BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2590996.2.1
(1086 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AJ438334.1|TAE438334 Triticum aestivum partial mRNA for... 319 2e-085
emb|AJ438337.1|TAE438337 Triticum aestivum partial mRNA for... 246 3e-063
gb|AJ610863.1|AJ610863 AJ610863 Triticum turgidum subsp. du... 226 3e-057
gb|BJ280414.1|BJ280414 BJ280414 Y. Ogihara unpublished cDNA... 176 2e-042
gb|BJ285398.1|BJ285398 BJ285398 Y. Ogihara unpublished cDNA... 174 8e-042
gb|BJ238400.1|BJ238400 BJ238400 Y. Ogihara unpublished cDNA... 151 1e-034
gb|CD871773.1|CD871773 AZO2.119A15R010403 AZO2 Triticum aes... 151 1e-034
gb|CA636853.1|CA636853 wle1n.pk0112.e11 wle1n Triticum aest... 141 1e-031
gb|CA689309.1|CA689309 wlm96.pk045.j9 wlm96 Triticum aestiv... 115 7e-024
gb|CK213999.1|CK213999 FGAS025914 Triticum aestivum FGAS: L... 111 1e-022
gb|BJ286678.1|BJ286678 BJ286678 Y. Ogihara unpublished cDNA... 109 4e-022
gb|AL821254.1|AL821254 AL821254 p:133 Triticum aestivum cDN... 109 4e-022
gb|CK213976.1|CK213976 FGAS025891 Triticum aestivum FGAS: L... 109 4e-022
gb|BJ281594.1|BJ281594 BJ281594 Y. Ogihara unpublished cDNA... 107 2e-021
gb|BG906285.1|BG906285 TaLr1148B05F TaLr1 Triticum aestivum... 96 6e-018
gb|BG908180.1|BG908180 TaLr1166B10F TaLr1 Triticum aestivum... 96 6e-018
gb|CD873775.1|CD873775 AZO3.100K08F010925 AZO3 Triticum aes... 96 6e-018
gb|CK199611.1|CK199611 FGAS008114 Triticum aestivum FGAS: L... 92 1e-016
gb|CV779558.1|CV779558 FGAS073967 Triticum aestivum FGAS: L... 92 1e-016
gb|CA698899.1|CA698899 wlk8.pk0009.g8 wlk8 Triticum aestivu... 90 4e-016
gb|CK207680.1|CK207680 FGAS019331 Triticum aestivum FGAS: L... 90 4e-016
gb|DR736708.1|DR736708 FGAS082078 Triticum aestivum FGAS: L... 90 4e-016
gb|BJ244644.1|BJ244644 BJ244644 Y. Ogihara unpublished cDNA... 88 1e-015
gb|BJ250503.1|BJ250503 BJ250503 Y. Ogihara unpublished cDNA... 88 1e-015
gb|BQ161855.1|BQ161855 WHE0483-0486_J24_J24ZT Wheat Fusariu... 88 1e-015
gb|CK163693.1|CK163693 FGAS016323 Triticum aestivum FGAS: L... 88 1e-015
gb|CK163712.1|CK163712 FGAS016342 Triticum aestivum FGAS: L... 88 1e-015
emb|AJ438331.1|TAE438331 Triticum aestivum partial mRNA for... 88 1e-015
emb|AJ438332.1|TAE438332 Triticum aestivum partial mRNA for... 88 1e-015
emb|AJ438336.1|TAE438336 Triticum aestivum partial mRNA for... 88 1e-015
emb|AJ438330.1|TAE438330 Triticum aestivum partial mRNA for... 84 2e-014
gb|BQ161980.1|BQ161980 WHE0488_G12_M24ZT Wheat Fusarium gra... 82 9e-014
gb|BG905076.1|BG905076 TaLr1137A11F TaLr1 Triticum aestivum... 80 4e-013
gb|AL824774.1|AL824774 AL824774 p:234 Triticum aestivum cDN... 78 1e-012
gb|CA720937.1|CA720937 wkm2n.pk008.h12 wkm2n Triticum aesti... 76 6e-012
gb|CD882945.1|CD882945 F1.111M04F010502 F1 Triticum aestivu... 76 6e-012
gb|AJ610074.1|AJ610074 AJ610074 Triticum turgidum subsp. du... 76 6e-012
emb|AJ438333.1|TAE438333 Triticum aestivum partial mRNA for... 76 6e-012
emb|AJ438335.1|TAE438335 Triticum aestivum partial mRNA for... 76 6e-012
gb|BQ169201.1|BQ169201 WHE2162_E06_J12ZT Triticum turgidum ... 72 9e-011
gb|CA658631.1|CA658631 wlm0.pk042.c16 wlm0 Triticum aestivu... 72 9e-011
gb|CD872989.1|CD872989 AZO2.122B21F010208 AZO2 Triticum aes... 72 9e-011
gb|CD872990.1|CD872990 AZO2.122B21R010405 AZO2 Triticum aes... 72 9e-011
gb|CD871772.1|CD871772 AZO2.119A15F010207 AZO2 Triticum aes... 70 3e-010
emb|AJ438338.1|TAE438338 Triticum aestivum partial mRNA for... 70 3e-010
gb|BE403570.1|BE403570 WHE0434_B08_C16ZS Wheat etiolated se... 66 5e-009
gb|BE403580.1|BE403580 WHE0434_C08_E16ZS Wheat etiolated se... 66 5e-009
gb|CA684187.1|CA684187 wlm96.pk026.g21 wlm96 Triticum aesti... 64 2e-008
gb|CA691407.1|CA691407 wlm96.pk049.l3 wlm96 Triticum aestiv... 62 9e-008
gb|BM137722.1|BM137722 WHE0483-0486_J24_J24ZS Wheat Fusariu... 60 3e-007
gb|CA687210.1|CA687210 wlm96.pk035.a23 wlm96 Triticum aesti... 60 3e-007
gb|CD882946.1|CD882946 F1.111M04R010702 F1 Triticum aestivu... 58 1e-006
gb|BM134647.1|BM134647 WHE0451_E03_E03ZS Wheat Fusarium gra... 56 5e-006
gb|BJ231129.1|BJ231129 BJ231129 Y. Ogihara unpublished cDNA... 56 5e-006
gb|BJ295748.1|BJ295748 BJ295748 Y. Ogihara unpublished cDNA... 56 5e-006
gb|CA733021.1|CA733021 wlp1c.pk006.f2 wlp1c Triticum aestiv... 56 5e-006
gb|CD866162.1|CD866162 AZO2.102L19R010330 AZO2 Triticum aes... 56 5e-006
gb|BE425377.1|BE425377 WHE313_G03_G03ZS Wheat unstressed se... 52 8e-005
gb|BQ483250.1|BQ483250 WHE3506_D01_G02ZS Wheat unstressed r... 52 8e-005
gb|BQ578506.1|BQ578506 WHE0304_F06_L12ZS Wheat unstressed s... 52 8e-005
gb|CA625114.1|CA625114 wl1n.pk0123.c12 wl1n Triticum aestiv... 52 8e-005
gb|CA711259.1|CA711259 wdk2c.pk018.m3 wdk2c Triticum aestiv... 52 8e-005
gb|BE425526.1|BE425526 WHE0317_D03_D03ZS Wheat unstressed s... 50 3e-004
gb|BE445694.1|BE445694 WHE1452_G06_M12ZS Wheat etiolated se... 50 3e-004
gb|BJ230352.1|BJ230352 BJ230352 Y. Ogihara unpublished cDNA... 50 3e-004
gb|CD453031.1|CD453031 WHE1452_G06_M12ZT CS wheat etiolated... 50 3e-004
gb|CD876109.1|CD876109 AZO3.108K06R011126 AZO3 Triticum aes... 50 3e-004
gb|CD881956.1|CD881956 F1.104N12F010330 F1 Triticum aestivu... 50 3e-004
gb|CN012928.1|CN012928 WHE3954_F06_L12ZS Wheat Fusarium gra... 50 3e-004
gb|AJ717208.1|AJ717208 AJ717208 Triticum turgidum subsp. du... 50 3e-004
gb|CV760335.1|CV760335 FGAS054719 Triticum aestivum FGAS: L... 50 3e-004
emb|AJ438327.1|TAE438327 Triticum aestivum partial mRNA for... 50 3e-004
gb|BE488971.1|BE488971 WHE1077_B03_D05ZS Wheat unstressed s... 48 0.001
gb|BJ255947.1|BJ255947 BJ255947 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ318808.1|BJ318808 BJ318808 Y. Ogihara unpublished cDNA... 46 0.005
gb|CA688333.1|CA688333 wlm96.pk040.d13 wlm96 Triticum aesti... 46 0.005
gb|CV761615.1|CV761615 FGAS056003 Triticum aestivum FGAS: L... 46 0.005
gb|BF202058.1|BF202058 WHE1773_C02_E03ZS Wheat pre-anthesis... 44 0.020
gb|AL824749.1|AL824749 AL824749 p:234 Triticum aestivum cDN... 44 0.020
gb|BQ753201.1|BQ753201 WHE4124_C05_F10ZS Wheat salt-stresse... 44 0.020
gb|CA697858.1|CA697858 wlk4.pk0024.b4 wlk4 Triticum aestivu... 44 0.020
gb|CA714936.1|CA714936 wdk3c.pk022.k16 wdk3c Triticum aesti... 44 0.020
gb|CD876493.1|CD876493 AZO3.109P24R011127 AZO3 Triticum aes... 44 0.020
gb|CD929102.1|CD929102 GR45.107A07R010611 GR45 Triticum aes... 44 0.020
