BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2646712.2.1
(581 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE400455.1|BE400455 AWB003.H04F000328 ITEC AWB Wheat Mei... 168 3e-040
gb|CA626399.1|CA626399 wl1n.pk0136.e9 wl1n Triticum aestivu... 167 1e-039
gb|CN008270.1|CN008270 WHE2639_C08_F15ZE Wheat Fusarium gra... 155 4e-036
gb|BQ161883.1|BQ161883 WHE0484_c09_e18zT Wheat Fusarium gra... 149 2e-034
gb|CA626403.1|CA626403 wl1n.pk0136.d7 wl1n Triticum aestivu... 137 9e-031
gb|AL831268.1|AL831268 AL831268 q:242 Triticum aestivum cDN... 133 1e-029
gb|CK206554.1|CK206554 FGAS018152 Triticum aestivum FGAS: L... 107 8e-022
gb|CK209046.1|CK209046 FGAS020782 Triticum aestivum FGAS: L... 107 8e-022
gb|AF307997.1|AF307997 Triticum aestivum cinnamoyl-CoA redu... 107 8e-022
gb|CA638309.1|CA638309 wre1n.pk0008.d2 wre1n Triticum aesti... 100 2e-019
gb|CV759318.1|CV759318 FGAS053701 Triticum aestivum FGAS: L... 100 2e-019
gb|BE403213.1|BE403213 WHE0426_G02_M04ZS Wheat etiolated se... 98 8e-019
gb|CD878098.1|CD878098 AZO4.101O08R011121 AZO4 Triticum aes... 94 1e-017
gb|CD929976.1|CD929976 GR45.109L15F010417 GR45 Triticum aes... 94 1e-017
gb|CD929977.1|CD929977 GR45.109L15R010612 GR45 Triticum aes... 94 1e-017
gb|DR739700.1|DR739700 FGAS084917 Triticum aestivum FGAS: L... 94 1e-017
gb|BQ168574.1|BQ168574 WHE2460_D05_G10ZT Triticum monococcu... 92 5e-017
gb|CA701379.1|CA701379 wkm2c.pk005.p10 wkm2c Triticum aesti... 92 5e-017
gb|BM135067.1|BM135067 WHE0459_E07_E07ZS Wheat Fusarium gra... 86 3e-015
gb|CD454939.1|CD454939 WHE2013_A04_A07ZT CS wheat drought s... 86 3e-015
gb|BJ320121.1|BJ320121 BJ320121 Y. Ogihara unpublished cDNA... 76 3e-012
gb|BE492747.1|BE492747 WHE0564_C06_C06ZE Triticum monococcu... 70 2e-010
gb|BM140515.1|BM140515 WHE0484_c09_e18zS Wheat Fusarium gra... 62 4e-008
gb|CA651188.1|CA651188 wre1n.pk180.e11 wre1n Triticum aesti... 62 4e-008
gb|CA701459.1|CA701459 wkm2c.pk006.e23 wkm2c Triticum aesti... 60 2e-007
gb|CA626223.1|CA626223 wl1n.pk0135.b7 wl1n Triticum aestivu... 50 2e-004
gb|CK162668.1|CK162668 FGAS015267 Triticum aestivum FGAS: L... 50 2e-004
gb|BG606906.1|BG606906 WHE2454_H04_P08ZS Triticum monococcu... 48 7e-004
gb|BG607491.1|BG607491 WHE2494_D10_H20ZS Triticum monococcu... 48 7e-004
gb|BJ314634.1|BJ314634 BJ314634 Y. Ogihara unpublished cDNA... 48 7e-004
gb|CA731337.1|CA731337 wip1c.pk006.p20 wip1c Triticum aesti... 48 7e-004
gb|CD878802.1|CD878802 AZO4.103K12R011122 AZO4 Triticum aes... 48 7e-004
gb|BM137612.1|BM137612 WHE0483-0486_E18_E18ZS Wheat Fusariu... 46 0.003
gb|DR739379.1|DR739379 FGAS084596 Triticum aestivum FGAS: L... 46 0.003
gb|CA688541.1|CA688541 wlm96.pk041.i8 wlm96 Triticum aestiv... 44 0.011
gb|BE415150.1|BE415150 MWL023.B03F991217 ITEC MWL Wheat Roo... 42 0.042
gb|BE428652.1|BE428652 MTD009.D05F990617 ITEC MTD Durum Whe... 42 0.042
gb|BG608297.1|BG608297 WHE2470_F07_L14ZS Triticum monococcu... 42 0.042
gb|BJ278739.1|BJ278739 BJ278739 Y. Ogihara unpublished cDNA... 42 0.042
gb|BJ283791.1|BJ283791 BJ283791 Y. Ogihara unpublished cDNA... 42 0.042
gb|BQ483834.1|BQ483834 WHE3513_B09_C17ZS Wheat unstressed r... 42 0.042
gb|BQ743760.1|BQ743760 WHE4107_H01_P01ZS Wheat salt-stresse... 42 0.042
gb|BQ752927.1|BQ752927 WHE4120_G07_N14ZS Wheat salt-stresse... 42 0.042
gb|BQ788904.1|BQ788904 WHE4155_B07_C13ZS Wheat CS whole pla... 42 0.042
gb|CK203475.1|CK203475 FGAS012005 Triticum aestivum FGAS: L... 42 0.042
