BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2486118.2.1
(635 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ266003.1|BJ266003 BJ266003 Y. Ogihara unpublished cDNA... 454 e-126
gb|BJ321461.1|BJ321461 BJ321461 Y. Ogihara unpublished cDNA... 454 e-126
gb|BQ753218.1|BQ753218 WHE4124_D10_H20ZS Wheat salt-stresse... 454 e-126
emb|AX756302.1| Sequence 1041 from Patent WO03000905 454 e-126
gb|BJ254056.1|BJ254056 BJ254056 Y. Ogihara unpublished cDNA... 448 e-124
gb|BQ743340.1|BQ743340 WHE4102_H02_O04ZS Wheat salt-stresse... 448 e-124
gb|CA598658.1|CA598658 wyr1c.pk002.h22 wyr1c Triticum aesti... 448 e-124
gb|BG607364.1|BG607364 WHE2471_F12_K23ZS Triticum monococcu... 440 e-122
gb|CK195305.1|CK195305 FGAS003744 Triticum aestivum FGAS: L... 418 e-115
gb|CA652128.1|CA652128 wre1n.pk178.g12 wre1n Triticum aesti... 375 e-102
gb|CD929632.1|CD929632 GR45.108L13R010612 GR45 Triticum aes... 311 3e-083
gb|CV066003.1|CV066003 WNEL29d6 Wheat EST endosperm library... 307 5e-082
gb|CD938838.1|CD938838 OV.111D10R010412 OV Triticum aestivu... 297 5e-079
gb|CD929631.1|CD929631 GR45.108L13F010413 GR45 Triticum aes... 289 1e-076
gb|BQ237973.1|BQ237973 TaE05009H10F TaE05 Triticum aestivum... 280 1e-073
gb|BG608401.1|BG608401 WHE2498_H08_P16ZS Triticum monococcu... 250 1e-064
gb|CK194966.1|CK194966 FGAS003400 Triticum aestivum FGAS: L... 240 1e-061
gb|CD931463.1|CD931463 GR45.114J03R010613 GR45 Triticum aes... 115 4e-024
gb|BQ237630.1|BQ237630 TaE05014D01F TaE05 Triticum aestivum... 113 2e-023
gb|CF133837.1|CF133837 WHE4364_C04_E08ZT Wheat meiotic flor... 113 2e-023
gb|BQ166626.1|BQ166626 WHE0906_G11_M22ZT Wheat 5-15 DAP spi... 103 1e-020
gb|BJ318706.1|BJ318706 BJ318706 Y. Ogihara unpublished cDNA... 74 1e-011
gb|BJ265369.1|BJ265369 BJ265369 Y. Ogihara unpublished cDNA... 66 3e-009
gb|BJ277759.1|BJ277759 BJ277759 Y. Ogihara unpublished cDNA... 66 3e-009
gb|BJ321571.1|BJ321571 BJ321571 Y. Ogihara unpublished cDNA... 66 3e-009
gb|CA709780.1|CA709780 wdk2c.pk013.l9 wdk2c Triticum aestiv... 66 3e-009
gb|BJ219357.1|BJ219357 BJ219357 Y. Ogihara unpublished cDNA... 64 1e-008
gb|BQ578610.1|BQ578610 WHE0307_E11_J21ZS Wheat unstressed s... 64 1e-008
gb|CA601278.1|CA601278 wl1.pk0011.e7 wl1 Triticum aestivum ... 64 1e-008
gb|CA618417.1|CA618417 wl1n.pk0033.e7 wl1n Triticum aestivu... 64 1e-008
gb|CD939844.1|CD939844 OV.115H07F010313 OV Triticum aestivu... 64 1e-008
gb|CK214519.1|CK214519 FGAS026446 Triticum aestivum FGAS: L... 64 1e-008
gb|CD881364.1|CD881364 F1.102P11F010328 F1 Triticum aestivu... 58 8e-007
gb|BQ902843.1|BQ902843 Ta03_02c11_R Ta03_AAFC_ECORC_Fusariu... 52 5e-005
gb|BJ276952.1|BJ276952 BJ276952 Y. Ogihara unpublished cDNA... 50 2e-004
gb|BE470727.1|BE470727 WHE0279_F10_K19ZS Wheat drought-stre... 48 7e-004
gb|BG606306.1|BG606306 WHE2959_C09_E17ZS Wheat dormant embr... 48 7e-004
gb|BI751378.1|BI751378 Ta01_16h11_R Ta01_AAFC_ECORC_Fusariu... 48 7e-004
gb|BQ483336.1|BQ483336 WHE3507_D04_H07ZS Wheat unstressed r... 48 7e-004
