BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591248.2.1
(1222 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE489184.1|BE489184 WHE1075_G06_M11ZS Wheat unstressed s... 385 e-105
gb|BQ841659.1|BQ841659 WHE2983_F03_K05ZS Wheat dormant embr... 369 e-100
gb|CV774254.1|CV774254 FGAS068652 Triticum aestivum FGAS: L... 361 7e-098
gb|AL820205.1|AL820205 AL820205 N:130 Triticum aestivum cDN... 281 6e-074
gb|CV763861.1|CV763861 FGAS058244 Triticum aestivum FGAS: L... 252 5e-065
gb|BQ245567.1|BQ245567 TaE15023A05R TaE15 Triticum aestivum... 168 6e-040
gb|BQ806910.1|BQ806910 WHE3584_E10_I20ZS Wheat developing g... 168 6e-040
gb|CD899159.1|CD899159 G174.111F15F010824 G174 Triticum aes... 161 1e-037
gb|CD899523.1|CD899523 G174.112K24F010824 G174 Triticum aes... 159 6e-037
gb|BQ246704.1|BQ246704 TaE15006G04R TaE15 Triticum aestivum... 153 3e-035
gb|AL812076.1|AL812076 AL812076 e:310 Triticum aestivum cDN... 151 1e-034
gb|BF473330.1|BF473330 WHE0923_C03_F05ZS Wheat 5-15 DAP spi... 145 8e-033
gb|BQ243798.1|BQ243798 TaE15008G07F TaE15 Triticum aestivum... 145 8e-033
gb|BQ246543.1|BQ246543 TaE15008G07R TaE15 Triticum aestivum... 145 8e-033
gb|CD899215.1|CD899215 G174.111J02F010827 G174 Triticum aes... 133 3e-029
gb|BJ249628.1|BJ249628 BJ249628 Y. Ogihara unpublished cDNA... 119 5e-025
gb|BJ243564.2|BJ243564 BJ243564 Y. Ogihara unpublished cDNA... 119 5e-025
gb|BE398846.1|BE398846 WHE0027.A04F990514 ITEC WHE Wheat En... 107 2e-021
gb|BM135004.1|BM135004 WHE0460_G07_M13ZS Wheat Fusarium gra... 84 3e-014
gb|BE414305.1|BE414305 SCU008.C06.R990714 ITEC SCU Wheat En... 76 6e-012
gb|CD932094.1|CD932094 GR45.116N13F010420 GR45 Triticum aes... 76 6e-012
gb|BJ244688.1|BJ244688 BJ244688 Y. Ogihara unpublished cDNA... 74 3e-011
gb|BQ606823.1|BQ606823 BRY_2698 wheat EST endosperm library... 70 4e-010
gb|BJ249314.1|BJ249314 BJ249314 Y. Ogihara unpublished cDNA... 66 6e-009
gb|CA701904.1|CA701904 wkm2c.pk005.p21 wkm2c Triticum aesti... 64 2e-008
gb|CN008704.1|CN008704 WHE2644_B09_D18ZE Wheat Fusarium gra... 64 2e-008
gb|BE443671.1|BE443671 WHE1121_F03_K05ZS Wheat etiolated se... 60 4e-007
gb|BQ169564.1|BQ169564 WHE0954_E10_J20ZT Wheat pre-anthesis... 60 4e-007
gb|CD452713.1|CD452713 WHE1121_F03_K05ZT CS wheat etiolated... 52 9e-005
gb|BJ243270.1|BJ243270 BJ243270 Y. Ogihara unpublished cDNA... 48 0.001
gb|CA710781.1|CA710781 wdk2c.pk016.f22 wdk2c Triticum aesti... 48 0.001
gb|CK207150.1|CK207150 FGAS018767 Triticum aestivum FGAS: L... 48 0.001
gb|AL815068.1|AL815068 AL815068 h:116 Triticum aestivum cDN... 48 0.001
gb|BQ247074.1|BQ247074 TaE15001F10R TaE15 Triticum aestivum... 46 0.006
gb|CK214959.1|CK214959 FGAS026903 Triticum aestivum FGAS: L... 46 0.006
gb|BF485200.1|BF485200 WHE1789_E12_J23ZS Wheat pre-anthesis... 44 0.023
gb|BQ244648.1|BQ244648 TaE15039F04R TaE15 Triticum aestivum... 44 0.023
gb|CD895962.1|CD895962 G174.101H08F010821 G174 Triticum aes... 44 0.023
gb|CD898898.1|CD898898 G174.110G24F010822 G174 Triticum aes... 44 0.023
gb|AL812239.1|AL812239 AL812239 e:310 Triticum aestivum cDN... 44 0.023
gb|AL812398.1|AL812398 AL812398 e:310 Triticum aestivum cDN... 44 0.023
gb|AL814675.1|AL814675 AL814675 h:116 Triticum aestivum cDN... 44 0.023
gb|BF199753.1|BF199753 WHE0591-0594_P18_P18ZE Triticum mono... 42 0.089
gb|BE398979.1|BE398979 WHE0028.H04F990514 ITEC WHE Wheat En... 40 0.35
gb|BE430054.1|BE430054 TAS006.E11R990624 ITEC TAS Wheat cDN... 40 0.35
gb|AL822123.1|AL822123 AL822123 p:234 Triticum aestivum cDN... 40 0.35
gb|AL822465.1|AL822465 AL822465 p:234 Triticum aestivum cDN... 40 0.35
gb|AL824903.1|AL824903 AL824903 p:234 Triticum aestivum cDN... 40 0.35
gb|AL825615.1|AL825615 AL825615 p:234 Triticum aestivum cDN... 40 0.35
gb|AL827375.1|AL827375 AL827375 p:638 Triticum aestivum cDN... 40 0.35
gb|CA598482.1|CA598482 wyr1c.pk005.a15 wyr1c Triticum aesti... 40 0.35
gb|CA598691.1|CA598691 wyr1c.pk002.j1 wyr1c Triticum aestiv... 40 0.35
gb|CA598895.1|CA598895 wyr1c.pk003.p22 wyr1c Triticum aesti... 40 0.35
gb|CD886100.1|CD886100 G118.101G03F010601 G118 Triticum aes... 40 0.35
gb|CD887919.1|CD887919 G118.106J19F010606 G118 Triticum aes... 40 0.35
gb|CD887920.1|CD887920 G118.106J19R010925 G118 Triticum aes... 40 0.35
gb|CD888656.1|CD888656 G118.108M21F010607 G118 Triticum aes... 40 0.35
gb|CD889661.1|CD889661 G118.112J17F010723 G118 Triticum aes... 40 0.35
gb|CD891638.1|CD891638 G118.117P07F010724 G118 Triticum aes... 40 0.35
gb|CD892064.1|CD892064 G118.119L05F010724 G118 Triticum aes... 40 0.35
gb|CD892307.1|CD892307 G118.120I22F010725 G118 Triticum aes... 40 0.35
gb|CD893717.1|CD893717 G118.124F22F010828 G118 Triticum aes... 40 0.35
gb|CD899668.1|CD899668 G174.113D03F010827 G174 Triticum aes... 40 0.35
