BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2621786.2.1
(623 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ307988.1|BJ307988 BJ307988 Y. Ogihara unpublished cDNA... 311 3e-083
gb|CK151644.1|CK151644 FGAS034295 Triticum aestivum FGAS: T... 295 2e-078
gb|CD877306.1|CD877306 AZO4.100A13R011121 AZO4 Triticum aes... 262 3e-068
gb|BJ298930.1|BJ298930 BJ298930 Y. Ogihara unpublished cDNA... 248 4e-064
gb|BE492817.1|BE492817 WHE0565_C03_C03ZE Triticum monococcu... 244 6e-063
gb|BJ302166.1|BJ302166 BJ302166 Y. Ogihara unpublished cDNA... 236 1e-060
gb|BJ297825.1|BJ297825 BJ297825 Y. Ogihara unpublished cDNA... 226 1e-057
gb|BJ292682.1|BJ292682 BJ292682 Y. Ogihara unpublished cDNA... 214 5e-054
gb|BJ291215.1|BJ291215 BJ291215 Y. Ogihara unpublished cDNA... 210 8e-053
gb|BJ249218.1|BJ249218 BJ249218 Y. Ogihara unpublished cDNA... 206 1e-051
gb|CD875955.1|CD875955 AZO3.108A09R011126 AZO3 Triticum aes... 202 2e-050
gb|CA688042.1|CA688042 wlm96.pk037.o19 wlm96 Triticum aesti... 182 2e-044
gb|BJ255477.1|BJ255477 BJ255477 Y. Ogihara unpublished cDNA... 155 4e-036
gb|BJ299121.1|BJ299121 BJ299121 Y. Ogihara unpublished cDNA... 151 7e-035
gb|BJ292445.1|BJ292445 BJ292445 Y. Ogihara unpublished cDNA... 145 4e-033
gb|BJ220822.1|BJ220822 BJ220822 Y. Ogihara unpublished cDNA... 145 4e-033
gb|CA681031.1|CA681031 wlm24.pk0022.g2 wlm24 Triticum aesti... 145 4e-033
gb|CA681029.1|CA681029 wlm24.pk0022.g1 wlm24 Triticum aesti... 117 9e-025
gb|CA629557.1|CA629557 wle1n.pk0026.d11 wle1n Triticum aest... 109 2e-022
gb|CA618933.1|CA618933 wl1n.pk0042.c2 wl1n Triticum aestivu... 80 2e-013
>gb|BJ307988.1|BJ307988 BJ307988 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd13o18 3', mRNA sequence
Length = 673
Score = 311 bits (157), Expect = 3e-083
Identities = 319/373 (85%)
Strand = Plus / Minus
Query: 6 ccgcccgggactgggggttcgcgggggactacgtcgaggcaatgtggctcatgctgcagc 65
||||| |||||||||| ||||| ||||||||||| ||||| |||||||||||||| ||||
Sbjct: 596 ccgccagggactggggcttcgccggggactacgtggaggccatgtggctcatgctccagc 537
Query: 66 aggaacagccgggggattacgtcgtcgccactgaggagtcccacaccgtcgaggagttcc 125
|||| |||| | || || ||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 536 aggacaagcctgacgactatgtcgtcgccaccgaggagtgccacaccgtggaggagttct 477
Query: 126 tgcaggctgccttcggctacgccggcctcagctggaaggatcacgtggtcattgacaaga 185
||||||| || || || ||||||||||||| |||||||||||| ||||| ||||||||||
Sbjct: 476 tgcaggccgcttttgggtacgccggcctcaactggaaggatcatgtggtgattgacaaga 417
Query: 186 agtacttccggcctgcagaagtcgacagcctcaagggggacgccaccaaggcgaggaagg 245
||||||| |||||| | || || ||| |||| ||||||| | ||||| |||||| |
Sbjct: 416 agtactttcggccttcggaggtggactgccttcagggggattcatccaagtcgaggagag 357
Query: 246 tgctcaagtggaagcccaaggttgggttccaggagctcgtggagatgatggtcgatcacg 305
|||| |||||||||||||||||| |||||| |||| || ||||||||||| ||| |||
Sbjct: 356 tgcttgggtggaagcccaaggttggcttccagcagctggttgagatgatggttgataacg 297
Query: 306 acattgagctcgccaagaaggagaaggttctggtggatgctgggttccgtgatcccaagc 365
|||| ||||||||||||||||||||||| || ||||||||||||| ||| || |||||||