gb|CV764475.1|CV764475 FGAS058860 Triticum aestivum FGAS: L... 44 0.020
gb|BM137436.1|BM137436 WHE0475_B01_C01ZS Wheat Fusarium gra... 42 0.079
gb|BQ169893.1|BQ169893 WHE0977_D12_H23ZT Wheat pre-anthesis... 42 0.079
gb|CD490459.1|CD490459 WHE2904_F12_L24ZT CS wheat aluminum-... 42 0.079
gb|CD935623.1|CD935623 OV.101P23R010406 OV Triticum aestivu... 42 0.079
gb|BE428856.1|BE428856 MTD011.F01F990617 ITEC MTD Durum Whe... 40 0.31
gb|BJ208416.1|BJ208416 BJ208416 Y. Ogihara unpublished cDNA... 40 0.31
gb|BJ215688.1|BJ215688 BJ215688 Y. Ogihara unpublished cDNA... 40 0.31
gb|BQ802490.1|BQ802490 WHE2826_E05_I10ZS Triticum monococcu... 40 0.31
gb|CA710791.1|CA710791 wdk2c.pk016.h12 wdk2c Triticum aesti... 40 0.31
gb|CD878484.1|CD878484 AZO4.102N19F011002 AZO4 Triticum aes... 40 0.31
gb|CD885680.1|CD885680 G118.100B15R010921 G118 Triticum aes... 40 0.31
gb|CD937878.1|CD937878 OV.108F20R010501 OV Triticum aestivu... 40 0.31
gb|CK216261.1|CK216261 FGAS028248 Triticum aestivum FGAS: L... 40 0.31
gb|CV765798.1|CV765798 FGAS060185 Triticum aestivum FGAS: L... 40 0.31
>emb|AJ438334.1|TAE438334 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene),
clone ugt1i15b
Length = 589
Score = 319 bits (161), Expect = 2e-085
Identities = 455/553 (82%)
Strand = Plus / Minus
Query: 477 ctgctgctcggcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccag 536
||||||||| ||||||||||||||||||| ||| || ||||||||||| || | ||||||
Sbjct: 589 ctgctgctccgcgaagaagggccagcacaccatcggcacgccgccgcagatgccctccag 530
Query: 537 cgtggagttccacccggagtgcgtcaggaacacccccacggcatcatgctccagcacagc 596
|| |||||||| || |||||||| ||||||||||| ||||| || ||||||||||| |
Sbjct: 529 cgacgagttccagccagagtgcgtgaggaacacccctacggcctcgtgctccagcacctc 470
Query: 597 tgcctgcgggcaccacgtagacagcatgcttcgtccctctgtcgcagctgagaactctgg 656
|||||||||||| || |||| |||||| || ||||| || || || ||||||| ||
Sbjct: 469 ctgctgcgggcaccatgtcgacaacatgctccgcccctcagttgccgcatagaactccgg 410
Query: 657 cggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttccataggaagta 716
| | || |||| | || | | |||||| ||||| || || |||||||||||||||
Sbjct: 409 cagaagtgcggccttgacgtcgcccttgacaaggtcaggccgcacgttccataggaaggc 350
Query: 717 gtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccgt 776
||| || |||||||| ||||||||||||||||| | || ||||| ||||||||||||||
Sbjct: 349 gtaaccagtgttggcgagcccccacgcgaactccagcatatgctccttggacatcaccgt 290
Query: 777 gatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgagccaccggag 836
| |||||||||| ||||| | ||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 289 ggtgctcccgaaattgacgtgcaccacggagcgcggcggccggccgtcgagccaccggag 230
Query: 837 cggcgcctcctgctccttccacaggttggacccaatagcagcgacaggactgttcgcctg 896
|| || |||||||||||||||||||||||||||| | | ||| || || | | || |
Sbjct: 229 gggagcgtcctgctccttccacaggttggacccaacgccggagacggggctctcctccgg 170
Query: 897 cacgttgttccgcaccgtcagctggagcgggcccacggtgtagatgggcggcaggagctt 956
||| ||||| || |||||| ||||| || ||| | |||||||||||||||||||||||
Sbjct: 169 cacattgttgcgagccgtcaaatggagtggccccgctgtgtagatgggcggcaggagctt 110
Query: 957 cgccatggcagcgagcagcgtcgcgtcgagctcgtcgaaggtgttgatgaccaccgccga 1016
| ||||||| | |||| | ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 109 ggacatggcatcaagcaagggcgcgtcgagttcgtcccaggtgttgatgaccaccgccga 50
Query: 1017 cgcctgcgacatg 1029
|||||||||||||
Sbjct: 49 cgcctgcgacatg 37
>emb|AJ438337.1|TAE438337 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt4ni13a
Length = 602
Score = 246 bits (124), Expect = 3e-063
Identities = 335/404 (82%), Gaps = 1/404 (0%)
Strand = Plus / Minus
Query: 466 cggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgccgccgcaa 525
|||||||||||||||||||| || ||||||||||| |||| ||| |||||||||||| |
Sbjct: 600 cggcagttggtctgctgctccgcaaagaagggccaacacaccattggaacgccgccg-at 542
Query: 526 atactctccagcgtggagttccacccggagtgcgtcaggaacacccccacggcatcatgc 585
|| | |||||||| ||||||||||| |||||||| ||||| | ||| ||||| ||||||
Sbjct: 541 atgccctccagcgacgagttccacccagagtgcgtgaggaagatccctacggcctcatgc 482
Query: 586 tccagcacagctgcctgcgggcaccacgtagacagcatgcttcgtccctctgtcgcagct 645
|||||||| ||||||||||||| || || |||||||| || ||||| ||||| ||
Sbjct: 481 tccagcaccttctcctgcgggcaccatgtcgagagcatgctccgcccctcggtcgccgca 422
Query: 646 gagaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttc 705
| ||||||||||| || || |||| | | |||||||||||| || || ||||||
Sbjct: 421 aaaaactctggcggtagtgtggtctcgtcgtcgcccttgacgaggtcaggccgcacgttc 362
Query: 706 cataggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttg 765
|| |||||| ||||||||||||||||||||||||||||||||| | | ||||| |||
Sbjct: 361 cacaggaaggcgtagccggtgttggccagcccccacgcgaactccaataaatgctccttg 302
Query: 766 gacatcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttg 825
|||||||||||||||||||| || || ||||||| |||||| || || |||||| |
Sbjct: 301 gacatcaccgtgatgctcccaaaatttacatacatcacggagttcgacggttggccgtcg 242
Query: 826 agccaccggagcggcgcctcctgctccttccacaggttggaccc 869
||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 241 agccaccggaggggcgcgtcctgctccttccacaggttggaccc 198
Score = 97.6 bits (49), Expect = 2e-018
Identities = 109/129 (84%)
Strand = Plus / Minus
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||| || ||||| || |||| ||||||||||||||| | ||||||| ||||||| |
Sbjct: 148 tggagtggccccactgtatagacgggcggcaggagcttggacatggcatcgagcaggtcc 89
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgccctccgtc 1038
| |||||||||||| |||||||||| |||||| ||||||||||||||||| | |||||
Sbjct: 88 gtgtcgagctcgtcccaggtgttgatcaccacccccgacgcctgcgacatggcggccgtc 29
Query: 1039 tcacggacg 1047
||| |||||
Sbjct: 28 tcatggacg 20
>gb|AJ610863.1|AJ610863 AJ610863 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 03642R, mRNA
sequence
Length = 562
Score = 226 bits (114), Expect = 3e-057
Identities = 297/358 (82%)
Strand = Plus / Minus
Query: 672 gtcgccactcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggc 731
|||| ||| |||||||||||| || ||||||||||| |||||| |||||| || |||||
Sbjct: 538 gtcgtcacccttgacgaggtcaggccgtacgttccacaggaaggcgtagcctgtattggc 479
Query: 732 cagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
|||||||||||||||||| | || ||||| |||||||||||||||||||| | || ||
Sbjct: 478 cagcccccacgcgaactccaacaaatgctccttggacatcaccgtgatgcttcgaaaatt 419
Query: 792 gacatacacaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctc 851
|| ||||| |||||||| |||| ||||||| ||||||||| || ||||| ||||||||