gb|AL828184.1|AL828184 AL828184 p:436 Triticum aestivum cDN... 48 7e-004
gb|AL829321.1|AL829321 AL829321 q:141 Triticum aestivum cDN... 48 7e-004
gb|CA501152.1|CA501152 WHE4029_H06_O11ZT Wheat meiotic anth... 48 7e-004
gb|CA502290.1|CA502290 WHE4045_E03_I05ZT Wheat meiotic anth... 48 7e-004
gb|CA607764.1|CA607764 wr1.pk0082.h9 wr1 Triticum aestivum ... 48 7e-004
gb|CA710708.1|CA710708 wdk2c.pk016.n20 wdk2c Triticum aesti... 48 7e-004
gb|CD887966.1|CD887966 G118.106L09R010925 G118 Triticum aes... 48 7e-004
gb|CK164582.1|CK164582 FGAS048496 Triticum aestivum FGAS: T... 48 7e-004
gb|BJ319137.1|BJ319137 BJ319137 Y. Ogihara unpublished cDNA... 44 0.012
gb|CA606671.1|CA606671 wr1.pk0070.a10 wr1 Triticum aestivum... 44 0.012
gb|CA651158.1|CA651158 wre1n.pk175.e6 wre1n Triticum aestiv... 44 0.012
gb|CA710623.1|CA710623 wdk2c.pk016.i11 wdk2c Triticum aesti... 44 0.012
gb|CD453910.1|CD453910 WHE0903_F03_L05ZT CS wheat 5-15 DAP ... 44 0.012
gb|CD891181.1|CD891181 G118.116H07F010723 G118 Triticum aes... 44 0.012
gb|CD897450.1|CD897450 G174.105O19F010823 G174 Triticum aes... 44 0.012
gb|CD898564.1|CD898564 G174.109G12R011122 G174 Triticum aes... 44 0.012
gb|CD900718.1|CD900718 G356.101I14F010906 G356 Triticum aes... 44 0.012
gb|CD921054.1|CD921054 G608.119D24F010912 G608 Triticum aes... 44 0.012
gb|CN009761.1|CN009761 WHE3862_D09_H18ZS Wheat Fusarium gra... 44 0.012
gb|CV766823.1|CV766823 FGAS061210 Triticum aestivum FGAS: L... 44 0.012
gb|BJ316080.1|BJ316080 BJ316080 Y. Ogihara unpublished cDNA... 42 0.046
gb|CA645096.1|CA645096 wre1n.pk0087.d11 wre1n Triticum aest... 42 0.046
gb|CA653633.1|CA653633 wre1n.pk191.f4 wre1n Triticum aestiv... 42 0.046
gb|CD936048.1|CD936048 OV.103F18F010205 OV Triticum aestivu... 42 0.046
gb|BJ256596.1|BJ256596 BJ256596 Y. Ogihara unpublished cDNA... 40 0.18
gb|BJ293027.1|BJ293027 BJ293027 Y. Ogihara unpublished cDNA... 40 0.18
gb|BJ299413.1|BJ299413 BJ299413 Y. Ogihara unpublished cDNA... 40 0.18
gb|BQ789231.1|BQ789231 WHE4159_A11_A21ZS Wheat CS whole pla... 40 0.18
gb|CA620073.1|CA620073 wl1n.pk0052.h9 wl1n Triticum aestivu... 40 0.18
gb|CD454239.1|CD454239 WHE1759-1762_N16_N16ZT CS wheat pre-... 40 0.18
gb|CD885769.1|CD885769 G118.100G10F010423 G118 Triticum aes... 40 0.18
gb|CD885770.1|CD885770 G118.100G10R010921 G118 Triticum aes... 40 0.18
gb|CD904172.1|CD904172 G356.112K17F010919 G356 Triticum aes... 40 0.18
gb|CK152713.1|CK152713 FGAS035787 Triticum aestivum FGAS: T... 40 0.18
gb|CK152762.1|CK152762 FGAS035837 Triticum aestivum FGAS: T... 40 0.18
gb|CF569151.1|CF569151 EST012 Subtracted, Clontech (cat. # ... 40 0.18
>gb|BJ266003.1|BJ266003 BJ266003 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh24g14 3', mRNA sequence
Length = 599
Score = 454 bits (229), Expect = e-126
Identities = 303/328 (92%)
Strand = Plus / Minus
Query: 1 gggcggcgacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgct 60
||||| |||||||| | ||||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 527 gggcgccgacgacgagaacgacgagttcgccgacctctacatcgtcaagtggacgtcgct 468
