BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521686.2.1
(2104 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE400040.1|BE400040 AWB010.E08F000328 ITEC AWB Wheat Mei... 80 7e-013
gb|BQ239656.1|BQ239656 TaE05028C11R TaE05 Triticum aestivum... 58 3e-006
gb|BJ313431.1|BJ313431 BJ313431 Y. Ogihara unpublished cDNA... 50 6e-004
gb|CD883670.1|CD883670 F1.114B05F010503 F1 Triticum aestivu... 50 6e-004
gb|CV780086.1|CV780086 FGAS074495 Triticum aestivum FGAS: L... 50 6e-004
gb|BJ319183.1|BJ319183 BJ319183 Y. Ogihara unpublished cDNA... 48 0.003
gb|AL825914.1|AL825914 AL825914 p:234 Triticum aestivum cDN... 48 0.003
gb|CD919272.1|CD919272 G608.112M02F010911 G608 Triticum aes... 48 0.003
gb|BG604891.1|BG604891 WHE0944_F01_L02ZS Wheat 5-15 DAP spi... 46 0.010
gb|BJ226188.1|BJ226188 BJ226188 Y. Ogihara unpublished cDNA... 46 0.010
gb|BQ241201.1|BQ241201 TaE05008A10R TaE05 Triticum aestivum... 46 0.010
gb|AL817267.1|AL817267 AL817267 j:324 Triticum aestivum cDN... 46 0.010
gb|AL817742.1|AL817742 AL817742 l:226 Triticum aestivum cDN... 46 0.010
gb|AL817809.1|AL817809 AL817809 l:226 Triticum aestivum cDN... 46 0.010
gb|AL818405.1|AL818405 AL818405 l:125 Triticum aestivum cDN... 46 0.010
gb|BQ805973.1|BQ805973 WHE3573_C01_F01ZS Wheat developing g... 46 0.010
gb|BQ806548.1|BQ806548 WHE3580_C12_E24ZS Wheat developing g... 46 0.010
gb|BQ842361.1|BQ842361 WHE2992_A09_A18ZS Wheat dormant embr... 46 0.010
gb|BJ291177.1|BJ291177 BJ291177 Y. Ogihara unpublished cDNA... 46 0.010
gb|BJ291253.1|BJ291253 BJ291253 Y. Ogihara unpublished cDNA... 46 0.010
gb|BJ292071.1|BJ292071 BJ292071 Y. Ogihara unpublished cDNA... 46 0.010
gb|CA716539.1|CA716539 wdk3c.pk026.n13 wdk3c Triticum aesti... 46 0.010
gb|CD901163.1|CD901163 G356.102P10F010913 G356 Triticum aes... 46 0.010
gb|CD902084.1|CD902084 G356.105N17F010918 G356 Triticum aes... 46 0.010
gb|CD902106.1|CD902106 G356.105P03F010918 G356 Triticum aes... 46 0.010
gb|CD905790.1|CD905790 G468.102O12F010808 G468 Triticum aes... 46 0.010
gb|CD906040.1|CD906040 G468.103M07F010808 G468 Triticum aes... 46 0.010
gb|CD906234.1|CD906234 G468.104E22F010809 G468 Triticum aes... 46 0.010
gb|CD906595.1|CD906595 G468.105C20F010810 G468 Triticum aes... 46 0.010
gb|CD906596.1|CD906596 G468.105C20F011012 G468 Triticum aes... 46 0.010
gb|CD907348.1|CD907348 G468.106K15F010810 G468 Triticum aes... 46 0.010
gb|CD908379.1|CD908379 G468.109L20F010817 G468 Triticum aes... 46 0.010
gb|CD910330.1|CD910330 G550.001A04F010228 G550 Triticum aes... 46 0.010
gb|CD910542.1|CD910542 G550.001I13F010228 G550 Triticum aes... 46 0.010
gb|CD910545.1|CD910545 G550.001I15F010228 G550 Triticum aes... 46 0.010
gb|CD910668.1|CD910668 G550.001N21F010301 G550 Triticum aes... 46 0.010
gb|CD921719.1|CD921719 G750.001L19F010305 G750 Triticum aes... 46 0.010
gb|AL810580.1|AL810580 AL810580 e:29 Triticum aestivum cDNA... 46 0.010
gb|BJ231090.1|BJ231090 BJ231090 Y. Ogihara unpublished cDNA... 44 0.039
gb|CD877818.1|CD877818 AZO4.101D04R011121 AZO4 Triticum aes... 44 0.039
gb|AY290727.1| Triticum aestivum putative cytochrome P450-l... 44 0.039
gb|BJ258479.1|BJ258479 BJ258479 Y. Ogihara unpublished cDNA... 42 0.15
