BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2618988.2.1
(631 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD871872.1|CD871872 AZO2.119E06F010207 AZO2 Triticum aes... 242 2e-062
gb|CV759077.1|CV759077 FGAS053459 Triticum aestivum FGAS: L... 188 3e-046
gb|BJ275225.1|BJ275225 BJ275225 Y. Ogihara unpublished cDNA... 167 1e-039
gb|BJ277888.1|BJ277888 BJ277888 Y. Ogihara unpublished cDNA... 165 5e-039
gb|BJ277913.1|BJ277913 BJ277913 Y. Ogihara unpublished cDNA... 165 5e-039
gb|CA685253.1|CA685253 wlm96.pk029.f6 wlm96 Triticum aestiv... 131 6e-029
gb|CD937281.1|CD937281 OV.106I05F010202 OV Triticum aestivu... 125 4e-027
gb|BJ228434.1|BJ228434 BJ228434 Y. Ogihara unpublished cDNA... 117 1e-024
gb|CD918125.1|CD918125 G608.108B21F010907 G608 Triticum aes... 100 2e-019
gb|CA679716.1|CA679716 wlm4.pk0024.a2 wlm4 Triticum aestivu... 98 9e-019
gb|CD918696.1|CD918696 G608.110I07F010910 G608 Triticum aes... 90 2e-016
gb|CD885680.1|CD885680 G118.100B15R010921 G118 Triticum aes... 86 3e-015
gb|BQ247151.1|BQ247151 TaE15028G05R TaE15 Triticum aestivum... 84 1e-014
gb|CD902980.1|CD902980 G356.108L17F010918 G356 Triticum aes... 84 1e-014
gb|AL828739.1|AL828739 AL828739 p:739 Triticum aestivum cDN... 82 5e-014
gb|CD867509.1|CD867509 AZO2.106H18R010329 AZO2 Triticum aes... 78 8e-013
gb|BE425574.1|BE425574 WHE0317_H12_H12ZS Wheat unstressed s... 76 3e-012
gb|DR733077.1|DR733077 FGAS077332 Triticum aestivum FGAS: T... 76 3e-012
gb|BG905834.1|BG905834 TaLr1142G10F TaLr1 Triticum aestivum... 72 5e-011
gb|BU100894.1|BU100894 WHE3359_B07_C13ZS Chinese Spring alu... 72 5e-011
gb|CD895871.1|CD895871 G174.101C21F010821 G174 Triticum aes... 72 5e-011
gb|BE496865.1|BE496865 WHE0761_D01_H01ZS Wheat heat-stresse... 70 2e-010
gb|BQ753201.1|BQ753201 WHE4124_C05_F10ZS Wheat salt-stresse... 70 2e-010
gb|CA638832.1|CA638832 wre1n.pk0016.h9 wre1n Triticum aesti... 70 2e-010
gb|CD454260.1|CD454260 WHE1770_D02_H04ZT CS wheat pre-anthe... 70 2e-010
gb|BM137436.1|BM137436 WHE0475_B01_C01ZS Wheat Fusarium gra... 66 3e-009
gb|BQ802490.1|BQ802490 WHE2826_E05_I10ZS Triticum monococcu... 66 3e-009
gb|CV765798.1|CV765798 FGAS060185 Triticum aestivum FGAS: L... 66 3e-009
gb|BJ295748.1|BJ295748 BJ295748 Y. Ogihara unpublished cDNA... 64 1e-008
gb|BQ752889.1|BQ752889 WHE4120_D01_H02ZS Wheat salt-stresse... 64 1e-008
gb|CA721277.1|CA721277 wdk9n.pk001.e20 wdk9n Triticum aesti... 64 1e-008
gb|CD453688.1|CD453688 WHE0840_E04_J08ZT CS wheat vernalize... 64 1e-008
gb|BE418923.1|BE418923 WWR017.B11R000101 ITEC WWR Wheat Roo... 62 5e-008
gb|BQ578506.1|BQ578506 WHE0304_F06_L12ZS Wheat unstressed s... 62 5e-008
gb|BQ806639.1|BQ806639 WHE3581_D09_H17ZS Wheat developing g... 62 5e-008
gb|CA703125.1|CA703125 wdk1c.pk008.o13 wdk1c Triticum aesti... 62 5e-008
gb|CA741400.1|CA741400 wia1c.pk002.l7 wia1c Triticum aestiv... 62 5e-008
gb|CD490459.1|CD490459 WHE2904_F12_L24ZT CS wheat aluminum-... 62 5e-008
gb|CD922722.1|CD922722 G750.104K20F010529 G750 Triticum aes... 62 5e-008
gb|BE400071.1|BE400071 AWB010.C05F000328 ITEC AWB Wheat Mei... 60 2e-007
gb|CA625114.1|CA625114 wl1n.pk0123.c12 wl1n Triticum aestiv... 60 2e-007
gb|BE428856.1|BE428856 MTD011.F01F990617 ITEC MTD Durum Whe... 58 8e-007
gb|CA684971.1|CA684971 wlm96.pk028.k10 wlm96 Triticum aesti... 58 8e-007
gb|CA700543.1|CA700543 wkm1c.pk005.f10 wkm1c Triticum aesti... 58 8e-007
gb|CV761615.1|CV761615 FGAS056003 Triticum aestivum FGAS: L... 58 8e-007
gb|AJ874027.1|AJ874027 AJ874027 Triticum aestivum cv. Fidel... 58 8e-007
gb|BE425377.1|BE425377 WHE313_G03_G03ZS Wheat unstressed se... 56 3e-006
gb|BE425760.1|BE425760 WHE0316_C11_C11ZS Wheat unstressed s... 56 3e-006
gb|AL827736.1|AL827736 AL827736 p:638 Triticum aestivum cDN... 56 3e-006
gb|AL827737.1|AL827737 AL827737 p:638 Triticum aestivum cDN... 56 3e-006
gb|CA612266.1|CA612266 wr1.pk0139.e8 wr1 Triticum aestivum ... 56 3e-006
gb|CD882790.1|CD882790 F1.111D15F010430 F1 Triticum aestivu... 56 3e-006
gb|CK209010.1|CK209010 FGAS020743 Triticum aestivum FGAS: L... 56 3e-006
gb|CN012928.1|CN012928 WHE3954_F06_L12ZS Wheat Fusarium gra... 56 3e-006
gb|BQ483975.1|BQ483975 WHE3515_A05_B09ZS Wheat unstressed r... 54 1e-005
gb|CA700350.1|CA700350 wkm1c.pk005.e20 wkm1c Triticum aesti... 54 1e-005
gb|CA732032.1|CA732032 wlp1c.pk002.f17 wlp1c Triticum aesti... 54 1e-005
gb|CA732916.1|CA732916 wlp1c.pk006.g19 wlp1c Triticum aesti... 54 1e-005
gb|CD915387.1|CD915387 G550.125P10F010713 G550 Triticum aes... 54 1e-005
gb|CK211682.1|CK211682 FGAS023536 Triticum aestivum FGAS: L... 54 1e-005
gb|CK216261.1|CK216261 FGAS028248 Triticum aestivum FGAS: L... 54 1e-005
gb|CV773219.1|CV773219 FGAS067615 Triticum aestivum FGAS: L... 54 1e-005