gb|CD900167.1|CD900167 G174.114K19F010824 G174 Triticum aes... 40 0.35
gb|CD900168.1|CD900168 G174.114K19R011121 G174 Triticum aes... 40 0.35
gb|CD928225.1|CD928225 GR45.104F03F010316 GR45 Triticum aes... 40 0.35
gb|CD928323.1|CD928323 GR45.104J05F010316 GR45 Triticum aes... 40 0.35
gb|CD928737.1|CD928737 GR45.105M20F010316 GR45 Triticum aes... 40 0.35
gb|CD928960.1|CD928960 GR45.106I19F010319 GR45 Triticum aes... 40 0.35
gb|CD929265.1|CD929265 GR45.107J08F010319 GR45 Triticum aes... 40 0.35
gb|CD929619.1|CD929619 GR45.108K23F010413 GR45 Triticum aes... 40 0.35
gb|CD930156.1|CD930156 GR45.110F23F010418 GR45 Triticum aes... 40 0.35
gb|CD930157.1|CD930157 GR45.110F23F010511 GR45 Triticum aes... 40 0.35
gb|CD930558.1|CD930558 GR45.111K20F010418 GR45 Triticum aes... 40 0.35
gb|CD930826.1|CD930826 GR45.112I01F010418 GR45 Triticum aes... 40 0.35
gb|CD931041.1|CD931041 GR45.113E15F010418 GR45 Triticum aes... 40 0.35
gb|CD932603.1|CD932603 GR45.118I05F010718 GR45 Triticum aes... 40 0.35
gb|CD932702.1|CD932702 GR45.118M12F010718 GR45 Triticum aes... 40 0.35
gb|CD933425.1|CD933425 GR45.120P10F010719 GR45 Triticum aes... 40 0.35
gb|CD933426.1|CD933426 GR45.120P10R010831 GR45 Triticum aes... 40 0.35
gb|CD933454.1|CD933454 GR45.121A12F010719 GR45 Triticum aes... 40 0.35
gb|CD935631.1|CD935631 OV.102A11F010202 OV Triticum aestivu... 40 0.35
gb|CD936286.1|CD936286 OV.104F04F010202 OV Triticum aestivu... 40 0.35
gb|CD937734.1|CD937734 OV.107P06F010206 OV Triticum aestivu... 40 0.35
gb|CD938238.1|CD938238 OV.109H15F010309 OV Triticum aestivu... 40 0.35
gb|CD938803.1|CD938803 OV.111B03F010323 OV Triticum aestivu... 40 0.35
gb|CD939485.1|CD939485 OV.113M07F010309 OV Triticum aestivu... 40 0.35
gb|CV759148.1|CV759148 FGAS053530 Triticum aestivum FGAS: L... 40 0.35
emb|AJ784896.1| Triticum aestivum mRNA for type 1 non-speci... 40 0.35
emb|AJ852542.1| Triticum aestivum ltp9.3f gene for type 1 n... 40 0.35
>gb|BE489184.1|BE489184 WHE1075_G06_M11ZS Wheat unstressed seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE1075_G06_M11,
mRNA sequence
Length = 394
Score = 385 bits (194), Expect = e-105
Identities = 339/385 (88%), Gaps = 3/385 (0%)
Strand = Plus / Minus
Query: 375 gcgcgcgcgtcggggaaggcgtcggagtcgtcggtgggcccgcccacgacggcgcccacg 434
||||||||||||||||||||||||| | ||||| |||||||||| ||||||||||||||
Sbjct: 394 gcgcgcgcgtcggggaaggcgtcggtggcgtcgctgggcccgccgacgacggcgcccacc 335
Query: 435 agcaggttcgggttgggcgccgggctggtgtagtaggcggcgccggccttgcagccgatc 494
|||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 334 agcaggttcgggttgggcgccgcgctggcgtagtaggcggcgccggccttgcacccgatc 275
Query: 495 cgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggatccgccgcggg 554
| |||||||||||||||||||||||| | |||||| |||||||||||||||| ||||||
Sbjct: 274 ctcgccgggtgcgccgccacggacgggatggagctgccgcggtggtggatccggcgcggg 215
Query: 555 aaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcccagtatgtag 614
||||||| |||||| || |||||||| ||||| |||||||||||||| || || ||||||
Sbjct: 214 aaccgcgggccgtagccgaccatgtaggacatgcgcagcgggttgtccccgaggatgtag 155
Query: 615 tccacctgccgcttggccacgcggcggagctgcaccggcgacgccgac--gac-gagccg 671
|||||||||||||| ||||| | ||||||| | ||||| ||| ||| | | | ||||
Sbjct: 154 tccacctgccgcttagccacctgccggagcttcgtcggcggcgcggacctgccggcgccg 95
Query: 672 cacgagacgcgcccgccggcgtggctcaggtagttggagtaggccagcaggaggaacgac 731
|| |||||| || |||| ||||||||||||||||||||||||||||| | |||||| ||
Sbjct: 94 caggagacgtgcgcgcccgcgtggctcaggtagttggagtaggccaggatgaggaaggag 35
Query: 732 agctgcgtcacgtgctgcatgttgc 756
||| ||||||||||||||||||||
Sbjct: 34 agcgacgtcacgtgctgcatgttgc 10
>gb|BQ841659.1|BQ841659 WHE2983_F03_K05ZS Wheat dormant embryo cDNA library Triticum aestivum
cDNA clone WHE2983_F03_K05, mRNA sequence
Length = 560
Score = 369 bits (186), Expect = e-100
Identities = 339/390 (86%)
Strand = Plus / Minus
Query: 618 acctgccgcttggccacgcggcggagctgcaccggcgacgccgacgacgagccgcacgag 677
||||| |||||||| |||||||||||| |||||||| || || || ||||||||
Sbjct: 404 acctggcgcttggcgacgcggcggagcacgaccggcgaggcggaggagccgccgcacggc 345
Query: 678 acgcgcccgccggcgtggctcaggtagttggagtaggccagcaggaggaacgacagctgc 737
|| ||| || ||||||||| |||||||| |||||| ||||| |||||||||||| |
Sbjct: 344 acccgcacgttggcgtggctggcgtagttggcgtaggcgagcagcaggaacgacagcgac 285
Query: 738 gtcacgtgctgcatgttgctgctcccgaccttgaacagcagcccgcctggggagtactgg 797
||||||||||||||||||||| | || ||||||||||| || || ||||||||||||| |
Sbjct: 284 gtcacgtgctgcatgttgctgttgcccaccttgaacagaaggccacctggggagtactcg 225
Query: 798 atctgggggtgattggagatgccggggaggagggtgcacatgaagttgtcggcgttgaca 857
||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct: 224 atctgggggtgattggagatgccggggaggagggtacagatgaagttgtcggcgttcacc 165
Query: 858 cggaaggactggaagtactcgtccttccccatcagaacctcctttgagatgaggacgttg 917
