BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493531.2.1
(1061 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA620870.1|CA620870 wl1n.pk0068.d7 wl1n Triticum aestivu... 535 e-150
gb|BJ211119.1|BJ211119 BJ211119 Y. Ogihara unpublished cDNA... 321 6e-086
gb|CV770817.1|CV770817 FGAS065210 Triticum aestivum FGAS: L... 317 9e-085
gb|DR738339.1|DR738339 FGAS083556 Triticum aestivum FGAS: L... 317 9e-085
gb|BJ232561.1|BJ232561 BJ232561 Y. Ogihara unpublished cDNA... 315 3e-084
gb|CN011715.1|CN011715 WHE3887_H06_O11ZS Wheat Fusarium gra... 311 5e-083
gb|AJ612348.1|AJ612348 AJ612348 Triticum turgidum subsp. du... 303 1e-080
gb|BJ277260.1|BJ277260 BJ277260 Y. Ogihara unpublished cDNA... 285 3e-075
gb|AY543533.1| Triticum aestivum expansin EXPA7 mRNA, compl... 285 3e-075
gb|BM137817.1|BM137817 WHE0471_G04_M07ZS Wheat Fusarium gra... 283 1e-074
gb|AL815146.1|AL815146 AL815146 h:116 Triticum aestivum cDN... 280 2e-073
gb|CK214305.1|CK214305 FGAS026228 Triticum aestivum FGAS: L... 246 3e-063
gb|CA657384.1|CA657384 wlm0.pk0037.b5 wlm0 Triticum aestivu... 242 4e-062
gb|DR739498.1|DR739498 FGAS084715 Triticum aestivum FGAS: L... 192 3e-047
gb|BJ282446.1|BJ282446 BJ282446 Y. Ogihara unpublished cDNA... 184 8e-045
gb|AJ611195.1|AJ611195 AJ611195 Triticum turgidum subsp. du... 178 5e-043
gb|BQ161707.1|BQ161707 WHE0471_G04_M07ZT Wheat Fusarium gra... 174 8e-042
gb|BJ218486.1|BJ218486 BJ218486 Y. Ogihara unpublished cDNA... 168 5e-040
gb|BJ238210.1|BJ238210 BJ238210 Y. Ogihara unpublished cDNA... 168 5e-040
gb|CA602791.1|CA602791 wr1.pk0008.h8 wr1 Triticum aestivum ... 168 5e-040
gb|CD492147.1|CD492147 WHE2476_H10_O20ZT Triticum monococcu... 168 5e-040
gb|DR734131.1|DR734131 FGAS079887 Triticum aestivum FGAS: L... 98 2e-018
gb|CA654193.1|CA654193 wre1n.pk163.a6 wre1n Triticum aestiv... 72 9e-011
gb|BG314391.1|BG314391 WHE2476_H10_O20ZS Triticum monococcu... 70 3e-010
gb|CD873319.1|CD873319 AZO2.122O05F010208 AZO2 Triticum aes... 50 3e-004
gb|BE517372.1|BE517372 WHE0625_C01_E01ZA Wheat ABA-treated ... 48 0.001
gb|BE500565.1|BE500565 WHE0987-0990_E20_E20ZS Wheat pre-ant... 46 0.005
gb|BJ248015.1|BJ248015 BJ248015 Y. Ogihara unpublished cDNA... 46 0.005
gb|BJ254143.1|BJ254143 BJ254143 Y. Ogihara unpublished cDNA... 46 0.005
gb|BU100869.1|BU100869 WHE3358_G12_N24ZS Chinese Spring alu... 46 0.005
gb|CA733111.1|CA733111 wlp1c.pk007.h16 wlp1c Triticum aesti... 46 0.005
gb|CD907538.1|CD907538 G468.107E14F010814 G468 Triticum aes... 46 0.005
gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, comp... 46 0.005
gb|BJ279055.1|BJ279055 BJ279055 Y. Ogihara unpublished cDNA... 44 0.020
gb|BQ240141.1|BQ240141 TaE05021F01R TaE05 Triticum aestivum... 44 0.020
gb|CA498759.1|CA498759 WHE3247_D02_H03ZT Wheat meiotic anth... 44 0.020
gb|CA682769.1|CA682769 wlm96.pk0006.g1 wlm96 Triticum aesti... 44 0.020
gb|CA713604.1|CA713604 wdk3c.pk020.f16 wdk3c Triticum aesti... 44 0.020
gb|CA717356.1|CA717356 wdk4c.pk005.m13 wdk4c Triticum aesti... 44 0.020
gb|CD902983.1|CD902983 G356.108L20F010919 G356 Triticum aes... 44 0.020
gb|CK194728.1|CK194728 FGAS003160 Triticum aestivum FGAS: L... 44 0.020
gb|CV766372.1|CV766372 FGAS060759 Triticum aestivum FGAS: L... 44 0.020
gb|CV767540.1|CV767540 FGAS061930 Triticum aestivum FGAS: L... 44 0.020
gb|AY368673.1| Triticum turgidum HMW-glutenin locus, comple... 44 0.020
gb|CL901377.1|CL901377 CSHC0752 1639HC library Triticum aes... 42 0.077
gb|BE498867.1|BE498867 WHE0966_A06_B12ZS Wheat pre-anthesis... 42 0.077
gb|BF201531.1|BF201531 WHE1771_F09_K17ZS Wheat pre-anthesis... 42 0.077
gb|BF484994.1|BF484994 WHE1792_A11_A22ZS Wheat pre-anthesis... 42 0.077
gb|BQ803760.1|BQ803760 WHE2841_E08_I15ZS Triticum monococcu... 42 0.077
gb|BQ805422.1|BQ805422 WHE3566_G08_N16ZS Wheat developing g... 42 0.077
gb|BQ839070.1|BQ839070 WHE3589_A06_B11ZS Wheat developing g... 42 0.077
gb|BQ839374.1|BQ839374 WHE4165_D06_H11ZS Wheat CS whole pla... 42 0.077
gb|CA618111.1|CA618111 wl1n.pk0030.e3 wl1n Triticum aestivu... 42 0.077
gb|CA707386.1|CA707386 wdk2c.pk005.k15 wdk2c Triticum aesti... 42 0.077
gb|CA733626.1|CA733626 wlp1c.pk005.p17 wlp1c Triticum aesti... 42 0.077
gb|CD862203.1|CD862203 AZO1.102M08F010126 AZO1 Triticum aes... 42 0.077
gb|CD892135.1|CD892135 G118.120B04F010725 G118 Triticum aes... 42 0.077
gb|CK210097.1|CK210097 FGAS021888 Triticum aestivum FGAS: L... 42 0.077
gb|DR737942.1|DR737942 FGAS083159 Triticum aestivum FGAS: L... 42 0.077
gb|DR739882.1|DR739882 FGAS000149 Triticum aestivum FGAS: L... 42 0.077
gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA,... 42 0.077
gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, compl... 42 0.077
gb|BE438209.1|BE438209 WHE0006.C09R000701 ITEC WHE Wheat En... 40 0.30
gb|BF474969.1|BF474969 WHE2104_C02_F04ZS Wheat salt-stresse... 40 0.30
gb|BJ250211.1|BJ250211 BJ250211 Y. Ogihara unpublished cDNA... 40 0.30
gb|BJ311621.1|BJ311621 BJ311621 Y. Ogihara unpublished cDNA... 40 0.30
gb|AL831131.1|AL831131 AL831131 q:242 Triticum aestivum cDN... 40 0.30
gb|BQ744163.1|BQ744163 WHE4112_D09_H18ZS Wheat salt-stresse... 40 0.30
gb|BQ752799.1|BQ752799 WHE4119_C06_F11ZS Wheat salt-stresse... 40 0.30
gb|BQ753049.1|BQ753049 WHE4122_D07_G14ZS Wheat salt-stresse... 40 0.30
gb|BQ801863.1|BQ801863 WHE2819_D08_H15ZS Triticum monococcu... 40 0.30
gb|BQ802562.1|BQ802562 WHE2827_D01_H01ZS Triticum monococcu... 40 0.30
gb|BQ804541.1|BQ804541 WHE3555_H04_O07ZS Wheat developing g... 40 0.30
gb|BQ842153.1|BQ842153 WHE2989_E08_J15ZS Wheat dormant embr... 40 0.30
gb|BJ214117.1|BJ214117 BJ214117 Y. Ogihara unpublished cDNA... 40 0.30
gb|CA597407.1|CA597407 wpa1c.pk016.f8 wpa1c Triticum aestiv... 40 0.30
gb|CA619921.1|CA619921 wl1n.pk0062.a6 wl1n Triticum aestivu... 40 0.30
gb|CA625567.1|CA625567 wl1n.pk0143.f12 wl1n Triticum aestiv... 40 0.30
gb|CA635193.1|CA635193 wle1n.pk0091.a11 wle1n Triticum aest... 40 0.30
gb|CA663366.1|CA663366 wlmk1.pk0034.h6 wlmk1 Triticum aesti... 40 0.30
gb|CA682982.1|CA682982 wlm96.pk0011.f3 wlm96 Triticum aesti... 40 0.30
gb|CA720738.1|CA720738 wkm2n.pk008.c7 wkm2n Triticum aestiv... 40 0.30
gb|CA725990.1|CA725990 wet1s.pk001.n4 wet1s Triticum aestiv... 40 0.30
gb|CA730040.1|CA730040 wip1c.pk003.o6 wip1c Triticum aestiv... 40 0.30
gb|CA732260.1|CA732260 wlp1c.pk003.e13 wlp1c Triticum aesti... 40 0.30
gb|CA732453.1|CA732453 wlp1c.pk005.m24 wlp1c Triticum aesti... 40 0.30
