggctctgcgaggccgtgctggagtccatcatcggcgagcacggggtgtcg 128
>gb|CV774253.1|CV774253 FGAS068651 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 864
Score = 115 bits (58), Expect = 4e-024
Identities = 146/170 (85%), Gaps = 4/170 (2%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || ||||| ||||||||||| || ||||| ||||||| ||||||| ||||||
Sbjct: 414 ttcgcccccggcgcgtccatcctctt-acccactcccccgccggcctcctcacggtcgcc 472
Query: 110 ttctccaaggactcgtcggtgccggcggccggcggcgtggcgatcgagaacaagcgcctc 169
||||| ||||||||||| ||||||| | ||||||||||||| ||||| ||| || |||
Sbjct: 473 ttctc-aaggactcgtccgtgccggagtccggcggcgtggccatcgacaacgcccggctc 531
Query: 170 tgcgaggccgtgctggagtccatcatcggggagcgcggcgtgtcgccggc 219
||||||||||||||||| ||||||||||| |||| ||| |||||||||||
Sbjct: 532 tgcgaggccgtgctgga-tccatcatcggcgagc-cggggtgtcgccggc 579
>gb|CA625395.1|CA625395 wl1n.pk0139.g8 wl1n Triticum aestivum cDNA clone wl1n.pk0139.g8 5'
end, mRNA sequence
Length = 540
Score = 101 bits (51), Expect = 6e-020
Identities = 84/94 (89%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 1 cgagggcgtcgccgtagaaaagttcagggaggtgttcaagccagagactttcgcgccggg 60
||||||||||||||| || || |||| ||| |||||||||||| ||||||||||||||||
Sbjct: 417 cgagggcgtcgccgtggagaa-ttcaaggaagtgttcaagccaaagactttcgcgccggg 475
Query: 61 cgcctccatcctcttcacgcactcgaccgccgga 94
||||||||||||| ||| ||| ||| ||||||||
Sbjct: 476 cgcctccatcctcctcangcaatcgcccgccgga 509
>gb|CD890742.1|CD890742 G118.115F12F010719 G118 Triticum aestivum cDNA clone G118115F12,
mRNA sequence
Length = 520
Score = 97.6 bits (49), Expect = 9e-019
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| || ||||| |||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 427 ttcgcccccggcgcgtccatcctcttcacccactcccccgccggcctcctcaccgtcgcc 486
Query: 110 ttctccaaggactcgtcggtgccgg 134
||||||||||||||||| |||||||
Sbjct: 487 ttctccaaggactcgtccgtgccgg 511
>gb|CK214541.1|CK214541 FGAS026469 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1129
Score = 75.8 bits (38), Expect = 3e-012
Identities = 104/126 (82%)
Strand = Plus / Minus
Query: 87 ccgccggagtcctcaccgtcgccttctccaaggactcgtcggtgccggcggccggcggcg 146
||||||| ||||| ||||| ||||| |||||||| | ||| ||||||| | ||||||| |
Sbjct: 506 ccgccggggtccttaccgttgccttttccaaggaattgtccgtgccggagtccggcgggg 447
Query: 147 tggcgatcgagaacaagcgcctctgcgaggccgtgctggagtccatcatcggggagcgcg 206
|||| || || ||| || || || |||||||||||||||||||| |||||||||| ||
Sbjct: 446 tggccattgacaacgcccggctttgggaggccgtgctggagtccattatcggggagcacg 387
Query: 207 gcgtgt 212
| ||||
Sbjct: 386 gggtgt 381
>gb|CV779521.1|CV779521 FGAS073930 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 821
Score = 58.0 bits (29), Expect = 8e-007
Identities = 67/76 (88%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 50 ttcgcgccgggcgcctccatcctcttcacgcactcgaccgccggagtcctcaccgtcgcc 109
||||| ||||||||||| || |||||||| ||||| |||| || |||||||| ||||||
Sbjct: 641 ttcgccccgggcgcctc-atactcttcac-cactcccccgcgggngtcctcac-gtcgcc 697
Query: 110 ttctccaaggactcgt 125
||||||||||||||||
Sbjct: 698 ttctccaaggactcgt 713
>gb|CV761140.1|CV761140 FGAS055528 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 850
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 167 ctctgcgaggccgtgctggagtccatcatcggg 199
|||||| ||||| ||||||||||||||||||||
Sbjct: 668 ctctgctaggccctgctggagtccatcatcggg 700
>gb|CA645757.1|CA645757 wre1n.pk0096.g7 wre1n Triticum aestivum cDNA clone wre1n.pk0096.g7
5' end, mRNA sequence
Length = 586
Score = 42.1 bits (21), Expect = 0.045
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 330 agcgggcgggcgggcgagcga 350
|||||||||||||||||||||
Sbjct: 206 agcgggcgggcgggcgagcga 186
>gb|CK161300.1|CK161300 FGAS013866 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1153
Score = 42.1 bits (21), Expect = 0.045
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 330 agcgggcgggcgggcgagcga 350
|||||||||||||||||||||
Sbjct: 309 agcgggcgggcgggcgagcga 289
>gb|BJ278124.1|BJ278124 BJ278124 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr14m14 5', mRNA sequence
Length = 619
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 96 tcctcaccgtcgccttctcc 115
||||||||||||||||||||
Sbjct: 318 tcctcaccgtcgccttctcc 299
>gb|BJ283179.1|BJ283179 BJ283179 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr14m14 3', mRNA sequence
Length = 489
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 96 tcctcaccgtcgccttctcc 115
||||||||||||||||||||
Sbjct: 318 tcctcaccgtcgccttctcc 337
>gb|BQ169546.1|BQ169546 WHE0953_D10_H19ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0953_D10_H19, mRNA sequence
Length = 517
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 96 tcctcaccgtcgccttctcc 115
||||||||||||||||||||
Sbjct: 360 tcctcaccgtcgccttctcc 379
>gb|BQ744428.1|BQ744428 WHE4115_E02_J03ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4115_E02_J03, mRNA sequence
Length = 704
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 96 tcctcaccgtcgccttctcc 115
||||||||||||||||||||
Sbjct: 475 tcctcaccgtcgccttctcc 456
>gb|CA725132.1|CA725132 wds3f.pk003.d6 wds3f Triticum aestivum cDNA clone wds3f.pk003.d6 5'
end, mRNA sequence
Length = 400
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 96 tcctcaccgtcgccttctcc 115
||||||||||||||||||||
Sbjct: 334 tcctcaccgtcgccttctcc 353
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 197,427
Number of Sequences: 636343
Number of extensions: 197427
Number of successful extensions: 59800
Number of sequences better than 0.5: 27
Number of HSP's better than 0.5 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59748
Number of HSP's gapped (non-prelim): 43
length of query: 627
length of database: 367,240,239
effective HSP length: 19
effective length of query: 608
effective length of database: 355,149,722
effective search space: 215931030976
effective search space used: 215931030976
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)