|||| |||| |||| | |||||| |||||||| |||||||| |||||||||| ||||
Sbjct: 164 tggaacgacttgaagaaggagtccttgcccatcagcacctccttggagatgaggatgttg 105
Query: 918 atgccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgccgagcacc 977
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 104 atgccggcgtgcttgttgtcccagccgaactcgttgatggagtcgctggcgccgagcgcc 45
Query: 978 acctcgttcctcttgatgtactcgcggtac 1007
||||||||| |||||||||| |||||||||
Sbjct: 44 acctcgttcttcttgatgtagtcgcggtac 15
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 570 cccaccatgtacgacatccgcagcgggttgtcgcccagtatgtagtccacctg 622
||||||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 560 cccaccatgtacgacatgcgcagcgggttgtcgccaaggatgtagtccacctg 508
>gb|CV774254.1|CV774254 FGAS068652 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 850
Score = 361 bits (182), Expect = 7e-098
Identities = 300/338 (88%), Gaps = 4/338 (1%)
Strand = Plus / Minus
Query: 885 cccatcagaacctcctttgagatgaggacgttgatgccggcgtgcttgttgtcccagccg 944
|||||||| |||||||| |||||||||| |||||||||||||||||||| |||||||||
Sbjct: 507 cccatcagcacctccttggagatgaggatgttgatgccggcgtgcttgtgntcccagccg 448
Query: 945 aactcgttgatggc-gtcgctggcgccgagcaccacctcgttcctcttgatgtactcgcg 1003
||||||| ||||| |||||||||||||||| ||||||||||| |||||||||| |||||
Sbjct: 447 aactcgt-gatgggagtcgctggcgccgagcgccacctcgttcttcttgatgtagtcgcg 389
Query: 1004 gtactcccgccgccgcgtcgccttgtgcagccacgccnnnnnnnncacagcagctcgtcc 1063
|||| ||||| | |||| ||||||||||||||||||| |||||||||||||||
Sbjct: 388 gtacacccgctggcgcgacgccttgtgcagccacgccgccccc--cacagcagctcgtcc 331
Query: 1064 tggtatccggagtagtcgcagtagcaggggcacaccgccgcgtggaggctgctgctgtag 1123
||||| ||| ||||||||||||||| ||||||||||||| || ||||||||||||||
Sbjct: 330 tggtacccgtcgtagtcgcagtagcacgggcacaccgccgagtacaggctgctgctgtac 271
Query: 1124 gggccccggtacttgtccgcgaactcgaacacggcgacggcgcggtcgaggaggcgcttg 1183
| || |||||||||||||||||||| ||||||| || |||||||||||| |||||||||
Sbjct: 270 gccccgcggtacttgtccgcgaactcaaacacggagatggcgcggtcgagcaggcgcttg 211
Query: 1184 gagtaggcggggtcggcgtcgcggaagacgatggagcc 1221
||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gagtaggcggggtcggcgtcgcggaagacgatggagcc 173
Score = 168 bits (85), Expect = 6e-040
Identities = 121/132 (91%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 717 agcaggaggaacgacagctgcgtcacgtgctgcatgttgctgctcccgaccttgaacagc 776
|||||||||||||||||| |||||||||||||||||||||| || ||||||||||||
Sbjct: 674 agcaggaggaacgacagcgacgtcacgtgctgcatgttgctgtggcc-accttgaacagc 616
Query: 777 agcccgcctggggagtactggatctgggggtgattggagatgccggggaggagggtgcac 836
||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 615 agcccacctggggagtactcgatctgggggtggttggagatgccggggaggagggtgcag 556
Query: 837 atgaagttgtcg 848
||||||| ||||
Sbjct: 555 atgaagtngtcg 544
Score = 69.9 bits (35), Expect = 4e-010
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 583 acatccgcagcgggttgtcgccc-agtatgtagtccacctgccgcttggccacgcggcgg 641
|||| |||||||||| ||| ||| || ||||||||||||||||||||||| |||||||||
Sbjct: 813 acatgcgcagcgggtggtccccccaggatgtagtccacctgccgcttggcgacgcggcgg 754
Query: 642 agc 644
|||
Sbjct: 753 agc 751
>gb|AL820205.1|AL820205 AL820205 N:130 Triticum aestivum cDNA clone G04_N130_plate_21, mRNA
sequence
Length = 626
Score = 281 bits (142), Expect = 6e-074
Identities = 238/271 (87%), Gaps = 2/271 (0%)
Strand = Plus / Minus
Query: 951 ttgatggcgtcgctggcgccgagcaccacctcgttcctcttgatgtactcgcggtactcc 1010
||||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||| |
Sbjct: 626 ttgatggagtcgctggcgccgagcgccacctcgttcttcttgatgtagtcgcggtacacg 567
Query: 1011 cgccgccgcgtcgccttgtgcagccacgccnnnnnnnncacagcagctcgtcctggtatc 1070
||| | |||| ||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 566 cgctggcgcgacgccttgtgcagccacgccgccccg--cacagcagctcgtcctggtacc 509
Query: 1071 cggagtagtcgcagtagcaggggcacaccgccgcgtggaggctgctgctgtaggggcccc 1130
|| ||||||||||||||||||||||||||||| || |||||||||||||| | || |
Sbjct: 508 cgtcgtagtcgcagtagcaggggcacaccgccgagtacaggctgctgctgtacgccccac 449
Query: 1131 ggtacttgtccgcgaactcgaacacggcgacggcgcggtcgaggaggcgcttggagtagg 1190
||||||||||||||||||| ||||||| || |||||||||||| ||||||||||||||||
Sbjct: 448 ggtacttgtccgcgaactcaaacacggagatggcgcggtcgagcaggcgcttggagtagg 389
Query: 1191 cggggtcggcgtcgcggaagacgatggagcc 1221
| |||||||| ||||||||||||||||||||
Sbjct: 388 ccgggtcggcctcgcggaagacgatggagcc 358
>gb|CV763861.1|CV763861 FGAS058244 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 819
Score = 252 bits (127), Expect = 5e-065
Identities = 255/297 (85%), Gaps = 4/297 (1%)
Strand = Plus / Minus
Query: 925 cgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgccgagcaccacctcgt 984
|||| ||||||||||||| ||||||||||| || ||||||| |||||||| |||||||||
Sbjct: 816 cgtgtttgttgtcccagcggaactcgttgagggagtcgctgccgccgagcgccacctcgt 757
