BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2568371.2.1
(782 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ277759.1|BJ277759 BJ277759 Y. Ogihara unpublished cDNA... 335 3e-090
gb|BQ578610.1|BQ578610 WHE0307_E11_J21ZS Wheat unstressed s... 319 2e-085
gb|CK214519.1|CK214519 FGAS026446 Triticum aestivum FGAS: L... 319 2e-085
gb|CA709780.1|CA709780 wdk2c.pk013.l9 wdk2c Triticum aestiv... 315 3e-084
gb|BJ219357.1|BJ219357 BJ219357 Y. Ogihara unpublished cDNA... 311 4e-083
gb|BJ321571.1|BJ321571 BJ321571 Y. Ogihara unpublished cDNA... 311 4e-083
gb|CA601278.1|CA601278 wl1.pk0011.e7 wl1 Triticum aestivum ... 311 4e-083
gb|CD939844.1|CD939844 OV.115H07F010313 OV Triticum aestivu... 311 4e-083
gb|BQ902843.1|BQ902843 Ta03_02c11_R Ta03_AAFC_ECORC_Fusariu... 295 2e-078
gb|BJ265369.1|BJ265369 BJ265369 Y. Ogihara unpublished cDNA... 262 3e-068
gb|CA606671.1|CA606671 wr1.pk0070.a10 wr1 Triticum aestivum... 228 5e-058
gb|BJ276952.1|BJ276952 BJ276952 Y. Ogihara unpublished cDNA... 220 1e-055
gb|CA618417.1|CA618417 wl1n.pk0033.e7 wl1n Triticum aestivu... 214 7e-054
gb|CA645096.1|CA645096 wre1n.pk0087.d11 wre1n Triticum aest... 204 7e-051
gb|CA653633.1|CA653633 wre1n.pk191.f4 wre1n Triticum aestiv... 204 7e-051
gb|CA611657.1|CA611657 wr1.pk0128.d11 wr1 Triticum aestivum... 178 4e-043
gb|CA651158.1|CA651158 wre1n.pk175.e6 wre1n Triticum aestiv... 178 4e-043
gb|BJ282951.1|BJ282951 BJ282951 Y. Ogihara unpublished cDNA... 174 6e-042
gb|BJ295702.1|BJ295702 BJ295702 Y. Ogihara unpublished cDNA... 163 2e-038
gb|BJ289375.1|BJ289375 BJ289375 Y. Ogihara unpublished cDNA... 149 3e-034
gb|CA654138.1|CA654138 wre1n.pk162.g6 wre1n Triticum aestiv... 145 5e-033
gb|BJ316080.1|BJ316080 BJ316080 Y. Ogihara unpublished cDNA... 141 8e-032
gb|BQ838493.1|BQ838493 WHE2911_B06_D11ZS Wheat aluminum-str... 139 3e-031
gb|CA601063.1|CA601063 wl1.pk0008.e10 wl1 Triticum aestivum... 131 8e-029
gb|CA630927.1|CA630927 wle1n.pk0039.g8 wle1n Triticum aesti... 113 2e-023
gb|CA644114.1|CA644114 wre1n.pk0067.f11 wre1n Triticum aest... 90 3e-016
gb|BJ318706.1|BJ318706 BJ318706 Y. Ogihara unpublished cDNA... 86 4e-015
gb|CD931463.1|CD931463 GR45.114J03R010613 GR45 Triticum aes... 84 2e-014
gb|CF133837.1|CF133837 WHE4364_C04_E08ZT Wheat meiotic flor... 84 2e-014
gb|BG607364.1|BG607364 WHE2471_F12_K23ZS Triticum monococcu... 76 4e-012
gb|BG608401.1|BG608401 WHE2498_H08_P16ZS Triticum monococcu... 76 4e-012
gb|BG607425.1|BG607425 WHE2479_E09_I17ZS Triticum monococcu... 74 2e-011
emb|AX756302.1| Sequence 1041 from Patent WO03000905 74 2e-011
gb|BQ237630.1|BQ237630 TaE05014D01F TaE05 Triticum aestivum... 72 6e-011
gb|BQ743340.1|BQ743340 WHE4102_H02_O04ZS Wheat salt-stresse... 68 1e-009
gb|CA598658.1|CA598658 wyr1c.pk002.h22 wyr1c Triticum aesti... 68 1e-009
gb|CA652128.1|CA652128 wre1n.pk178.g12 wre1n Triticum aesti... 68 1e-009
gb|CD929632.1|CD929632 GR45.108L13R010612 GR45 Triticum aes... 68 1e-009
gb|CK195305.1|CK195305 FGAS003744 Triticum aestivum FGAS: L... 68 1e-009
gb|BJ254056.1|BJ254056 BJ254056 Y. Ogihara unpublished cDNA... 66 4e-009
gb|BJ266003.1|BJ266003 BJ266003 Y. Ogihara unpublished cDNA... 66 4e-009
gb|BJ321461.1|BJ321461 BJ321461 Y. Ogihara unpublished cDNA... 66 4e-009
gb|BQ753218.1|BQ753218 WHE4124_D10_H20ZS Wheat salt-stresse... 66 4e-009
gb|CV066003.1|CV066003 WNEL29d6 Wheat EST endosperm library... 66 4e-009
gb|CD929631.1|CD929631 GR45.108L13F010413 GR45 Triticum aes... 58 1e-006
gb|CK194966.1|CK194966 FGAS003400 Triticum aestivum FGAS: L... 58 1e-006
gb|CD938838.1|CD938838 OV.111D10R010412 OV Triticum aestivu... 54 1e-005
gb|BQ237973.1|BQ237973 TaE05009H10F TaE05 Triticum aestivum... 52 6e-005
gb|CK160883.1|CK160883 FGAS042534 Triticum aestivum FGAS: T... 44 0.014
gb|AL829369.1|AL829369 AL829369 q:141 Triticum aestivum cDN... 42 0.057
gb|AJ613825.1|AJ613825 AJ613825 Triticum turgidum subsp. du... 42 0.057
gb|CA598457.1|CA598457 wyr1c.pk005.m15 wyr1c Triticum aesti... 40 0.22
>gb|BJ277759.1|BJ277759 BJ277759 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr12p06 5', mRNA sequence
Length = 634
Score = 335 bits (169), Expect = 3e-090
Identities = 199/209 (95%)
Strand = Plus / Plus