gb|CA734540.1|CA734540 wpi1s.pk001.k7 wpi1s Triticum aestiv... 40 0.30
gb|CA745469.1|CA745469 wri2s.pk001.f5 wri2s Triticum aestiv... 40 0.30
gb|CA747094.1|CA747094 wri2s.pk007.f10 wri2s Triticum aesti... 40 0.30
gb|CD868568.1|CD868568 AZO2.109E14R010328 AZO2 Triticum aes... 40 0.30
gb|CD876306.1|CD876306 AZO3.109F02F011011 AZO3 Triticum aes... 40 0.30
gb|CD888795.1|CD888795 G118.110D13F010720 G118 Triticum aes... 40 0.30
gb|CD903372.1|CD903372 G356.110D04F010919 G356 Triticum aes... 40 0.30
gb|CD927996.1|CD927996 GR45.103L18F010315 GR45 Triticum aes... 40 0.30
gb|CK161189.1|CK161189 FGAS013754 Triticum aestivum FGAS: L... 40 0.30
gb|CK196609.1|CK196609 FGAS005068 Triticum aestivum FGAS: L... 40 0.30
gb|CK208053.1|CK208053 FGAS019731 Triticum aestivum FGAS: L... 40 0.30
gb|CV771010.1|CV771010 FGAS065403 Triticum aestivum FGAS: L... 40 0.30
gb|CV773460.1|CV773460 FGAS067856 Triticum aestivum FGAS: L... 40 0.30
gb|DR738564.1|DR738564 FGAS083781 Triticum aestivum FGAS: L... 40 0.30
emb|AJ867404.1| Triticum aestivum partial mRNA for glycosyl... 40 0.30
>gb|CA620870.1|CA620870 wl1n.pk0068.d7 wl1n Triticum aestivum cDNA clone wl1n.pk0068.d7 5'
end, mRNA sequence
Length = 564
Score = 535 bits (270), Expect = e-150
Identities = 328/350 (93%), Gaps = 2/350 (0%)
Strand = Plus / Plus
Query: 16 cctcactccttcctctcccagtccccagcttcaccgaggcatacggcataccataccggc 75
||||| || |||||||||||||||||| ||||||| | ||||||||||||||| ||||||
Sbjct: 21 cctcantcnttcctctcccagtccccancttcaccnangcatacggcataccanaccggc 80
Query: 76 accggcagcgagcagtcgggagccatggctccgccgctcctgctcttcttcctcctcctc 135
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ancggcagcgagcagtcgggagccatggctccgccgctcctgctcttcttcctcctcctc 140
Query: 136 cccctcctcacggccctcgctgacggacaccagcacctgtttctcctacggctcctccgc 195
||||||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||
Sbjct: 141 cccctcctcacggncctcgctgacggacacnagcacctg-tcctcctacggctcctccgc 199
Query: 196 gctctccgattggcgccccgccaaggcatcctactacgccgccgaccccgaagacgccat 255
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 200 gctctccgattggcgccccgccaangcatcctactacgccgccgaccccgaagacgncat 259
Query: 256 cggtggggcgtgcgggttcggggatctggggaaacacggctacgggatggcgacggtg-g 314
| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
Sbjct: 260 cngtggggcgtgcgggttcggggatctggggaaacacggntacnggatggcgacggtgng 319
Query: 315 ggctgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctac 364
|||||||||| ||||||||||||||| |||||| |||| |||| ||||||
Sbjct: 320 ggctgagcacngcgctgtttgagcgcngcgcggagtgctgcggatgctac 369
>gb|BJ211119.1|BJ211119 BJ211119 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh37o17 5', mRNA sequence
Length = 630
Score = 321 bits (162), Expect = 6e-086
Identities = 270/305 (88%), Gaps = 7/305 (2%)
Strand = Plus / Plus
Query: 93 gggagccatggctccgccgctcctgctcttcttcctcctcctccccctcctcacggccct 152
||||||||||||||| |||||||| ||| || ||||| |||||| || |||||||
Sbjct: 51 gggagccatggctcccccgctcctcctcctcgtcctcttcctcctcc------cggccct 104
Query: 153 cgctgacggacaccagcacctgtttctcctacggctcctccgcgctctccgattggcgcc 212
||| | ||| |||||||||| | |||||||||||||||||| |||||||| ||||||
Sbjct: 105 cgccgccggccaccagcacccctc-ctcctacggctcctccgccctctccgaatggcgca 163
Query: 213 ccgccaaggcatcctactacgccgccgaccccgaagacgccatcggtggggcgtgcgggt 272
||||||| | ||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 164 acgccaagtcctcctacttcgccgccgaccccggagacgccatcggtggcgcgtgcgggt 223
Query: 273 tcggggatctggggaaacacggctacgggatggcgacggtggggctgagcacggcgctgt 332
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 224 tcggggatctggggaagcacgggtacgggatggcgacggtggggctgagcacggcgctgt 283
Query: 333 ttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtgcgtcgaggacctcaagc 392
| ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 284 tcgagcgcggcgccgcctgcggcggctgctacgaggtcaagtgcgtggaggacctcaagt 343
Query: 393 actgc 397
|||||
Sbjct: 344 actgc 348
Score = 81.8 bits (41), Expect = 9e-014
Identities = 101/121 (83%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| ||||||| |
Sbjct: 503 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttctcgg 562
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| || || ||||| || ||||
Sbjct: 563 tctccgggaagagcttcttcttcacagtcctaatcagcaatgtcggcggcgctggcgatg 622
Query: 540 t 540
|
Sbjct: 623 t 623
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 429 ctgcaacccgcccaaccaccatttcctcctccccatccag 468
>gb|CV770817.1|CV770817 FGAS065210 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 856
Score = 317 bits (160), Expect = 9e-085
Identities = 236/260 (90%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 138 cctcctcacggccctcgctgacggacaccagcacctgtttctcctacggctcctccgcgc 197
||||||| |||||||||| | ||| |||||||||| | |||||||||||||||||| |
Sbjct: 237 cctcctcccggccctcgccgccggccaccagcacccctc-ctcctacggctcctccgccc 295
Query: 198 tctccgattggcgccccgccaaggcatcctactacgccgccgaccccgaagacgccatcg 257
||||||| |||||| ||||||| | ||||||| |||||||||||||| |||||||||||
Sbjct: 296 tctccgaatggcgcaacgccaagtcctcctacttcgccgccgaccccggagacgccatcg 355
Query: 258 gtggggcgtgcgggttcggggatctggggaaacacggctacgggatggcgacggtggggc 317
|||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 356 gtggcgcgtgcgggttcggggatctggggaagcacgggtacgggatggcgacggtggggc 415
Query: 318 tgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtgcg 377
|||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 416 tgagcacggcgctgttcgagcgcggcgccgcctgcggcggctgctacgaggtcaagtgcg 475
Query: 378 tcgaggacctcaagcactgc 397
| |||||||||||| |||||
Sbjct: 476 tggaggacctcaagtactgc 495
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaagg 462
|||||||||||||||||||||| || |||||||| || |||||
Sbjct: 648 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaagg 690
Score = 40.1 bits (20), Expect = 0.30
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctc 421
|||||||||||||| |||||||||||||
Sbjct: 576 ctgcaacccgccca-ccaccatttcctc 602
>gb|DR738339.1|DR738339 FGAS083556 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1169
Score = 317 bits (160), Expect = 9e-085
Identities = 236/260 (90%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 138 cctcctcacggccctcgctgacggacaccagcacctgtttctcctacggctcctccgcgc 197
||||||| |||||||||| | ||| |||||||||| | |||||||||||||||||| |
Sbjct: 204 cctcctcccggccctcgccgccggccaccagcacccctc-ctcctacggctcctccgccc 262
Query: 198 tctccgattggcgccccgccaaggcatcctactacgccgccgaccccgaagacgccatcg 257
||||||| |||||| ||||||| | ||||||| |||||||||||||| |||||||||||