Query: 985 tcctcttgatgtactcgcggtactcccgccgccgcgtcgccttgtgcagccacgccnnnn 1044
|| ||| |||||| ||||||||| | ||| |||||| ||||| ||||||||||||
Sbjct: 756 tcttct-gatgtagtcgcggtacacgcgctgccgcgacgcct-gtgcagccacgc--gcc 701
Query: 1045 nnnncacagcagctcgtcctggtatccggagtagtcgcagtagcaggggcacaccgccgc 1104
|||||||| ||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 700 cccccacagcagtnngtcctggtacccgtcgtagtcgcagtagcaggggcacaccgccga 641
Query: 1105 gtggaggctgctgctgtaggggccccggtacttgtccgcgaactcgaacacggcgacggc 1164
|| |||||||||||||| | || |||||||||||||||||||| ||||||| || |||
Sbjct: 640 gtacaggctgctgctgtacgccccacggtacttgtccgcgaactcaaacacggagatggc 581
Query: 1165 gcggtcgaggaggcgcttggagtaggcggggtcggcgtcgcggaagacgatggagcc 1221
||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 580 gcggtcgagcaggcgcttggagtaggccgggtcggcctcgcggaagacgatggagcc 524
>gb|BQ245567.1|BQ245567 TaE15023A05R TaE15 Triticum aestivum cDNA clone TaE15023A05R, mRNA
sequence
Length = 614
Score = 168 bits (85), Expect = 6e-040
Identities = 133/149 (89%)
Strand = Plus / Minus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggat 544
||||||||| |||||||||||||| ||||||||||||| |||| || | |||||||||
Sbjct: 546 gcagccgatgcgcgccgggtgcgcggccacggacggcatcgaggacgccctgtggtggat 487
Query: 545 ccgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcc 604
|| | ||||| | ||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 486 cctctgcgggtagcgcgcgccgtagcccaccatgtacgacatccccagcgggttgtcgcc 427
Query: 605 cagtatgtagtccacctgccgcttggcca 633
||| | |||||||||||||||||||||||
Sbjct: 426 cagcacgtagtccacctgccgcttggcca 398
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 101 ccggcgagcttgttgtcccagctgaacacgtcgacgtcgtcgttggcgcc 52
>gb|BQ806910.1|BQ806910 WHE3584_E10_I20ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3584_E10_I20, mRNA sequence
Length = 597
Score = 168 bits (85), Expect = 6e-040
Identities = 133/149 (89%)
Strand = Plus / Minus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggat 544
||||||||| |||||||||||||| ||||||||||||| |||| || | |||||||||
Sbjct: 389 gcagccgatgcgcgccgggtgcgcggccacggacggcatcgaggacgccctgtggtggat 330
Query: 545 ccgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcc 604
|| | ||||| | ||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 329 cctctgcgggtagcgcgcgccgtagcccaccatgtacgacatccccagcgggttgtcgcc 270
Query: 605 cagtatgtagtccacctgccgcttggcca 633
||| | |||||||||||||||||||||||
Sbjct: 269 cagcacgtagtccacctgccgcttggcca 241
>gb|CD899159.1|CD899159 G174.111F15F010824 G174 Triticum aestivum cDNA clone G174111F15,
mRNA sequence
Length = 566
Score = 161 bits (81), Expect = 1e-037
Identities = 132/149 (88%)
Strand = Plus / Minus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggat 544
||||||||| |||||||||||||| ||| ||||||||| |||| || | |||||||||
Sbjct: 475 gcagccgatgcgcgccgggtgcgcggccccggacggcatcgaggacgccctgtggtggat 416
Query: 545 ccgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcc 604
|| | ||||| | ||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 415 cctctgcgggtagcgcgcgccgtagcccaccatgtacgacatccccagcgggttgtcgcc 356
Query: 605 cagtatgtagtccacctgccgcttggcca 633
||| | |||||||||||||||||||||||
Sbjct: 355 cagcacgtagtccacctgccgcttggcca 327
>gb|CD899523.1|CD899523 G174.112K24F010824 G174 Triticum aestivum cDNA clone G174112K24,
mRNA sequence
Length = 552
Score = 159 bits (80), Expect = 6e-037
Identities = 131/148 (88%)
Strand = Plus / Minus
Query: 486 cagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggatc 545
|||||||| |||||||||||||| |||||||||||| |||| || | ||||||||||
Sbjct: 548 cagccgatgcgcgccgggtgcgcgtccacggacggcatcgaggacgccctgtggtggatc 489
Query: 546 cgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgccc 605
| | ||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 488 ctctgcgggtagcgcgcgccgtagcccaccatgtacgacatccccagcgggttgtcgccc 429
Query: 606 agtatgtagtccacctgccgcttggcca 633
|| | |||||||||||||||||||||||
Sbjct: 428 agcacgtagtccacctgccgcttggcca 401
Score = 50.1 bits (25), Expect = 4e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgccgag 973
|||||| ||||||||||||||| |||| ||| || | ||||| ||||||||||
Sbjct: 107 ccggcgagcttgttgtcccagctgaacacgtcgacgtcgtcgttggcgccgag 55
>gb|BQ246704.1|BQ246704 TaE15006G04R TaE15 Triticum aestivum cDNA clone TaE15006G04R, mRNA
sequence
Length = 539
Score = 153 bits (77), Expect = 3e-035
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggat 544
||||||||| || ||||||||||| |||||||||||| ||||| || | |||||||||
Sbjct: 511 gcagccgatgcgtgccgggtgcgcgtccacggacggcatcgagcacgccctgtggtggat 452
Query: 545 ccgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcc 604
|| | ||||| | ||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 451 cctctgcgggtagcgcgcgccgtagcccaccatgtacgacatccccagcgggttgtcgcc 392