gb|BF474053.1|BF474053 WHE0840_E04_J08ZS Wheat vernalized c... 52 5e-005
gb|BJ239537.1|BJ239537 BJ239537 Y. Ogihara unpublished cDNA... 52 5e-005
gb|AL824749.1|AL824749 AL824749 p:234 Triticum aestivum cDN... 52 5e-005
gb|CA711259.1|CA711259 wdk2c.pk018.m3 wdk2c Triticum aestiv... 52 5e-005
gb|CA714936.1|CA714936 wdk3c.pk022.k16 wdk3c Triticum aesti... 52 5e-005
gb|AJ717208.1|AJ717208 AJ717208 Triticum turgidum subsp. du... 52 5e-005
gb|CV764475.1|CV764475 FGAS058860 Triticum aestivum FGAS: L... 52 5e-005
gb|BE425526.1|BE425526 WHE0317_D03_D03ZS Wheat unstressed s... 50 2e-004
gb|BE428405.1|BE428405 MTD006.F09F990616 ITEC MTD Durum Whe... 50 2e-004
gb|CD926341.1|CD926341 G750.121L03F010711 G750 Triticum aes... 50 2e-004
gb|AL808279.1|AL808279 AL808279 a:22 Triticum aestivum cDNA... 50 2e-004
gb|CV765720.1|CV765720 FGAS060107 Triticum aestivum FGAS: L... 50 2e-004
gb|BG905373.1|BG905373 TaLr1139C08F TaLr1 Triticum aestivum... 48 7e-004
gb|BG908559.1|BG908559 TaLr1169D04F TaLr1 Triticum aestivum... 48 7e-004
gb|BQ803441.1|BQ803441 WHE2837_F11_K21ZS Triticum monococcu... 48 7e-004
gb|CA712533.1|CA712533 wdk3c.pk006.o10 wdk3c Triticum aesti... 48 7e-004
gb|CD922960.1|CD922960 G750.105M17F010531 G750 Triticum aes... 48 7e-004
gb|CK168486.1|CK168486 FGAS043018 Triticum aestivum FGAS: T... 48 7e-004
gb|CK211335.1|CK211335 FGAS023173 Triticum aestivum FGAS: L... 48 7e-004
gb|BE445694.1|BE445694 WHE1452_G06_M12ZS Wheat etiolated se... 46 0.003
gb|BE586089.1|BE586089 Est#8pT7_H03_h3_028 KSU wheat Fusari... 46 0.003
gb|BM134647.1|BM134647 WHE0451_E03_E03ZS Wheat Fusarium gra... 46 0.003
gb|BJ230352.1|BJ230352 BJ230352 Y. Ogihara unpublished cDNA... 46 0.003
gb|BJ313071.1|BJ313071 BJ313071 Y. Ogihara unpublished cDNA... 46 0.003
gb|BJ318808.1|BJ318808 BJ318808 Y. Ogihara unpublished cDNA... 46 0.003
gb|AL820408.1|AL820408 AL820408 N:130 Triticum aestivum cDN... 46 0.003
gb|AL824774.1|AL824774 AL824774 p:234 Triticum aestivum cDN... 46 0.003
gb|CA733540.1|CA733540 wlp1c.pk008.f19 wlp1c Triticum aesti... 46 0.003
gb|CD453031.1|CD453031 WHE1452_G06_M12ZT CS wheat etiolated... 46 0.003
gb|CD871509.1|CD871509 AZO2.118G11R010403 AZO2 Triticum aes... 46 0.003
gb|CK210889.1|CK210889 FGAS022716 Triticum aestivum FGAS: L... 46 0.003
emb|AJ438333.1|TAE438333 Triticum aestivum partial mRNA for... 46 0.003
emb|AJ438335.1|TAE438335 Triticum aestivum partial mRNA for... 46 0.003
gb|BE443274.1|BE443274 WHE1110_B09_C18ZS Wheat etiolated se... 44 0.011
gb|BF200526.1|BF200526 WHE0825-0828_D21_D21ZS Wheat vernali... 44 0.011
gb|BG906285.1|BG906285 TaLr1148B05F TaLr1 Triticum aestivum... 44 0.011
gb|BG908180.1|BG908180 TaLr1166B10F TaLr1 Triticum aestivum... 44 0.011
gb|BQ169201.1|BQ169201 WHE2162_E06_J12ZT Triticum turgidum ... 44 0.011
gb|AL825623.1|AL825623 AL825623 p:234 Triticum aestivum cDN... 44 0.011
gb|CA620385.1|CA620385 wl1n.pk0055.d12 wl1n Triticum aestiv... 44 0.011
gb|CA655993.1|CA655993 wlm0.pk0021.d10 wlm0 Triticum aestiv... 44 0.011
gb|CD453448.1|CD453448 WHE0752_C06_E12ZT CS wheat heat-stre... 44 0.011
gb|CD491370.1|CD491370 WHE3085_F05_L09ZT CS wheat cold-stre... 44 0.011
gb|CD873775.1|CD873775 AZO3.100K08F010925 AZO3 Triticum aes... 44 0.011
gb|DR432305.1|DR432305 441E-825 Line 441 epidermal library ... 44 0.011
gb|BT009372.1| Triticum aestivum clone wlm96.pk028.k4:fis, ... 44 0.011
gb|BJ281318.1|BJ281318 BJ281318 Y. Ogihara unpublished cDNA... 42 0.045
gb|BJ286382.1|BJ286382 BJ286382 Y. Ogihara unpublished cDNA... 42 0.045
gb|BQ483250.1|BQ483250 WHE3506_D01_G02ZS Wheat unstressed r... 42 0.045
gb|CA498640.1|CA498640 WHE3246_A01_A02ZT Wheat meiotic anth... 42 0.045
gb|CV760335.1|CV760335 FGAS054719 Triticum aestivum FGAS: L... 42 0.045
gb|BG313174.1|BG313174 WHE2054_F07_L14ZS Wheat salt-stresse... 40 0.18
gb|AL822298.1|AL822298 AL822298 p:234 Triticum aestivum cDN... 40 0.18
gb|BQ837969.1|BQ837969 WHE2905_A11_A21ZS Wheat aluminum-str... 40 0.18
gb|CD874269.1|CD874269 AZO3.101M04R011123 AZO3 Triticum aes... 40 0.18
gb|CD881956.1|CD881956 F1.104N12F010330 F1 Triticum aestivu... 40 0.18
gb|CD884678.1|CD884678 F1.117G10F010509 F1 Triticum aestivu... 40 0.18
gb|CD926713.1|CD926713 GR45.001N13R001013 GR45 Triticum aes... 40 0.18
gb|CD935623.1|CD935623 OV.101P23R010406 OV Triticum aestivu... 40 0.18
gb|CK205865.1|CK205865 FGAS017415 Triticum aestivum FGAS: L... 40 0.18
>gb|CD871872.1|CD871872 AZO2.119E06F010207 AZO2 Triticum aestivum cDNA clone AZO2119E06,
mRNA sequence
Length = 591
Score = 242 bits (122), Expect = 2e-062
Identities = 170/186 (91%)
Strand = Plus / Minus
Query: 357 gtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttgag 416
||||||||| ||||| ||| |||||||| || |||||||||||||||||||||||| ||
Sbjct: 221 gtcgtacccctccaccgccgcggccagccccagctccttctccaggaacacccggttcag 162