gb|CK203828.1|CK203828 FGAS012361 Triticum aestivum FGAS: L... 42 0.042
gb|CK211662.1|CK211662 FGAS023514 Triticum aestivum FGAS: L... 42 0.042
gb|AY008295.1| Triticum aestivum cinnamoyl-CoA reductase mR... 42 0.042
gb|AY771357.1| Triticum aestivum cultivar H4564 cinnamoyl-C... 42 0.042
gb|BE424798.1|BE424798 WHE0090_G10_N20ZS Wheat endosperm cD... 40 0.16
>gb|BE400455.1|BE400455 AWB003.H04F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB003.H04, mRNA sequence
Length = 401
Score = 168 bits (85), Expect = 3e-040
Identities = 166/193 (86%)
Strand = Plus / Plus
Query: 340 gggaggatgcccttctcctggaagcacacgacggtgtcgtacagcgcctgcgccgccggg 399
||||||| ||||||||||||||||| |||||||||||||| || ||||||| ||||
Sbjct: 209 gggaggacgcccttctcctggaagctgacgacggtgtcgtagaggcactgcgccaccggc 268
Query: 400 gtgaactccaggcccagctccctcagccgctggttggagatcttgtacggctgcttcctc 459
|||||||||||||||||||| | ||||||||||| || |||||||||||||||||||||
Sbjct: 269 gtgaactccaggcccagctcacggagccgctggttcgacatcttgtacggctgcttcctc 328
Query: 460 gggttcacctcgtcagagcacctctccgggacggggtagcccgggaaggacttgcggagg 519
|||||||||||||| |||||||| |||| |||||| | |||||| |||||||||||
Sbjct: 329 gggttcacctcgtccgagcacctgctggggatggggtactcggggaagaacttgcggagg 388
Query: 520 gtgcggacgacgt 532
|| ||||||||
Sbjct: 389 atggtgacgacgt 401
>gb|CA626399.1|CA626399 wl1n.pk0136.e9 wl1n Triticum aestivum cDNA clone wl1n.pk0136.e9 5'
end, mRNA sequence
Length = 514
Score = 167 bits (84), Expect = 1e-039
Identities = 129/141 (91%), Gaps = 3/141 (2%)
Strand = Plus / Minus
Query: 441 cttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgggacggggtagcc 500
||||||||| || ||| |||| ||||| | |||||||||| ||||||||||||| |||||
Sbjct: 504 cttgtacggntgtttcntcggnttcactt-gtcagagcacttctccgggacgggttagcc 446
Query: 501 cgggaaggacttgcggagggtgcggacgacgtcctcgcggtggagcacggcgtcggcgca 560
||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 445 cgggaag-acttgcggagggtgcggacga-gtcttcgcgttggagcacggcgtcggcgca 388
Query: 561 gatgtagcggccggcggcgcg 581
|||||||||||||||||||||
Sbjct: 387 gatgtagcggccggcggcgcg 367
>gb|CN008270.1|CN008270 WHE2639_C08_F15ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2639_C08_F15,
mRNA sequence
Length = 493
Score = 155 bits (78), Expect = 4e-036
Identities = 144/166 (86%)
Strand = Plus / Minus
Query: 387 ctgcgccgccggggtgaactccaggcccagctccctcagccgctggttggagatcttgta 446
||||||| |||| |||||||| ||||||||||| | ||||||||||| || ||||||||
Sbjct: 485 ctgcgccaccggcgtgaactcgaggcccagctcacggagccgctggttcgacatcttgta 426
Query: 447 cggctgcttcctcgggttcacctcgtcagagcacctctccgggacggggtagcccgggaa 506
|||||||||||||||||||||||||||||||||||| |||| || ||| | |||||
Sbjct: 425 cggctgcttcctcgggttcacctcgtcagagcacctgctggggatggagtactcggggaa 366
Query: 507 ggacttgcggagggtgcggacgacgtcctcgcggtggagcacggcg 552
| ||||||||||| || |||||||||||| |||||||||||||||
Sbjct: 365 gaacttgcggaggatggtgacgacgtcctcccggtggagcacggcg 320
>gb|BQ161883.1|BQ161883 WHE0484_c09_e18zT Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0484_c09_e18,
mRNA sequence
Length = 593
Score = 149 bits (75), Expect = 2e-034
Identities = 126/143 (88%)
Strand = Plus / Plus
Query: 340 gggaggatgcccttctcctggaagcacacgacggtgtcgtacagcgcctgcgccgccggg 399
||||||| ||||||||||||||||| |||||||||||||| || ||||||| ||||
Sbjct: 381 gggaggacgcccttctcctggaagctgacgacggtgtcgtagaggcactgcgccaccggc 440
Query: 400 gtgaactccaggcccagctccctcagccgctggttggagatcttgtacggctgcttcctc 459