Query: 605 cagtatgtagtccacctgccgcttggcca 633
||| | ||||||||| |||||||||||||
Sbjct: 391 cagcacgtagtccacgtgccgcttggcca 363
>gb|AL812076.1|AL812076 AL812076 e:310 Triticum aestivum cDNA clone F10_e310_plate_10, mRNA
sequence
Length = 593
Score = 151 bits (76), Expect = 1e-034
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggat 544
||||||||| |||||||||||||| ||||||||||||| |||| || | |||||||||
Sbjct: 565 gcagccgatgcgcgccgggtgcgcggccacggacggcatcgaggacgccctgtggtggat 506
Query: 545 ccgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcc 604
|| | ||||| | ||||||||||| ||||| ||||||||||||| ||||||||||||||
Sbjct: 505 cctctgcgggtagcgcgcgccgtagcccacgatgtacgacatcccnagcgggttgtcgcc 446
Query: 605 cagtatgtagtccacctgccgcttggc 631
||| | |||||||||||||||||||||
Sbjct: 445 cagcacgtagtccacctgccgcttggc 419
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 119 ccggcgagcttgttgtcccagctgaacacgtcgacgtcgtcgttggcgcc 70
>gb|BF473330.1|BF473330 WHE0923_C03_F05ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0923_C03_F05, mRNA sequence
Length = 430
Score = 145 bits (73), Expect = 8e-033
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggat 544
||||||||| ||||||||||||| ||||||||||||| ||| || | |||||||||
Sbjct: 388 gcagccgatgtgcgccgggtgcgcggccacggacggcatcgacgacgccctgtggtggat 329
Query: 545 ccgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcc 604
|| | ||||| | ||||||||||| ||||||||||| ||||||| |||||||||||||||
Sbjct: 328 cctctgcgggtagcgcgcgccgtagcccaccatgtaggacatccccagcgggttgtcgcc 269
Query: 605 cagtatgtagtccacctgccgcttggcca 633
||| | |||||||||||||||||||||||
Sbjct: 268 cagcacgtagtccacctgccgcttggcca 240
>gb|BQ243798.1|BQ243798 TaE15008G07F TaE15 Triticum aestivum cDNA clone TaE15008G07F, mRNA
sequence
Length = 535
Score = 145 bits (73), Expect = 8e-033
Identities = 130/149 (87%)
Strand = Plus / Plus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggat 544
||||||||| ||||||||||||| ||||||||||||| ||| || | |||||||||
Sbjct: 345 gcagccgatgtgcgccgggtgcgcggccacggacggcatcgacaacgccctgtggtggat 404
Query: 545 ccgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcc 604
|| | ||||| | ||||||||||| ||||||||||| ||||||| |||||||||||||||
Sbjct: 405 cctctgcgggtagcgcgcgccgtaacccaccatgtaggacatccccagcgggttgtcgcc 464
Query: 605 cagtatgtagtccacctgccgcttggcca 633
||| | |||||||||||||||||||||||
Sbjct: 465 cagcacgtagtccacctgccgcttggcca 493
>gb|BQ246543.1|BQ246543 TaE15008G07R TaE15 Triticum aestivum cDNA clone TaE15008G07R, mRNA
sequence
Length = 698
Score = 145 bits (73), Expect = 8e-033
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggat 544
||||||||| ||||||||||||| ||||||||||||| ||| || | |||||||||
Sbjct: 589 gcagccgatgtgcgccgggtgcgcggccacggacggcatcgacgacgccctgtggtggat 530
Query: 545 ccgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcc 604
|| | ||||| | ||||||||||| ||||||||||| ||||||| |||||||||||||||
Sbjct: 529 cctctgcgggtagcgcgcgccgtagcccaccatgtaggacatccccagcgggttgtcgcc 470
Query: 605 cagtatgtagtccacctgccgcttggcca 633
||| | |||||||||||||||||||||||
Sbjct: 469 cagcacgtagtccacctgccgcttggcca 441
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 144 ccggcgagcttgttgtcccagctgaacacgtcgaggtcgtcgttggcgcc 95
>gb|CD899215.1|CD899215 G174.111J02F010827 G174 Triticum aestivum cDNA clone G174111J02,
mRNA sequence
Length = 477
Score = 133 bits (67), Expect = 3e-029
Identities = 118/135 (87%)
Strand = Plus / Minus
Query: 499 ccgggtgcgccgccacggacggcagcgagctggcgcggtggtggatccgccgcgggaacc 558
|||||||||| ||||||||||||| ||| || | ||||||||||| | ||||| | |
Sbjct: 395 ccgggtgcgcggccacggacggcatcgacgacgccctgtggtggatcctctgcgggtagc 336
Query: 559 gcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcccagtatgtagtcca 618
|||||||||| ||||||||||| ||||||| |||||||||||||||||| | ||||||||
Sbjct: 335 gcgcgccgtagcccaccatgtaggacatccccagcgggttgtcgcccagcacgtagtcca 276
Query: 619 cctgccgcttggcca 633
|||||||||||||||
Sbjct: 275 cctgccgcttggcca 261
>gb|BJ249628.1|BJ249628 BJ249628 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11m14 3', mRNA sequence
Length = 355
Score = 119 bits (60), Expect = 5e-025
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 306 gagaagtaggcgaggaggcccatgagcggcgcgttgatgtacgtggtgggctcggactgc 365
|||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 271 gagaagtaggcgaggaggcccagcagcggggcgttgatgtaggtggtgggctcggactgc 330
Query: 366 tggaacacggcgcgcgcgtcgggg 389
||||| ||||| ||||||||||||
Sbjct: 331 tggaagacggcccgcgcgtcgggg 354
>gb|BJ243564.2|BJ243564 BJ243564 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11m14 5', mRNA sequence
Length = 377
Score = 119 bits (60), Expect = 5e-025
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 306 gagaagtaggcgaggaggcccatgagcggcgcgttgatgtacgtggtgggctcggactgc 365