Sbjct: 263 tctccgaatggcgcaacgccaagtcctcctacttcgccgccgaccccggagacgccatcg 322
Query: 258 gtggggcgtgcgggttcggggatctggggaaacacggctacgggatggcgacggtggggc 317
|||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 323 gtggcgcgtgcgggttcggggatctggggaagcacgggtacgggatggcgacggtggggc 382
Query: 318 tgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtgcg 377
|||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 383 tgagcacggcgctgttcgagcgcggcgccgcctgcggcggctgctacgaggtcaagtgcg 442
Query: 378 tcgaggacctcaagcactgc 397
| |||||||||||| |||||
Sbjct: 443 tggaggacctcaagtactgc 462
Score = 131 bits (66), Expect = 1e-028
Identities = 170/202 (84%), Gaps = 2/202 (0%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| |||| || |
Sbjct: 617 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttttcgg 676
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 677 tctccgggaagagcttcttcttcacagtcctaatcagcaatgttggtggcgctggtgatg 736
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctat-gggccgcaactgg 598
| || || ||||||||||||||||| ||| || |||||| ||| ||||||| |||||
Sbjct: 737 tgagatcagtgaagatcaaaggaacagagtctggctggctcgatatggggccgc-actgg 795
Query: 599 ggccaggtgtggcacatcaact 620
|||||| | |||||||||||||
Sbjct: 796 ggccagatatggcacatcaact 817
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 543 ctgcaacccgcccaaccaccatttcctcctccccatccag 582
>gb|BJ232561.1|BJ232561 BJ232561 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe1a02 5', mRNA sequence
Length = 547
Score = 315 bits (159), Expect = 3e-084
Identities = 269/305 (88%), Gaps = 7/305 (2%)
Strand = Plus / Plus
Query: 93 gggagccatggctccgccgctcctgctcttcttcctcctcctccccctcctcacggccct 152
||||||||||||||| |||||||| ||| || ||||| |||||| || |||||||
Sbjct: 49 gggagccatggctcccccgctcctcctcctcgtcctcttcctcctcc------cggccct 102
Query: 153 cgctgacggacaccagcacctgtttctcctacggctcctccgcgctctccgattggcgcc 212
||| | ||| |||||||||| | ||||||||||||||||| |||||||| ||||||
Sbjct: 103 cgccgccggccaccagcacccctc-ctcctacggctcctccgncctctccgaatggcgca 161
Query: 213 ccgccaaggcatcctactacgccgccgaccccgaagacgccatcggtggggcgtgcgggt 272
||||||| | ||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 162 acgccaagtcctcctacttcgccgccgaccccggagacgccatcggtggcgcgtgcgggt 221
Query: 273 tcggggatctggggaaacacggctacgggatggcgacggtggggctgagcacggcgctgt 332
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 222 tcggggatctggggaagcacgggtacgggatggcgacggtggggctgagcacggcgctgt 281
Query: 333 ttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtgcgtcgaggacctcaagc 392
| ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 282 tcgagcgcggcgccgcctgcggcggctgctacgaggtcaagtgcgtggaggacctcaagt 341
Query: 393 actgc 397
|||||
Sbjct: 342 actgc 346
Score = 58.0 bits (29), Expect = 1e-006
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
||||||||||||||||||||||||||| | |||||||||
Sbjct: 427 ctgcaacccgcccaaccaccatttcctnctccccatccag 466
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaagg 462
|||||||||||||||||||||| || |||||||| || |||||
Sbjct: 501 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaagg 543
>gb|CN011715.1|CN011715 WHE3887_H06_O11ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3887_H06_O11,
mRNA sequence
Length = 749
Score = 311 bits (157), Expect = 5e-083
Identities = 235/260 (90%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 138 cctcctcacggccctcgctgacggacaccagcacctgtttctcctacggctcctccgcgc 197
||||||| |||||||||| | ||| |||||||||| | |||||||||||||||||| |
Sbjct: 142 cctcctcccggccctcgccgccggccaccagcacccctc-ctcctacggctcctccgccc 200
Query: 198 tctccgattggcgccccgccaaggcatcctactacgccgccgaccccgaagacgccatcg 257
||||||| |||||| ||||||| | ||||||| |||||||||||||| |||||||||||
Sbjct: 201 tctccgaatggcgcaacgccaagtcctcctacttcgccgccgaccccggagacgccatcg 260
Query: 258 gtggggcgtgcgggttcggggatctggggaaacacggctacgggatggcgacggtggggc 317
|||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 261 gtggcgcgtgcgggttcggggatctggggaagcacgggtacgggatggcgacggtggggc 320
Query: 318 tgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtgcg 377
||| |||||||||||| ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 321 tgancacggcgctgttcgagcgcggcgccgcctgcggcggctgctacgaggtcaagtgcg 380
Query: 378 tcgaggacctcaagcactgc 397
| |||||||||||| |||||
Sbjct: 381 tggaggacctcaagtactgc 400
Score = 149 bits (75), Expect = 5e-034
Identities = 165/195 (84%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| |||| || |
Sbjct: 555 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttttcgg 614
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 615 tctccgggaagagcttcttcttcacagtcctaatcagcaatgttggtggcgctggtgatg 674
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctatgggccgcaactggg 599
| || || ||||||||||||||||| ||| || |||||| |||||||||||||||||
Sbjct: 675 tgagatcagtgaagatcaaaggaacagagtctggctggctcgatatgggccgcaactggg 734
Query: 600 gccaggtgtggcaca 614
||||| | |||||||
Sbjct: 735 gccagatatggcaca 749
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 481 ctgcaacccgcccaaccaccatttcctcctccccatccag 520
>gb|AJ612348.1|AJ612348 AJ612348 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 06593R, mRNA
sequence
Length = 787
Score = 303 bits (153), Expect = 1e-080
Identities = 236/261 (90%), Gaps = 2/261 (0%)
Strand = Plus / Plus
Query: 138 cctcctcacggccctcgctgacggacaccagcacctgtttctcctacggctcctccgcgc 197
||||||| |||||||||| | ||| |||||||||| | |||||||||||||||||| |
Sbjct: 108 cctcctcccggccctcgccgccggccaccagcacccctc-ctcctacggctcctccgccc 166
Query: 198 tctccgattggcgccccgccaaggcatcctactacgccgccgaccccgaagacgccatcg 257
||||||| |||||| ||||||| | ||||||| |||||||||||||| |||||||||||
Sbjct: 167 tctccgaatggcgcaacgccaagtcctcctacttcgccgccgaccccggagacgccatcg 226
Query: 258 gtggggcgtgcgggttcggggatctggggaaacacggctacgggatggcgacggtggggc 317
|||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 227 gtggcgcgtgcgggttcggggatctggggaagcacgggtacgggatggcgacggtggggc 286
Query: 318 tgagcac-ggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtgc 376
||||||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 287 tgagcacnggcgctgttcgagcgcggcgccgcctgcggcggctgctacgaggtcaagtgc 346
Query: 377 gtcgaggacctcaagcactgc 397
|| |||||||||||| |||||
Sbjct: 347 gtggaggacctcaagtactgc 367
Score = 161 bits (81), Expect = 1e-037
Identities = 171/201 (85%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| |||| || |
Sbjct: 522 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttttcgg 581
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 582 tctccgggaagagcttcttcttcacagtcctaatcagcaatgttggtggcgctggtgatg 641