Query: 417 ccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccag 476
||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 161 ccgctgctccgcgtacagcggccacgccagcatcggcacgccggccatcaccgcctccag 102
Query: 477 gaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtc 536
||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||
Sbjct: 101 caccgagttccagccgcagtgcgtcacgaacccgcccaccgcgccgtgcgccagcacgtc 42
Query: 537 ccgctg 542
||||||
Sbjct: 41 ccgctg 36
Score = 69.9 bits (35), Expect = 2e-010
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 231 cagcgcgtccttggcctgccgcatggccgccagcgtgcgcttccggagcatcctcccgcc 290
|||||| ||||||||| || |||||| |||||||||||| |||||||| ||||||||
Sbjct: 347 cagcgcctccttggccctcctcatggcgcccagcgtgcgctcccggagcacgctcccgcc 288
Query: 291 atcggactccaagagccatcgcacctt 317
|||||||||| ||||| ||||||||
Sbjct: 287 gtcggactccatcagccaccgcacctt 261
>gb|CV759077.1|CV759077 FGAS053459 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 188 bits (95), Expect = 3e-046
Identities = 200/235 (85%)
Strand = Plus / Plus
Query: 397 tccaggaacacccggttgagccgctgctccgcgtagagcggccacgccaccatcggcacg 456
||||||||||| | ||| | ||||||||||||||| |||||||| ||| ||| ||||||
Sbjct: 134 tccaggaacactctgttcatccgctgctccgcgtacagcggccaggcccgcatgggcacg 193
Query: 457 cccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacg 516
|| ||||| |||||||| || || |||||||| |||||||| ||||| || ||||| |||
Sbjct: 194 ccggccatgaccgcctcgagcacggagttccacccgcagtgtgtcacaaaaccgccgacg 253
Query: 517 gacgcgtgcgccagcacgtcccgctgcggcgcccacgacctgaccacgagacccctatcc 576
| |||| ||||||||||| |||||||||||||| ||| |||| ||||| ||| | ||
Sbjct: 254 gcgccgtgagccagcacgtcgcgctgcggcgcccatgacttgacgacgaggcccgtgccc 313
Query: 577 ttggtccgggccaggaacccctccgggaggagcgcgtcaaggtccggctccggcg 631
||||||||| ||||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 314 ttggtccggtccaggaagccctccgggaggagagcgtcgaggtccggctccggcg 368
>gb|BJ275225.1|BJ275225 BJ275225 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh6j21 3', mRNA sequence
Length = 665
Score = 167 bits (84), Expect = 1e-039
Identities = 171/200 (85%)
Strand = Plus / Plus
Query: 356 tgtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttga 415
||||||||||||||| ||||||||||||||||||| ||| | ||| |||| | ||| |
Sbjct: 337 tgtcgtacccttccatggccacggccagctgcatcccctccaccaaaaacagcttgttca 396
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|| ||||| ||||| || |||||||||| |||||||||||||||||| ||||||||||
Sbjct: 397 tgcgttgctcggcgtatagaggccacgccagcatcggcacgcccgccatgaccgcctcca 456
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||| |||||||||||||| || ||||| || | |||||||||||||||
Sbjct: 457 tcaccgagttccatccgcagtgcgtcacaaacccgccgaccgcgccgtgcgccagcacgt 516
Query: 536 cccgctgcggcgcccacgac 555
|||||||||| |||||||||
Sbjct: 517 cccgctgcggtgcccacgac 536
Score = 44.1 bits (22), Expect = 0.011
Identities = 82/102 (80%)
Strand = Plus / Plus
Query: 231 cagcgcgtccttggcctgccgcatggccgccagcgtgcgcttccggagcatcctcccgcc 290
||||||||||||||| |||||||||||| |||| || | ||||||| || ||||||
Sbjct: 218 cagcgcgtccttggcaacccgcatggccgcgtgcgttcgttgccggagctcccgcccgcc 277
Query: 291 atcggactccaagagccatcgcaccttggcagcaacctcctc 332
|||||||| | ||||| | |||||||| || ||||||||
Sbjct: 278 gtcggactcgatcagccacctgaccttggcggccacctcctc 319
>gb|BJ277888.1|BJ277888 BJ277888 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13i18 5', mRNA sequence
Length = 583
Score = 165 bits (83), Expect = 5e-039
Identities = 110/119 (92%)
Strand = Plus / Minus
Query: 358 tcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttgagc 417
|||||||| ||||| ||| |||||||| || |||||||||||||||||||||||| |||
Sbjct: 135 tcgtacccctccaccgccgcggccagccccagctccttctccaggaacacccggttcagc 76
Query: 418 cgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccag 476
|||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 75 cgctgctccgcgtacagcggccacgccagcatcggcacgcccgccatcaccgcctccag 17
Score = 69.9 bits (35), Expect = 2e-010
Identities = 89/107 (83%)
Strand = Plus / Minus
Query: 211 tccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgcgc 270
|||||||| |||||||| | |||||| ||||||||| |||||| ||||||||||||
Sbjct: 276 tccgactccccgccctcgcccagcgcctccttggcccttgtcatggcggccagcgtgcgc 217
Query: 271 ttccggagcatcctcccgccatcggactccaagagccatcgcacctt 317
| |||||||| | |||||| |||||||||| ||||| ||||||||
Sbjct: 216 tcccggagcacgcgcccgccgtcggactccatcagccaccgcacctt 170
>gb|BJ277913.1|BJ277913 BJ277913 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13k14 5', mRNA sequence
Length = 445
Score = 165 bits (83), Expect = 5e-039
Identities = 110/119 (92%)
Strand = Plus / Minus
Query: 358 tcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttgagc 417
|||||||| ||||| ||| |||||||| || |||||||||||||||||||||||| |||