Sbjct: 418 tacgtacaccacggagcgtggcggccggccgtcgagccaccgaaggggcgcgtcctgctc 359
Query: 852 cttccacaggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcac 911
||||||||||||||| || || |||||| || || | | || | |||||||| || ||
Sbjct: 358 cttccacaggttggatccgatgccagcgagggggctctcctccggtacgttgttgcggac 299
Query: 912 cgtcagctggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgag 971
||| || |||||||| ||||| |||||||| ||||||||||| || |||||| ||||
Sbjct: 298 cgtgagatggagcggccccactgtgtagataggcggcaggagtttgtacatggcgtcgag 239
Query: 972 cagcgtcgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatg 1029
||| | | |||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 238 caggggtgagtcgagctcgtcccatgtgttgatgaccaccgccgaggcctgcgacatg 181
>gb|BJ280414.1|BJ280414 BJ280414 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr8a15 5', mRNA sequence
Length = 301
Score = 176 bits (89), Expect = 2e-042
Identities = 248/301 (82%)
Strand = Plus / Minus
Query: 701 cgttccataggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgct 760
|||||||||||||| || || |||||||||| ||||||||| ||||| | || ||||
Sbjct: 301 cgttccataggaaggcataaccagtgttggccaacccccacgcaaactccagcatatgct 242
Query: 761 cgttggacatcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggc 820
| ||||||||||||||| |||||||||| ||||| | ||| ||||||||||||| ||||
Sbjct: 241 ccttggacatcaccgtggtgctcccgaaattgacgtgcaccacggagcgcggcgggcggc 182
Query: 821 cgttgagccaccggagcggcgcctcctgctccttccacaggttggacccaatagcagcga 880
||| |||||||||||| || || ||||||||||||||||||||||||||||| | | ||
Sbjct: 181 cgtcgagccaccggaggggagcatcctgctccttccacaggttggacccaatgccggaga 122
Query: 881 caggactgttcgcctgcacgttgttccgcaccgtcagctggagcgggcccacggtgtaga 940
||| || | | || |||| ||||| || | |||| ||||| || ||| | |||||||
Sbjct: 121 tagggctctcctccggcacattgttgcgagcagtcaaatggagtggccccgctgtgtaga 62
Query: 941 tgggcggcaggagcttcgccatggcagcgagcagcgtcgcgtcgagctcgtcgaaggtgt 1000
|||||||||||||||| | ||||||| | |||| | ||||||||||||||| ||||||
Sbjct: 61 tgggcggcaggagcttggacatggcatcaagcaagggcgcgtcgagctcgtcccaggtgt 2
Query: 1001 t 1001
|
Sbjct: 1 t 1
>gb|BJ285398.1|BJ285398 BJ285398 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr8a15 3', mRNA sequence
Length = 629
Score = 174 bits (88), Expect = 8e-042
Identities = 229/276 (82%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || |||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 338 ccgatgccccactccgtacacttgaaacggcagttggtctgctgctccgcgaagaagggc 397
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||||| || | |||||| | |||||||| || ||||||
Sbjct: 398 cagcacaccatcggcacgccgccgcagatgccctccagtgacgagttccagccagagtgc 457
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| ||||||||||| ||||| || ||||||||||| | ||||||||||||||| |||
Sbjct: 458 gtgaggaacacccctacggcctcgtgctccagcacctcctgctgcgggcaccacgtcgac 517
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| || ||||| || || || ||||||| ||||| || |||| | || |
Sbjct: 518 agcatgctccgcccctcagttgccgcatagaactccggcggaagtgcggccttgacgtcg 577
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaag 714
| |||||||||||| || || |||||||||||||||
Sbjct: 578 cccttgacgaggtcaggccgcacgttccataggaag 613
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 369 ctccccctccatggcctcccgtat 392
||||||||||||||||||||||||
Sbjct: 268 ctccccctccatggcctcccgtat 291
>gb|BJ238400.1|BJ238400 BJ238400 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe1n06 3', mRNA sequence
Length = 548
Score = 151 bits (76), Expect = 1e-034
Identities = 160/188 (85%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| ||||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 357 ccgatgccccactccgtgcacttgtagcggcagttggtctgctgctccgcaaagaagggc 416
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|| |||| ||| |||||||||||||| || | |||||||| ||||||||||| ||||||
Sbjct: 417 caacacaccatcggaacgccgccgcatatgccctccagcgacgagttccacccagagtgc 476
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| ||||| | ||| ||||| || |||| |||||| ||||||||||||| || ||
Sbjct: 477 gtgaggaaaagccctacggcctcgtgcttcagcaccttctcctgcgggcaccatgtcgag 536
Query: 619 agcatgct 626
||||||||
Sbjct: 537 agcatgct 544
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
|||||||| |||| ||| ||||| ||||||||||||||||
Sbjct: 271 gcatctctcgccccttcgcccccgccatggcctcccgtat 310
>gb|CD871773.1|CD871773 AZO2.119A15R010403 AZO2 Triticum aestivum cDNA clone AZO2119A15,
mRNA sequence
Length = 637
Score = 151 bits (76), Expect = 1e-034
Identities = 151/176 (85%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct: 327 ccgatcccccactcggtgcacttgtaccgacagttggtctgctgctccccggcgaacggc 386
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||||||| || |||||| || | || ||||| |||||||||||||| |||||||||
Sbjct: 387 cagcacagcatcggcacgccggcggagatgctctcgagcgtggagttccagccggagtgc 446
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgt 614
||||||||||||||||| || || ||| | || || | |||||||||||||||||
Sbjct: 447 gtcaggaacacccccaccgcctcgtgcccgaggacctccgcctgcgggcaccacgt 502
Score = 50.1 bits (25), Expect = 3e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 683 tgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccc 739
||||||||||||| || |||||||||| ||| ||||||| ||| |||||||||||
Sbjct: 568 tgacgaggtccggccggacgttccatatgaacgtgtagccgctgtcggccagccccc 624
>gb|CA636853.1|CA636853 wle1n.pk0112.e11 wle1n Triticum aestivum cDNA clone
wle1n.pk0112.e11 5' end, mRNA sequence
Length = 514
Score = 141 bits (71), Expect = 1e-031
Identities = 134/155 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| ||||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 241 ccgatgccccactccgtgcacttgtagcggcagttggtctgctgctcagcaaagaagggc 300
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|| |||| ||| |||| ||||||||| || | |||||||| ||||||||||| ||||||
Sbjct: 301 caacacaccatcggaatgccgccgcatatgccctccagcgacgagttccacccagagtgc 360
Query: 559 gtcaggaacacccccacggcatcatgctccagcac 593
|| ||||| | || ||||| || |||||||||||
Sbjct: 361 gtgaggaagattcctacggcctcgtgctccagcac 395
Score = 73.8 bits (37), Expect = 2e-011
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 256 agcacctcttcgatgagcctgtctacgttgcgcatagaccgtccgtcaggccctgcagcg 315
|||||||| | ||||||||| || || |||||||| |||| ||||||| || ||| | |
Sbjct: 58 agcacctcatggatgagcctatcaacattgcgcatggaccttccgtcacaccgtgcggag 117
Query: 316 gccacggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccc 375