|||||||| ||||||||||| | ||||||| ||| || ||||||||||||||||| |||
Sbjct: 441 gtgaactcgaggcccagctcacggagccgcttgttcgacatcttgtacggctgcttactc 500
Query: 460 gggttcacctcgtcagagcacct 482
|||||||||||||||||||||||
Sbjct: 501 gggttcacctcgtcagagcacct 523
>gb|CA626403.1|CA626403 wl1n.pk0136.d7 wl1n Triticum aestivum cDNA clone wl1n.pk0136.d7 5'
end, mRNA sequence
Length = 523
Score = 137 bits (69), Expect = 9e-031
Identities = 103/111 (92%), Gaps = 4/111 (3%)
Strand = Plus / Minus
Query: 471 gtcagagcacctctccgggacggggtagcccgggaaggacttgcggagggtgcggacgac 530
|||||||||| ||||||||||||| |||||||| | |||||||||||| ||||||||||
Sbjct: 473 gtcagagcacttctccgggacggg-tagcccggaa--gacttgcggagg-tgcggacgac 418
Query: 531 gtcctcgcggtggagcacggcgtcggcgcagatgtagcggccggcggcgcg 581
||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gtcntcgcgttggagcacggcgtcggcgcagatgtagcggccggcggcgcg 367
>gb|AL831268.1|AL831268 AL831268 q:242 Triticum aestivum cDNA clone E11_q242_plate_4, mRNA
sequence
Length = 485
Score = 133 bits (67), Expect = 1e-029
Identities = 125/143 (87%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 340 gggaggatgcccttctcctggaagcacacgacggtgtcgtacagcgcctgcgccgccggg 399
||||||| ||||||||||||||||| |||||||||||||| || |||||| ||||
Sbjct: 182 gggaggacgcccttctcctggaagctgacgacggtgtcgtagaggcactgcgctaccggc 123
Query: 400 gtgaactccaggcccagctccctcagccgctggttggagatcttgtacggctgcttcctc 459
|||||||| ||||||||||| | ||||||| |||| | ||||||||||||||||| |||
Sbjct: 122 gtgaactcgaggcccagctcacggagccgcttgttg-acatcttgtacggctgcttactc 64
Query: 460 gggttcacctcgtcagagcacct 482
|||||||||||||||||||||||
Sbjct: 63 gggttcacctcgtcagagcacct 41
>gb|CK206554.1|CK206554 FGAS018152 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1139
Score = 107 bits (54), Expect = 8e-022
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 672 ctggttggacatcttgtaaggctgcttccgtgggttcacctcgtcagagcaccttgttgg 613
Query: 489 gacggggtagcccgggaaggacttgcggagggtgcggacgacgtcctcgcggtggagcac 548
||||||||| | |||||| ||||| |||| || ||||||||||||||||||| || ||
Sbjct: 612 gacggggtactcggggaagagcttgccgaggatgtggacgacgtcctcgcggtgcaggac 553
Query: 549 ggcgtcggcgcagatgtagcggccgg 574
| |||||||||| || ||||||||
Sbjct: 552 gcgctcggcgcagaggtggcggccgg 527
>gb|CK209046.1|CK209046 FGAS020782 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1167
Score = 107 bits (54), Expect = 8e-022
Identities = 123/146 (84%)
Strand = Plus / Plus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 363 ctggttggacatcttgtaaggctgcttccgtgggttcacctcgtcagagcaccttgttgg 422
Query: 489 gacggggtagcccgggaaggacttgcggagggtgcggacgacgtcctcgcggtggagcac 548
||||||||| | |||||| ||||| |||| || ||||||||||||||||||| || ||
Sbjct: 423 gacggggtactcggggaagagcttgccgaggatgtggacgacgtcctcgcggtgcaggac 482
Query: 549 ggcgtcggcgcagatgtagcggccgg 574
| |||||||||| || ||||||||
Sbjct: 483 gcgctcggcgcagaggtggcggccgg 508
>gb|AF307997.1|AF307997 Triticum aestivum cinnamoyl-CoA reductase I mRNA, partial cds
Length = 696
Score = 107 bits (54), Expect = 8e-022
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 609 ctggttggacatcttgtaaggctgcttccgtgggttcacctcgtcagagcaccttgttgg 550
Query: 489 gacggggtagcccgggaaggacttgcggagggtgcggacgacgtcctcgcggtggagcac 548
||||||||| | |||||| ||||| |||| || ||||||||||||||||||| || ||
Sbjct: 549 gacggggtactcggggaagagcttgccgaggatgtggacgacgtcctcgcggtgcaggac 490
Query: 549 ggcgtcggcgcagatgtagcggccgg 574
| |||||||||| || ||||||||
Sbjct: 489 gcgctcggcgcagaggtggcggccgg 464