Sbjct: 124 tcgtacccctccaccgccgcggccagccccagctccttctccaggaacacccggttcagc 65
Query: 418 cgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccag 476
|||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 64 cgctgctccgcgtacagcggccacgccagcatcggcacgcccgccatcaccgcctccag 6
Score = 69.9 bits (35), Expect = 2e-010
Identities = 89/107 (83%)
Strand = Plus / Minus
Query: 211 tccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgcgc 270
|||||||| |||||||| | |||||| ||||||||| |||||| ||||||||||||
Sbjct: 265 tccgactccccgccctcgcccagcgcctccttggcccttgtcatggcggccagcgtgcgc 206
Query: 271 ttccggagcatcctcccgccatcggactccaagagccatcgcacctt 317
| |||||||| | |||||| |||||||||| ||||| ||||||||
Sbjct: 205 tcccggagcacgcgcccgccgtcggactccatcagccaccgcacctt 159
>gb|CA685253.1|CA685253 wlm96.pk029.f6 wlm96 Triticum aestivum cDNA clone wlm96.pk029.f6 5'
end, mRNA sequence
Length = 509
Score = 131 bits (66), Expect = 6e-029
Identities = 93/102 (91%)
Strand = Plus / Minus
Query: 358 tcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttgagc 417
|||||||| ||||| ||| |||||||| || |||||||||||||||||||||||| |||
Sbjct: 409 tcgtacccctccaccgccgcggccagccccagctccttctccaggaacacccggttcagc 350
Query: 418 cgctgctccgcgtagagcggccacgccaccatcggcacgccc 459
|||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 349 cgctgctccgcgtacagcggccacgccagcatcggcacgccc 308
>gb|CD937281.1|CD937281 OV.106I05F010202 OV Triticum aestivum cDNA clone OV106I05, mRNA
sequence
Length = 704
Score = 125 bits (63), Expect = 4e-027
Identities = 222/275 (80%)
Strand = Plus / Minus
Query: 357 gtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttgag 416
|||||||||||||| || |||||||||| |||||| ||||||||||||||| ||| |
Sbjct: 624 gtcgtacccttccatcgcgacggccagctccatctctttctccaggaacaccgcgttcat 565
Query: 417 ccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccag 476
| | ||||||||||| | |||||| |||| |||||||||||| ||||| |||| ||| ||
Sbjct: 564 cagttgctccgcgtacaacggccatgccaacatcggcacgcctgccatgaccgactcgag 505
Query: 477 gaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtc 536
||||||||||| || ||||| ||||| || | | |||| | |||| |||||||||||
Sbjct: 504 caccgagttccacccacagtgtgtcacaaaacagtccaccgcatcgtgggccagcacgtc 445
Query: 537 ccgctgcggcgcccacgacctgaccacgagacccctatccttggtccgggccaggaaccc 596
|| ||||||||||| || | || ||||| |||||| ||| |||||| | || || ||
Sbjct: 444 gcgttgcggcgcccatgatttcacaacgaggcccctaccctgggtccgttcaagaaaacc 385
Query: 597 ctccgggaggagcgcgtcaaggtccggctccggcg 631
|| |||||||| || || | ||||||||||||||
Sbjct: 384 ctgtgggaggagggcatccaagtccggctccggcg 350
>gb|BJ228434.1|BJ228434 BJ228434 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl6f11 3', mRNA sequence
Length = 695
Score = 117 bits (59), Expect = 1e-024
Identities = 140/167 (83%)
Strand = Plus / Plus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccagga 478
||||||| ||||| || |||||||||| ||||||||| |||||||| ||||||||||| |
Sbjct: 337 gctgctcggcgtacagaggccacgccagcatcggcacccccgccatgaccgcctccagca 396
Query: 479 ccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtccc 538
|||||||||| |||||||| |||||||| || |||| | ||||||||||||| ||
Sbjct: 397 ccgagttccatccgcagtgtgtcacgaacccagccaccgcgccgtgcgccagcactgcct 456
Query: 539 gctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| |||||| |||||||| |||| || || |||| ||||||||||||
Sbjct: 457 gttgcggcacccacgacatgacgaccagtgccctctccttggtccgg 503
>gb|CD918125.1|CD918125 G608.108B21F010907 G608 Triticum aestivum cDNA clone G608108B21,
mRNA sequence
Length = 685
Score = 99.6 bits (50), Expect = 2e-019
Identities = 80/90 (88%)
Strand = Plus / Minus
Query: 417 ccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccag 476
||||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||||
Sbjct: 327 ccgctgctccgcgtacagcggccacgccaccatcggcacgccggccgacacgctctccag 268
Query: 477 gaccgagttccagccgcagtgcgtcacgaa 506
||||||||||||||||||||| ||||||
Sbjct: 267 cgccgagttccagccgcagtgcgacacgaa 238
>gb|CA679716.1|CA679716 wlm4.pk0024.a2 wlm4 Triticum aestivum cDNA clone wlm4.pk0024.a2 5'
end, mRNA sequence
Length = 580
Score = 97.6 bits (49), Expect = 9e-019
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | ||||||||||||||| || |||| |||||||| ||||||||||||||||
Sbjct: 206 gcggccaagtcaccatcggcacgccggcgctcacggcctccagcaccgagttccagccgc 147
Query: 494 agtgcgtcacgaagccgccca 514
||||||||||||| |||||||
Sbjct: 146 agtgcgtcacgaacccgccca 126
>gb|CD918696.1|CD918696 G608.110I07F010910 G608 Triticum aestivum cDNA clone G608110I07,
mRNA sequence
Length = 683
Score = 89.7 bits (45), Expect = 2e-016
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 424 tccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgag 483
|||||||| ||||||| | ||||||||||||||| || |||| |||||||| || |||
Sbjct: 505 tccgcgtaccgcggccaagtcaccatcggcacgccggcgctcacggcctccagaacagag 446
Query: 484 ttccagccgcagtgcgtcacgaagccgcc 512