|||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 97 gagaagtaggcgaggaggcccagcagcggggcgttgatgtaggtggtgggctcggactgc 38
Query: 366 tggaacacggcgcgcgcgtcgggg 389
||||| ||||| ||||||||||||
Sbjct: 37 tggaagacggcccgcgcgtcgggg 14
>gb|BE398846.1|BE398846 WHE0027.A04F990514 ITEC WHE Wheat Endosperm Library Triticum
aestivum cDNA clone WHE0027.A04, mRNA sequence
Length = 412
Score = 107 bits (54), Expect = 2e-021
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggat 544
||||||||| |||||||||||||| ||||||||||||| |||| || | |||||||||
Sbjct: 303 gcagccgatgcgcgccgggtgcgcggccacggacggcatcgaggacgccctgtggtggat 362
Query: 545 ccgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcg 594
|| | ||||| | ||||||||||| ||||||||||||||||||| |||||
Sbjct: 363 cctctgcgggtagcgcgcgccgtagcccaccatgtacgacatccccagcg 412
>gb|BM135004.1|BM135004 WHE0460_G07_M13ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0460_G07_M13,
mRNA sequence
Length = 534
Score = 83.8 bits (42), Expect = 3e-014
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 546 cgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgccc 605
|||| |||| ||||||| ||| ||||||||||||||||||||| | |||||| |||||
Sbjct: 522 cgcctcgggtaccgcgccccgaaccccaccatgtacgacatccccgccgggttcgcgccc 463
Query: 606 agtatgtagtccacctgc 623
||||||||||||||||||
Sbjct: 462 agtatgtagtccacctgc 445
>gb|BE414305.1|BE414305 SCU008.C06.R990714 ITEC SCU Wheat Endosperm Library Triticum
aestivum cDNA clone SCU008.C06, mRNA sequence
Length = 642
Score = 75.8 bits (38), Expect = 6e-012
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 546 cgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgccc 605
|||| |||| ||||||| ||| ||||||||||||||||||||| | |||||| |||||
Sbjct: 576 cgcctcgggtaccgcgccccgaaccccaccatgtacgacatccccgccgggttcgcgccc 517
Query: 606 agtatgtagtccacctgc 623
|| |||||||||||||||
Sbjct: 516 aggatgtagtccacctgc 499
>gb|CD932094.1|CD932094 GR45.116N13F010420 GR45 Triticum aestivum cDNA clone GR45116N13,
mRNA sequence
Length = 689
Score = 75.8 bits (38), Expect = 6e-012
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 546 cgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgccc 605
|||| |||| ||||||| ||| ||||||||||||||||||||| | |||||| |||||
Sbjct: 467 cgcctcgggtaccgcgccccgaaccccaccatgtacgacatccccgccgggttcgcgccc 408
Query: 606 agtatgtagtccacctgc 623
|| |||||||||||||||
Sbjct: 407 aggatgtagtccacctgc 390
>gb|BJ244688.1|BJ244688 BJ244688 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf16c09 5', mRNA sequence
Length = 340
Score = 73.8 bits (37), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 292 ggttgggatgtgccgagaagtaggcgaggaggcccatgagcggcgcgttgatgtacgtgg 351
||||||| || || |||||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct: 66 ggttggggtgggcggagaagtaggcgaggaggcccagcagcggggcgttgatgtaggtgg 7
Query: 352 tgggc 356
|||||
Sbjct: 6 tgggc 2
>gb|BQ606823.1|BQ606823 BRY_2698 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 504
Score = 69.9 bits (35), Expect = 4e-010
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 546 cgccgcgggaaccgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgccc 605
|||| |||| ||||||| ||| ||||||||||||||||||||| | |||||| ||| |
Sbjct: 438 cgcctcgggtaccgcgccccgaaccccaccatgtacgacatccccgccgggttcgcgcnc 379
Query: 606 agtatgtagtccacctgc 623
|| |||||||||||||||
Sbjct: 378 aggatgtagtccacctgc 361
>gb|BJ249314.1|BJ249314 BJ249314 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf10g01 3', mRNA sequence
Length = 613
Score = 65.9 bits (33), Expect = 6e-009
Identities = 80/93 (86%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 531 gcgcggtggtggatccgccgcgggaac-cgcgcgccgtaccccaccatgtacgacatccg 589
|||||||||||||| |||||||||||| ||| ||||| | ||||||||||||||||| |
Sbjct: 455 gcgcggtggtggatgcgccgcgggaacgcgc-cgccgaagcccaccatgtacgacatgcc 513
Query: 590 cagcgggttgtcgcccagtatgtagtccacctg 622
|| ||||||| ||||| |||||||| |||||
Sbjct: 514 catcgggttgctccccaggatgtagtcgacctg 546
>gb|CA701904.1|CA701904 wkm2c.pk005.p21 wkm2c Triticum aestivum cDNA clone wkm2c.pk005.p21
5' end, mRNA sequence
Length = 506
Score = 63.9 bits (32), Expect = 2e-008
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 499 ccgggtgcgccgccacggacggcagcgagctggcgcggtggtggatccgccgcgggaacc 558
||||||||||||| ||||| ||||||||| ||| |||||||||| | | |||| ||
Sbjct: 99 ccgggtgcgccgcgacggagggcagcgaggaggcccggtggtggagcttcttcgggtact 40
Query: 559 gcgcgccgtaccccaccatgtacgacat 586
||||||||||||||||||||||||||
Sbjct: 39 tggcgccgtaccccaccatgtacgacat 12
Score = 60.0 bits (30), Expect = 4e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 409 tgggcccgcccacgacggcgcccacgagcaggttcgggttgg 450
|||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 189 tgggcccgcccacgacggcgccgacgtgcacgttcgggttgg 148
>gb|CN008704.1|CN008704 WHE2644_B09_D18ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2644_B09_D18,