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctatgggccgcaactggg 599
| || || ||||||||||||||||| ||| || |||||| |||||||||||||||||
Sbjct: 642 tgagatcagtgaagatcaaaggaacagagtctggctggctcgatatgggccgcaactggg 701
Query: 600 gccaggtgtggcacatcaact 620
||||| | |||||||||||||
Sbjct: 702 gccagatatggcacatcaact 722
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 448 ctgcaacccgcccaaccaccatttcctcctccccatccag 487
>gb|BJ277260.1|BJ277260 BJ277260 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr10k10 5', mRNA sequence
Length = 640
Score = 285 bits (144), Expect = 3e-075
Identities = 232/260 (89%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 138 cctcctcacggccctcgctgacggacaccagcacctgtttctcctacggctcctccgcgc 197
||||||| |||||||||| | ||| |||||||||| | |||||||||||||||||| |
Sbjct: 60 cctcctcccggccctcgccgccggccaccagcacccctc-ctcctacggctcctccgccc 118
Query: 198 tctccgattggcgccccgccaaggcatcctactacgccgccgaccccgaagacgccatcg 257
| ||||| |||||| ||||||| | ||||||| |||||||||||||| ||||||||||
Sbjct: 119 tatccgaatggcgcaacgccaagtcctcctacttcgccgccgaccccggggacgccatcg 178
Query: 258 gtggggcgtgcgggttcggggatctggggaaacacggctacgggatggcgacggtggggc 317
|||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 179 gtggcgcgtgcgggttcggggatctggggaagcacgggtacgggatggcaacggtggggc 238
Query: 318 tgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtgcg 377
|||||||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 239 tgagcacggcgctgttcgagcgcggcgccgcctgcgggggctgctacgaggtcaagtgcg 298
Query: 378 tcgaggacctcaagcactgc 397
| |||||||||||| |||||
Sbjct: 299 tggaggacctcaagtactgc 318
Score = 113 bits (57), Expect = 3e-023
Identities = 123/145 (84%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| ||||||| |
Sbjct: 473 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttctcgg 532
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| || |||||||| || ||||
Sbjct: 533 tctccgggaagagcttcttcttcacagtcctaatcagcaatgtcggtggcgctggcgatg 592
Query: 540 ttaggtctgtgaagatcaaaggaac 564
| || || |||||||||||||||||
Sbjct: 593 tcagatcagtgaagatcaaaggaac 617
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 399 ctgcaacccgcccaaccaccatttcctcctccccatccag 438
>gb|AY543533.1| Triticum aestivum expansin EXPA7 mRNA, complete cds
Length = 1031
Score = 285 bits (144), Expect = 3e-075
Identities = 232/260 (89%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 138 cctcctcacggccctcgctgacggacaccagcacctgtttctcctacggctcctccgcgc 197
||||||| |||||||||| | ||| |||||||||| | |||||||||||||||||| |
Sbjct: 92 cctcctcccggccctcgccgccggccaccagcacccctc-ctcctacggctcctccgccc 150
Query: 198 tctccgattggcgccccgccaaggcatcctactacgccgccgaccccgaagacgccatcg 257
| ||||| |||||| ||||||| | ||||||| |||||||||||||| ||||||||||
Sbjct: 151 tatccgaatggcgcaacgccaagtcctcctacttcgccgccgaccccggggacgccatcg 210
Query: 258 gtggggcgtgcgggttcggggatctggggaaacacggctacgggatggcgacggtggggc 317
|||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 211 gtggcgcgtgcgggttcggggatctggggaagcacgggtacgggatggcaacggtggggc 270
Query: 318 tgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtgcg 377
|||||||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 271 tgagcacggcgctgttcgagcgcggcgccgcctgcgggggctgctacgaggtcaagtgcg 330
Query: 378 tcgaggacctcaagcactgc 397
| |||||||||||| |||||
Sbjct: 331 tggaggacctcaagtactgc 350
Score = 184 bits (93), Expect = 8e-045
Identities = 276/337 (81%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| ||||||| |
Sbjct: 505 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttctcgg 564
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| || |||||||| || ||||
Sbjct: 565 tctccgggaagagcttcttcttcacagtcctaatcagcaatgtcggtggcgctggcgatg 624
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctatgggccgcaactggg 599
| || || ||||||||||||||||| ||| || |||||| |||||||||||||||||
Sbjct: 625 tcagatcagtgaagatcaaaggaacagagtctggctggctcgatatgggccgcaactggg 684
Query: 600 gccaggtgtggcacatcaactgtgacatgaggggacagcctctatcgtttgagctcagct 659
||||| | ||||||||||||| || | | || ||||| | || |||||||||| ||
Sbjct: 685 gccagatatggcacatcaacttagatctcacagggcagccggtgtcctttgagctcacct 744
Query: 660 caagcgatagcaagacgctgaccagtttcaacgtcgtgcccaaggattgggagttcggca 719
| || || ||| |||| |||||| ||| ||||| |||||||||||||||||||| ||||
Sbjct: 745 cgagtgacggcacgacgatgaccaattttaacgttgtgcccaaggattgggagtttggca 804
Query: 720 agacatacacggggaagcagtttcttctgtagagaat 756
| |||||||| || ||||| || || || ||||||||
Sbjct: 805 aaacatacaccggcaagcaattcctgctctagagaat 841
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 431 ctgcaacccgcccaaccaccatttcctcctccccatccag 470
>gb|BM137817.1|BM137817 WHE0471_G04_M07ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0471_G04_M07,
mRNA sequence
Length = 392
Score = 283 bits (143), Expect = 1e-074
Identities = 231/259 (89%), Gaps = 1/259 (0%)
Strand = Plus / Plus
Query: 138 cctcctcacggccctcgctgacggacaccagcacctgtttctcctacggctcctccgcgc 197
||||||| ||| |||||| | |||||||||||||| | |||||||||||||||||| |
Sbjct: 110 cctcctcccggacctcgccgccggacaccagcacccctc-ctcctacggctcctccgccc 168
Query: 198 tctccgattggcgccccgccaaggcatcctactacgccgccgaccccgaagacgccatcg 257
||| ||| ||| || ||||||| | ||||||| |||||||||||||| |||||||||||
Sbjct: 169 tctacgaatggggcaacgccaagtcctcctacttcgccgccgaccccggagacgccatcg 228
Query: 258 gtggggcgtgcgggttcggggatctggggaaacacggctacgggatggcgacggtggggc 317
|||| |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct: 229 gtggcgcgtgcgggttcggggatctggggaagcaccggtacgggatggcgacggtggggc 288
Query: 318 tgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtgcg 377
|||||||||||||||| ||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 289 tgagcacggcgctgttcgagcgcggcgccgcctgcagcggctgctacgaggtcaagtgcg 348
Query: 378 tcgaggacctcaagcactg 396
| |||||||||||| ||||
Sbjct: 349 tggaggacctcaagtactg 367
>gb|AL815146.1|AL815146 AL815146 h:116 Triticum aestivum cDNA clone G06_h116_plate_8, mRNA
sequence
Length = 489
Score = 280 bits (141), Expect = 2e-073
Identities = 202/221 (91%), Gaps = 1/221 (0%)
Strand = Plus / Plus
Query: 178 ctcctacggctcctccgcgctctccgattggcgccccgccaaggcatcctactacgccgc 237
|||||||||||||||||| |||||||| |||||| |||| || | ||||||| ||||||
Sbjct: 25 ctcctacggctcctccgccctctccgaatggcgcaacgcccagtcctcctacttcgccgc 84
Query: 238 cgacccc-gaagacgccatcggtggggcgtgcgggttcggggatctggggaaacacggct 296
||||||| | ||||||||||||| | |||||||||||||||||||||||||| ||||| |
Sbjct: 85 cgacccccggagacgccatcggtagcgcgtgcgggttcggggatctggggaagcacgggt 144