||||||||||||||||||||||| |||||
Sbjct: 445 ttccagccgcagtgcgtcacgaacccgcc 417
>gb|CD885680.1|CD885680 G118.100B15R010921 G118 Triticum aestivum cDNA clone G118100B15,
mRNA sequence
Length = 597
Score = 85.7 bits (43), Expect = 3e-015
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 436 ggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcag 495
||||||| || || |||||| ||||||||||||| ||||||||| |||||||| ||||||
Sbjct: 461 ggccacgtcagcaccggcacccccgccatcaccgtctccaggacggagttccacccgcag 520
Query: 496 tgcgtcacgaa 506
|||||||||||
Sbjct: 521 tgcgtcacgaa 531
>gb|BQ247151.1|BQ247151 TaE15028G05R TaE15 Triticum aestivum cDNA clone TaE15028G05R, mRNA
sequence
Length = 541
Score = 83.8 bits (42), Expect = 1e-014
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 417 ccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccag 476
||||||||||||||| |||||||||||||| ||||||||||| ||| | | ||||||
Sbjct: 341 ccgctgctccgcgtacagcggccacgccactatcggcacgccggccgacgcgctctccag 282
Query: 477 gaccgagttccagccgcagtgcgtcacgaa 506
||||||||||||||||||||| ||||||
Sbjct: 281 cgccgagttccagccgcagtgcgacacgaa 252
>gb|CD902980.1|CD902980 G356.108L17F010918 G356 Triticum aestivum cDNA clone G356108L17,
mRNA sequence
Length = 674
Score = 83.8 bits (42), Expect = 1e-014
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 417 ccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccag 476
||||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||||
Sbjct: 458 ccgctgctccgcgtacagcggccacgccaccatcggcacgccggccgacacgctctccag 399
Query: 477 gaccgagttccagccgcagtgcgtcacgaa 506
| ||||||||||| ||||||| ||||||
Sbjct: 398 tgcagagttccagccacagtgcgacacgaa 369
>gb|AL828739.1|AL828739 AL828739 p:739 Triticum aestivum cDNA clone G05_p739_plate_8, mRNA
sequence
Length = 516
Score = 81.8 bits (41), Expect = 5e-014
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 424 tccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgag 483
|||||||| ||||||| | ||| ||||||||||| || |||| |||||||| || |||
Sbjct: 496 tccgcgtaccgcggccaagtcacaatcggcacgccggcgctcacggcctccagaacagag 437
Query: 484 ttccagccgcagtgcgtcacgaagccgcc 512
||||||||||||||||||||||| |||||
Sbjct: 436 ttccagccgcagtgcgtcacgaacccgcc 408
>gb|CD867509.1|CD867509 AZO2.106H18R010329 AZO2 Triticum aestivum cDNA clone AZO2106H18,
mRNA sequence
Length = 705
Score = 77.8 bits (39), Expect = 8e-013
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 433 agcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccg 492
|||||||| | || || ||||||||||||| ||||| |||||| ||||||||||| |||
Sbjct: 530 agcggccatgtcagcaccggcacgcccgccgccaccgtctccagcaccgagttccacccg 589
Query: 493 cagtgcgtcacgaagccgcccac 515
|||||||||||||| |||||||
Sbjct: 590 cagtgcgtcacgaacgcgcccac 612
>gb|BE425574.1|BE425574 WHE0317_H12_H12ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0317_H12_H12, mRNA
sequence
Length = 438
Score = 75.8 bits (38), Expect = 3e-012
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 417 ccgctgctccgcgtagagcggccacgccaccatcggcacgcc 458
||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 45 ccgctgctccgcgtacagcggccacgccaccatcggcacgcc 4
>gb|DR733077.1|DR733077 FGAS077332 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1030
Score = 75.8 bits (38), Expect = 3e-012
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 450 cggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaag 507
||||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||
Sbjct: 467 cggcacgcccgccgccaccgtctccaggacggagttccatccgcagtgcgtcacgaag 524
>gb|BG905834.1|BG905834 TaLr1142G10F TaLr1 Triticum aestivum cDNA clone TaLr1142G10 3',
mRNA sequence
Length = 573
Score = 71.9 bits (36), Expect = 5e-011
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 451 ggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaa 506
||||| ||||||||||||| ||||||||| |||||||| || ||||||||||||||
Sbjct: 514 ggcacccccgccatcaccgtctccaggacggagttccacccacagtgcgtcacgaa 569
>gb|BU100894.1|BU100894 WHE3359_B07_C13ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3359_B07_C13,
mRNA sequence
Length = 575
Score = 71.9 bits (36), Expect = 5e-011
Identities = 114/140 (81%)
Strand = Plus / Minus
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|||||||||| ||| ||||||||||||| ||||| |||||||| || || |||||
Sbjct: 248 gccgctgctcggcgaagagcggccacgcgaccatgggcacgccgtgcaccaggctctcca 189
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||||| ||||||||| || ||||| ||| || | |||| |||||||| |
Sbjct: 188 ggaccgagttccacccgcagtgcaccaggaagcaccccgtggcctcgtgagccagcacct 129
Query: 536 cccgctgcggcgcccacgac 555
|| ||||||||||||||||
Sbjct: 128 ccgtctgcggcgcccacgac 109
>gb|CD895871.1|CD895871 G174.101C21F010821 G174 Triticum aestivum cDNA clone G174101C21,
mRNA sequence
Length = 619
Score = 71.9 bits (36), Expect = 5e-011