gb|AL818398.1|AL818398 AL818398 l:125 Triticum aestivum cDN... 42 0.15
gb|BQ789136.1|BQ789136 WHE4158_A04_B08ZS Wheat CS whole pla... 42 0.15
gb|BQ789335.1|BQ789335 WHE4160_C01_E02ZS Wheat CS whole pla... 42 0.15
gb|BQ801337.1|BQ801337 WHE2813_B09_C17ZS Triticum monococcu... 42 0.15
gb|CA699911.1|CA699911 wlk8.pk0024.g12 wlk8 Triticum aestiv... 42 0.15
gb|CD874293.1|CD874293 AZO3.101N06F010929 AZO3 Triticum aes... 42 0.15
gb|CD881252.1|CD881252 F1.102H07F010328 F1 Triticum aestivu... 42 0.15
gb|CD918286.1|CD918286 G608.108M02F010907 G608 Triticum aes... 42 0.15
gb|CD918287.1|CD918287 G608.108M02R011024 G608 Triticum aes... 42 0.15
gb|CK208119.1|CK208119 FGAS019800 Triticum aestivum FGAS: L... 42 0.15
gb|DR735687.1|DR735687 FGAS081321 Triticum aestivum FGAS: L... 42 0.15
gb|DR739635.1|DR739635 FGAS084852 Triticum aestivum FGAS: L... 42 0.15
>gb|BE400040.1|BE400040 AWB010.E08F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB010.E08, mRNA sequence
Length = 550
Score = 79.8 bits (40), Expect = 7e-013
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 682 gaacgcgtccgggtcggcccacacggcggcatcgtgggttatggcccacatattcaccat 741
|||| ||||||| |||||||||||| ||| |||||||| ||||||||||| ||||||||
Sbjct: 164 gaactcgtccggctcggcccacacgtcggggtcgtgggtgatggcccacatgttcaccat 105
Query: 742 cgccgtggtgccagccggga 761
|| ||||||||||| ||||
Sbjct: 104 ggctgtggtgccagcgggga 85
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 593 cgcccggcgccgaacggggccaggcggaggtc 624
|||||||| |||||||| ||||||||||||||
Sbjct: 241 cgcccggccccgaacggcgccaggcggaggtc 210
Score = 48.1 bits (24), Expect = 0.003
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 793 ggtggcgaggcgagcccagctcagcagcgggccaggcgggtgggcgcgcagcgtct 848
|||||||||||| |||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 56 ggtggcgaggcgggcccaggagagcagcgggccgggcgggtgcacacgcagcgtct 1
>gb|BQ239656.1|BQ239656 TaE05028C11R TaE05 Triticum aestivum cDNA clone TaE05028C11R, mRNA
sequence
Length = 309
Score = 58.0 bits (29), Expect = 3e-006
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1514 cgcggggagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttg 1573
||||| ||||| ||||||| ||||| ||||||||||| ||||||||| |||||| |
Sbjct: 225 cgcggcgagaagaggtgcgaggacgacacgcggcggagcgtgcgccagtaggcgccgtag 166
Query: 1574 ggcgcgaacccgatggc 1590
|| ||||||||||||||
Sbjct: 165 ggggcgaacccgatggc 149
>gb|BJ313431.1|BJ313431 BJ313431 Y. Ogihara unpublished cDNA library, Wh_yf Triticum aestivum
cDNA clone whyf5g06 5', mRNA sequence
Length = 591
Score = 50.1 bits (25), Expect = 6e-004
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 1514 cgcggggagaataggtgcgtggacgcgacgcggcggaggcggcgccagtactcgccgttg 1573
||||| ||||| ||||||| ||||| || |||||||| ||||||||| |||||| |
Sbjct: 136 cgcggagagaagaggtgcgaggacgacacccggcggagcgtgcgccagtaggcgccgtag 77
Query: 1574 ggcgcgaacccgatggc 1590
|| ||||||||||||||
Sbjct: 76 ggggcgaacccgatggc 60
Score = 46.1 bits (23), Expect = 0.010
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1241 gcgagccaggggaggtggtcggaccagttga 1271
|||||||| ||||||||||||||||| ||||
Sbjct: 409 gcgagccacgggaggtggtcggaccaattga 379
>gb|CD883670.1|CD883670 F1.114B05F010503 F1 Triticum aestivum cDNA clone F1114B05, mRNA
sequence
Length = 563