Sbjct: 296 acatcgagctcgccaagaaggagaaggtccttgtggatgctgggtaccgcgaccccaagc 237
Query: 366 agcagccatagaa 378
|||||||||||||
Sbjct: 236 agcagccatagaa 224
>gb|CK151644.1|CK151644 FGAS034295 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 858
Score = 295 bits (149), Expect = 2e-078
Identities = 317/373 (84%)
Strand = Plus / Minus
Query: 6 ccgcccgggactgggggttcgcgggggactacgtcgaggcaatgtggctcatgctgcagc 65
||||| |||||||||| ||||| |||| ||||| ||||| |||||||||||||| ||||
Sbjct: 776 ccgccagggactggggcttcgccgggggatacgtggaggccatgtggctcatgctccagc 717
Query: 66 aggaacagccgggggattacgtcgtcgccactgaggagtcccacaccgtcgaggagttcc 125
|||| |||| | || || ||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 716 aggacaagcctgacgactatgtcgtcgccaccgaggagtgccacaccgtggaggagttct 657
Query: 126 tgcaggctgccttcggctacgccggcctcagctggaaggatcacgtggtcattgacaaga 185
||||||| || || || ||||||||||||| |||||||||||| ||||| ||||||||||
Sbjct: 656 tgcaggccgcttttgggtacgccggcctcaactggaaggatcatgtggtgattgacaaga 597
Query: 186 agtacttccggcctgcagaagtcgacagcctcaagggggacgccaccaaggcgaggaagg 245
||||||| |||||| | || || ||| |||| ||||||| | ||||| |||||| |
Sbjct: 596 agtactttcggccttcggaggtggactgccttcagggggattcatccaagtcgaggagag 537
Query: 246 tgctcaagtggaagcccaaggttgggttccaggagctcgtggagatgatggtcgatcacg 305
|||| |||||||||||||||||| |||||| |||| || ||||||||||| ||| |||
Sbjct: 536 tgcttgggtggaagcccaaggttggcttccagcagctggttgagatgatggttgataacg 477
Query: 306 acattgagctcgccaagaaggagaaggttctggtggatgctgggttccgtgatcccaagc 365
|||| ||||||||||||||||||||||| || ||||||||||||| ||| || |||||||
Sbjct: 476 acatcgagctcgccaagaaggagaaggtccttgtggatgctgggtaccgcgaccccaagc 417
Query: 366 agcagccatagaa 378
|||||||||||||
Sbjct: 416 agcagccatagaa 404
>gb|CD877306.1|CD877306 AZO4.100A13R011121 AZO4 Triticum aestivum cDNA clone AZO4100A13,
mRNA sequence
Length = 666
Score = 262 bits (132), Expect = 3e-068
Identities = 312/372 (83%)
Strand = Plus / Minus
Query: 6 ccgcccgggactgggggttcgcgggggactacgtcgaggcaatgtggctcatgctgcagc 65
||||| |||| ||||| ||||| ||||| || || ||||| |||||||||||||| ||||
Sbjct: 589 ccgccagggattggggcttcgccggggattatgttgaggccatgtggctcatgctccagc 530
Query: 66 aggaacagccgggggattacgtcgtcgccactgaggagtcccacaccgtcgaggagttcc 125
|||| |||| | ||||| || ||||||||||| |||| ||||||||| |||||||||
Sbjct: 529 aggacaagcctgatgattatgttgtcgccactgaagagtgccacaccgtggaggagttct 470
Query: 126 tgcaggctgccttcggctacgccggcctcagctggaaggatcacgtggtcattgacaaga 185
|||||||||| || || || |||||||||| |||||||||||| ||||||||||||||||
Sbjct: 469 tgcaggctgcttttgggtatgccggcctcaactggaaggatcatgtggtcattgacaaga 410
Query: 186 agtacttccggcctgcagaagtcgacagcctcaagggggacgccaccaaggcgaggaagg 245
||||||| || ||| | || || ||| |||| |||| || | ||||| | |||| |
Sbjct: 409 agtactttcgcccttcggaggtggactgcctgcagggagattcatccaagtcaaggagag 350
Query: 246 tgctcaagtggaagcccaaggttgggttccaggagctcgtggagatgatggtcgatcacg 305
|||| |||||||||||||||||| |||||| |||| || ||||||||||| ||| |||
Sbjct: 349 tgcttgggtggaagcccaaggttggcttccagcagctagttgagatgatggttgataacg 290
Query: 306 acattgagctcgccaagaaggagaaggttctggtggatgctgggttccgtgatcccaagc 365