Query: 297 acgggatggcgacggtggggctgagcacggcgctgtttgagcgcggcgcggcgtgcggcg 356
||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 145 acgggatggcgacggtggggctgagcacggcgctgttcgagcgcggcgccgcctgcggcg 204
Query: 357 gctgctacgaggtcaagtgcgtcgaggacctcaagcactgc 397
|||||||||||||||||||||| |||||||||||| |||||
Sbjct: 205 gctgctacgaggtcaagtgcgtggaggacctcaagtactgc 245
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 326 ctgcaacccgcccaaccaccatttcctcctccccatccag 365
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctc 477
|||||||||||||||||||||| ||| ||||||| || ||||| || ||| |||||||
Sbjct: 400 tcatgcccatccagtaccgccgcgttcagtgccttcgtgaaggcggcgtgcggttctc 457
>gb|CK214305.1|CK214305 FGAS026228 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1088
Score = 246 bits (124), Expect = 3e-063
Identities = 154/164 (93%)
Strand = Plus / Plus
Query: 234 ccgccgaccccgaagacgccatcggtggggcgtgcgggttcggggatctggggaaacacg 293
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 301 ccgccgaccccggagacgccatcggtggcgcgtgcgggttcggggatctggggaagcacg 360
Query: 294 gctacgggatggcgacggtggggctgagcacggcgctgtttgagcgcggcgcggcgtgcg 353
| |||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||
Sbjct: 361 ggtacgggatggcgaccgtggggctgagcacggcgctgttcgagcgcggcgccgcctgcg 420
Query: 354 gcggctgctacgaggtcaagtgcgtcgaggacctcaagcactgc 397
||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 421 gcggctgctacgaggtcaagtgcgtggaggacctcaagtactgc 464
Score = 48.1 bits (24), Expect = 0.001
Identities = 96/119 (80%), Gaps = 7/119 (5%)
Strand = Plus / Plus
Query: 93 gggagccatggctccgccgctcctgctcttcttcctcctcctccccctcctcacggccct 152
||||||||||||||| ||||||| || ||||| || || ||||||| |||||||
Sbjct: 167 gggagccatggctcccccgctcc------tcctcctcgtcgtcttcctcctcccggccct 220
Query: 153 cgctgacggacaccagcacctgtttctcctacggctcctccgcgctctccgattggcgc 211
||| | ||| |||||||||| | ||||||||| |||||||| |||||||| ||||||
Sbjct: 221 cgccgccggccaccagcacc-cctcctcctacgggtcctccgccctctccgaatggcgc 278
>gb|CA657384.1|CA657384 wlm0.pk0037.b5 wlm0 Triticum aestivum cDNA clone wlm0.pk0037.b5 5'
end, mRNA sequence
Length = 488
Score = 242 bits (122), Expect = 4e-062
Identities = 161/174 (92%)
Strand = Plus / Plus
Query: 224 tcctactacgccgccgaccccgaagacgccatcggtggggcgtgcgggttcggggatctg 283
||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 2 tcctacttcgccgccgaccccggggacgccatcggtggcgcgtgcgggttcggggatctg 61
Query: 284 gggaaacacggctacgggatggcgacggtggggctgagcacggcgctgtttgagcgcggc 343
||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 62 gggaagcacgggtacgggatggcaacggtggggctgagcacggcgctgttcgagcgcggc 121
Query: 344 gcggcgtgcggcggctgctacgaggtcaagtgcgtcgaggacctcaagcactgc 397
|| || ||||| ||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 122 gccgcctgcgggggctgctacgaggtcaagtgcgtggaggacctcaagtactgc 175
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 257 ctgcaacccgcccaaccaccatttcctcctccccatccag 296
Score = 44.1 bits (22), Expect = 0.020
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcct 453
|||||||||||||||| ||||| || ||||||||
Sbjct: 331 tcatgcccatccagtaacgccgcgtcaagtgcct 364
>gb|DR739498.1|DR739498 FGAS084715 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1110
Score = 192 bits (97), Expect = 3e-047
Identities = 277/337 (82%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| |||| || |
Sbjct: 203 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttttcgg 262
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 263 tctccgggaagagcttcttcttcacagtcctaatcagcaatgttggtggcgctggtgatg 322
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctatgggccgcaactggg 599
| || || ||||||||||||||||| ||| || |||||| |||||||||||||||||
Sbjct: 323 tgagatcagtgaagatcaaaggaacagagtctggctggctcgatatgggccgcaactggg 382
Query: 600 gccaggtgtggcacatcaactgtgacatgaggggacagcctctatcgtttgagctcagct 659
||||| | ||||||||||||| || | | || ||||| | || |||||||||| ||
Sbjct: 383 gccagatatggcacatcaacttagatctcacagggcagccggtgtcctttgagctcacct 442
Query: 660 caagcgatagcaagacgctgaccagtttcaacgtcgtgcccaaggattgggagttcggca 719
| || || ||| ||| |||||| ||||||||| |||||||||||||||||||| ||||
Sbjct: 443 cgagtgacggcacgacaatgaccaatttcaacgttgtgcccaaggattgggagtttggca 502
Query: 720 agacatacacggggaagcagtttcttctgtagagaat 756
| |||||||| || ||||| || || || ||||||||
Sbjct: 503 aaacatacactggcaagcaattcctgctctagagaat 539
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 129 ctgcaacccgcccaaccaccatttcctcctccccatccag 168
Score = 40.1 bits (20), Expect = 0.30
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 93 gggagccatggctccgccgctcct 116
||||||||||||||| ||||||||
Sbjct: 76 gggagccatggctcccccgctcct 99
>gb|BJ282446.1|BJ282446 BJ282446 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr10k10 3', mRNA sequence
Length = 617
Score = 184 bits (93), Expect = 8e-045
Identities = 276/337 (81%)
Strand = Plus / Minus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| ||||||| |
Sbjct: 611 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttctcgg 552
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| || |||||||| || ||||
Sbjct: 551 tctccgggaagagcttcttcttcacagtcctaatcagcaatgtcggtggcgctggcgatg 492
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctatgggccgcaactggg 599
| || || ||||||||||||||||| ||| || |||||| |||||||||||||||||
Sbjct: 491 tcagatcagtgaagatcaaaggaacagagtctggctggctcgatatgggccgcaactggg 432
Query: 600 gccaggtgtggcacatcaactgtgacatgaggggacagcctctatcgtttgagctcagct 659
||||| | ||||||||||||| || | | || ||||| | || |||||||||| ||
Sbjct: 431 gccagatatggcacatcaacttagatctcacagggcagccggtgtcctttgagctcacct 372
Query: 660 caagcgatagcaagacgctgaccagtttcaacgtcgtgcccaaggattgggagttcggca 719
| || || ||| |||| |||||| ||| ||||| |||||||||||||||||||| ||||
Sbjct: 371 cgagtgacggcacgacgatgaccaattttaacgttgtgcccaaggattgggagtttggca 312
Query: 720 agacatacacggggaagcagtttcttctgtagagaat 756
| |||||||| || ||||| || || || ||||||||
Sbjct: 311 aaacatacaccggcaagcaattcctgctctagagaat 275
>gb|AJ611195.1|AJ611195 AJ611195 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04443R, mRNA
sequence
Length = 565
Score = 178 bits (90), Expect = 5e-043
Identities = 275/337 (81%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| ||||||| |
Sbjct: 159 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttctcgg 218
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| || |||||||| || ||||
Sbjct: 219 tctccgggaagagcttcttcttcacagtcctaatcagcaatgtcggtggcgctggcgatg 278
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctatgggccgcaactggg 599
| || || ||||||||||||||||| ||| || |||||| |||||||||||||||||