|||| |||||| |||| ||| || ||| ||||| |||||||| |||| ||| |||||
Sbjct: 118 gccagggcgctatcccggagctcttgcacacgccgtcgcatctctcgccccttcgccccc 177
Query: 376 tccatggcctcccgtat 392
|||||||||||||||||
Sbjct: 178 tccatggcctcccgtat 194
>gb|CA689309.1|CA689309 wlm96.pk045.j9 wlm96 Triticum aestivum cDNA clone wlm96.pk045.j9 5'
end, mRNA sequence
Length = 475
Score = 115 bits (58), Expect = 7e-024
Identities = 158/193 (81%)
Strand = Plus / Minus
Query: 672 gtcgccactcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggc 731
|||| ||| ||||| |||||| | |||||||| || |||||| |||||| || |||||
Sbjct: 269 gtcgtcacccttgangaggtcagcccgtacgttncacaggaaggcgtagcctgtattggc 210
Query: 732 cagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
|| ||||||||||||||| | || ||||| |||||||||||||||||||| || || ||
Sbjct: 209 cancccccacgcgaactccaacaaatgctccttggacatcaccgtgatgctaccaaaatt 150
Query: 792 gacatacacaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctc 851
|| ||| | |||||||| |||| || |||| || |||||| || ||| | ||||||||
Sbjct: 149 tacgtaccccacggagcgtggcggccgnccgtcganccaccgaaggggcacgtcctgctc 90
Query: 852 cttccacaggttg 864
|||||||||||||
Sbjct: 89 cttccacaggttg 77
>gb|CK213999.1|CK213999 FGAS025914 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1027
Score = 111 bits (56), Expect = 1e-022
Identities = 101/116 (87%)
Strand = Plus / Plus
Query: 460 ttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgccg 519
||||| |||| ||||||||||||||| ||||| |||||||||||||| | || || |||
Sbjct: 460 ttgtaccggctgttggtctgctgctccgcgaaaaagggccagcacagggtcggcaccccg 519
Query: 520 ccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
||||| | ||||||| ||| ||||||||||||||||||||||||||||| |||||
Sbjct: 520 ccgcacaggctctccaccgtcgagttccacccggagtgcgtcaggaacacgcccac 575
>gb|BJ286678.1|BJ286678 BJ286678 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr22n05 3', mRNA sequence
Length = 552
Score = 109 bits (55), Expect = 4e-022
Identities = 180/223 (80%), Gaps = 2/223 (0%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||||||||||||||| |||||||||||||||||||| | ||| ||||||
Sbjct: 320 ccgatgccccactcggtgcacttgtaccggcagttggtctgctgctctgtgaanaagggc 379
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtgga--gttccacccggagt 556
||||| | ||| || || ||| |||| || | |||| || || ||||||||| ||||
Sbjct: 380 cagcaaaccatcggcacaccgncgcagatgccttccaacgacgagtgttccacccagagt 439
Query: 557 gcgtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtag 616
| || || |||||||| ||||| || ||||||| ||| |||||||||||| ||
Sbjct: 440 gtgtgagaaacacccctacggcctcgtgctccancaccttctnctgcgggcaccatgtcn 499
Query: 617 acagcatgcttcgtccctctgtcgcagctgagaactctggcgg 659
| ||||||||||| |||| ||||| || |||||||| |||||
Sbjct: 500 agagcatgcttcgnccctncgtcgccgcggagaactccggcgg 542
Score = 56.0 bits (28), Expect = 5e-006
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 362 gccctttctccccctccatggcctcccg 389
||||||||||||||||||||||||||||
Sbjct: 243 gccctttctccccctccatggcctcccg 270
>gb|AL821254.1|AL821254 AL821254 p:133 Triticum aestivum cDNA clone C06_p133_plate_6, mRNA
sequence
Length = 459
Score = 109 bits (55), Expect = 4e-022
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||| || ||| ||||||||||||||||||||||||| | ||||||| | |||| | |
Sbjct: 313 tggagtggccccgcggtgtagatgggcggcaggagcttggacatggcatcaagcaagggc 254
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatg 1029
|||||||| ||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 253 gcgtcgagttcgtcccaggtgttgatgaccacagccgacgcctgcgacatg 203
Score = 77.8 bits (39), Expect = 1e-012
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 773 ccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgagccacc 832
||||| |||||||||| ||||| | ||| ||||||||||||| |||| || |||| ||
Sbjct: 459 ccgtggtgctcccgaaattgacgtgcaccacggagcgcggcggccggcagtcgagcaaca 400
Query: 833 ggagcggcgcctcctgctccttccacaggttggacccaa 871
|||| || || ||||||||||||||||||| ||||||||
Sbjct: 399 ggaggggagcgtcctgctccttccacaggtgggacccaa 361
>gb|CK213976.1|CK213976 FGAS025891 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1078
Score = 109 bits (55), Expect = 4e-022
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 461 tgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgccgc 520
|||| |||| ||||||||||||||| ||||| ||||||||||||||| | || || ||||
Sbjct: 463 tgtaccggctgttggtctgctgctccgcgaaaaagggccagcacagcgttgggaccccgc 522
Query: 521 cgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
|||| | ||||||| ||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 523 cgcacaggctctccaccgtcgagttccacccggagtgggtcaggaacacgcccac 577
>gb|BJ281594.1|BJ281594 BJ281594 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr22n05 5', mRNA sequence
Length = 446
Score = 107 bits (54), Expect = 2e-021
Identities = 244/310 (78%), Gaps = 2/310 (0%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||
Sbjct: 328 ccgatgccccactcggngcacttgtaccggcagttggtctgctgctctgtgaagaagggc 269
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtgga--gttccacccggagt 556
||||| | ||| || || |||| ||| || | |||| | || ||||||||| ||||
Sbjct: 268 cagcaaaccatcggcacaccgcngcanatgccttccaacnncgagtgttccacccagagt 209
Query: 557 gcgtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtag 616
| || || ||||||| ||||| || ||||||||||| | ||||||||||| || |
Sbjct: 208 gtgtgagaaacacccntacggcctcgtgctccagcaccttctcntgcgggcaccatgtcg 149
Query: 617 acagcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgc 676
| |||||| |||| ||||| ||| | || |||||||| ||||| || ||||| ||||
Sbjct: 148 agagcatgnttcgcccctccgtcnccgcggagaactccggcggaagtacggcgttgtcgt 89
Query: 677 cactcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcc 736
| |||||| ||||| || ||||||||||| | ||| ||| ||| | ||||||||||
Sbjct: 88 ggcccttgacaaggtcaggccgtacgttccacaanaaggtgtatccgctattggccagcc 29
Query: 737 cccacgcgaa 746
||| |||||
Sbjct: 28 nccaggcgaa 19
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccg 389
|||| ||| ||||||||||||||||||||||||||||
Sbjct: 414 gcatgtctcgccctttctccccctccatggcctcccg 378
>gb|BG906285.1|BG906285 TaLr1148B05F TaLr1 Triticum aestivum cDNA clone TaLr1148B05 3',
mRNA sequence
Length = 585
Score = 95.6 bits (48), Expect = 6e-018
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 455 tgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaa 514
|||||| ||| ||||||||||||||||| || |||||||| ||||||| | | ||| |
Sbjct: 337 tgcactggtaccggcagttggtctgctggtccgcgaagaatggccagctgatgacgggca 396