>gb|CA638309.1|CA638309 wre1n.pk0008.d2 wre1n Triticum aestivum cDNA clone wre1n.pk0008.d2
5' end, mRNA sequence
Length = 593
Score = 99.6 bits (50), Expect = 2e-019
Identities = 98/114 (85%)
Strand = Plus / Minus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| |||||||||||||||||||||||| ||
Sbjct: 129 ctggttggacatcttgtaaggctgcttccgcgggttcacctcgtcagagcaccttgttgg 70
Query: 489 gacggggtagcccgggaaggacttgcggagggtgcggacgacgtcctcgcggtg 542
||||||||| | |||||| |||| |||| || |||||||||||||||||||
Sbjct: 69 gacggggtactcggggaagagcttggcgaggatgtggacgacgtcctcgcggtg 16
>gb|CV759318.1|CV759318 FGAS053701 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 811
Score = 99.6 bits (50), Expect = 2e-019
Identities = 98/114 (85%)
Strand = Plus / Minus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 246 ctggttggacatcttgtaaggctgcttccgtgggttcacctcgtcagagcaccttgttgg 187
Query: 489 gacggggtagcccgggaaggacttgcggagggtgcggacgacgtcctcgcggtg 542
||||||||| | |||||| ||||| |||| || |||||||||||||||||||
Sbjct: 186 gacggggtactcggggaagagcttgccgaggatgtggacgacgtcctcgcggtg 133
>gb|BE403213.1|BE403213 WHE0426_G02_M04ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0426_G02_M04, mRNA
sequence
Length = 212
Score = 97.6 bits (49), Expect = 8e-019
Identities = 121/145 (83%)
Strand = Plus / Minus
Query: 430 tggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccggg 489
|||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 169 tggttggacatcttgtaaggctgcttccacgggttcacctcgtcagagcaccttgttggg 110
Query: 490 acggggtagcccgggaaggacttgcggagggtgcggacgacgtcctcgcggtggagcacg 549
|||||||| | |||||| |||| |||| || | ||||||||||||||||| || |||
Sbjct: 109 acggggtactcggggaagagcttggcgaggatgtgaacgacgtcctcgcggtgcaggacg 50
Query: 550 gcgtcggcgcagatgtagcggccgg 574
|||||||||| ||| |||||||
Sbjct: 49 cgctcggcgcagaggtaccggccgg 25
>gb|CD878098.1|CD878098 AZO4.101O08R011121 AZO4 Triticum aestivum cDNA clone AZO4101O08,
mRNA sequence
Length = 591
Score = 93.7 bits (47), Expect = 1e-017
Identities = 100/115 (86%), Gaps = 2/115 (1%)
Strand = Plus / Plus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 433 ctggttggacatcttgtaaggctgcttccgggggttcacctcgtcagagcaccttgttgg 492
Query: 489 gacggggtagcccgggaagga-cttgcggagggtgcggacgacgtcctcgcggtg 542
||||||||| | |||||| || ||||| |||| || |||||||||||||||||||
Sbjct: 493 gacggggta-ctcgggaaagagcttgccgaggatgtggacgacgtcctcgcggtg 546
>gb|CD929976.1|CD929976 GR45.109L15F010417 GR45 Triticum aestivum cDNA clone GR45109L15,
mRNA sequence
Length = 712
Score = 93.7 bits (47), Expect = 1e-017
Identities = 100/115 (86%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 408 ctggttggacatcttgtaaggctgcttccgtgggttcacctcgtcagagcaccttgttgg 349
Query: 489 gacggggtagcccgggaagga-cttgcggagggtgcggacgacgtcctcgcggtg 542
||||||||| | |||||| || ||||| |||| || |||||||||||||||||||
Sbjct: 348 gacggggta-ctcgggaaagagcttgccgaggatgtggacgacgtcctcgcggtg 295
>gb|CD929977.1|CD929977 GR45.109L15R010612 GR45 Triticum aestivum cDNA clone GR45109L15,
mRNA sequence
Length = 570
Score = 93.7 bits (47), Expect = 1e-017
Identities = 100/115 (86%), Gaps = 2/115 (1%)
Strand = Plus / Plus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 292 ctggttggacatcttgtaaggctgcttccgtgggttcacctcgtcagagcaccttgttgg 351
Query: 489 gacggggtagcccgggaagga-cttgcggagggtgcggacgacgtcctcgcggtg 542
||||||||| | |||||| || ||||| |||| || |||||||||||||||||||
Sbjct: 352 gacggggta-ctcgggaaagagcttgccgaggatgtggacgacgtcctcgcggtg 405