Sbjct: 279 tcagatcagtgaagatcaaaggaacagagtctggctggctcgatatgggccgcaactggg 338
Query: 600 gccaggtgtggcacatcaactgtgacatgaggggacagcctctatcgtttgagctcagct 659
||||| | ||||||||||||| || | | || ||||| | || |||||||||| ||
Sbjct: 339 gccagatatggcacatcaacttagatctcacagggcagccggtgtcctttgagctcacct 398
Query: 660 caagcgatagcaagacgctgaccagtttcaacgtcgtgcccaaggattgggagttcggca 719
| || || ||| |||| | |||| ||| ||||| |||||||||||||||||||| ||||
Sbjct: 399 cgagtgacggcacgacgatnaccaattttaacgttgtgcccaaggattgggagtttggca 458
Query: 720 agacatacacggggaagcagtttcttctgtagagaat 756
| |||||||| || ||||| || || || ||||||||
Sbjct: 459 aaacatacaccggcaagcaattcctgctctagagaat 495
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 85 ctgcaacccgcccaaccaccatttcctcctccccatccag 124
>gb|BQ161707.1|BQ161707 WHE0471_G04_M07ZT Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0471_G04_M07,
mRNA sequence
Length = 535
Score = 174 bits (88), Expect = 8e-042
Identities = 220/264 (83%)
Strand = Plus / Minus
Query: 493 cttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatgttaggtctgtgaa 552
||||||||||||||||||||||||||| ||||||||||| |||||||| || || |||||
Sbjct: 532 cttcttcttcacagtcctaatcagcaatgttggtggcgctggtgatgtgagatcagtgaa 473
Query: 553 gatcaaaggaacggagctaggatggctccctatgggccgcaactggggccaggtgtggca 612
|||||||||||| ||| || |||||| |||||||||||||||||||||| | |||||
Sbjct: 472 gatcaaaggaacagagtctggctggctcgatatgggccgcaactggggccagatatggca 413
Query: 613 catcaactgtgacatgaggggacagcctctatcgtttgagctcagctcaagcgatagcaa 672
|||||||| || | | || ||||| | || |||||||||| ||| || || |||
Sbjct: 412 catcaacttagatctcacagggcagccggtgtcctttgagctcacctcgagtgacggcac 353
Query: 673 gacgctgaccagtttcaacgtcgtgcccaaggattgggagttcggcaagacatacacggg 732
||| |||||| ||||||||| |||||||||||||||||||| ||||| |||||||| ||
Sbjct: 352 gacaatgaccaatttcaacgttgtgcccaaggattgggagtttggcaaaacatacactgg 293
Query: 733 gaagcagtttcttctgtagagaat 756
||||| || || || ||||||||
Sbjct: 292 caagcaattcctgctctagagaat 269
>gb|BJ218486.1|BJ218486 BJ218486 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh37o17 3', mRNA sequence
Length = 614
Score = 168 bits (85), Expect = 5e-040
Identities = 274/337 (81%)
Strand = Plus / Minus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| ||||||| |
Sbjct: 442 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttctcgg 383
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| || || ||||| || ||||
Sbjct: 382 tctccgggaagagcttcttcttcacagtcctaatcagcaatgtcggcggcgctggcgatg 323
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctatgggccgcaactggg 599
| || || ||||||||||||||||| ||| || |||||| ||||||||||||||||
Sbjct: 322 tcagatcagtgaagatcaaaggaacagagtctggctggctcgacatgggccgcaactggg 263
Query: 600 gccaggtgtggcacatcaactgtgacatgaggggacagcctctatcgtttgagctcagct 659
||||| | ||||||||||||| || | | || ||||| | || |||||||||| ||
Sbjct: 262 gccagatatggcacatcaacttagatctcacagggcagccggtgtcctttgagctcacct 203
Query: 660 caagcgatagcaagacgctgaccagtttcaacgtcgtgcccaaggattgggagttcggca 719
| || || ||| ||| |||||| ||||||||| |||||||||||||||||||| ||||
Sbjct: 202 cgagtgacggcacgacaatgaccaatttcaacgttgtgcccaaggattgggagtttggca 143
Query: 720 agacatacacggggaagcagtttcttctgtagagaat 756
| |||||||| || ||||| || || || ||||||||
Sbjct: 142 aaacatacaccggcaagcaattcctgctctagagaat 106
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||||||||||||||||||||||||| | |||||||||
Sbjct: 516 ctgcaacccgcccaaccaccatttcctcctccccatccag 477
>gb|BJ238210.1|BJ238210 BJ238210 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe1a02 3', mRNA sequence
Length = 596
Score = 168 bits (85), Expect = 5e-040
Identities = 274/337 (81%)
Strand = Plus / Minus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| ||||||| |
Sbjct: 594 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttctcgg 535
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| || || ||||| || ||||
Sbjct: 534 tctccgggaagagcttcttcttcacagtcctaatcagcaatgtcggcggcgctggcgatg 475
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctatgggccgcaactggg 599
| || || ||||||||||||||||| ||| || |||||| ||||||||||||||||
Sbjct: 474 tcagatcagtgaagatcaaaggaacagagtctggctggctcgacatgggccgcaactggg 415
Query: 600 gccaggtgtggcacatcaactgtgacatgaggggacagcctctatcgtttgagctcagct 659
||||| | ||||||||||||| || | | || ||||| | || |||||||||| ||
Sbjct: 414 gccagatatggcacatcaacttagatctcacagggcagccggtgtcctttgagctcacct 355
Query: 660 caagcgatagcaagacgctgaccagtttcaacgtcgtgcccaaggattgggagttcggca 719
| || || ||| ||| |||||| ||||||||| |||||||||||||||||||| ||||
Sbjct: 354 cgagtgacggcacgacaatgaccaatttcaacgttgtgcccaaggattgggagtttggca 295
Query: 720 agacatacacggggaagcagtttcttctgtagagaat 756
| |||||||| || ||||| || || || ||||||||
Sbjct: 294 aaacatacaccggcaagcaattcctgctctagagaat 258
>gb|CA602791.1|CA602791 wr1.pk0008.h8 wr1 Triticum aestivum cDNA clone wr1.pk0008.h8 5'
end, mRNA sequence
Length = 512
Score = 168 bits (85), Expect = 5e-040
Identities = 274/337 (81%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
|||||||||||||||||||||| || |||||||| || ||||| || ||| ||||||| |
Sbjct: 51 tcatgcccatccagtaccgccgcgtcaagtgccttcgtgaaggcggcgtgcggttctcgg 110
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | ||||||||||||||||||||||||||| || || ||||| || ||||
Sbjct: 111 tctccgggaagagcttcttcttcacagtcctaatcagcaatgtcggcggcgctggcgatg 170
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctatgggccgcaactggg 599
| || || ||||||||||||||||| ||| || |||||| ||||||||||||||||
Sbjct: 171 tcagatcagtgaagatcaaaggaacagagtctggctggctcgacatgggccgcaactggg 230
Query: 600 gccaggtgtggcacatcaactgtgacatgaggggacagcctctatcgtttgagctcagct 659
||||| | ||||||||||||| || | | || ||||| | || |||||||||| ||
Sbjct: 231 gccagatatggcacatcaacttagatctcacagggcagccggtgtcctttgagctcacct 290
Query: 660 caagcgatagcaagacgctgaccagtttcaacgtcgtgcccaaggattgggagttcggca 719
| || || ||| ||| |||||| ||||||||| |||||||||||||||||||| ||||
Sbjct: 291 cgagtgacggcacgacaatgaccaatttcaacgttgtgcccaaggattgggagtttggca 350
Query: 720 agacatacacggggaagcagtttcttctgtagagaat 756
| |||||||| || ||||| || || || ||||||||
Sbjct: 351 aaacatacaccggcaagcaattcctgctctagagaat 387
>gb|CD492147.1|CD492147 WHE2476_H10_O20ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2476_H10_O20, mRNA sequence
Length = 749
Score = 168 bits (85), Expect = 5e-040
Identities = 275/337 (81%), Gaps = 1/337 (0%)
Strand = Plus / Minus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
||||||||||||||||||||||||| |||||||| || ||||| |||||| |||||||