Query: 515 cgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacaccccca 574
|||||||||| || ||||||||||| |||||||| ||| ||||||||||||| | ||||
Sbjct: 397 cgccgccgcatatgctctccagcgtcgagttccagccgctgtgcgtcaggaacgcgccca 456
Query: 575 cggc 578
||||
Sbjct: 457 cggc 460
>gb|BG908180.1|BG908180 TaLr1166B10F TaLr1 Triticum aestivum cDNA clone TaLr1166B10 3',
mRNA sequence
Length = 572
Score = 95.6 bits (48), Expect = 6e-018
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 455 tgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaa 514
|||||| ||| ||||||||||||||||| || |||||||| ||||||| | | ||| |
Sbjct: 325 tgcactggtaccggcagttggtctgctggtccgcgaagaatggccagctgatgacgggca 384
Query: 515 cgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacaccccca 574
|||||||||| || ||||||||||| |||||||| ||| ||||||||||||| | ||||
Sbjct: 385 cgccgccgcatatgctctccagcgtcgagttccagccgctgtgcgtcaggaacgcgccca 444
Query: 575 cggc 578
||||
Sbjct: 445 cggc 448
>gb|CD873775.1|CD873775 AZO3.100K08F010925 AZO3 Triticum aestivum cDNA clone AZO3100K08,
mRNA sequence
Length = 577
Score = 95.6 bits (48), Expect = 6e-018
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 455 tgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaa 514
|||||| ||| ||||||||||||||||| || |||||||| ||||||| | | ||| |
Sbjct: 241 tgcactggtaccggcagttggtctgctggtccgcgaagaatggccagctgatgacgggca 182
Query: 515 cgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacaccccca 574
|||||||||| || ||||||||||| |||||||| ||| ||||||||||||| | ||||
Sbjct: 181 cgccgccgcatatgctctccagcgtcgagttccagccgctgtgcgtcaggaacgcgccca 122
Query: 575 cggc 578
||||
Sbjct: 121 cggc 118
>gb|CK199611.1|CK199611 FGAS008114 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 844
Score = 91.7 bits (46), Expect = 1e-016
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtatgagcgactctacctcgcccc 412
|||||||| |||| | |||||||||||||||||||||||| | | ||| |||||| ||
Sbjct: 385 gcatctctcgcccctgctccccctccatggcctcccgtatcatggcctccacctcggtcc 444
Query: 413 gctgtacatcgtcaccgatctcttttccgatgccccactcggtgcacttgtatcggcagt 472
| || ||||| || ||||| | |||||||||||||| || |||||| | |||||||
Sbjct: 445 tcctcacgtcgtccccaatctccatcccgatgccccactccgtacacttgaaacggcagt 504
Query: 473 tggtctgctgctcggcgaagaagggc 498
||||||||||||| ||||||||||||
Sbjct: 505 tggtctgctgctccgcgaagaagggc 530
Score = 42.1 bits (21), Expect = 0.079
Identities = 73/89 (82%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 547 cacccggagtgcgtcaggaacacccccacggcatcatgctccagcacagctgcctgcggg 606
||||| ||||| || ||||||||||| ||||| || || |||||||| | |||||||
Sbjct: 578 cacccagagtgtgtgaggaacacccctacggcctcgtgttccagcacctcctgctgcggg 637
Query: 607 caccacgtagacagcatgcttcgtccctc 635
|| ||||| ||||||||||| || |||||
Sbjct: 638 ca-cacgtcgacagcatgctccgcccctc 665
>gb|CV779558.1|CV779558 FGAS073967 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 865
Score = 91.7 bits (46), Expect = 1e-016
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 727 ttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccg 786
||||||||||||||||||||||| |||||||||||||||| ||| || |||||||| |||
Sbjct: 559 ttggccagcccccacgcgaactccaccagctgctcgttggtcatgacggtgatgctgccg 500
Query: 787 aagttgacatacacaacggagc 808
||||| | ||||| |||||||
Sbjct: 499 aagttcgcgtacacgacggagc 478
>gb|CA698899.1|CA698899 wlk8.pk0009.g8 wlk8 Triticum aestivum cDNA clone wlk8.pk0009.g8 5'
end, mRNA sequence
Length = 656
Score = 89.7 bits (45), Expect = 4e-016
Identities = 108/129 (83%)
Strand = Plus / Minus
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
|||||||| ||||| |||||||| ||||||||||| || | |||||| ||||||| |
Sbjct: 315 tggagcggccccactgtgtagataggcggcaggagtttggacatggcgtcgagcaggggt 256
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgccctccgtc 1038
| ||||||||||| | |||||||||||||||||||| ||||| |||||| || |||||
Sbjct: 255 gattcgagctcgtcccatgtgttgatgaccaccgccgaggcctgtgacatggccgccgtc 196
Query: 1039 tcacggacg 1047
||| |||||
Sbjct: 195 tcatggacg 187
Score = 67.9 bits (34), Expect = 1e-009
Identities = 90/108 (83%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 766 gacatcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttg 825
||||||||||||||||||||||| |||| || | || |||| ||||| |||| || |
Sbjct: 470 gacatcaccgtgatgctcccgaaattgagttagcccactgagcacggcggccggcngtcg 411
Query: 826 agccaccgga-gcggcgcctcctgctccttccacaggttggacccaat 872
| ||||| || | ||||| |||||||||| ||||||||||||||||||
Sbjct: 410 anccacccgaaggggcgcgtcctgctcctgccacaggttggacccaat 363
>gb|CK207680.1|CK207680 FGAS019331 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1085
Score = 89.7 bits (45), Expect = 4e-016
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 466 cggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgccgccgcaa 525
||||||||||||||||||||||||||||||||||||| |||||| || | ||| |||
Sbjct: 439 cggcagttggtctgctgctcggcgaagaagggccagcccagcatcggcagcccggcgctg 498
Query: 526 atactctccagcgtggagttccacccggagtgcgtcaggaa 566
| | ||||| | |||||||||||||| |||||||||||||
Sbjct: 499 agcccctccatcatggagttccacccgtagtgcgtcaggaa 539
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 704 tccataggaagtagtagccggtgttggccagcccccacgcgaactcgaccagct 757
|||| ||||||| ||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 674 tccagaggaagtcgtagccgcagttggccagcccccaggcgaactccaccagct 727
>gb|DR736708.1|DR736708 FGAS082078 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1051
Score = 89.7 bits (45), Expect = 4e-016
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 466 cggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgccgccgcaa 525
||||||||||||||||||||||||||||||||||||| |||||| || | ||| |||
Sbjct: 698 cggcagttggtctgctgctcggcgaagaagggccagcccagcatcggcagcccggcgctg 639
Query: 526 atactctccagcgtggagttccacccggagtgcgtcaggaa 566
| | ||||| | |||||||||||||| |||||||||||||
Sbjct: 638 agcccctccatcatggagttccacccgtagtgcgtcaggaa 598
Score = 61.9 bits (31), Expect = 9e-008
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 704 tccataggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgt 763
|||| ||||||| ||||||| ||||||||||||||| |||||||| ||||||| |
Sbjct: 463 tccagaggaagtcgtagccgcagttggccagcccccaggcgaactccaccagctcaaggc 404
Query: 764 tggacatcaccgtgatgctcccgaagttgacatacacaacgga 806
||| ||| |||||||||||||||||||| ||||| |||||
Sbjct: 403 tggtcatggtggtgatgctcccgaagttgacgtacaccacgga 361