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 451 ggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaa 506
||||| ||||||||||||| ||||||||| |||||||| || ||||||||||||||
Sbjct: 285 ggcacccccgccatcaccgtctccaggacggagttccacccacagtgcgtcacgaa 230
>gb|BE496865.1|BE496865 WHE0761_D01_H01ZS Wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0761_D01_H01, mRNA
sequence
Length = 614
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcc 458
|||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 ctgctctgcgtagagcggccacgccaccatcggcacgcc 203
>gb|BQ753201.1|BQ753201 WHE4124_C05_F10ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4124_C05_F10, mRNA sequence
Length = 666
Score = 69.9 bits (35), Expect = 2e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||| |||| |||||||||||| || ||||||| || |||||||||
Sbjct: 245 ctccagcaccgagttccacccgccgtgcgtcacgaacccccccacggccgggtgcgccag 186
Query: 531 cacgtcccgctgcggcgcccacg 553
| ||| ||||||||||||||
Sbjct: 185 gatctccttctgcggcgcccacg 163
Score = 40.1 bits (20), Expect = 0.18
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacg 442
||||||||||||| ||||||||||
Sbjct: 297 gctgctccgcgtacagcggccacg 274
>gb|CA638832.1|CA638832 wre1n.pk0016.h9 wre1n Triticum aestivum cDNA clone wre1n.pk0016.h9
5' end, mRNA sequence
Length = 568
Score = 69.9 bits (35), Expect = 2e-010
Identities = 77/91 (84%)
Strand = Plus / Minus
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgggccaggaacccctc 599
|||||||||||| ||| |||||||||| || || |||||||||| ||| |||||| ||
Sbjct: 133 ctgcggcgcccaagacttgaccacgagccctctgtccttggtcctctccaagaacccttc 74
Query: 600 cgggaggagcgcgtcaaggtccggctccggc 630
||| | ||||||||| ||||| |||||||||
Sbjct: 73 cggcatgagcgcgtcgaggtcaggctccggc 43
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtca 502
|||||||||||||||||||||||
Sbjct: 193 cgagttccagccgcagtgcgtca 171
>gb|CD454260.1|CD454260 WHE1770_D02_H04ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1770_D02_H04, mRNA sequence
Length = 592
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcc 458
|||||| ||||||||||||||||||||||||||||||||
Sbjct: 424 ctgctctgcgtagagcggccacgccaccatcggcacgcc 462
>gb|BM137436.1|BM137436 WHE0475_B01_C01ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0475_B01_C01,
mRNA sequence
Length = 522
Score = 65.9 bits (33), Expect = 3e-009
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 422 gctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccg 481
||||||| || |||||||| || |||||||||||| ||| |||| ||||||| || |
Sbjct: 522 gctccgcatacagcggccagcacagcatcggcacgccggccgtcacgccctccagcacgg 463
Query: 482 agttccagccgcagtgcgtcacgaa 506
||||||| |||||||||||||||||
Sbjct: 462 agttccacccgcagtgcgtcacgaa 438
>gb|BQ802490.1|BQ802490 WHE2826_E05_I10ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2826_E05_I10, mRNA
sequence
Length = 714
Score = 65.9 bits (33), Expect = 3e-009
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 465 caccgcctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtg 524
||||||||||||| ||||||||| ||||||||||||||||||| |||| |||| |||
Sbjct: 224 caccgcctccagggtcgagttccacccgcagtgcgtcacgaagcacgccaccgacgggtg 165
Query: 525 cgccagcac 533
|| ||||||
Sbjct: 164 cgacagcac 156
>gb|CV765798.1|CV765798 FGAS060185 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 65.9 bits (33), Expect = 3e-009
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||| |||||||||||||| |||||||||| || | ||| | ||||||||| |
Sbjct: 262 ctgctcggcgtagagcggccagcataccatcggcagcccggacatgatcgcctccagcgc 203
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcc 512
||||||||| |||||||||||||||||| ||||
Sbjct: 202 cgagttccacccgcagtgcgtcacgaaggcgcc 170
>gb|BJ295748.1|BJ295748 BJ295748 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl5e11 3', mRNA sequence
Length = 729
Score = 63.9 bits (32), Expect = 1e-008
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| || ||||||||| |||||||| |||||||||||
Sbjct: 559 ctgctccgcgtacatcggccagcacagcatcggcacccccgccatgaccgcctccagcgt 618
Query: 480 cgagttccagccgcagtgcgtcac 503
|||||||| ||||||||||||||
Sbjct: 619 ggagttccacccgcagtgcgtcac 642
>gb|BQ752889.1|BQ752889 WHE4120_D01_H02ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4120_D01_H02, mRNA sequence
Length = 754
Score = 63.9 bits (32), Expect = 1e-008
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
|||||||||||||| |||||| | |||| ||||||| | || |||||||||||| |||
Sbjct: 450 cgagttccagccgctgtgcgtgaagaaggcgcccaccgccgggtgcgccagcacctcctc 391
Query: 540 ctgcggcgccca 551
||||||||||||
Sbjct: 390 ctgcggcgccca 379
>gb|CA721277.1|CA721277 wdk9n.pk001.e20 wdk9n Triticum aestivum cDNA clone wdk9n.pk001.e20
5' end, mRNA sequence
Length = 516
Score = 63.9 bits (32), Expect = 1e-008
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