>gb|DR739700.1|DR739700 FGAS084917 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1056
Score = 93.7 bits (47), Expect = 1e-017
Identities = 100/115 (86%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 240 ctggttggacatcttgtaaggctgcttccgtgggttcacctcgtcagagcaccttgttgg 181
Query: 489 gacggggtagcccgggaagga-cttgcggagggtgcggacgacgtcctcgcggtg 542
||||||||| | |||||| || ||||| |||| || |||||||||||||||||||
Sbjct: 180 gacggggta-ctcgggaaagagcttgccgaggatgtggacgacgtcctcgcggtg 127
>gb|BQ168574.1|BQ168574 WHE2460_D05_G10ZT Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2460_D05_G10,
mRNA sequence
Length = 522
Score = 91.7 bits (46), Expect = 5e-017
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 343 ctggttggacatcttgtaaggctgcttccgtgggttcacctcgtcagagcaccttgttgg 402
Query: 489 gacggggtagcccgggaaggacttgcggagggtgcggacgacgtcctcgcggtg 542
||||||||| | |||||| ||||| ||| || |||||||||||||||||||
Sbjct: 403 gacggggtactcggggaagagcttgccaaggatgtggacgacgtcctcgcggtg 456
>gb|CA701379.1|CA701379 wkm2c.pk005.p10 wkm2c Triticum aestivum cDNA clone wkm2c.pk005.p10
5' end, mRNA sequence
Length = 556
Score = 91.7 bits (46), Expect = 5e-017
Identities = 96/113 (84%)
Strand = Plus / Minus
Query: 430 tggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccggg 489
|||||||| ||| |||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 394 tggttggacatcntgtaaggctgcttccgcgggttcacctcgtcagagcaccttgttggg 335
Query: 490 acggggtagcccgggaaggacttgcggagggtgcggacgacgtcctcgcggtg 542
|||||||| | |||||| |||| |||| || |||||||||||||||||||
Sbjct: 334 acggggtactcggggaagagcttggcgaggatgtggacgacgtcctcgcggtg 282
>gb|BM135067.1|BM135067 WHE0459_E07_E07ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0459_E07_E07,
mRNA sequence
Length = 428
Score = 85.7 bits (43), Expect = 3e-015
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 340 gggaggatgcccttctcctggaagcacacgacggtgtcgtacagcgcctgcgccgccggg 399
||||||| ||||||||||||||||| |||||||||||||| || ||||||| ||||
Sbjct: 121 gggaggacgcccttctcctggaagctgacgacggtgtcgtagaggcactgcgccaccggc 180
Query: 400 gtgaactccaggcccagctccctcagccgctggtt 434
|||||||| ||||||||||| | |||||||||||
Sbjct: 181 gtgaactcgaggcccagctcacggagccgctggtt 215
>gb|CD454939.1|CD454939 WHE2013_A04_A07ZT CS wheat drought stressed leaf cDNA library
Triticum aestivum cDNA clone WHE2013_A04_A07, mRNA
sequence
Length = 565
Score = 85.7 bits (43), Expect = 3e-015
Identities = 122/147 (82%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacctctccgg 488
||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 409 ctggttggacatcttgtaaggctgcttccgtgggttcacctcgtcagagcaccttgttgg 468
Query: 489 gacggggtagcccgggaagga-cttgcggagggtgcggacgacgtcctcgcggtggagca 547
||||||||| | ||||| || ||||| |||| || |||| || ||||||||||| || |
Sbjct: 469 gacggggtactcggggaaagagcttgccgaggatgtggacaacttcctcgcggtgcagga 528
Query: 548 cggcgtcggcgcagatgtagcggccgg 574
|| | |||||||| | || ||||||||
Sbjct: 529 cgccctcggcgcaaaggtggcggccgg 555
>gb|BJ320121.1|BJ320121 BJ320121 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf13i24 3', mRNA sequence
Length = 351
Score = 75.8 bits (38), Expect = 3e-012
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 429 ctggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacct 482
||||||||| |||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 296 ctggttggacatcttgtaaggctgcttccgtgggttcacctcgtcagagcacct 349
>gb|BE492747.1|BE492747 WHE0564_C06_C06ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0564_C06_C06, mRNA