>gb|BJ244644.1|BJ244644 BJ244644 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf15o04 5', mRNA sequence
Length = 542
Score = 87.7 bits (44), Expect = 1e-015
Identities = 107/128 (83%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 455 ccgacgccccactccatgcacgcgtatcggcagttggtctgctgctcggcgaagaaaggc 396
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|| || |||||||| || ||| ||| | | ||||| | | ||||||||||| |||||
Sbjct: 395 caacatagcatgggcaccccggcgctgagcccctccatcatcgagttccacccacagtgc 336
Query: 559 gtcaggaa 566
||||||||
Sbjct: 335 gtcaggaa 328
Score = 60.0 bits (30), Expect = 3e-007
Identities = 87/106 (82%)
Strand = Plus / Minus
Query: 704 tccataggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgt 763
|||| ||||||| |||||| |||||| |||||||| |||||||| ||||||| || |
Sbjct: 193 tccacaggaagtcgtagccacagttggcaagcccccaagcgaactccaccagctcctgct 134
Query: 764 tggacatcaccgtgatgctcccgaagttgacatacacaacggagcg 809
||||||| || | ||||||| ||||||||||||| ||||||||
Sbjct: 133 tggacatggtggttacgctcccgtagttgacatacaccacggagcg 88
>gb|BJ250503.1|BJ250503 BJ250503 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf15o04 3', mRNA sequence
Length = 684
Score = 87.7 bits (44), Expect = 1e-015
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 298 ccgacgccccactccatgcacgcgtatcggcagttggtctgctgctcggcgaagaaaggc 357
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|| || |||||||| || ||| ||| | | ||||| | | ||||||||||| |||||
Sbjct: 358 caacatagcatgggcaccccggcgctgagcccctccatcatcgagttccacccacagtgc 417
Query: 559 gtcaggaa 566
||||||||
Sbjct: 418 gtcaggaa 425
Score = 60.0 bits (30), Expect = 3e-007
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 704 tccataggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgt 763
|||| ||||||| |||||| |||||| |||||||| |||||||| ||||||| || |
Sbjct: 560 tccacaggaagtcgtagccacagttggcaagcccccaagcgaactccaccagctcctgct 619
Query: 764 tggacatcaccgtgatgctcccgaagttgacatacacaacggagcg 809
||||||| || | ||||||| ||||||||||||| ||||||||
Sbjct: 620 tggacatggtggttacgctcccgtagttgacatacaccacggagcg 665
>gb|BQ161855.1|BQ161855 WHE0483-0486_J24_J24ZT Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0483-0486_J24_J24, mRNA sequence
Length = 657
Score = 87.7 bits (44), Expect = 1e-015
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 331 ccgacgccccactccatgcacgcgtatcggcagttggtctgctgctcggcgaagaaaggc 390
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|| || |||||||| || ||| ||| | | ||||| | | ||||||||||| |||||
Sbjct: 391 caacatagcatgggcaccccggcgctgagcccctccatcatcgagttccacccacagtgc 450
Query: 559 gtcaggaa 566
||||||||
Sbjct: 451 gtcaggaa 458
>gb|CK163693.1|CK163693 FGAS016323 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1081
Score = 87.7 bits (44), Expect = 1e-015
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 720 gccggtgttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgat 779
|||| ||||||| ||||||||||||||||| |||||||||||| ||| ||| || |||
Sbjct: 257 gccgctgttggctagcccccacgcgaactccaccagctgctcgctggtcatgacgacgat 198
Query: 780 gctcccgaagttgacatacacaacggag 807
||||||||||||||| ||||| ||||||
Sbjct: 197 gctcccgaagttgacgtacacgacggag 170
Score = 65.9 bits (33), Expect = 5e-009
Identities = 105/129 (81%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||||| ||| | |||||||||||| || ||| |||||||||||
Sbjct: 535 ccgacgccccactctttgcactggtacctgcagttggtctgttggtcgccgaagaagggc 476
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|| | | | ||| ||||||||||| || |||||||| || |||||||| || ||||
Sbjct: 475 caactgatgacgggcacgccgccgcacatgctctccagtgtcgagttccagccactgtgc 416
Query: 559 gtcaggaac 567
|||||||||
Sbjct: 415 gtcaggaac 407
>gb|CK163712.1|CK163712 FGAS016342 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1115
Score = 87.7 bits (44), Expect = 1e-015
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 720 gccggtgttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgat 779
|||| ||||||| ||||||||||||||||| |||||||||||| ||| ||| || |||
Sbjct: 253 gccgctgttggctagcccccacgcgaactccaccagctgctcgctggtcatgacgacgat 194
Query: 780 gctcccgaagttgacatacacaacggag 807
||||||||||||||| ||||| ||||||
Sbjct: 193 gctcccgaagttgacgtacacgacggag 166
Score = 65.9 bits (33), Expect = 5e-009
Identities = 105/129 (81%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||||| ||| | |||||||||||| || ||| |||||||||||
Sbjct: 531 ccgacgccccactctttgcactggtacctgcagttggtctgttggtcgccgaagaagggc 472
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|| | | | ||| ||||||||||| || |||||||| || |||||||| || ||||
Sbjct: 471 caactgatgacgggcacgccgccgcacatgctctccagtgtcgagttccagccactgtgc 412
Query: 559 gtcaggaac 567
|||||||||
Sbjct: 411 gtcaggaac 403
>emb|AJ438331.1|TAE438331 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt3i11b
Length = 922
Score = 87.7 bits (44), Expect = 1e-015
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 720 gccggtgttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgat 779
|||| ||||||| ||||||||||||||||| |||||||||||| ||| ||| || |||
Sbjct: 683 gccgctgttggctagcccccacgcgaactccaccagctgctcgctggtcatgacgacgat 624
Query: 780 gctcccgaagttgacatacacaacggag 807
||||||||||||||| ||||| ||||||
Sbjct: 623 gctcccgaagttgacgtacacgacggag 596
>emb|AJ438332.1|TAE438332 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt3i11e
Length = 922
Score = 87.7 bits (44), Expect = 1e-015
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 720 gccggtgttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgat 779
|||| ||||||| ||||||||||||||||| |||||||||||| ||| ||| || |||
Sbjct: 683 gccgctgttggctagcccccacgcgaactccaccagctgctcgctggtcatgacgacgat 624
Query: 780 gctcccgaagttgacatacacaacggag 807
||||||||||||||| ||||| ||||||
Sbjct: 623 gctcccgaagttgacgtacacgacggag 596
>emb|AJ438336.1|TAE438336 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt4i13e
Length = 592
Score = 87.7 bits (44), Expect = 1e-015
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 720 gccggtgttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgat 779
|||| ||||||| ||||||||||||||||| |||||||||||| ||| ||| || |||
Sbjct: 352 gccgctgttggctagcccccacgcgaactccaccagctgctcgctggtcatgacgacgat 293
Query: 780 gctcccgaagttgacatacacaacggag 807
||||||||||||||| ||||| ||||||
Sbjct: 292 gctcccgaagttgacgtacacgacggag 265
Score = 52.0 bits (26), Expect = 8e-005
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 477 ctgctgctcggcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccag 536