Query: 2 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggc 61
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 346 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtcgccggcggg 405
Query: 62 gtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctgggg 121
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 406 gtcttcttcaacttctgggtgctgttccacctctacccgttcgccaagggcatcctgggg 465
Query: 122 aggcacggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcacc 181
| |||||||||||| || || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 466 aagcacggcaagacgccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcacc 525
Query: 182 gccgtgctgtacatcaacataccccacat 210
|||||||| ||||||||||| ||||||||
Sbjct: 526 gccgtgctctacatcaacatcccccacat 554
>gb|BQ578610.1|BQ578610 WHE0307_E11_J21ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0307_E11_J21, mRNA
sequence
Length = 711
Score = 319 bits (161), Expect = 2e-085
Identities = 197/209 (94%)
Strand = Plus / Plus
Query: 2 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggc 61
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 419 gtggccttcgccaaggtgctcgacggcgagtggacgcactggctcaaggtcgccggcggg 478
Query: 62 gtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctgggg 121
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 479 gtcttcttcaacttctgggtgctgttccacctctacccgttcgccaaggggatcctgggg 538
Query: 122 aggcacggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcacc 181
| |||||||||||| || || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 539 aagcacggcaagacgccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcacc 598
Query: 182 gccgtgctgtacatcaacataccccacat 210
|||||||| ||||||||||| ||||||||
Sbjct: 599 gccgtgctctacatcaacatcccccacat 627
>gb|CK214519.1|CK214519 FGAS026446 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1139
Score = 319 bits (161), Expect = 2e-085
Identities = 197/209 (94%)
Strand = Plus / Minus
Query: 2 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggc 61
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 615 gtggccttcgccaaggtgctcgacggcgagtggacgcactggctcaaggtcgccggcggg 556
Query: 62 gtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctgggg 121
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 555 gtcttcttcaacttctgggtgctgttccacctctacccgttcgccaaggggatcctgggg 496
Query: 122 aggcacggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcacc 181
| |||||||||||| || || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 495 aagcacggcaagacgccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcacc 436
Query: 182 gccgtgctgtacatcaacataccccacat 210
|||||||| ||||||||||| ||||||||
Sbjct: 435 gccgtgctctacatcaacatcccccacat 407
>gb|CA709780.1|CA709780 wdk2c.pk013.l9 wdk2c Triticum aestivum cDNA clone wdk2c.pk013.l9 5'
end, mRNA sequence
Length = 457
Score = 315 bits (159), Expect = 3e-084
Identities = 189/199 (94%)
Strand = Plus / Plus
Query: 12 ccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggcgtcttcttca 71
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 1 ccaaggtgctggacggcgagtggacgcactggctcaaggtcgccggcggggtcttcttca 60
Query: 72 acttctgggtgctgttccacctctaccccttcgccaagggcatcctggggaggcacggca 131
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 61 acttctgggtgctgttccacctctacccgttcgccaagggcatcctggggaagcacggca 120
Query: 132 agacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcaccgccgtgctgt 191
|||| || || |||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 121 agacgccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcaccgccgtgctct 180
Query: 192 acatcaacataccccacat 210
|||||||||| ||||||||
Sbjct: 181 acatcaacatcccccacat 199
>gb|BJ219357.1|BJ219357 BJ219357 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh33o21 3', mRNA sequence
Length = 682
Score = 311 bits (157), Expect = 4e-083
Identities = 193/205 (94%)
Strand = Plus / Minus
Query: 6 ccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggcgtct 65
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 682 ccttcgccaaggtgctcgacggcgagtggacgcactggctcaaggtcgccggcggggtct 623
Query: 66 tcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctggggaggc 125
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||