sequence
Length = 322
Score = 69.9 bits (35), Expect = 2e-010
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 460 gggttcacctcgtcagagcacctctccgggacggggtagcccgggaaggacttgcggagg 519
||||||||||||||||||||||| ||||||||||| | |||||| ||||| |||
Sbjct: 321 gggttcacctcgtcagagcaccttgttgggacggggtactcggggaagagcttgccaagg 262
Query: 520 gtgcggacgacgtcctcgcggtggagcacggcgtcggcgcagatgtagcggccgg 574
|| ||||||||||||||||||| || ||| |||||||||| || ||||||||
Sbjct: 261 atgtggacgacgtcctcgcggtgcaggacgcgctcggcgcagaggtggcggccgg 207
>gb|BM140515.1|BM140515 WHE0484_c09_e18zS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0484_c09_e18,
mRNA sequence
Length = 514
Score = 61.9 bits (31), Expect = 4e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 502 gggaaggacttgcggagggtgcggacgacgtcctcgcggtggagcacggcg 552
|||||| ||||||||||| || |||||||||||| |||||||||||||||
Sbjct: 294 gggaagaacttgcggaggatggtgacgacgtcctcccggtggagcacggcg 244
>gb|CA651188.1|CA651188 wre1n.pk180.e11 wre1n Triticum aestivum cDNA clone wre1n.pk180.e11
5' end, mRNA sequence
Length = 505
Score = 61.9 bits (31), Expect = 4e-008
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 430 tggttggagatcttgtacggctgcttcctcgggttcacctcgtcagagcacct 482
||| |||| |||||||| |||||||||| ||||| |||||||||||||||||
Sbjct: 220 tggntggacatcttgtaaggctgcttccgtgggttnacctcgtcagagcacct 168
>gb|CA701459.1|CA701459 wkm2c.pk006.e23 wkm2c Triticum aestivum cDNA clone wkm2c.pk006.e23
5' end, mRNA sequence
Length = 399
Score = 60.0 bits (30), Expect = 2e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 340 gggaggatgcccttctcctggaagcacacgacggtgtcgtacagcgcctgcgccgccggg 399
|||||||| |||||||||||||||| || ||||||||||| || ||||||| ||||
Sbjct: 74 gggaggattcccttctcctggaagctgaccacggtgtcgtagaggcactgcgccaccggc 15
Query: 400 gtgaactccaggcc 413
|||||||| |||||
Sbjct: 14 gtgaactcgaggcc 1
>gb|CA626223.1|CA626223 wl1n.pk0135.b7 wl1n Triticum aestivum cDNA clone wl1n.pk0135.b7 5'
end, mRNA sequence
Length = 527
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 429 ctggttggagatcttgtacggctgcttcc 457
||||||||||| |||||||||||||||||
Sbjct: 358 ctggttggagaacttgtacggctgcttcc 386
>gb|CK162668.1|CK162668 FGAS015267 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1036
Score = 50.1 bits (25), Expect = 2e-004
Identities = 72/84 (85%), Gaps = 4/84 (4%)
Strand = Plus / Minus
Query: 459 cgggttcacctcgtcagagcacctctccgggacggggtagcccgggaaggacttgcggag 518
|||||||||||||||||||||||| | ||||||||||| | ||||||| |||| |||
Sbjct: 942 cgggttcacctcgtcagagcacctgt--gggacggggta-ctcgggaagagcttggcgag 886
Query: 519 ggtgcggacgacgtcctcgcggtg 542
| || ||||||||||||||||||
Sbjct: 885 gatg-tgacgacgtcctcgcggtg 863
>gb|BG606906.1|BG606906 WHE2454_H04_P08ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2454_H04_P08,
mRNA sequence
Length = 437
Score = 48.1 bits (24), Expect = 7e-004
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 400 gtgaactccaggcccagctccctcagccgctggttggagatcttgtacggct 451
|||||||||| ||||||||||||| || | |||| |||| |||||||||||
Sbjct: 304 gtgaactccaaccccagctccctcaacctcaggtttgagaacttgtacggct 355
>gb|BG607491.1|BG607491 WHE2494_D10_H20ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2494_D10_H20,
mRNA sequence
Length = 466
Score = 48.1 bits (24), Expect = 7e-004
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 400 gtgaactccaggcccagctccctcagccgctggttggagatcttgtacggct 451
|||||||||| ||||||||||||| || | |||| |||| |||||||||||