Score = 50.1 bits (25), Expect = 6e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1554 ggcgccagtactcgccgttgggcgcgaac 1582
|||||||||||||||||| ||||||||||
Sbjct: 436 ggcgccagtactcgccgtagggcgcgaac 408
>gb|CV780086.1|CV780086 FGAS074495 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 816
Score = 50.1 bits (25), Expect = 6e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1554 ggcgccagtactcgccgttgggcgcgaac 1582
|||||||||||||||||| ||||||||||
Sbjct: 480 ggcgccagtactcgccgtagggcgcgaac 452
>gb|BJ319183.1|BJ319183 BJ319183 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf5g06 3', mRNA sequence
Length = 651
Score = 48.1 bits (24), Expect = 0.003
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 699 cccacacggcggcatcgtgggttatggcccacatattcaccatcgccgtggt 750
|||||||||| | |||||||||||||||||||| || ||||| || |||||
Sbjct: 592 cccacacggctgggtcgtgggttatggcccacatgttgaccatggcagtggt 643
>gb|AL825914.1|AL825914 AL825914 p:234 Triticum aestivum cDNA clone
B01_p234_plate_18_run_2, mRNA sequence
Length = 505
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 844 cgtctccttcacaaccgcctgcaggtacggca 875
|||||||||||| |||||||||||||| ||||
Sbjct: 171 cgtctccttcaccaccgcctgcaggtagggca 140
>gb|CD919272.1|CD919272 G608.112M02F010911 G608 Triticum aestivum cDNA clone G608112M02,
mRNA sequence
Length = 657
Score = 48.1 bits (24), Expect = 0.003
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 699 cccacacggcggcatcgtgggttatggcccacatattcaccatcgccgtggt 750
|||||||||| | |||||||||||||||||||| || ||||| || |||||
Sbjct: 135 cccacacggctgggtcgtgggttatggcccacatgttgaccatggcagtggt 84
>gb|BG604891.1|BG604891 WHE0944_F01_L02ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0944_F01_L02, mRNA sequence
Length = 458
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 163 cgacgccgcggacgtccacgtcg 185
>gb|BJ226188.1|BJ226188 BJ226188 Y. Ogihara unpublished cDNA library, Wh_dL Triticum aestivum
cDNA clone whdl25g14 5', mRNA sequence
Length = 605
Score = 46.1 bits (23), Expect = 0.010
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1022 aagaccatctcccagaggatggcgaccatgtcgtcgtcg 1060
|||| |||||||||||||| ||||| ||||||| |||||
Sbjct: 127 aagatcatctcccagaggacggcgatcatgtcggcgtcg 89
Score = 44.1 bits (22), Expect = 0.039
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 713 tcgtgggttatggcccacatattcaccatcgccgtggt 750
|||||||||||||||||||| || ||||| || |||||
Sbjct: 433 tcgtgggttatggcccacatgttgaccatggcagtggt 396
>gb|BQ241201.1|BQ241201 TaE05008A10R TaE05 Triticum aestivum cDNA clone TaE05008A10R, mRNA
sequence
Length = 569
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 189 cgacgccgcggacgtccacgtcg 211
>gb|AL817267.1|AL817267 AL817267 j:324 Triticum aestivum cDNA clone D09_j324_plate_7, mRNA
sequence
Length = 306
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 179 cgacgccgcggacgtccacgtcg 201
>gb|AL817742.1|AL817742 AL817742 l:226 Triticum aestivum cDNA clone F04_l226_plate_10, mRNA
sequence
Length = 527
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 176 cgacgccgcggacgtccacgtcg 198
>gb|AL817809.1|AL817809 AL817809 l:226 Triticum aestivum cDNA clone F05_l226_plate_11, mRNA
sequence
Length = 477