|||||| ||| ||||||||||||||| | | ||| ||||||||||| || ||||||||
Sbjct: 592 ctgctggtcgccgaagaagggccagctgatgacgggcacgccgccgcacatgctctccag 533
Query: 537 cgtggagttccacccggagtgcgtcaggaa 566
|| |||||||| || ||||||||||||
Sbjct: 532 tgtcgagttccagccactgtgcgtcaggaa 503
>emb|AJ438330.1|TAE438330 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt3i11a
Length = 922
Score = 83.8 bits (42), Expect = 2e-014
Identities = 117/142 (82%)
Strand = Plus / Minus
Query: 720 gccggtgttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgat 779
|||| ||||||||||||||||||||||||| |||||||| ||||||| ||| || |||
Sbjct: 683 gccgctgttggccagcccccacgcgaactccaccagctgttcgttggtcatgacgacgat 624
Query: 780 gctcccgaagttgacatacacaacggagcgcggcgcacggccgttgagccaccggagcgg 839
|||||| |||||||| || || |||||| |||| | ||| | ||||||| ||||
Sbjct: 623 gctcccaaagttgacgtaaacgacggaggccggctccttgccttggagccactggaggca 564
Query: 840 cgcctcctgctccttccacagg 861
| ||||||||||||||||||||
Sbjct: 563 ctcctcctgctccttccacagg 542
Score = 40.1 bits (20), Expect = 0.31
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 477 ctgctgctcggcgaagaagggcca 500
|||||| |||||||||||||||||
Sbjct: 922 ctgctgatcggcgaagaagggcca 899
>gb|BQ161980.1|BQ161980 WHE0488_G12_M24ZT Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0488_G12_M24,
mRNA sequence
Length = 675
Score = 81.8 bits (41), Expect = 9e-014
Identities = 89/105 (84%)
Strand = Plus / Plus
Query: 462 gtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgccgcc 521
||||||||||||||||||||||||||||||||| ||||| || |||||||| || ||| |
Sbjct: 362 gtatcggcagttggtctgctgctcggcgaagaaaggccaacatagcatgggcaccccggc 421
Query: 522 gcaaatactctccagcgtggagttccacccggagtgcgtcaggaa 566
|| | | ||||| | | ||||||||||| |||||||||||||
Sbjct: 422 gctgagcccctccatcatcgagttccacccacagtgcgtcaggaa 466
>gb|BG905076.1|BG905076 TaLr1137A11F TaLr1 Triticum aestivum cDNA clone TaLr1137A11 3',
mRNA sequence
Length = 561
Score = 79.8 bits (40), Expect = 4e-013
Identities = 106/128 (82%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 321 ccgacgccccactccatgcacgcgtatcggcagttggtctgctgctcggcgaagaaaggc 380
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|| | |||||||| || ||| ||| | | ||||| | | ||||||||||| |||||
Sbjct: 381 caatatagcatgggcaccccggcgctgagcccctccatcatcgagttccacccacagtgc 440
Query: 559 gtcaggaa 566
||||||||
Sbjct: 441 gtcaggaa 448
>gb|AL824774.1|AL824774 AL824774 p:234 Triticum aestivum cDNA clone E10_p234_plate_2, mRNA
sequence
Length = 451
Score = 77.8 bits (39), Expect = 1e-012
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 730 gccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaag 789
|||||||||||||||||||| |||| |||| || ||| ||| || |||||||| ||||||
Sbjct: 233 gccagcccccacgcgaactccaccatctgcgcgctggtcatgacggtgatgctgccgaag 174
Query: 790 ttgacatacacaacggagc 808
||||| ||||| |||||||
Sbjct: 173 ttgacgtacacgacggagc 155
>gb|CA720937.1|CA720937 wkm2n.pk008.h12 wkm2n Triticum aestivum cDNA clone wkm2n.pk008.h12
5' end, mRNA sequence
Length = 308
Score = 75.8 bits (38), Expect = 6e-012
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 471 gttggtctgctgctcggcgaagaagggccagcacagcatggg 512
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 203 gttggtctgctgctcggcgaagaagggccagcagagcatggg 162
>gb|CD882945.1|CD882945 F1.111M04F010502 F1 Triticum aestivum cDNA clone F1111M04, mRNA
sequence
Length = 735
Score = 75.8 bits (38), Expect = 6e-012
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| |||||||||| |||||| ||| | ||||||||||||||| ||||||||||| |||
Sbjct: 304 ccgacgccccactcgttgcactggtacctgcagttggtctgctggtcggcgaagaacggc 245
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttcca 548
|||| | || || ||||||||||| | |||||||||| ||||||||
Sbjct: 244 cagctgatcaccggcacgccgccgcacaagctctccagcgccgagttcca 195
>gb|AJ610074.1|AJ610074 AJ610074 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 01345R, mRNA
sequence
Length = 412
Score = 75.8 bits (38), Expect = 6e-012
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 727 ttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccg 786
|||||||||||||| || ||||| |||||||||||||||| ||| || |||||||| ||
Sbjct: 219 ttggccagcccccaggcaaactctaccagctgctcgttggtcatgacggtgatgctgcca 160
Query: 787 aagttgacatacac 800
|||||||| |||||
Sbjct: 159 aagttgacgtacac 146
>emb|AJ438333.1|TAE438333 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt4i13b
Length = 583
Score = 75.8 bits (38), Expect = 6e-012
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 730 gccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaag 789
|||| ||||||||||||||| |||| |||| |||||| ||| || |||||||| ||||||
Sbjct: 333 gccaacccccacgcgaactccaccatctgcgcgttggtcatgacggtgatgctgccgaag 274
Query: 790 ttgacatacacaacggag 807
||||| ||||| ||||||
Sbjct: 273 ttgacgtacacgacggag 256
Score = 40.1 bits (20), Expect = 0.31
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 842 cctcctgctccttccacagg 861
||||||||||||||||||||
Sbjct: 221 cctcctgctccttccacagg 202
>emb|AJ438335.1|TAE438335 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt4i13c
Length = 583
Score = 75.8 bits (38), Expect = 6e-012
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 730 gccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaag 789
|||| ||||||||||||||| |||| |||| |||||| ||| || |||||||| ||||||
Sbjct: 333 gccaacccccacgcgaactccaccatctgcgcgttggtcatgacggtgatgctgccgaag 274
Query: 790 ttgacatacacaacggag 807
||||| ||||| ||||||
Sbjct: 273 ttgacgtacacgacggag 256
Score = 40.1 bits (20), Expect = 0.31
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 842 cctcctgctccttccacagg 861
||||||||||||||||||||
Sbjct: 221 cctcctgctccttccacagg 202
>gb|BQ169201.1|BQ169201 WHE2162_E06_J12ZT Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2162_E06_J12, mRNA sequence
Length = 718
Score = 71.9 bits (36), Expect = 9e-011
Identities = 93/112 (83%)
Strand = Plus / Plus
Query: 455 tgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaa 514
|||||| ||| || |||||||||||||| || ||||||| ||||||| || | ||| |
Sbjct: 407 tgcactggtaccgacagttggtctgctggtccccgaagaatggccagctcatgacgggca 466
Query: 515 cgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaa 566
|||| ||||| || ||||||||||| |||||||| ||| ||||||||||||
Sbjct: 467 cgccaccgcacatgctctccagcgtcgagttccagccgctgtgcgtcaggaa 518
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 730 gccagcccccacgcgaactcgaccagctgctcgttgg 766