|||| ||||| ||||||||||||||||| || ||||||||||||| ||| || |||||||
Sbjct: 289 acatcgagcttgccaagaaggagaaggtccttgtggatgctgggtaccgcgaccccaagc 230
Query: 366 agcagccataga 377
||||||||||||
Sbjct: 229 agcagccataga 218
>gb|BJ298930.1|BJ298930 BJ298930 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl27m07 3', mRNA sequence
Length = 551
Score = 248 bits (125), Expect = 4e-064
Identities = 284/337 (84%)
Strand = Plus / Minus
Query: 41 gaggcaatgtggctcatgctgcagcaggaacagccgggggattacgtcgtcgccactgag 100
||||| |||||||||||||| |||||||| |||| | ||||| || |||||||||||
Sbjct: 543 gaggccatgtggctcatgctccagcaggacaagcctgatgattatgttgtcgccactgaa 484
Query: 101 gagtcccacaccgtcgaggagttcctgcaggctgccttcggctacgccggcctcagctgg 160
|||| ||||||||| ||||||||| |||||||||| || || || |||||||||| ||||
Sbjct: 483 gagtgccacaccgtggaggagttcttgcaggctgcttttgggtatgccggcctcaactgg 424
Query: 161 aaggatcacgtggtcattgacaagaagtacttccggcctgcagaagtcgacagcctcaag 220
|||||||| ||||||||||||||||||||||| || ||| | || || ||| |||| ||
Sbjct: 423 aaggatcatgtggtcattgacaagaagtactttcgcccttcggaggtggactgcctgcag 364
Query: 221 ggggacgccaccaaggcgaggaaggtgctcaagtggaagcccaaggttgggttccaggag 280
|| || | ||||| | |||| ||||| |||||||||||||||||| |||||| ||
Sbjct: 363 ggagattcatccaagtcaaggagagtgcttgggtggaagcccaaggttggcttccagcag 304
Query: 281 ctcgtggagatgatggtcgatcacgacattgagctcgccaagaaggagaaggttctggtg 340
|| || ||||||||||| ||| ||||||| ||||| ||||||||||||||||| || |||
Sbjct: 303 ctagttgagatgatggttgataacgacatcgagcttgccaagaaggagaaggtccttgtg 244
Query: 341 gatgctgggttccgtgatcccaagcagcagccataga 377
|||||||||| ||| || |||||||||||||||||||
Sbjct: 243 gatgctgggtaccgcgaccccaagcagcagccataga 207
>gb|BE492817.1|BE492817 WHE0565_C03_C03ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0565_C03_C03, mRNA
sequence
Length = 525
Score = 244 bits (123), Expect = 6e-063
Identities = 246/287 (85%)
Strand = Plus / Plus
Query: 91 cgccactgaggagtcccacaccgtcgaggagttcctgcaggctgccttcggctacgccgg 150
||||||||| |||| ||||||||| ||||||||| |||||||||| || || || |||||
Sbjct: 9 cgccactgaagagtgccacaccgtggaggagttcttgcaggctgcttttgggtatgccgg 68
Query: 151 cctcagctggaaggatcacgtggtcattgacaagaagtacttccggcctgcagaagtcga 210
||||| |||||||||||| ||||||||||||||||||||||| || ||| | || || ||
Sbjct: 69 cctcaactggaaggatcatgtggtcattgacaagaagtactttcgcccttcggaggtgga 128
Query: 211 cagcctcaagggggacgccaccaaggcgaggaaggtgctcaagtggaagcccaaggttgg 270
| |||| |||| || || ||||| |||||| |||||| ||||||||||||||||||
Sbjct: 129 ctgcctgcagggagattcctccaagtcgaggagagtgctcgggtggaagcccaaggttgg 188
Query: 271 gttccaggagctcgtggagatgatggtcgatcacgacattgagctcgccaagaaggagaa 330
|||||| |||| || ||||||||||| || ||||||| ||||||||||||||||||||
Sbjct: 189 cttccagcagctagttgagatgatggttgacaacgacatcgagctcgccaagaaggagaa 248
Query: 331 ggttctggtggatgctgggttccgtgatcccaagcagcagccataga 377
||| || ||||||||||||| ||| || |||||||||||||||||||
Sbjct: 249 ggtccttgtggatgctgggtaccgcgaccccaagcagcagccataga 295
>gb|BJ302166.1|BJ302166 BJ302166 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd13o18 5', mRNA sequence
Length = 608
Score = 236 bits (119), Expect = 1e-060