mRNA sequence
Length = 534
Score = 63.9 bits (32), Expect = 2e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1052 agcagctcgtcctggtatccggagtagtcgcagtagcaggggca 1095
||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 181 agcagctcgtcctggtatccggagtaggagcagtagtaggggca 138
Score = 46.1 bits (23), Expect = 0.006
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 920 gccggcgtgcttgttgtcccagccgaa 946
||||||||||||||||||||| |||||
Sbjct: 311 gccggcgtgcttgttgtcccacccgaa 285
>gb|BE443671.1|BE443671 WHE1121_F03_K05ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1121_F03_K05,
mRNA sequence
Length = 618
Score = 60.0 bits (30), Expect = 4e-007
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtggat 544
|||||||||| | ||||||||||||| ||||| |||||||| ||| ||||||||||
Sbjct: 508 gcagccgatcttccccgggtgcgccgcgacggagggcagcgacgaggcccggtggtggag 567
Query: 545 ccgccgcgggaaccgcgcgccgtaccccaccatgtacgacat 586
| | |||| || ||||||||||||||||||||||||||
Sbjct: 568 cttcttcgggtacttggcgccgtaccccaccatgtacgacat 609
Score = 52.0 bits (26), Expect = 9e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 409 tgggcccgcccacgacggcgcccacgagcaggttcgggttgg 450
|||||||||||||||||||||| ||| | | |||||||||||
Sbjct: 432 tgggcccgcccacgacggcgccgacgtgaacgttcgggttgg 473
>gb|BQ169564.1|BQ169564 WHE0954_E10_J20ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0954_E10_J20, mRNA sequence
Length = 529
Score = 60.0 bits (30), Expect = 4e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 409 tgggcccgcccacgacggcgcccacgagcaggttcgggttgg 450
|||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 436 tgggcccgcccacgacggcgccgacgtgcacgttcgggttgg 477
>gb|CD452713.1|CD452713 WHE1121_F03_K05ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1121_F03_K05,
mRNA sequence
Length = 591
Score = 52.0 bits (26), Expect = 9e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 409 tgggcccgcccacgacggcgcccacgagcaggttcgggttgg 450
|||||||||||||||||||||| ||| | | |||||||||||
Sbjct: 162 tgggcccgcccacgacggcgccgacgtgaacgttcgggttgg 121
Score = 46.1 bits (23), Expect = 0.006
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 485 gcagccgatccgcgccgggtgcgccgccacggacggcagcgagctggcgcggtggtgga 543
|||||||||| | ||||||||||||| ||||| |||||||| ||| ||||||||||
Sbjct: 86 gcagccgatcttccccgggtgcgccgcgacggagggcagcgacgaggcccggtggtgga 28
>gb|BJ243270.1|BJ243270 BJ243270 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf10g01 5', mRNA sequence
Length = 607
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 927 tgcttgttgtcccagccgaactcgttga 954
|||||||||||||||| |||||||||||
Sbjct: 421 tgcttgttgtcccagctgaactcgttga 394
>gb|CA710781.1|CA710781 wdk2c.pk016.f22 wdk2c Triticum aestivum cDNA clone wdk2c.pk016.f22
5' end, mRNA sequence
Length = 321
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 487 agccgatccgcgccgggtgcgccgccacggacggca 522
||||||| ||||||||||||| |||||||||||||
Sbjct: 203 agccgatgtgcgccgggtgcgcggccacggacggca 238
>gb|CK207150.1|CK207150 FGAS018767 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1025
Score = 48.1 bits (24), Expect = 0.001
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 1052 agcagctcgtcctggtatccggagtagtcgcagtagcaggggca 1095
|||||||||||||| |||||||||||| ||||||| |||||||
Sbjct: 861 agcagctcgtcctg-tatccggagtaggagcagtagtaggggca 819
>gb|AL815068.1|AL815068 AL815068 h:116 Triticum aestivum cDNA clone E07_h116_plate_7, mRNA
sequence
Length = 604
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 602 gcccagtatgtagtccacctgccgcttggcca 633
|||||| | |||||||||||||||||||||||
Sbjct: 604 gcccagcacgtagtccacctgccgcttggcca 573
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 276 ccggcgagcttgttgtcccagctgaacacgtcgaggtcgtcgttggcgcc 227
>gb|BQ247074.1|BQ247074 TaE15001F10R TaE15 Triticum aestivum cDNA clone TaE15001F10R, mRNA
sequence
Length = 495
Score = 46.1 bits (23), Expect = 0.006
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 558 cgcgcgccgtaccccaccatgtacgacatccgcagcgggttgtcgcccagtatgtagtc 616
|||| |||||| ||||||||||| || ||||||||||||| |||||| ||||||||
Sbjct: 492 cgcgggccgtagcccaccatgtagctcagccgcagcgggttgcggcccaggatgtagtc 434
>gb|CK214959.1|CK214959 FGAS026903 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1118
Score = 46.1 bits (23), Expect = 0.006
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 563 gccgtaccccaccatgtacgacatccgcagcgggttgtcgcccagtatgta 613
|||||||||||||||||| || ||||||||||||| |||||| |||||
Sbjct: 593 gccgtaccccaccatgtagctcagccgcagcgggttgcggcccaggatgta 643
>gb|BF485200.1|BF485200 WHE1789_E12_J23ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1789_E12_J23, mRNA sequence
Length = 378
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 108 ccggcgagcttgttgtcccagctgaacacgtcgaggtcgtcgttggcgcc 59