|||||||||||||| ||||| ||||||||||||||||
Sbjct: 677 gccagcccccacgcaaactccaccagctgctcgttgg 713
>gb|CA658631.1|CA658631 wlm0.pk042.c16 wlm0 Triticum aestivum cDNA clone wlm0.pk042.c16 5'
end, mRNA sequence
Length = 513
Score = 71.9 bits (36), Expect = 9e-011
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 725 tgttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcc 784
|||||| ||||||||||||||||| ||||| || ||||||| ||| || ||||||||
Sbjct: 349 tgttggntagcccccacgcgaactccaccagttgttcgttggtcatgacgacgatgctcc 290
Query: 785 cgaagttgacatacacaacggag 807
|||||||||| ||||| ||||||
Sbjct: 289 cgaagttgacgtacacgacggag 267
>gb|CD872989.1|CD872989 AZO2.122B21F010208 AZO2 Triticum aestivum cDNA clone AZO2122B21,
mRNA sequence
Length = 630
Score = 71.9 bits (36), Expect = 9e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 466 cggcagttggtctgctgctcggcgaagaagggccagcacagcat 509
|||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 532 cggcagttggtctgctgctccgcgaagaagggccagcccagcat 489
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 704 tccataggaagtagtagccggtgttggccagcccccacgcgaactcgaccagct 757
|||||||||||| ||||||| |||||||| |||||| |||||||| |||||||
Sbjct: 297 tccataggaagtcgtagccgcagttggccaacccccaagcgaactccaccagct 244
>gb|CD872990.1|CD872990 AZO2.122B21R010405 AZO2 Triticum aestivum cDNA clone AZO2122B21,
mRNA sequence
Length = 795
Score = 71.9 bits (36), Expect = 9e-011
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 466 cggcagttggtctgctgctcggcgaagaagggccagcacagcat 509
|||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 359 cggcagttggtctgctgctccgcgaagaagggccagcccagcat 402
Score = 52.0 bits (26), Expect = 8e-005
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 704 tccataggaagtagtagccggtgttggccagcccccacgcgaactcgaccagct 757
|||||||||||| ||||||| ||||| || |||||| |||||||| |||||||
Sbjct: 594 tccataggaagtcgtagccgcagttggacaacccccaagcgaactccaccagct 647
>gb|CD871772.1|CD871772 AZO2.119A15F010207 AZO2 Triticum aestivum cDNA clone AZO2119A15,
mRNA sequence
Length = 617
Score = 69.9 bits (35), Expect = 3e-010
Identities = 101/123 (82%)
Strand = Plus / Minus
Query: 683 tgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccccacg 742
||||||||||||| || |||||||||| ||| ||||||| ||| |||||||||||||
Sbjct: 483 tgacgaggtccggccggacgttccatatgaacgtgtagccgctgtcggccagcccccacc 424
Query: 743 cgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacacaa 802
||| ||| | ||||||||||| | |||||| | || ||| ||| ||||||| ||||| |
Sbjct: 423 cgagctccaggagctgctcgttcgtcatcacggcgacgcttccgtagttgacgtacacga 364
Query: 803 cgg 805
|||
Sbjct: 363 cgg 361
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 550 ccggagtgcgtcaggaacaccc 571
||||||||||||||||||||||
Sbjct: 614 ccggagtgcgtcaggaacaccc 593
>emb|AJ438338.1|TAE438338 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt1i15e
Length = 601
Score = 69.9 bits (35), Expect = 3e-010
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 704 tccataggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgt 763
|||| ||||||| ||||||| ||||||||||||||| |||||||||||||||| |
Sbjct: 377 tccacaggaagtcgtagccgcagttggccagcccccaggcgaactcgaccagctcaaggc 318
Query: 764 tggacatcaccgtgatgctcccgaagttgacatacacaacgga 806
||| ||| |||||||||||||||||||| ||||| |||||
Sbjct: 317 tggtcatggtggtgatgctcccgaagttgacgtacaccacgga 275
Score = 58.0 bits (29), Expect = 1e-006
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 477 ctgctgctcggcgaagaagggccagcacagcat 509
|||||||||||||||||||||||||| ||||||
Sbjct: 601 ctgctgctcggcgaagaagggccagcccagcat 569
>gb|BE403570.1|BE403570 WHE0434_B08_C16ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0434_B08_C16, mRNA
sequence
Length = 369
Score = 65.9 bits (33), Expect = 5e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 466 cggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgcc 518
|||| |||||||||||| |||||||||||||||||||||| ||| || |||||
Sbjct: 278 cggctgttggtctgctggtcggcgaagaagggccagcacaccatcggcacgcc 226
>gb|BE403580.1|BE403580 WHE0434_C08_E16ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0434_C08_E16, mRNA
sequence
Length = 688
Score = 65.9 bits (33), Expect = 5e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 466 cggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgcc 518
|||| |||||||||||| |||||||||||||||||||||| ||| || |||||
Sbjct: 346 cggctgttggtctgctggtcggcgaagaagggccagcacaccatcggcacgcc 294
>gb|CA684187.1|CA684187 wlm96.pk026.g21 wlm96 Triticum aestivum cDNA clone wlm96.pk026.g21
5' end, mRNA sequence
Length = 510
Score = 63.9 bits (32), Expect = 2e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| |||||||||| |||||| ||| | ||||||||||||||| || |||||||| |||
Sbjct: 320 ccgacgccccactcgttgcactggtacctgcagttggtctgctggtccgcgaagaatggc 379
Query: 499 cagc 502
||||
Sbjct: 380 cagc 383
>gb|CA691407.1|CA691407 wlm96.pk049.l3 wlm96 Triticum aestivum cDNA clone wlm96.pk049.l3 5'
end, mRNA sequence
Length = 471
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagc 502
|||||||||| |||||| ||| | ||||||||||||||| || |||||||| |||||||
Sbjct: 293 gccccactcgttgcactggtacctgcagttggtctgctggtctgcgaagaatggccagc 351
>gb|BM137722.1|BM137722 WHE0483-0486_J24_J24ZS Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0483-0486_J24_J24, mRNA sequence
Length = 369
Score = 60.0 bits (30), Expect = 3e-007
Identities = 87/106 (82%)
Strand = Plus / Minus
Query: 704 tccataggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgt 763
|||| ||||||| |||||| |||||| |||||||| |||||||| ||||||| || |
Sbjct: 313 tccacaggaagtcgtagccacagttggcaagcccccaagcgaactccaccagctcctgct 254
Query: 764 tggacatcaccgtgatgctcccgaagttgacatacacaacggagcg 809
||||||| || | ||||||| ||||||||||||| ||||||||
Sbjct: 253 tggacatggtggttacgctcccgtagttgacatacaccacggagcg 208
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 228,783
Number of Sequences: 636343
Number of extensions: 228783
Number of successful extensions: 64252
Number of sequences better than 0.5: 100
Number of HSP's better than 0.5 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63959
Number of HSP's gapped (non-prelim): 268
length of query: 1086
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1066
effective length of database: 354,513,379
effective search space: 377911262014
effective search space used: 377911262014
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)