Identities = 266/315 (84%)
Strand = Plus / Plus
Query: 6 ccgcccgggactgggggttcgcgggggactacgtcgaggcaatgtggctcatgctgcagc 65
||||| |||||||||| ||||| ||||||||||| ||||| |||||||||||||| ||||
Sbjct: 294 ccgccagggactggggcttcgccggggactacgtggaggccatgtggctcatgctccagc 353
Query: 66 aggaacagccgggggattacgtcgtcgccactgaggagtcccacaccgtcgaggagttcc 125
|||| |||| | || || ||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 354 aggacaagcctgacgactatgtcgtcgccaccgaggagtgccacaccgtggaggagttct 413
Query: 126 tgcaggctgccttcggctacgccggcctcagctggaaggatcacgtggtcattgacaaga 185
||||||| || || || ||||||||||||| |||||||||||| ||||| ||||||||||
Sbjct: 414 tgcaggccgcttttgggtacgccggcctcaactggaaggatcatgtggtgattgacaaga 473
Query: 186 agtacttccggcctgcagaagtcgacagcctcaagggggacgccaccaaggcgaggaagg 245
||||||| |||||| | || || ||| |||| ||||||| | ||||| |||||| |
Sbjct: 474 agtactttcggccttcggaggtggactgccttcagggggattcatccaagtcgaggagag 533
Query: 246 tgctcaagtggaagcccaaggttgggttccaggagctcgtggagatgatggtcgatcacg 305
|||| |||||||||||||||||| |||||| |||| || ||||||||||| ||| |||
Sbjct: 534 tgcttgggtggaagcccaaggttggcttccagcagctggttgagatgatggttgataacg 593
Query: 306 acattgagctcgcca 320
|||| ||||||||||
Sbjct: 594 acatcgagctcgcca 608
>gb|BJ297825.1|BJ297825 BJ297825 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl22e05 3', mRNA sequence
Length = 512
Score = 226 bits (114), Expect = 1e-057
Identities = 252/298 (84%)
Strand = Plus / Minus
Query: 80 gattacgtcgtcgccactgaggagtcccacaccgtcgaggagttcctgcaggctgccttc 139
||||| || ||||||||||| |||| ||||||||| ||||||||| |||||||||| ||
Sbjct: 505 gattatgttgtcgccactgaagagtgccacaccgtggaggagttcttgcaggctgctttt 446
Query: 140 ggctacgccggcctcagctggaaggatcacgtggtcattgacaagaagtacttccggcct 199
|| || |||||||||| |||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 445 gggtatgccggcctcaactggaaggatcatgtggtcattgacaagaagtactttcgccct 386
Query: 200 gcagaagtcgacagcctcaagggggacgccaccaaggcgaggaaggtgctcaagtggaag 259
| || || ||| |||| |||| || | ||||| | |||| ||||| |||||||
Sbjct: 385 tcggaggtggactgcctgcagggagattcatccaagtcaaggagagtgcttgggtggaag 326
Query: 260 cccaaggttgggttccaggagctcgtggagatgatggtcgatcacgacattgagctcgcc 319
||||||||||| |||||| |||| || ||||||||||| ||| ||||||| ||||| |||
Sbjct: 325 cccaaggttggcttccagcagctagttgagatgatggttgataacgacatcgagcttgcc 266
Query: 320 aagaaggagaaggttctggtggatgctgggttccgtgatcccaagcagcagccataga 377
|||||||||||||| || ||||||||||||| ||| || |||||||||||||||||||
Sbjct: 265 aagaaggagaaggtccttgtggatgctgggtaccgcgaccccaagcagcagccataga 208
>gb|BJ292682.1|BJ292682 BJ292682 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl28m07 5', mRNA sequence
Length = 296
Score = 214 bits (108), Expect = 5e-054
Identities = 240/284 (84%)
Strand = Plus / Plus
Query: 94 cactgaggagtcccacaccgtcgaggagttcctgcaggctgccttcggctacgccggcct 153
|||||| |||| ||||||||| ||||||||| |||||||||| || || || ||||||||
Sbjct: 1 cactgaagagtgccacaccgtggaggagttcttgcaggctgcttttgggtatgccggcct 60
Query: 154 cagctggaaggatcacgtggtcattgacaagaagtacttccggcctgcagaagtcgacag 213
|| |||||||||||| ||||||||||||||||||||||| || ||| | || || ||| |