Sbjct: 622 tcttcaacttctgggtgctgttccacctctacccgttcgccaaggggatcctggggaagc 563
Query: 126 acggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcaccgccg 185
|||||||||| || || |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 562 acggcaagacgccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcaccgccg 503
Query: 186 tgctgtacatcaacataccccacat 210
|||| ||||||||||| ||||||||
Sbjct: 502 tgctctacatcaacatcccccacat 478
>gb|BJ321571.1|BJ321571 BJ321571 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf21h08 3', mRNA sequence
Length = 646
Score = 311 bits (157), Expect = 4e-083
Identities = 190/201 (94%)
Strand = Plus / Minus
Query: 10 cgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggcgtcttctt 69
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 646 cgccaaggtgctcgacggcgagtggacgcactggctcaaggtcgccggcggcgtcttctt 587
Query: 70 caacttctgggtgctgttccacctctaccccttcgccaagggcatcctggggaggcacgg 129
||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 586 caacttctgggtgctcttccacctctacccgttcgccaagggcatcctggggaagcacgg 527
Query: 130 caagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcaccgccgtgct 189
|||||| || || |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 526 caagacgccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcaccgccgtgct 467
Query: 190 gtacatcaacataccccacat 210
||||||||||| ||||||||
Sbjct: 466 ctacatcaacatcccccacat 446
>gb|CA601278.1|CA601278 wl1.pk0011.e7 wl1 Triticum aestivum cDNA clone wl1.pk0011.e7 5'
end, mRNA sequence
Length = 533
Score = 311 bits (157), Expect = 4e-083
Identities = 193/205 (94%)
Strand = Plus / Plus
Query: 6 ccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggcgtct 65
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1 ccttcgccaaggtgctcgacggcgagtggacgcactggctcaaggtcgccggcggggtct 60
Query: 66 tcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctggggaggc 125
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||
Sbjct: 61 tcttcaacttctgggtgctgttccacctctacccgttcgccaaggggatcctggggaagc 120
Query: 126 acggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcaccgccg 185
|||||||||| || || |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 acggcaagacgccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcaccgccg 180
Query: 186 tgctgtacatcaacataccccacat 210
|||| ||||||||||| ||||||||
Sbjct: 181 tgctctacatcaacatcccccacat 205
>gb|CD939844.1|CD939844 OV.115H07F010313 OV Triticum aestivum cDNA clone OV115H07, mRNA
sequence
Length = 500
Score = 311 bits (157), Expect = 4e-083
Identities = 196/209 (93%)
Strand = Plus / Plus
Query: 2 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggc 61
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 182 gtggccttcgccaaggtgctcgacggcgagtggacgcactggctcaaagtcgccggcggg 241
Query: 62 gtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctgggg 121
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 242 gtcttcttcaacttctgggtgctgttccacctctacccgttcgccaaggggatcctgggg 301
Query: 122 aggcacggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcacc 181
| |||||||||||| || || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 302 aagcacggcaagacgccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcacc 361
Query: 182 gccgtgctgtacatcaacataccccacat 210
|||||||| ||||||||||| ||||||||
Sbjct: 362 gccgtgctctacatcaacatcccccacat 390
>gb|BQ902843.1|BQ902843 Ta03_02c11_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_02c11, mRNA
sequence
Length = 866
Score = 295 bits (149), Expect = 2e-078
Identities = 197/211 (93%), Gaps = 2/211 (0%)
Strand = Plus / Minus
Query: 2 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtg-gccggcgg 60
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 279 gtggccttcgccaaggtgctcgacggcgagtggacgcactggctcaaggttcgccggcgg 220
Query: 61 cgt-cttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctgg 119
||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 219 cgtgcttcttcaacttctgggtgctcttccacctctacccgttcgccaagggcatcctgg 160
Query: 120 ggaggcacggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatca 179
||| |||||||||||| || || |||||||||||||||||||| ||||| ||||||||||
Sbjct: 159 ggaagcacggcaagacgccagtcgtggtgctcgtctggtgggcattcacvttcgtcatca 100
Query: 180 ccgccgtgctgtacatcaacataccccacat 210