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 128 cgacgccgcggacgtccacgtcg 150
>gb|AL818405.1|AL818405 AL818405 l:125 Triticum aestivum cDNA clone F01_l125_plate_1, mRNA
sequence
Length = 346
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 163 cgacgccgcggacgtccacgtcg 185
>gb|BQ805973.1|BQ805973 WHE3573_C01_F01ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3573_C01_F01, mRNA sequence
Length = 649
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 157 cgacgccgcggacgtccacgtcg 179
>gb|BQ806548.1|BQ806548 WHE3580_C12_E24ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3580_C12_E24, mRNA sequence
Length = 676
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 146 cgacgccgcggacgtccacgtcg 168
>gb|BQ842361.1|BQ842361 WHE2992_A09_A18ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2992_A09_A18, mRNA sequence
Length = 675
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 79 cgacgccgcggacgtccacgtcg 101
>gb|BJ291177.1|BJ291177 BJ291177 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl22b05 5', mRNA sequence
Length = 390
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 66 cgacgccgcggacgtccacgtcg 88
>gb|BJ291253.1|BJ291253 BJ291253 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl22g23 5', mRNA sequence
Length = 614
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 144 cgacgccgcggacgtccacgtcg 166
>gb|BJ292071.1|BJ292071 BJ292071 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl26d21 5', mRNA sequence
Length = 627
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 72 cgacgccgcggacgtccacgtcg 94
>gb|CA716539.1|CA716539 wdk3c.pk026.n13 wdk3c Triticum aestivum cDNA clone wdk3c.pk026.n13
5' end, mRNA sequence
Length = 405
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 161 cgacgccgcggacgtccacgtcg 183
>gb|CD901163.1|CD901163 G356.102P10F010913 G356 Triticum aestivum cDNA clone G356102P10,
mRNA sequence
Length = 622
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 170 cgacgccgcggacgtccacgtcg 192
>gb|CD902084.1|CD902084 G356.105N17F010918 G356 Triticum aestivum cDNA clone G356105N17,
mRNA sequence
Length = 664
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 179 cgacgccgcggacgtccacgtcg 201
>gb|CD902106.1|CD902106 G356.105P03F010918 G356 Triticum aestivum cDNA clone G356105P03,
mRNA sequence
Length = 648
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 94 cgacgccgcggacgtccacgtcg 116
>gb|CD905790.1|CD905790 G468.102O12F010808 G468 Triticum aestivum cDNA clone G468102O12,
mRNA sequence
Length = 626
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 182 cgacgccgcggacgtccacgtcg 204
>gb|CD906040.1|CD906040 G468.103M07F010808 G468 Triticum aestivum cDNA clone G468103M07,
mRNA sequence
Length = 726
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 180 cgacgccgcggacgtccacgtcg 202
>gb|CD906234.1|CD906234 G468.104E22F010809 G468 Triticum aestivum cDNA clone G468104E22,
mRNA sequence
Length = 526
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 189 cgacgccgcggacgtccacgtcg 211
>gb|CD906595.1|CD906595 G468.105C20F010810 G468 Triticum aestivum cDNA clone G468105C20,
mRNA sequence
Length = 564
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 165 cgacgccgcggacgtccacgtcg 187