Sbjct: 61 caactggaaggatcatgtggtcattgacaagaagtactttcgcccttcggaggtggactg 120
Query: 214 cctcaagggggacgccaccaaggcgaggaaggtgctcaagtggaagcccaaggttgggtt 273
||| |||| || | ||||| | |||| ||||| |||||||||||||||||| ||
Sbjct: 121 cctgcagggagattcatccaagtcaaggagagtgcttgggtggaagcccaaggttggctt 180
Query: 274 ccaggagctcgtggagatgatggtcgatcacgacattgagctcgccaagaaggagaaggt 333
|||| |||| || ||||||||||| ||| ||||||| ||||| |||||||||||||||||
Sbjct: 181 ccagcagctagttgagatgatggttgataacgacatcgagcttgccaagaaggagaaggt 240
Query: 334 tctggtggatgctgggttccgtgatcccaagcagcagccataga 377
|| ||||||||||||| ||| || |||||||||||||||||||
Sbjct: 241 ccttgtggatgctgggtaccgcgaccccaagcagcagccataga 284
>gb|BJ291215.1|BJ291215 BJ291215 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl22e05 5', mRNA sequence
Length = 528
Score = 210 bits (106), Expect = 8e-053
Identities = 238/282 (84%)
Strand = Plus / Plus
Query: 96 ctgaggagtcccacaccgtcgaggagttcctgcaggctgccttcggctacgccggcctca 155
|||| |||| ||||||||| ||||||||| |||||||||| || || || ||||||||||
Sbjct: 21 ctgaagagtgccacaccgtggaggagttcttgcaggctgcttttgggtatgccggcctca 80
Query: 156 gctggaaggatcacgtggtcattgacaagaagtacttccggcctgcagaagtcgacagcc 215
|||||||||||| ||||||||||||||||||||||| || ||| | || || ||| |||
Sbjct: 81 actggaaggatcatgtggtcattgacaagaagtactttcgcccttcggaggtggactgcc 140
Query: 216 tcaagggggacgccaccaaggcgaggaaggtgctcaagtggaagcccaaggttgggttcc 275
| |||| || | ||||| | |||| ||||| |||||||||||||||||| ||||
Sbjct: 141 tgcagggagattcatccaagtcaaggagagtgcttgggtggaagcccaaggttggcttcc 200
Query: 276 aggagctcgtggagatgatggtcgatcacgacattgagctcgccaagaaggagaaggttc 335
|| |||| || ||||||||||| ||| ||||||| ||||| ||||||||||||||||| |
Sbjct: 201 agcagctagttgagatgatggttgataacgacatcgagcttgccaagaaggagaaggtcc 260
Query: 336 tggtggatgctgggttccgtgatcccaagcagcagccataga 377
| ||||||||||||| ||| || |||||||||||||||||||
Sbjct: 261 ttgtggatgctgggtaccgcgaccccaagcagcagccataga 302
>gb|BJ249218.1|BJ249218 BJ249218 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23o21 5', mRNA sequence
Length = 358
Score = 206 bits (104), Expect = 1e-051
Identities = 203/236 (86%)
Strand = Plus / Plus
Query: 143 tacgccggcctcagctggaaggatcacgtggtcattgacaagaagtacttccggcctgca 202
||||||||||||| |||||||||||| ||||| ||||||||||||||||| |||||| |
Sbjct: 23 tacgccggcctcaactggaaggatcatgtggtgattgacaagaagtactttcggccttcg 82
Query: 203 gaagtcgacagcctcaagggggacgccaccaaggcgaggaaggtgctcaagtggaagccc 262
|| || ||| |||| ||||||| | ||||| |||||| ||||| ||||||||||
Sbjct: 83 gaggtggactgccttcagggggattcatccaagtcgaggagagtgcttgggtggaagccc 142
Query: 263 aaggttgggttccaggagctcgtggagatgatggtcgatcacgacattgagctcgccaag 322
|||||||| |||||| |||| || ||||||||||| ||| ||||||| ||||||||||||
Sbjct: 143 aaggttggcttccagcagctggttgagatgatggttgataacgacatcgagctcgccaag 202
Query: 323 aaggagaaggttctggtggatgctgggttccgtgatcccaagcagcagccatagaa 378
||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 203 aaggagaaggtccttgtggatgctgggtaccgcgaccccaagcagcagccatagaa 258
>gb|CD875955.1|CD875955 AZO3.108A09R011126 AZO3 Triticum aestivum cDNA clone AZO3108A09,
mRNA sequence
Length = 567