|||||||||| ||||||||||| ||||||||
Sbjct: 99 ccgccgtgctctacatcaacatcccccacat 69
>gb|BJ265369.1|BJ265369 BJ265369 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21l06 3', mRNA sequence
Length = 656
Score = 262 bits (132), Expect = 3e-068
Identities = 162/172 (94%)
Strand = Plus / Minus
Query: 39 actggctcaaggtggccggcggcgtcttcttcaacttctgggtgctgttccacctctacc 98
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 656 actggctcaaggtcgccggcggggtcttcttcaacttctgggtgctgttccacctctacc 597
Query: 99 ccttcgccaagggcatcctggggaggcacggcaagacccccgtggtggtgctcgtctggt 158
| |||||||||||||||||||||| |||||||||||| || || ||||||||||||||||
Sbjct: 596 cgttcgccaagggcatcctggggaagcacggcaagacgccagtcgtggtgctcgtctggt 537
Query: 159 gggccttcaccttcgtcatcaccgccgtgctgtacatcaacataccccacat 210
|||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 536 gggcattcaccttcgtcatcaccgccgtgctctacatcaacatcccccacat 485
>gb|CA606671.1|CA606671 wr1.pk0070.a10 wr1 Triticum aestivum cDNA clone wr1.pk0070.a10 5'
end, mRNA sequence
Length = 634
Score = 228 bits (115), Expect = 5e-058
Identities = 192/210 (91%), Gaps = 7/210 (3%)
Strand = Plus / Plus
Query: 2 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggc 61
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 222 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtcgccggcggg 281
Query: 62 gtcttcttcaacttctgggtgctgttccacctctaccccttcgcc-aagggcatcctggg 120
||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||
Sbjct: 282 gtcttcttcaacttctgggtgctgttccacctcta-ccgttcgccaaagggcatcctggg 340
Query: 121 gaggcacggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcac 180
| |||||||||| ||| | ||||||||||||||||||| |||| |||||||||||
Sbjct: 341 ggaacacggcaaga--cccatcgtggtgctcgtctggtggg-attca-cttcgtcatca- 395
Query: 181 cgccgtgctgtacatcaacataccccacat 210
||||||||| ||||||||||| ||||||||
Sbjct: 396 cgccgtgctctacatcaacatcccccacat 425
>gb|BJ276952.1|BJ276952 BJ276952 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh27e05 3', mRNA sequence
Length = 634
Score = 220 bits (111), Expect = 1e-055
Identities = 138/147 (93%)
Strand = Plus / Minus
Query: 64 cttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctggggag 123
||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 634 cttcttcaacttctgggtgctcttccacctctacccgttcgccaagggcatcctggggaa 575
Query: 124 gcacggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcaccgc 183
|||||||||||| || || |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 574 gcacggcaagacgccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcaccgc 515
Query: 184 cgtgctgtacatcaacataccccacat 210
|||||| ||||||||||| ||||||||
Sbjct: 514 cgtgctctacatcaacatcccccacat 488
>gb|CA618417.1|CA618417 wl1n.pk0033.e7 wl1n Triticum aestivum cDNA clone wl1n.pk0033.e7 5'
end, mRNA sequence
Length = 582
Score = 214 bits (108), Expect = 7e-054
Identities = 149/160 (93%), Gaps = 2/160 (1%)
Strand = Plus / Plus
Query: 2 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggc 61
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 229 gtggccttcgccaaggtgctcgacggcgagtggacgcactggctcaaggtcgccggcggg 288
Query: 62 gtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctgggg 121
|||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 289 gtcttcttcaacttctgggtgctgttccacctctacccgttcgccaaggggat-ctgggg 347
Query: 122 aggcacggcaagacccccgtggtggtgctcgtctggtggg 161
| ||||||||||| | | || |||||||||||||||||||
Sbjct: 348 aagcacggcaaga-cgcagtcgtggtgctcgtctggtggg 386
>gb|CA645096.1|CA645096 wre1n.pk0087.d11 wre1n Triticum aestivum cDNA clone
wre1n.pk0087.d11 5' end, mRNA sequence
Length = 508
Score = 204 bits (103), Expect = 7e-051
Identities = 127/135 (94%)
Strand = Plus / Plus
Query: 76 ctgggtgctgttccacctctaccccttcgccaagggcatcctggggaggcacggcaagac 135
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 1 ctgggtgctgttccacctctacccgttcgccaagggcatcctggggaagcacggcaagac 60
Query: 136 ccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcaccgccgtgctgtacat 195
|| || |||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 61 gccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcaccgccgtgctctacat 120
Query: 196 caacataccccacat 210
|||||| ||||||||
Sbjct: 121 caacatcccccacat 135