|||||||||||||| |||||| | |||| ||||||| | || |||||||||||| |||
Sbjct: 416 cgagttccagccgctgtgcgtgaagaaggcgcccaccgccgggtgcgccagcacctcctc 475
Query: 540 ctgcggcgccca 551
||||||||||||
Sbjct: 476 ctgcggcgccca 487
>gb|CD453688.1|CD453688 WHE0840_E04_J08ZT CS wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0840_E04_J08, mRNA sequence
Length = 537
Score = 63.9 bits (32), Expect = 1e-008
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
|||||||||||||| |||||| | |||| ||||||| | || |||||||||||| |||
Sbjct: 416 cgagttccagccgctgtgcgtgaagaaggcgcccaccgccgggtgcgccagcacctcctc 475
Query: 540 ctgcggcgccca 551
||||||||||||
Sbjct: 476 ctgcggcgccca 487
>gb|BE418923.1|BE418923 WWR017.B11R000101 ITEC WWR Wheat Root Library Triticum aestivum
cDNA clone WWR017.B11, mRNA sequence
Length = 374
Score = 61.9 bits (31), Expect = 5e-008
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 208 gcctccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtg 267
||||| ||||| ||||||||||||| ||| || || ||||| |||||||||||| ||||
Sbjct: 125 gcctcagactccccgccctcacgcatcgcctcattcgcctgacgcatggccgcctgcgtc 66
Query: 268 cgcttccggagcatcctcccgcc 290
|||| |||| || |||||||||
Sbjct: 65 cgctcacggatcaccctcccgcc 43
>gb|BQ578506.1|BQ578506 WHE0304_F06_L12ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0304_F06_L12, mRNA
sequence
Length = 644
Score = 61.9 bits (31), Expect = 5e-008
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||| ||| |||||||||||| || ||||||| || |||||||||
Sbjct: 135 ctccagcaccgagttccacccggcgtgcgtcacgaacccccccacggccgggtgcgccag 76
Query: 531 cacgtcccgctgcggcgcccacg 553
| |||| ||||||| ||||||
Sbjct: 75 gatgtccttctgcggcacccacg 53
>gb|BQ806639.1|BQ806639 WHE3581_D09_H17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3581_D09_H17, mRNA sequence
Length = 552
Score = 61.9 bits (31), Expect = 5e-008
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|||||||||||||| |||| |||||||| |||||||||||||| || || |||||
Sbjct: 211 gccgctgctccgcgaagaggggccacgcgaccatcggcacgccgtgcaccaggctctcca 152
Query: 476 ggaccgagttccagccgcagtgc 498
| ||||||||||| |||||||||
Sbjct: 151 gcaccgagttccacccgcagtgc 129
>gb|CA703125.1|CA703125 wdk1c.pk008.o13 wdk1c Triticum aestivum cDNA clone wdk1c.pk008.o13
5' end, mRNA sequence
Length = 358
Score = 61.9 bits (31), Expect = 5e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 591 gaacccctccgggaggagcgcgtcaaggtccggctccgg 629
|||||||||||||||||||||||| ||||| ||||||||
Sbjct: 51 gaacccctccgggaggagcgcgtccaggtctggctccgg 13
Score = 54.0 bits (27), Expect = 1e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 421 tgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggacc 480
||||||||||| ||||||| || ||||||||| || ||| | |||| ||||||||
Sbjct: 221 tgctccgcgtactgcggccagcacagcatcggcaccccggccgacgccgcttccaggacg 162
Query: 481 gagttccagccgcagtgcgtcac 503
|||||||| ||||||||||||||
Sbjct: 161 gagttccacccgcagtgcgtcac 139
>gb|CA741400.1|CA741400 wia1c.pk002.l7 wia1c Triticum aestivum cDNA clone wia1c.pk002.l7 5'
end, mRNA sequence
Length = 498
Score = 61.9 bits (31), Expect = 5e-008
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgcc 462
|||||| ||||| | ||||||||||||||||||||||||||||
Sbjct: 80 ctgctcagcgtacaacggccacgccaccatcggcacgcccgcc 38
>gb|CD490459.1|CD490459 WHE2904_F12_L24ZT CS wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2904_F12_L24, mRNA
sequence
Length = 658
Score = 61.9 bits (31), Expect = 5e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
||||||||||||||||||||| |||| |||| |||| | |||| ||||| || ||| ||
Sbjct: 519 gagttccagccgcagtgcgtccagaaggcgccgacggcctcgtgggccaggacctccagc 578
Query: 541 tgcggcgccca 551
|||||||||||
Sbjct: 579 tgcggcgccca 589
>gb|CD922722.1|CD922722 G750.104K20F010529 G750 Triticum aestivum cDNA clone G750104K20,
mRNA sequence
Length = 488
Score = 61.9 bits (31), Expect = 5e-008
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 466 accgcctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgc 525
||||||||||| |||||||||||||||||||||||||||| |||| || ||||||
Sbjct: 481 accgcctccagcgtcgagttccagccgcagtgcgtcacgaaggcgccggtggcggcgtgc 422
Query: 526 gccagcacgtcccgctgcggcgcccac 552
|||||| ||| |||||||||||||
Sbjct: 421 cgcagcacctccgcctgcggcgcccac 395
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 591 gaacccctccgggaggagcgcgtcaaggtccggctccg 628
||||||||| |||||||||||||| ||||| |||||||
Sbjct: 356 gaacccctcggggaggagcgcgtccaggtctggctccg 319
>gb|BE400071.1|BE400071 AWB010.C05F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB010.C05, mRNA sequence
Length = 546
Score = 60.0 bits (30), Expect = 2e-007
Identities = 84/102 (82%)
Strand = Plus / Minus
Query: 402 gaacacccggttgagccgctgctccgcgtagagcggccacgccaccatcggcacgcccgc 461
||||||| ||| |||| |||||||||||| ||||||| || ||||||||| || ||
Sbjct: 201 gaacaccttgttcagcctctgctccgcgtactgcggccagcacagcatcggcaccccggc 142