Score = 202 bits (102), Expect = 2e-050
Identities = 247/294 (84%), Gaps = 1/294 (0%)
Strand = Plus / Minus
Query: 86 gtcgtcgccactgaggagtcccaca-ccgtcgaggagttcctgcaggctgccttcggcta 144
||||||||||| ||||||| || | |||| ||||||||| ||||||| || || || ||
Sbjct: 549 gtcgtcgccaccgaggagtgcctcctccgtggaggagttcttgcaggccgcttttgggta 490
Query: 145 cgccggcctcagctggaaggatcacgtggtcattgacaagaagtacttccggcctgcaga 204
||||||||||| |||||||||||| ||||| |||||| |||||||||| |||||| | ||
Sbjct: 489 cgccggcctcaactggaaggatcatgtggtgattgaccagaagtactttcggccttcgga 430
Query: 205 agtcgacagcctcaagggggacgccaccaaggcgaggaaggtgctcaagtggaagcccaa 264
|| ||| |||| ||||||| | || || |||||| ||||| ||||||||||||
Sbjct: 429 ggtggactgccttcagggggattcatcctagtcgaggagagtgcttgggtggaagcccaa 370
Query: 265 ggttgggttccaggagctcgtggagatgatggtcgatcacgacattgagctcgccaagaa 324
|||||| |||||| |||| || ||||||||||| ||| ||||||| ||||||||| ||||
Sbjct: 369 ggttggcttccagcagctggttgagatgatggttgataacgacatcgagctcgcctagaa 310
Query: 325 ggagaaggttctggtggatgctgggttccgtgatcccaagcagcagccatagaa 378
||||||||| || ||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 309 ggagaaggtccttgtggatgctgggtaccgcgaccccaagcagcagccatagaa 256
>gb|CA688042.1|CA688042 wlm96.pk037.o19 wlm96 Triticum aestivum cDNA clone wlm96.pk037.o19
5' end, mRNA sequence
Length = 497
Score = 182 bits (92), Expect = 2e-044
Identities = 231/276 (83%), Gaps = 1/276 (0%)
Strand = Plus / Minus
Query: 89 gtcgccact-gaggagtcccacaccgtcgaggagttcctgcaggctgccttcggctacgc 147
||||||||| || |||| ||||||||| ||||||||| |||||||||| || || || ||
Sbjct: 298 gtcgccacttgaagagtgccacaccgtggaggagttcttgcaggctgcttttgggtatgc 239
Query: 148 cggcctcagctggaaggatcacgtggtcattgacaagaagtacttccggcctgcagaagt 207
|||||||| |||||||||||| ||||||||||||||||||||||| || ||| | || ||
Sbjct: 238 cggcctcaactggaaggatcatgtggtcattgacaagaagtactttcgcccttcggaggt 179
Query: 208 cgacagcctcaagggggacgccaccaaggcgaggaaggtgctcaagtggaagcccaaggt 267
||| |||| |||| || | ||||| | |||| ||||| |||||||||||||||
Sbjct: 178 ggactgcctgcagggagattcatccaagtcaaggagagtgcttgggtggaagcccaaggt 119
Query: 268 tgggttccaggagctcgtggagatgatggtcgatcacgacattgagctcgccaagaagga 327
||| |||||| |||| || ||||||||||| ||| ||||||| ||||| |||||||||||
Sbjct: 118 tggcttccagcagctagttgagatgatggttgataacgacatcgagcttgccaagaagga 59
Query: 328 gaaggttctggtggatgctgggttccgtgatcccaa 363
|||||| || ||||||||||||| ||| || |||||
Sbjct: 58 gaaggtccttgtggatgctgggtaccgcgaccccaa 23
>gb|BJ255477.1|BJ255477 BJ255477 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23o21 3', mRNA sequence
Length = 357
Score = 155 bits (78), Expect = 4e-036
Identities = 114/126 (90%)
Strand = Plus / Minus
Query: 253 gtggaagcccaaggttgggttccaggagctcgtggagatgatggtcgatcacgacattga 312
|||||||||||||||||| |||||| |||| || ||||||||||| ||| ||||||| ||
Sbjct: 345 gtggaagcccaaggttggcttccagcagctggttgagatgatggttgataacgacatcga 286
Query: 313 gctcgccaagaaggagaaggttctggtggatgctgggttccgtgatcccaagcagcagcc 372
||||||||||||||||||||| || ||||||||||||| ||| || ||||||||||||||
Sbjct: 285 gctcgccaagaaggagaaggtccttgtggatgctgggtaccgcgaccccaagcagcagcc 226