>gb|CA653633.1|CA653633 wre1n.pk191.f4 wre1n Triticum aestivum cDNA clone wre1n.pk191.f4 5'
end, mRNA sequence
Length = 512
Score = 204 bits (103), Expect = 7e-051
Identities = 127/135 (94%)
Strand = Plus / Plus
Query: 76 ctgggtgctgttccacctctaccccttcgccaagggcatcctggggaggcacggcaagac 135
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 1 ctgggtgctgttccacctctacccgttcgccaagggcatcctggggaagcacggcaagac 60
Query: 136 ccccgtggtggtgctcgtctggtgggccttcaccttcgtcatcaccgccgtgctgtacat 195
|| || |||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 61 gccagtcgtggtgctcgtctggtgggcattcaccttcgtcatcaccgccgtgctctacat 120
Query: 196 caacataccccacat 210
|||||| ||||||||
Sbjct: 121 caacatcccccacat 135
>gb|CA611657.1|CA611657 wr1.pk0128.d11 wr1 Triticum aestivum cDNA clone wr1.pk0128.d11 5'
end, mRNA sequence
Length = 600
Score = 178 bits (90), Expect = 4e-043
Identities = 143/158 (90%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 2 gtggccttcgccaaggtgctg-gacggcgagtggacgcactgg-ctcaaggtggccggcg 59
|||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||
Sbjct: 228 gtggccttcgccaaggtgctccgacggcgagtggacgcactgggctcaaggtcgccggcg 287
Query: 60 gcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctgg 119
||||||||||||||| ||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 288 gcgtcttcttcaactctggggtgctcttccaactctacccgttcgccaagggcatcctgg 347
Query: 120 ggaggcacggcaagacccccgtggtggtgctcgtctgg 157
||| |||||||||||| || | |||||||||||||||
Sbjct: 348 ggaagcacggcaagacgccaatcgtggtgctcgtctgg 385
>gb|CA651158.1|CA651158 wre1n.pk175.e6 wre1n Triticum aestivum cDNA clone wre1n.pk175.e6 5'
end, mRNA sequence
Length = 489
Score = 178 bits (90), Expect = 4e-043
Identities = 126/134 (94%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 2 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggc 61
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 185 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtcgccggcggg 244
Query: 62 gtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcctgggg 121
|||||||||||||||||||||||| |||| ||||| || ||| |||||||||||||||||
Sbjct: 245 gtcttcttcaacttctgggtgctg-tccaactcta-ccgttc-ccaagggcatcctgggg 301
Query: 122 aggcacggcaagac 135
| ||||||||||||
Sbjct: 302 aagcacggcaagac 315
>gb|BJ282951.1|BJ282951 BJ282951 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr12p06 3', mRNA sequence
Length = 690
Score = 174 bits (88), Expect = 6e-042
Identities = 112/120 (93%)
Strand = Plus / Minus
Query: 91 cctctaccccttcgccaagggcatcctggggaggcacggcaagacccccgtggtggtgct 150
||||||||| |||||||||||||||||||||| |||||||||||| || || ||||||||
Sbjct: 690 cctctacccgttcgccaagggcatcctggggaagcacggcaagacgccagtcgtggtgct 631
Query: 151 cgtctggtgggccttcaccttcgtcatcaccgccgtgctgtacatcaacataccccacat 210
|||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 630 cgtctggtgggcattcaccttcgtcatcaccgccgtgctctacatcaacatcccccacat 571
>gb|BJ295702.1|BJ295702 BJ295702 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl5a01 3', mRNA sequence
Length = 530
Score = 163 bits (82), Expect = 2e-038
Identities = 103/110 (93%)
Strand = Plus / Minus
Query: 101 ttcgccaagggcatcctggggaggcacggcaagacccccgtggtggtgctcgtctggtgg 160
|||||||||||||||||||||| |||||||||||| || || ||||||||||||||||||
Sbjct: 528 ttcgccaagggcatcctggggaagcacggcaagacgccagtcgtggtgctcgtctggtgg 469
Query: 161 gccttcaccttcgtcatcaccgccgtgctgtacatcaacataccccacat 210
|| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 468 gcattcaccttcgtcatcaccgccgtgctctacatcaacatcccccacat 419
>gb|BJ289375.1|BJ289375 BJ289375 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl5a01 5', mRNA sequence
Length = 474
Score = 149 bits (75), Expect = 3e-034
Identities = 96/103 (93%)
Strand = Plus / Plus
Query: 108 agggcatcctggggaggcacggcaagacccccgtggtggtgctcgtctggtgggccttca 167
||||||||||||||| |||||||||||| || || |||||||||||||||||||| ||||
Sbjct: 9 agggcatcctggggaagcacggcaagacgccagtcgtggtgctcgtctggtgggcattca 68
Query: 168 ccttcgtcatcaccgccgtgctgtacatcaacataccccacat 210
|||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 69 ccttcgtcatcaccgccgtgctctacatcaacatcccccacat 111
>gb|CA654138.1|CA654138 wre1n.pk162.g6 wre1n Triticum aestivum cDNA clone wre1n.pk162.g6 5'
end, mRNA sequence
Length = 276