Sbjct: 342 gtgaactccaaccccagctccctcaacctcaggtttgagaacttgtacggct 393
>gb|BJ314634.1|BJ314634 BJ314634 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf13i24 5', mRNA sequence
Length = 380
Score = 48.1 bits (24), Expect = 7e-004
Identities = 50/56 (89%), Gaps = 2/56 (3%)
Strand = Plus / Minus
Query: 429 ctggttggagat-cttgtacggctgctt-cctcgggttcacctcgtcagagcacct 482
||||||||| || |||||| |||||||| || |||||||||||||||||||||||
Sbjct: 59 ctggttggacatncttgtaaggctgcttnccgtgggttcacctcgtcagagcacct 4
>gb|CA731337.1|CA731337 wip1c.pk006.p20 wip1c Triticum aestivum cDNA clone wip1c.pk006.p20
5' end, mRNA sequence
Length = 637
Score = 48.1 bits (24), Expect = 7e-004
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 400 gtgaactccaggcccagctccctcagccgctggttggagatcttgtacggct 451
|||||||||| ||||||||||||| || | |||| |||| |||||||||||
Sbjct: 432 gtgaactccaaccccagctccctcaacctcaggtttgagaacttgtacggct 381
>gb|CD878802.1|CD878802 AZO4.103K12R011122 AZO4 Triticum aestivum cDNA clone AZO4103K12,
mRNA sequence
Length = 644
Score = 48.1 bits (24), Expect = 7e-004
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 400 gtgaactccaggcccagctccctcagccgctggttggagatcttgtacggct 451
|||||||||| |||||||||||||||| | |||| |||| |||||| ||||
Sbjct: 298 gtgaactccaaccccagctccctcagcctcaggttcgagaacttgtaaggct 349
>gb|BM137612.1|BM137612 WHE0483-0486_E18_E18ZS Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0483-0486_E18_E18, mRNA sequence
Length = 260
Score = 46.1 bits (23), Expect = 0.003
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 502 gggaaggacttgcggagggtgcggacgacgtcctcgcggtggagcacggcg 552
|||||| |||||||||| || ||| |||||||| |||||||||||||||
Sbjct: 247 gggaagaacttgcggagaatggtgaccacgtcctcccggtggagcacggcg 197
>gb|DR739379.1|DR739379 FGAS084596 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1092
Score = 46.1 bits (23), Expect = 0.003
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 524 ggacgacgtcctcgcggtggagcacggcgtcggcgcagatgtagcggccgg 574
||||||||||||||||||| || ||| |||||||||| || ||||||||
Sbjct: 957 ggacgacgtcctcgcggtgcagaacgcgctcggcgcagaggtggcggccgg 907
>gb|CA688541.1|CA688541 wlm96.pk041.i8 wlm96 Triticum aestivum cDNA clone wlm96.pk041.i8 5'
end, mRNA sequence
Length = 444
Score = 44.1 bits (22), Expect = 0.011
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 503 ggaaggacttgcggagggtgcggacgacgtcctcgcggtggagcac 548
||||| ||||||||||| || |||||||||||| || ||||||||
Sbjct: 366 ggaagaacttgcggaggatggtgacgacgtcctcccgttggagcac 321
>gb|BE415150.1|BE415150 MWL023.B03F991217 ITEC MWL Wheat Root Library Triticum aestivum
cDNA clone MWL023.B03, mRNA sequence
Length = 299
Score = 42.1 bits (21), Expect = 0.042
Identities = 37/43 (86%)
Strand = Plus / Minus
Query: 509 acttgcggagggtgcggacgacgtcctcgcggtggagcacggc 551
||||||| ||| || |||||||||||| ||||| ||||||||
Sbjct: 170 acttgcgnaggatggtgacgacgtcctcccggtgnagcacggc 128
>gb|BE428652.1|BE428652 MTD009.D05F990617 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD009.D05, mRNA
sequence
Length = 385
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 153 tcggcgcagatgtagcggccg 133
>gb|BG608297.1|BG608297 WHE2470_F07_L14ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2470_F07_L14,
mRNA sequence
Length = 353
Score = 42.1 bits (21), Expect = 0.042
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 400 gtgaactccaggcccagctccctcagccgctggttggagatcttgtacg 448
|||||||||| ||||||||||||| || | |||| |||| ||||||||