>gb|BQ244648.1|BQ244648 TaE15039F04R TaE15 Triticum aestivum cDNA clone TaE15039F04R, mRNA
sequence
Length = 237
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 186 ccggcgagcttgttgtcccagctgaacacgtcgaggtcgtcgttggcgcc 137
>gb|CD895962.1|CD895962 G174.101H08F010821 G174 Triticum aestivum cDNA clone G174101H08,
mRNA sequence
Length = 498
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 209 ccggcgagcttgttgtcccagctgaacacgtcgaggtcgtcgttggcgcc 160
>gb|CD898898.1|CD898898 G174.110G24F010822 G174 Triticum aestivum cDNA clone G174110G24,
mRNA sequence
Length = 720
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 566 ccggcgagcttgttgtcccagctgaacacgtcgaggtcgtcgttggcgcc 517
>gb|AL812239.1|AL812239 AL812239 e:310 Triticum aestivum cDNA clone C08_e310_plate_1, mRNA
sequence
Length = 639
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 555 ccggcgagcttgttgtcccagctgaacacgtcgacgtcgtcgttggcgcc 506
>gb|AL812398.1|AL812398 AL812398 e:310 Triticum aestivum cDNA clone D10_e310_plate_3, mRNA
sequence
Length = 497
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 206 ccggcgagcttgttgtcccagctgaacacgtcgaggtcgtcgttggcgcc 157
>gb|AL814675.1|AL814675 AL814675 h:116 Triticum aestivum cDNA clone D06_h116_plate_1, mRNA
sequence
Length = 468
Score = 44.1 bits (22), Expect = 0.023
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 921 ccggcgtgcttgttgtcccagccgaactcgttgatggcgtcgctggcgcc 970
|||||| ||||||||||||||| |||| ||| || | ||||| |||||||
Sbjct: 371 ccggcgagcttgttgtcccagctgaacacgtcgacgtcgtcgttggcgcc 322
>gb|BF199753.1|BF199753 WHE0591-0594_P18_P18ZE Triticum monococcum vegetative apex cDNA
library Triticum monococcum cDNA clone
WHE0591-0594_P18_P18, mRNA sequence
Length = 340
Score = 42.1 bits (21), Expect = 0.089
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 534 cggtggtggatccgccgcgggaaccgcgcgccgtaccccaccatgtacgacat 586
||||||||||||||| | || ||| |||||||||| ||||||||||||||
Sbjct: 62 cggtggtggatccgctgaggatacctgtcgccgtacccgaccatgtacgacat 10
>gb|BE398979.1|BE398979 WHE0028.H04F990514 ITEC WHE Wheat Endosperm Library Triticum
aestivum cDNA clone WHE0028.H04, mRNA sequence
Length = 358
Score = 40.1 bits (20), Expect = 0.35
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 485 gcagccgatccgcgccgggtgcgc 508
||||||||| ||||||||||||||
Sbjct: 24 gcagccgatgcgcgccgggtgcgc 1
>gb|BE430054.1|BE430054 TAS006.E11R990624 ITEC TAS Wheat cDNA Library Triticum aestivum
cDNA clone TAS006.E11, mRNA sequence
Length = 525
Score = 40.1 bits (20), Expect = 0.35
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 380 cgcgtcggggaaggcgtcgg 399
||||||||||||||||||||
Sbjct: 190 cgcgtcggggaaggcgtcgg 209
>gb|AL822123.1|AL822123 AL822123 p:234 Triticum aestivum cDNA clone
B01_p234_plate_20_run_2, mRNA sequence
Length = 574
Score = 40.1 bits (20), Expect = 0.35
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 380 cgcgtcggggaaggcgtcgg 399
||||||||||||||||||||
Sbjct: 199 cgcgtcggggaaggcgtcgg 218
>gb|AL822465.1|AL822465 AL822465 p:234 Triticum aestivum cDNA clone B05_p234_plate_26, mRNA
sequence
Length = 261
Score = 40.1 bits (20), Expect = 0.35
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 380 cgcgtcggggaaggcgtcgg 399
||||||||||||||||||||
Sbjct: 197 cgcgtcggggaaggcgtcgg 216
>gb|AL824903.1|AL824903 AL824903 p:234 Triticum aestivum cDNA clone G04_p234_plate_6, mRNA
sequence
Length = 446
Score = 40.1 bits (20), Expect = 0.35
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 380 cgcgtcggggaaggcgtcgg 399
||||||||||||||||||||
Sbjct: 195 cgcgtcggggaaggcgtcgg 214
>gb|AL825615.1|AL825615 AL825615 p:234 Triticum aestivum cDNA clone F06_p234_plate_13, mRNA
sequence
Length = 560
Score = 40.1 bits (20), Expect = 0.35
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 380 cgcgtcggggaaggcgtcgg 399
||||||||||||||||||||
Sbjct: 205 cgcgtcggggaaggcgtcgg 224
>gb|AL827375.1|AL827375 AL827375 p:638 Triticum aestivum cDNA clone D12_p638_plate_3, mRNA
sequence
Length = 328
Score = 40.1 bits (20), Expect = 0.35
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 380 cgcgtcggggaaggcgtcgg 399
||||||||||||||||||||
Sbjct: 145 cgcgtcggggaaggcgtcgg 164
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 381,299
Number of Sequences: 636343
Number of extensions: 381299
Number of successful extensions: 110185
Number of sequences better than 0.5: 92
Number of HSP's better than 0.5 without gapping: 91
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 109967
Number of HSP's gapped (non-prelim): 203
length of query: 1222
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1202
effective length of database: 354,513,379
effective search space: 426125081558
effective search space used: 426125081558
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)