Sbjct: 687 tcatgcccatccagtaccgccgtgtcaagtgccttcgtgaaggcggtgtgcggttctcgt 628
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatcagcaacgttggtggcgcgggtgatg 539
|| ||| | | |||||||||||||| ||||||||||| || |||||||| || ||||
Sbjct: 627 tctccgggaag-agttcttcttcacagtactaatcagcaatgtcggtggcgctggcgatg 569
Query: 540 ttaggtctgtgaagatcaaaggaacggagctaggatggctccctatgggccgcaactggg 599
| || || ||||||||||||||||| ||| || |||||| |||||||||||||||||
Sbjct: 568 tcagatcagtgaagatcaaaggaacagagtctggctggctcgatatgggccgcaactggg 509
Query: 600 gccaggtgtggcacatcaactgtgacatgaggggacagcctctatcgtttgagctcagct 659
||||| | ||||||||||||| || | | || ||||| | || |||||||||| |
Sbjct: 508 gccagatatggcacatcaacttagatctcacagggcagccggtgtcctttgagctcactt 449
Query: 660 caagcgatagcaagacgctgaccagtttcaacgtcgtgcccaaggattgggagttcggca 719
| || || ||| |||| |||||| ||||||||| ||||||||||||||||| || ||||
Sbjct: 448 cgagtgacggcacgacgatgaccaatttcaacgttgtgcccaaggattgggaatttggca 389
Query: 720 agacatacacggggaagcagtttcttctgtagagaat 756
| |||||||| || ||||| || || || ||||||||
Sbjct: 388 aaacatacaccggcaagcaattcctgctctagagaat 352
Score = 42.1 bits (21), Expect = 0.077
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 942 agaggcttgatgtatcattca 962
|||||||||||||||||||||
Sbjct: 102 agaggcttgatgtatcattca 82
Score = 40.1 bits (20), Expect = 0.30
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 406 caaccaccatttcctcatgcccatccag 433
|||||||||||||||| | |||||||||
Sbjct: 749 caaccaccatttcctcctccccatccag 722
>gb|DR734131.1|DR734131 FGAS079887 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 871
Score = 97.6 bits (49), Expect = 2e-018
Identities = 163/201 (81%)
Strand = Plus / Plus
Query: 197 ctctccgattggcgccccgccaaggcatcctactacgccgccgaccccgaagacgccatc 256
|||||||| ||| || ||||||| | ||||||| | |||||||||||| | ||||||||
Sbjct: 299 ctctccgaatggagcaacgccaagtcctcctacttcaccgccgaccccggatacgccatc 358
Query: 257 ggtggggcgtgcgggttcggggatctggggaaacacggctacgggatggcgacggtgggg 316
|| |||||||| ||||| ||||||| ||| ||||| |||||||||| |||||||||
Sbjct: 359 tctgacgcgtgcggattcggcgatctggtgaaccacgggaacgggatggcaacggtgggg 418
Query: 317 ctgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtgc 376
|||| |||| |||||| |||||| || | || || || | ||||||| | | |||||||
Sbjct: 419 ctgatcacgatgctgttcgagcgcagcaccgcctgaggagactgctacaaagccaagtgc 478
Query: 377 gtcgaggacctcaagcactgc 397
|| ||||||| ||| ||||||
Sbjct: 479 gtggaggaccacaatcactgc 499
Score = 42.1 bits (21), Expect = 0.077
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 583 tatgggccgcaactggggcca 603
|||||||||||||||||||||
Sbjct: 816 tatgggccgcaactggggcca 836
>gb|CA654193.1|CA654193 wre1n.pk163.a6 wre1n Triticum aestivum cDNA clone wre1n.pk163.a6 5'
end, mRNA sequence
Length = 289
Score = 71.9 bits (36), Expect = 9e-011
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 673 gacgctgaccagtttcaacgtcgtgcccaaggattgggagttcggcaagacatacacggg 732
|||| |||||| ||| ||||| |||||||||||||||||||| ||||| |||||||| ||
Sbjct: 288 gacgatgaccaattttaacgttgtgcccaaggattgggagtttggcaaaacatacaccgg 229
Query: 733 gaagcagtttcttctgtagagaat 756
||||| || || || ||||||||
Sbjct: 228 caagcaattcctgctctagagaat 205
>gb|BG314391.1|BG314391 WHE2476_H10_O20ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2476_H10_O20,
mRNA sequence
Length = 227
Score = 69.9 bits (35), Expect = 3e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 420 tcatgcccatccagtaccgccgtgttaagtgcctccgcgaaggtggtgtgaggttctccg 479
||||||||||||||||||||||||| |||||||| || ||| | ||||| ||||||| |
Sbjct: 133 tcatgcccatccagtaccgccgtgtcaagtgccttcgtgaatgctgtgtgcggttctcgg 192
Query: 480 tcaacggtcggcacttcttcttcacagtcctaatc 514
|| ||| || ||||||||||||||| ||||||
Sbjct: 193 tctccggggggagcttcttcttcacagtactaatc 227
Score = 56.0 bits (28), Expect = 5e-006
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 394 ctgcaacccgcccaaccaccatttcctcatgcccatccag 433
|||||| ||||||||||||||||||||| | |||||||||
Sbjct: 59 ctgcaatccgcccaaccaccatttcctcctccccatccag 98
>gb|CD873319.1|CD873319 AZO2.122O05F010208 AZO2 Triticum aestivum cDNA clone AZO2122O05,
mRNA sequence
Length = 421
Score = 50.1 bits (25), Expect = 3e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 700 caaggattgggagttcggcaagacatacacggggaagcagtttcttctgtagagaat 756
||||||||||||||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 1 caaggattgggagtttggcaaaacatacactggcaagcaattcctgctctagagaat 57
Score = 40.1 bits (20), Expect = 0.30
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 942 agaggcttgatgtatcattc 961
||||||||||||||||||||
Sbjct: 314 agaggcttgatgtatcattc 333
>gb|BE517372.1|BE517372 WHE0625_C01_E01ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0625_C01_E01, mRNA sequence
Length = 572
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 111 gctcctgctcttcttcctcctcctcccc 138
|||||| |||||||||||||||||||||
Sbjct: 193 gctcctcctcttcttcctcctcctcccc 220
>gb|BE500565.1|BE500565 WHE0987-0990_E20_E20ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0987-0990_E20_E20, mRNA
sequence
Length = 424
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tcttcttcctcctcctccccctc 141
|||||||||||||||||||||||
Sbjct: 6 tcttcttcctcctcctccccctc 28
>gb|BJ248015.1|BJ248015 BJ248015 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4j04 5', mRNA sequence
Length = 679
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 590 cgcaactggggccaggtgtggca 612
|||||||||||||||||||||||
Sbjct: 657 cgcaactggggccaggtgtggca 679
>gb|BJ254143.1|BJ254143 BJ254143 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4j04 3', mRNA sequence
Length = 679
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 590 cgcaactggggccaggtgtggca 612
|||||||||||||||||||||||
Sbjct: 305 cgcaactggggccaggtgtggca 283
>gb|BU100869.1|BU100869 WHE3358_G12_N24ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3358_G12_N24,
mRNA sequence
Length = 653
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tcttcttcctcctcctccccctc 141
|||||||||||||||||||||||
Sbjct: 18 tcttcttcctcctcctccccctc 40
>gb|CA733111.1|CA733111 wlp1c.pk007.h16 wlp1c Triticum aestivum cDNA clone wlp1c.pk007.h16
5' end, mRNA sequence
Length = 604
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 tcttcttcctcctcctccccctc 141
|||||||||||||||||||||||
Sbjct: 65 tcttcttcctcctcctccccctc 87
>gb|CD907538.1|CD907538 G468.107E14F010814 G468 Triticum aestivum cDNA clone G468107E14,
mRNA sequence
Length = 540
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 119 tcttcttcctcctcctccccctcctca 145
|||||||||||||||||| ||||||||
Sbjct: 209 tcttcttcctcctcctcctcctcctca 183
>gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, complete cds
Length = 1201
Score = 46.1 bits (23), Expect = 0.005
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 316 gctgagcacggcgctgtttgagcgcggcgcggcgtgcgg 354
|||||||||||||||||| || |||||||||||||||
Sbjct: 249 gctgagcacggcgctgttcgacgacggcgcggcgtgcgg 287
>gb|BJ279055.1|BJ279055 BJ279055 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr1a03 5', mRNA sequence
Length = 333
Score = 44.1 bits (22), Expect = 0.020
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 112 ctcctgctcttcttcctcctcctccccctc 141
|||| |||||||||||||||||||| ||||
Sbjct: 4 ctccagctcttcttcctcctcctcctcctc 33
>gb|BQ240141.1|BQ240141 TaE05021F01R TaE05 Triticum aestivum cDNA clone TaE05021F01R, mRNA
sequence
Length = 596
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 cttcctcctcctccccctcctc 144
||||||||||||||||||||||
Sbjct: 47 cttcctcctcctccccctcctc 68
>gb|CA498759.1|CA498759 WHE3247_D02_H03ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3247_D02_H03, mRNA sequence
Length = 411
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 cttcctcctcctccccctcctc 144
||||||||||||||||||||||
Sbjct: 54 cttcctcctcctccccctcctc 75
>gb|CA682769.1|CA682769 wlm96.pk0006.g1 wlm96 Triticum aestivum cDNA clone wlm96.pk0006.g1
5' end, mRNA sequence
Length = 649
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 cttcctcctcctccccctcctc 144
||||||||||||||||||||||
Sbjct: 26 cttcctcctcctccccctcctc 47
>gb|CA713604.1|CA713604 wdk3c.pk020.f16 wdk3c Triticum aestivum cDNA clone wdk3c.pk020.f16
5' end, mRNA sequence
Length = 355
Score = 44.1 bits (22), Expect = 0.020
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 112 ctcctgctcttcttcctcctcctccccctc 141
|||| |||||||||||||||||||| ||||
Sbjct: 37 ctccagctcttcttcctcctcctcctcctc 66
>gb|CA717356.1|CA717356 wdk4c.pk005.m13 wdk4c Triticum aestivum cDNA clone wdk4c.pk005.m13
5' end, mRNA sequence
Length = 346
Score = 44.1 bits (22), Expect = 0.020
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 112 ctcctgctcttcttcctcctcctccccctc 141
|||| |||||||||||||||||||| ||||
Sbjct: 44 ctccagctcttcttcctcctcctcctcctc 73
>gb|CD902983.1|CD902983 G356.108L20F010919 G356 Triticum aestivum cDNA clone G356108L20,
mRNA sequence
Length = 462
Score = 44.1 bits (22), Expect = 0.020
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 119 tcttcttcctcctcctccccctcctc 144
|||||||||||||||||| |||||||
Sbjct: 50 tcttcttcctcctcctcctcctcctc 25
>gb|CK194728.1|CK194728 FGAS003160 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 cttcctcctcctccccctcctc 144
||||||||||||||||||||||
Sbjct: 156 cttcctcctcctccccctcctc 177
>gb|CV766372.1|CV766372 FGAS060759 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 816
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 cttcctcctcctccccctcctc 144
||||||||||||||||||||||
Sbjct: 145 cttcctcctcctccccctcctc 166
>gb|CV767540.1|CV767540 FGAS061930 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 819
Score = 44.1 bits (22), Expect = 0.020
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 cttcctcctcctccccctcctc 144
||||||||||||||||||||||
Sbjct: 177 cttcctcctcctccccctcctc 198
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
Length = 285506
Score = 44.1 bits (22), Expect = 0.020
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 119 tcttcttcctcctcctccccctcctc 144
|||||||||||||||||| |||||||
Sbjct: 100494 tcttcttcctcctcctcctcctcctc 100519
>gb|CL901377.1|CL901377 CSHC0752 1639HC library Triticum aestivum genomic clone
1639HC05D17, DNA sequence
Length = 755
Score = 42.1 bits (21), Expect = 0.077
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 119 tcttcttcctcctcctccccctcct 143
|||||||||||||||||| ||||||
Sbjct: 328 tcttcttcctcctcctcctcctcct 304
>gb|BE498867.1|BE498867 WHE0966_A06_B12ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0966_A06_B12, mRNA sequence
Length = 416
Score = 42.1 bits (21), Expect = 0.077
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 316 gctgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtg 375
|||||||||||||||||| | ||||||||||||||| ||||||||| |||||||
Sbjct: 273 gctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcgtgctacgagctcaagtg 332
Query: 376 c 376
|
Sbjct: 333 c 333
>gb|BF201531.1|BF201531 WHE1771_F09_K17ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1771_F09_K17, mRNA sequence
Length = 442
Score = 42.1 bits (21), Expect = 0.077
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 316 gctgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtg 375
|||||||||||||||||| | ||||||||||||||| ||||||||| |||||||
Sbjct: 260 gctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcgtgctacgagctcaagtg 319
Query: 376 c 376
|
Sbjct: 320 c 320
>gb|BF484994.1|BF484994 WHE1792_A11_A22ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1792_A11_A22, mRNA sequence
Length = 449
Score = 42.1 bits (21), Expect = 0.077
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 316 gctgagcacggcgctgtttgagcgcggcgcggcgtgcggcggctgctacgaggtcaagtg 375
|||||||||||||||||| | ||||||||||||||| ||||||||| |||||||
Sbjct: 250 gctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcgtgctacgagctcaagtg 309
Query: 376 c 376
|
Sbjct: 310 c 310
>gb|BQ803760.1|BQ803760 WHE2841_E08_I15ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2841_E08_I15, mRNA
sequence
Length = 468
Score = 42.1 bits (21), Expect = 0.077
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 123 cttcctcctcctccccctcct 143
|||||||||||||||||||||
Sbjct: 130 cttcctcctcctccccctcct 110
>gb|BQ805422.1|BQ805422 WHE3566_G08_N16ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3566_G08_N16, mRNA sequence
Length = 818
Score = 42.1 bits (21), Expect = 0.077
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 122 tcttcctcctcctccccctcc 142
|||||||||||||||||||||
Sbjct: 63 tcttcctcctcctccccctcc 83
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 287,399
Number of Sequences: 636343
Number of extensions: 287399
Number of successful extensions: 95364
Number of sequences better than 0.5: 106
Number of HSP's better than 0.5 without gapping: 95
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 94955
Number of HSP's gapped (non-prelim): 348
length of query: 1061
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1041
effective length of database: 354,513,379
effective search space: 369048427539
effective search space used: 369048427539
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)