Query: 373 atagaa 378
||||||
Sbjct: 225 atagaa 220
>gb|BJ299121.1|BJ299121 BJ299121 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl28m07 3', mRNA sequence
Length = 314
Score = 151 bits (76), Expect = 7e-035
Identities = 195/235 (82%)
Strand = Plus / Minus
Query: 116 gaggagttcctgcaggctgccttcggctacgccggcctcagctggaaggatcacgtggtc 175
||||||||| |||||||||| || || || |||||||||| |||||||||||| ||||||
Sbjct: 311 gaggagttcttgcaggctgcttttgggtatgccggcctcaactggaaggatcatgtggtc 252
Query: 176 attgacaagaagtacttccggcctgcagaagtcgacagcctcaagggggacgccaccaag 235
||||||||||||||||| || ||| | || || ||| |||| |||| || | |||||
Sbjct: 251 attgacaagaagtactttcgcccttcggaggtggactgcctgcagggagattcatccaag 192
Query: 236 gcgaggaaggtgctcaagtggaagcccaaggttgggttccaggagctcgtggagatgatg 295
| |||| ||||| |||||||||||||||||| |||||| |||| || |||||||||
Sbjct: 191 tcaaggagagtgcttgggtggaagcccaaggttggcttccagcagctagttgagatgatg 132
Query: 296 gtcgatcacgacattgagctcgccaagaaggagaaggttctggtggatgctgggt 350
|| ||| |||||| ||||| ||||||||||| ||||| || |||||||||||||
Sbjct: 131 gttgatagcgacatcgagcttgccaagaagganaaggtccttgtggatgctgggt 77
>gb|BJ292445.1|BJ292445 BJ292445 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl27m07 5', mRNA sequence
Length = 584
Score = 145 bits (73), Expect = 4e-033
Identities = 112/125 (89%)
Strand = Plus / Plus
Query: 253 gtggaagcccaaggttgggttccaggagctcgtggagatgatggtcgatcacgacattga 312
|||||||||||||||||| |||||| |||| || ||||||||||| ||| ||||||| ||
Sbjct: 241 gtggaagcccaaggttggcttccagcagctagttgagatgatggttgataacgacatcga 300
Query: 313 gctcgccaagaaggagaaggttctggtggatgctgggttccgtgatcccaagcagcagcc 372
||| ||||||||||||||||| || ||||||||||||| ||| || ||||||||||||||
Sbjct: 301 gcttgccaagaaggagaaggtccttgtggatgctgggtaccgcgaccccaagcagcagcc 360
Query: 373 ataga 377
|||||
Sbjct: 361 ataga 365
Score = 133 bits (67), Expect = 2e-029
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 41 gaggcaatgtggctcatgctgcagcaggaaca-gccgggggattacgtcgtcgccactga 99
||||| |||||||||||||| ||||||| ||| ||| | ||||| || |||||||||||
Sbjct: 26 gaggccatgtggctcatgctccagcaggnacaagcctgatgattatgttgtcgccactga 85
Query: 100 ggagtcccacaccgtcg-aggagttcctgcaggctgccttcggctacgccggcctcagct 158
|||| ||||||||| | |||||||| |||||||||| || || || |||||||||| ||
Sbjct: 86 agagtgccacaccgtggnaggagttcttgcaggctgcttttgggtatgccggcctcaact 145
Query: 159 ggaaggatcacgtggtcattgacaagaagtactt 192
|||||||||| |||||||||||||||||||||||
Sbjct: 146 ggaaggatcatgtggtcattgacaagaagtactt 179
>gb|BJ220822.1|BJ220822 BJ220822 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh21o06 3', mRNA sequence
Length = 680
Score = 145 bits (73), Expect = 4e-033
Identities = 112/125 (89%)
Strand = Plus / Minus
Query: 253 gtggaagcccaaggttgggttccaggagctcgtggagatgatggtcgatcacgacattga 312
|||||||||||||||||| |||||| |||| || ||||||||||| ||| ||||||| ||
Sbjct: 336 gtggaagcccaaggttggcttccagcagctagttgagatgatggttgataacgacatcga 277
Query: 313 gctcgccaagaaggagaaggttctggtggatgctgggttccgtgatcccaagcagcagcc 372
||| ||||||||||||||||| || ||||||||||||| ||| || ||||||||||||||