Sbjct: 305 gtgaactccaaccccagctccctcaacctcaggtttgagaacttgtacg 353
>gb|BJ278739.1|BJ278739 BJ278739 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr17i23 5', mRNA sequence
Length = 702
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 235 tcggcgcagatgtagcggccg 215
>gb|BJ283791.1|BJ283791 BJ283791 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr17i23 3', mRNA sequence
Length = 724
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 502 tcggcgcagatgtagcggccg 522
>gb|BQ483834.1|BQ483834 WHE3513_B09_C17ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3513_B09_C17, mRNA sequence
Length = 710
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 157 tcggcgcagatgtagcggccg 137
>gb|BQ743760.1|BQ743760 WHE4107_H01_P01ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4107_H01_P01, mRNA sequence
Length = 603
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 462 tcggcgcagatgtagcggccg 442
>gb|BQ752927.1|BQ752927 WHE4120_G07_N14ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4120_G07_N14, mRNA sequence
Length = 759
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 226 tcggcgcagatgtagcggccg 206
>gb|BQ788904.1|BQ788904 WHE4155_B07_C13ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4155_B07_C13, mRNA sequence
Length = 630
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 72 tcggcgcagatgtagcggccg 52
>gb|CK203475.1|CK203475 FGAS012005 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 855
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 332 tcggcgcagatgtagcggccg 312
>gb|CK203828.1|CK203828 FGAS012361 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 835
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 331 tcggcgcagatgtagcggccg 311
>gb|CK211662.1|CK211662 FGAS023514 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1151
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 563 tcggcgcagatgtagcggccg 583
>gb|AY008295.1| Triticum aestivum cinnamoyl-CoA reductase mRNA, partial cds
Length = 498
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 284 tcggcgcagatgtagcggccg 264
>gb|AY771357.1| Triticum aestivum cultivar H4564 cinnamoyl-CoA reductase mRNA,
complete cds
Length = 1489
Score = 42.1 bits (21), Expect = 0.042
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 553 tcggcgcagatgtagcggccg 573
|||||||||||||||||||||
Sbjct: 933 tcggcgcagatgtagcggccg 913
>gb|BE424798.1|BE424798 WHE0090_G10_N20ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0090_G10_N20, mRNA sequence
Length = 472
Score = 40.1 bits (20), Expect = 0.16
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 400 gtgaactccaggcccagctccctcagccgctggttggagatcttgtacggct 451
|||||||||| ||||| ||||| |||| ||||| |||| |||||||||||
Sbjct: 329 gtgaactccaaccccaggtccctgagcctttggttcgagaacttgtacggct 380
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 156,185
Number of Sequences: 636343
Number of extensions: 156185
Number of successful extensions: 49968
Number of sequences better than 0.5: 50
Number of HSP's better than 0.5 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49856
Number of HSP's gapped (non-prelim): 92
length of query: 581
length of database: 367,240,239
effective HSP length: 19
effective length of query: 562
effective length of database: 355,149,722
effective search space: 199594143764
effective search space used: 199594143764
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)