Score = 145 bits (73), Expect = 5e-033
Identities = 111/124 (89%)
Strand = Plus / Plus
Query: 87 tccacctctaccccttcgccaagggcatcctggggaggcacggcaagacccccgtggtgg 146
||||||||||||| ||||||||||| |||||||||| |||||||||||| || || ||||
Sbjct: 1 tccacctctacccgttcgccaaggggatcctggggaagcacggcaagacgccagtcgtgg 60
Query: 147 tgctcgtctggtgggccttcaccttcgtcatcaccgccgtgctgtacatcaacatacccc 206
|||||||||||||||| |||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 61 tgctcgtctggtgggcattcaccttcgctacnaccgccgtgctctacatcaacatccccc 120
Query: 207 acat 210
||||
Sbjct: 121 acat 124
>gb|BJ316080.1|BJ316080 BJ316080 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf21h08 5', mRNA sequence
Length = 581
Score = 141 bits (71), Expect = 8e-032
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 2 gtggccttcgccaaggtgctggacggcgagtggacgcactggctcaaggtggccggcggc 61
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 503 gtggccttcgccaaggtgctcgacggcgagtggacgcactggctcaaggtcgccggcggc 562
Query: 62 gtcttcttcaacttctggg 80
|||||||||||||||||||
Sbjct: 563 gtcttcttcaacttctggg 581
>gb|BQ838493.1|BQ838493 WHE2911_B06_D11ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2911_B06_D11, mRNA
sequence
Length = 630
Score = 139 bits (70), Expect = 3e-031
Identities = 98/106 (92%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 106 caagggcatcctg-gggaggcacggcaagacccccgtggtggtgctcgtctggtgggcct 164
||||||||||||| |||| |||||||||||| || || |||||||||||||||||||| |
Sbjct: 5 caagggcatcctgtgggaagcacggcaagacgccagtcgtggtgctcgtctggtgggcat 64
Query: 165 tcaccttcgtcatcaccgccgtgctgtacatcaacataccccacat 210
||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 65 tcaccttcgtcatcaccgccgtgctctacatcaacatcccccacat 110
>gb|CA601063.1|CA601063 wl1.pk0008.e10 wl1 Triticum aestivum cDNA clone wl1.pk0008.e10 5'
end, mRNA sequence
Length = 376
Score = 131 bits (66), Expect = 8e-029
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 117 tggggaggcacggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtca 176
|||||| |||||||||||| || || |||||||||||||||||||| |||||||||||||
Sbjct: 1 tggggaagcacggcaagacgccagtcgtggtgctcgtctggtgggcattcaccttcgtca 60
Query: 177 tcaccgccgtgctgtacatcaacataccccacat 210
||||||||||||| ||||||||||| ||||||||
Sbjct: 61 tcaccgccgtgctctacatcaacatcccccacat 94
>gb|CA630927.1|CA630927 wle1n.pk0039.g8 wle1n Triticum aestivum cDNA clone wle1n.pk0039.g8
5' end, mRNA sequence
Length = 652
Score = 113 bits (57), Expect = 2e-023
Identities = 85/93 (91%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 119 gggaggcacggcaagacccccgtggtggtgctcgtctggtgggccttcaccttcgtcatc 178
|||| |||||||||||| || || |||||||||||||||||||| |||||||||||||||
Sbjct: 1 gggaagcacggcaagacgccagtcgtggtgctcgtctggtgggcattcaccttcgtcatc 60
Query: 179 -accgccgtgctgtacatcaacataccccacat 210
||||||||||| ||||||||||| ||||||||
Sbjct: 61 aaccgccgtgctctacatcaacatcccccacat 93
>gb|CA644114.1|CA644114 wre1n.pk0067.f11 wre1n Triticum aestivum cDNA clone
wre1n.pk0067.f11 5' end, mRNA sequence
Length = 591
Score = 89.7 bits (45), Expect = 3e-016
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 154 ctggtgggccttcaccttcgtcatcaccgccgtgctgtacatcaacataccccacat 210
||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 1 ctggtgggcattcaccttcgtcatcaccgccgtgctctacatcaacatcccccacat 57
>gb|BJ318706.1|BJ318706 BJ318706 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf12p04 3', mRNA sequence
Length = 480
Score = 85.7 bits (43), Expect = 4e-015
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 58 cggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatcct 117
||||| |||||||| |||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 338 cggcgccttcttcagcttctgggtgctgtgccacctctaccccttcgccaaggggctcct 279
Query: 118 ggg 120
|||
Sbjct: 278 ggg 276
>gb|CD931463.1|CD931463 GR45.114J03R010613 GR45 Triticum aestivum cDNA clone GR45114J03,
mRNA sequence
Length = 506
Score = 83.8 bits (42), Expect = 2e-014
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
||||||| |||||||| |||||||||||||| |||||||||||||||||||| |||| ||
Sbjct: 69 ggcggcgccttcttcagcttctgggtgctgtgccacctctaccccttcgccaggggc-tc 11
Query: 116 ctgggg 121
||||||
Sbjct: 10 ctgggg 5
>gb|CF133837.1|CF133837 WHE4364_C04_E08ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4364_C04_E08, mRNA sequence