>gb|CD906596.1|CD906596 G468.105C20F011012 G468 Triticum aestivum cDNA clone G468105C20,
mRNA sequence
Length = 729
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 167 cgacgccgcggacgtccacgtcg 189
>gb|CD907348.1|CD907348 G468.106K15F010810 G468 Triticum aestivum cDNA clone G468106K15,
mRNA sequence
Length = 630
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 169 cgacgccgcggacgtccacgtcg 191
>gb|CD908379.1|CD908379 G468.109L20F010817 G468 Triticum aestivum cDNA clone G468109L20,
mRNA sequence
Length = 554
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 188 cgacgccgcggacgtccacgtcg 210
>gb|CD910330.1|CD910330 G550.001A04F010228 G550 Triticum aestivum cDNA clone G550001A04,
mRNA sequence
Length = 779
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 195 cgacgccgcggacgtccacgtcg 217
>gb|CD910542.1|CD910542 G550.001I13F010228 G550 Triticum aestivum cDNA clone G550001I13,
mRNA sequence
Length = 722
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 139 cgacgccgcggacgtccacgtcg 161
>gb|CD910545.1|CD910545 G550.001I15F010228 G550 Triticum aestivum cDNA clone G550001I15,
mRNA sequence
Length = 709
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 174 cgacgccgcggacgtccacgtcg 196
>gb|CD910668.1|CD910668 G550.001N21F010301 G550 Triticum aestivum cDNA clone G550001N21,
mRNA sequence
Length = 739
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 165 cgacgccgcggacgtccacgtcg 187
>gb|CD921719.1|CD921719 G750.001L19F010305 G750 Triticum aestivum cDNA clone G750001L19,
mRNA sequence
Length = 625
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 138 cgacgccgcggacgtccacgtcg 160
>gb|AL810580.1|AL810580 AL810580 e:29 Triticum aestivum cDNA clone F06_e29_plate_4, mRNA
sequence
Length = 595
Score = 46.1 bits (23), Expect = 0.010
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 624 cgacgccgcggacgtccacgtcg 646
|||||||||||||||||||||||
Sbjct: 177 cgacgccgcggacgtccacgtcg 199
>gb|BJ231090.1|BJ231090 BJ231090 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl25g14 3', mRNA sequence
Length = 672
Score = 44.1 bits (22), Expect = 0.039
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 713 tcgtgggttatggcccacatattcaccatcgccgtggt 750
|||||||||||||||||||| || ||||| || |||||
Sbjct: 615 tcgtgggttatggcccacatgttgaccatggcagtggt 652
>gb|CD877818.1|CD877818 AZO4.101D04R011121 AZO4 Triticum aestivum cDNA clone AZO4101D04,
mRNA sequence
Length = 771
Score = 44.1 bits (22), Expect = 0.039
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 576 tgccggggcagacgcgacgcccggcgccgaacgg 609
|||| |||||||| || |||||||||||||||||
Sbjct: 388 tgcccgggcagacccgccgcccggcgccgaacgg 421
>gb|AY290727.1| Triticum aestivum putative cytochrome P450-like mRNA, partial
sequence
Length = 544
Score = 44.1 bits (22), Expect = 0.039
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 576 tgccggggcagacgcgacgcccggcgccgaacgg 609
|||| |||||||| || |||||||||||||||||
Sbjct: 141 tgcccgggcagacccgccgcccggcgccgaacgg 108
>gb|BJ258479.1|BJ258479 BJ258479 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh8b01 5', mRNA sequence
Length = 697
Score = 42.1 bits (21), Expect = 0.15
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 225 ccggtgatggtgagactaaga 245