Sbjct: 276 gcttgccaagaaggagaaggtccttgtggatgctgggtaccgcgaccccaagcagcagcc 217
Query: 373 ataga 377
|||||
Sbjct: 216 ataga 212
>gb|CA681031.1|CA681031 wlm24.pk0022.g2 wlm24 Triticum aestivum cDNA clone wlm24.pk0022.g2
5' end, mRNA sequence
Length = 624
Score = 145 bits (73), Expect = 4e-033
Identities = 112/125 (89%)
Strand = Plus / Minus
Query: 253 gtggaagcccaaggttgggttccaggagctcgtggagatgatggtcgatcacgacattga 312
||||||||||||||| || |||||| |||| || ||||||||||| ||| ||||||| ||
Sbjct: 222 gtggaagcccaaggtcggcttccagcagctagttgagatgatggttgataacgacatcga 163
Query: 313 gctcgccaagaaggagaaggttctggtggatgctgggttccgtgatcccaagcagcagcc 372
||||||||||||||||||||| || ||||||||||||| ||| || ||||||||||||||
Sbjct: 162 gctcgccaagaaggagaaggtccttgtggatgctgggtaccgcgaccccaagcagcagcc 103
Query: 373 ataga 377
|||||
Sbjct: 102 ataga 98
>gb|CA681029.1|CA681029 wlm24.pk0022.g1 wlm24 Triticum aestivum cDNA clone wlm24.pk0022.g1
5' end, mRNA sequence
Length = 524
Score = 117 bits (59), Expect = 9e-025
Identities = 83/91 (91%)
Strand = Plus / Minus
Query: 287 gagatgatggtcgatcacgacattgagctcgccaagaaggagaaggttctggtggatgct 346
||||||||||| ||| ||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 188 gagatgatggttgataacgacatcgagctcgccaagaaggagaaggtccttgtggatgct 129
Query: 347 gggttccgtgatcccaagcagcagccataga 377
|||| ||| || |||||||||||||||||||
Sbjct: 128 gggtaccgcgaccccaagcagcagccataga 98
>gb|CA629557.1|CA629557 wle1n.pk0026.d11 wle1n Triticum aestivum cDNA clone
wle1n.pk0026.d11 5' end, mRNA sequence
Length = 511
Score = 109 bits (55), Expect = 2e-022
Identities = 103/118 (87%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 260 cccaaggttgggttccaggagctcgtggagatgatggtcgatcacgacattgagctcgcc 319
|||||||| || |||||| |||| || ||||||||||| ||| ||||||| |||||||||
Sbjct: 335 cccaaggtcggcttccagcagctagttgagatgatggttgataacgacatcgagctcgcc 276
Query: 320 aagaaggagaaggttctggtggatgctgggttccgtgatcccaagcagcagccataga 377
|||||||||||||| | ||||||||||||| ||| | |||||||||||||||||||
Sbjct: 275 aagaaggagaaggtcnttgtggatgctgggtaccgcg-ccccaagcagcagccataga 219
>gb|CA618933.1|CA618933 wl1n.pk0042.c2 wl1n Triticum aestivum cDNA clone wl1n.pk0042.c2 5'
end, mRNA sequence
Length = 608
Score = 79.8 bits (40), Expect = 2e-013
Identities = 49/51 (96%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 13 ggactgggggttcgcgggggactacgtcgaggcaatgtggctcatgctgca 63
||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 317 ggactgggggt-cgcgggggactacgtngaggcaatgtggctcatgctgca 366
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 170,149
Number of Sequences: 636343
Number of extensions: 170149
Number of successful extensions: 50499
Number of sequences better than 0.5: 20
Number of HSP's better than 0.5 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50453
Number of HSP's gapped (non-prelim): 34
length of query: 623
length of database: 367,240,239
effective HSP length: 19
effective length of query: 604
effective length of database: 355,149,722
effective search space: 214510432088
effective search space used: 214510432088
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)