Length = 613
Score = 83.8 bits (42), Expect = 2e-014
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
||||||| |||||||| |||||||||||||| |||||||||| ||||||||||||| ||
Sbjct: 544 ggcggcgccttcttcagcttctgggtgctgtgccacctctactccttcgccaaggggctc 603
Query: 116 ctgggg 121
||||||
Sbjct: 604 ctgggg 609
>gb|BG607364.1|BG607364 WHE2471_F12_K23ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2471_F12_K23,
mRNA sequence
Length = 533
Score = 75.8 bits (38), Expect = 4e-012
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
|||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||
Sbjct: 374 ggcggcgtcttcttcagcttctgggtgctggctcacctctacccgttcgccaagggcctc 433
Query: 116 ctgggg 121
|||||
Sbjct: 434 atgggg 439
>gb|BG608401.1|BG608401 WHE2498_H08_P16ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2498_H08_P16,
mRNA sequence
Length = 448
Score = 75.8 bits (38), Expect = 4e-012
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
|||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||
Sbjct: 10 ggcggcgtcttcttcagcttctgggtgctggctcacctctacccgttcgccaagggcctc 69
Query: 116 ctgggg 121
|||||
Sbjct: 70 atgggg 75
>gb|BG607425.1|BG607425 WHE2479_E09_I17ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2479_E09_I17,
mRNA sequence
Length = 373
Score = 73.8 bits (37), Expect = 2e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 166 caccttcgtcatcaccgccgtgctgtacatcaacataccccacat 210
|||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 1 caccttcgtcatcaccgccgtgctctacatcaacatcccccacat 45
>emb|AX756302.1| Sequence 1041 from Patent WO03000905
Length = 1423
Score = 73.8 bits (37), Expect = 2e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggc 112
|||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||
Sbjct: 1003 ggcggcgtcttcttcagcttctgggtgctggctcacctctacccgttcgccaagggc 1059
>gb|BQ237630.1|BQ237630 TaE05014D01F TaE05 Triticum aestivum cDNA clone TaE05014D01F, mRNA
sequence
Length = 488
Score = 71.9 bits (36), Expect = 6e-011
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaaggg 111
||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||
Sbjct: 70 ggcggcgccttcttcagcttctgggtgctgtgccacctcccccccttcgccaaggg 15
>gb|BQ743340.1|BQ743340 WHE4102_H02_O04ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4102_H02_O04, mRNA sequence
Length = 622
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
|||||||||||||||| ||||||||||||| ||||| ||||| |||||||||||| ||
Sbjct: 334 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaagggcctc 393
Query: 116 ctgggg 121
|||||
Sbjct: 394 atgggg 399
>gb|CA598658.1|CA598658 wyr1c.pk002.h22 wyr1c Triticum aestivum cDNA clone wyr1c.pk002.h22
5' end, mRNA sequence
Length = 607
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
|||||||||||||||| ||||||||||||| ||||| ||||| |||||||||||| ||
Sbjct: 159 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaagggcctc 218
Query: 116 ctgggg 121
|||||
Sbjct: 219 atgggg 224
>gb|CA652128.1|CA652128 wre1n.pk178.g12 wre1n Triticum aestivum cDNA clone wre1n.pk178.g12
5' end, mRNA sequence
Length = 494
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
|||||||||||||||| ||||||||||||| ||||| ||||| |||||||||||| ||
Sbjct: 89 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaagggcctc 148
Query: 116 ctgggg 121
|||||
Sbjct: 149 atgggg 154
>gb|CD929632.1|CD929632 GR45.108L13R010612 GR45 Triticum aestivum cDNA clone GR45108L13,
mRNA sequence
Length = 670
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
|||||||||||||||| ||||||||||||| ||||| ||||| |||||||||||| ||
Sbjct: 73 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaagggcctc 14
Query: 116 ctgggg 121
|||||
Sbjct: 13 atgggg 8
>gb|CK195305.1|CK195305 FGAS003744 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
|||||||||||||||| ||||||||||||| ||||| ||||| |||||||||||| ||
Sbjct: 615 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaagggcctc 674
Query: 116 ctgggg 121
|||||
Sbjct: 675 atgggg 680
>gb|BJ254056.1|BJ254056 BJ254056 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4e03 3', mRNA sequence
Length = 550
Score = 65.9 bits (33), Expect = 4e-009
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggc 112