Query: 462 catcaccgcctccaggaccgagttccagccgcagtgcgtcac 503
| | |||| |||||||| |||||||| ||||||||||||||
Sbjct: 141 cgacgccgcttccaggacggagttccacccgcagtgcgtcac 100
>gb|CA625114.1|CA625114 wl1n.pk0123.c12 wl1n Triticum aestivum cDNA clone wl1n.pk0123.c12
5' end, mRNA sequence
Length = 503
Score = 60.0 bits (30), Expect = 2e-007
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||| |||||| |||||||| || |||| |||||||| |||||||| ||||
Sbjct: 170 gcggccacgtcaccataggcacgccggcgctcacggcctccagcgtggagttccacccgc 111
Query: 494 agtgcgtcacgaagccgcccac 515
||||||| ||||| ||||||||
Sbjct: 110 agtgcgtgacgaacccgcccac 89
>gb|BE428856.1|BE428856 MTD011.F01F990617 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD011.F01, mRNA
sequence
Length = 402
Score = 58.0 bits (29), Expect = 8e-007
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 468 cgcctccaggaccgagttccagccgcagtgcgtcacgaagccgcc 512
||||||||| |||||||||| |||||||||||||||||| ||||
Sbjct: 238 cgcctccagcgccgagttccacccgcagtgcgtcacgaaggcgcc 194
>gb|CA684971.1|CA684971 wlm96.pk028.k10 wlm96 Triticum aestivum cDNA clone wlm96.pk028.k10
5' end, mRNA sequence
Length = 504
Score = 58.0 bits (29), Expect = 8e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 451 ggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagccg 510
||||||||||| ||||||||| ||||| |||||||| ||||| ||||||||||| ||
Sbjct: 172 ggcacgcccgcggccaccgcctctaggacggagttccacccgcactgcgtcacgaatgcg 113
Query: 511 cccac 515
|||||
Sbjct: 112 cccac 108
>gb|CA700543.1|CA700543 wkm1c.pk005.f10 wkm1c Triticum aestivum cDNA clone wkm1c.pk005.f10
5' end, mRNA sequence
Length = 511
Score = 58.0 bits (29), Expect = 8e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 451 ggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagccg 510
||||||||||| ||||||||| ||||| |||||||| ||||| ||||||||||| ||
Sbjct: 199 ggcacgcccgcggccaccgcctctaggacggagttccacccgcactgcgtcacgaatgcg 140
Query: 511 cccac 515
|||||
Sbjct: 139 cccac 135
>gb|CV761615.1|CV761615 FGAS056003 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 850
Score = 58.0 bits (29), Expect = 8e-007
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacg 520
||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 528 cgagttccacccgcagtgcgtcacgaagcaccccacggacg 488
>gb|AJ874027.1|AJ874027 AJ874027 Triticum aestivum cv. Fidel leaf Triticum aestivum cDNA
clone RB_327.1, mRNA sequence
Length = 354
Score = 58.0 bits (29), Expect = 8e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 451 ggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagccg 510
||||||||||| ||||||||| ||||| |||||||| ||||| ||||||||||| ||
Sbjct: 106 ggcacgcccgcggccaccgcctctaggacggagttccacccgcactgcgtcacgaatgcg 47
Query: 511 cccac 515
|||||
Sbjct: 46 cccac 42
>gb|BE425377.1|BE425377 WHE313_G03_G03ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE313_G03_G03, mRNA
sequence
Length = 572
Score = 56.0 bits (28), Expect = 3e-006
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||| ||| |||||||||||| || ||||||| || |||||||||
Sbjct: 62 ctccagcaccgagttccacccggcgtgcgtcacgaacccccccacggccgggtgcgccag 3
>gb|BE425760.1|BE425760 WHE0316_C11_C11ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0316_C11_C11, mRNA
sequence
Length = 372
Score = 56.0 bits (28), Expect = 3e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
|||||||||||||| |||||| | |||| ||||||| | || |||||||||||| |||
Sbjct: 181 cgagttccagccgctgtgcgtgaagaaggcgcccaccgccgggtgcgccagcacctcctc 122
Query: 540 ctgcggcgccca 551
|||||||||||
Sbjct: 121 ttgcggcgccca 110
>gb|AL827736.1|AL827736 AL827736 p:638 Triticum aestivum cDNA clone E08_p638_plate_15, mRNA
sequence
Length = 495
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacgga 518
|||||| |||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 191 ctccagcaccgagttccagccacagtgcgtgacgaacccccccacgga 144
>gb|AL827737.1|AL827737 AL827737 p:638 Triticum aestivum cDNA clone E09_p638_plate_15, mRNA
sequence
Length = 514
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacgga 518
|||||| |||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 191 ctccagcaccgagttccagccacagtgcgtgacgaacccccccacgga 144
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 173,446
Number of Sequences: 636343
Number of extensions: 173446
Number of successful extensions: 48796
Number of sequences better than 0.5: 123
Number of HSP's better than 0.5 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48568
Number of HSP's gapped (non-prelim): 215
length of query: 631
length of database: 367,240,239
effective HSP length: 19
effective length of query: 612
effective length of database: 355,149,722
effective search space: 217351629864
effective search space used: 217351629864
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)