|||||||||||||||||||||
Sbjct: 134 ccggtgatggtgagactaaga 154
>gb|AL818398.1|AL818398 AL818398 l:125 Triticum aestivum cDNA clone E01_l125_plate_1, mRNA
sequence
Length = 532
Score = 42.1 bits (21), Expect = 0.15
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 626 acgccgcggacgtccacgtcg 646
|||||||||||||||||||||
Sbjct: 184 acgccgcggacgtccacgtcg 204
>gb|BQ789136.1|BQ789136 WHE4158_A04_B08ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4158_A04_B08, mRNA sequence
Length = 630
Score = 42.1 bits (21), Expect = 0.15
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 225 ccggtgatggtgagactaaga 245
|||||||||||||||||||||
Sbjct: 479 ccggtgatggtgagactaaga 499
>gb|BQ789335.1|BQ789335 WHE4160_C01_E02ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4160_C01_E02, mRNA sequence
Length = 681
Score = 42.1 bits (21), Expect = 0.15
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 610 ggccaggcggaggtcgacgcc 630
|||||||||||||||||||||
Sbjct: 544 ggccaggcggaggtcgacgcc 524
>gb|BQ801337.1|BQ801337 WHE2813_B09_C17ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2813_B09_C17, mRNA
sequence
Length = 429
Score = 42.1 bits (21), Expect = 0.15
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 225 ccggtgatggtgagactaaga 245
|||||||||||||||||||||
Sbjct: 159 ccggtgatggtgagactaaga 179
>gb|CA699911.1|CA699911 wlk8.pk0024.g12 wlk8 Triticum aestivum cDNA clone wlk8.pk0024.g12 5'
end, mRNA sequence
Length = 452
Score = 42.1 bits (21), Expect = 0.15
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1140 ggcggcgccggtgctcgtcga 1160
|||||||||||||||||||||
Sbjct: 77 ggcggcgccggtgctcgtcga 57
>gb|CD874293.1|CD874293 AZO3.101N06F010929 AZO3 Triticum aestivum cDNA clone AZO3101N06,
mRNA sequence
Length = 653
Score = 42.1 bits (21), Expect = 0.15
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 847 ctccttcacaaccgcctgcaggtacggca 875
||||||||| || ||||||||||||||||
Sbjct: 287 ctccttcaccacggcctgcaggtacggca 259
>gb|CD881252.1|CD881252 F1.102H07F010328 F1 Triticum aestivum cDNA clone F1102H07, mRNA
sequence
Length = 706
Score = 42.1 bits (21), Expect = 0.15
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 847 ctccttcacaaccgcctgcaggtacggca 875
||||||||| || ||||||||||||||||
Sbjct: 286 ctccttcaccacggcctgcaggtacggca 258
>gb|CD918286.1|CD918286 G608.108M02F010907 G608 Triticum aestivum cDNA clone G608108M02,
mRNA sequence
Length = 722
Score = 42.1 bits (21), Expect = 0.15
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 847 ctccttcacaaccgcctgcaggtacggca 875
||||||||| || ||||||||||||||||
Sbjct: 664 ctccttcaccacggcctgcaggtacggca 636
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 756,956
Number of Sequences: 636343
Number of extensions: 756956
Number of successful extensions: 237797
Number of sequences better than 0.5: 54
Number of HSP's better than 0.5 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 237699
Number of HSP's gapped (non-prelim): 97
length of query: 2104
length of database: 367,240,239
effective HSP length: 20
effective length of query: 2084
effective length of database: 354,513,379
effective search space: 738805881836
effective search space used: 738805881836
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)