|||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 323 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaagggc 267
>gb|BJ266003.1|BJ266003 BJ266003 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh24g14 3', mRNA sequence
Length = 599
Score = 65.9 bits (33), Expect = 4e-009
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggc 112
|||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 364 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaagggc 308
>gb|BJ321461.1|BJ321461 BJ321461 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf20p24 3', mRNA sequence
Length = 654
Score = 65.9 bits (33), Expect = 4e-009
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggc 112
|||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 420 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaagggc 364
>gb|BQ753218.1|BQ753218 WHE4124_D10_H20ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4124_D10_H20, mRNA sequence
Length = 675
Score = 65.9 bits (33), Expect = 4e-009
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggc 112
|||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 315 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaagggc 371
>gb|CV066003.1|CV066003 WNEL29d6 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL29d6 5' similar to Oryza sativa, mRNA sequence
Length = 464
Score = 65.9 bits (33), Expect = 4e-009
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggc 112
|||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 43 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaagggc 99
>gb|CD929631.1|CD929631 GR45.108L13F010413 GR45 Triticum aestivum cDNA clone GR45108L13,
mRNA sequence
Length = 744
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaa 108
|||||||||||||||| ||||||||||||| ||||| ||||| ||||||||
Sbjct: 692 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgccaa 744
>gb|CK194966.1|CK194966 FGAS003400 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 842
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaa 108
|||||||||||||||| ||||||||||||| ||||| ||||| ||||||||
Sbjct: 579 ggcggcgtcttcttcagcttctgggtgctgactcacctgtacccgttcgccaa 527
>gb|CD938838.1|CD938838 OV.111D10R010412 OV Triticum aestivum cDNA clone OV111D10, mRNA
sequence
Length = 608
Score = 54.0 bits (27), Expect = 1e-005
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
|||||||||||||||| ||||||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 70 ggcggcgtcttcttcagcttctgggtgctggctcacctgtacccgttcgcncagggcctc 11
Query: 116 ctgggg 121
|||||
Sbjct: 10 atgggg 5
>gb|BQ237973.1|BQ237973 TaE05009H10F TaE05 Triticum aestivum cDNA clone TaE05009H10F, mRNA
sequence
Length = 612
Score = 52.0 bits (26), Expect = 6e-005
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 56 ggcggcgtcttcttcaacttctgggtgctgttccacctctaccccttcgccaagggcatc 115
|||||||||||||||| ||||||||||||| ||||| ||| |||||||||||| ||
Sbjct: 70 ggcggcgtcttcttcagcttctgggtgctggctcacctgcccccgttcgccaagggcctc 11
Query: 116 ctgggg 121
|||||
Sbjct: 10 atgggg 5
>gb|CK160883.1|CK160883 FGAS042534 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 913
Score = 44.1 bits (22), Expect = 0.014
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 603 aagatgtgttgatttgatttag 624
||||||||||||||||||||||
Sbjct: 813 aagatgtgttgatttgatttag 834
>gb|AL829369.1|AL829369 AL829369 q:141 Triticum aestivum cDNA clone C03_q141_plate_8, mRNA
sequence
Length = 398
Score = 42.1 bits (21), Expect = 0.057
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 100 cttcgccaagggcatcctggg 120
|||||||||||||||||||||
Sbjct: 113 cttcgccaagggcatcctggg 93
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 203,788
Number of Sequences: 636343
Number of extensions: 203788
Number of successful extensions: 61290
Number of sequences better than 0.5: 52
Number of HSP's better than 0.5 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61128
Number of HSP's gapped (non-prelim): 139
length of query: 782
length of database: 367,240,239
effective HSP length: 19
effective length of query: 763
effective length of database: 355,149,722
effective search space: 270979237886
effective search space used: 270979237886
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)