Query: 61 gatgatcccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcag 120
||||||||||||||||| ||||||||||||||||| |||| |||||| ||||| |||||
Sbjct: 467 catgatcccgcccatcgtcatcatgatggtgaacctcatcgccatcgccgtcggcttcag 408
Query: 121 ccgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcag 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 407 ccgcaccatctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcag 348
Query: 181 cttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccg 240
||||||||||||||| |||||||||||||||||||||||||| ||||| || |||| ||
Sbjct: 347 cttctgggtgctggctcacctgtacccgttcgccaagggcctcatgggccgccggggacg 288
Query: 241 cacgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtg 300
||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||
Sbjct: 287 cacgccgaccatcgtcttcgtctggtccggcctcctcgccatcaccatctccctgctgtg 228
Query: 301 ggtggccatcaacccgccgtcccagaac 328
||| ||||||||||||||||| ||||||
Sbjct: 227 ggtcgccatcaacccgccgtcgcagaac 200
>gb|BJ321461.1|BJ321461 BJ321461 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf20p24 3', mRNA sequence
Length = 654
Score = 454 bits (229), Expect = e-126
Identities = 303/328 (92%)
Strand = Plus / Minus
Query: 1 gggcggcgacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgct 60
||||| |||||||| | ||||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 583 gggcgccgacgacgagaacgacgagttcgccgacctctacatcgtcaagtggacgtcgct 524
Query: 61 gatgatcccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcag 120
||||||||||||||||| ||||||||||||||||| |||| |||||| ||||| |||||
Sbjct: 523 catgatcccgcccatcgtcatcatgatggtgaacctcatcgccatcgccgtcggcttcag 464
Query: 121 ccgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcag 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 463 ccgcaccatctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcag 404
Query: 181 cttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccg 240
||||||||||||||| |||||||||||||||||||||||||| ||||| || |||| ||
Sbjct: 403 cttctgggtgctggctcacctgtacccgttcgccaagggcctcatgggccgccggggacg 344
Query: 241 cacgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtg 300
||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||
Sbjct: 343 cacgccgaccatcgtcttcgtctggtccggcctcctcgccatcaccatctccctgctgtg 284
Query: 301 ggtggccatcaacccgccgtcccagaac 328
||| ||||||||||||||||| ||||||
Sbjct: 283 ggtcgccatcaacccgccgtcgcagaac 256
>gb|BQ753218.1|BQ753218 WHE4124_D10_H20ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4124_D10_H20, mRNA sequence
Length = 675
Score = 454 bits (229), Expect = e-126
Identities = 303/328 (92%)
Strand = Plus / Plus
Query: 1 gggcggcgacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgct 60
||||| |||||||| | ||||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 152 gggcgccgacgacgagaacgacgagttcgccgacctctacatcgtcaagtggacgtcgct 211
Query: 61 gatgatcccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcag 120
||||||||||||||||| ||||||||||||||||| |||| |||||| ||||| |||||
Sbjct: 212 catgatcccgcccatcgtcatcatgatggtgaacctcatcgccatcgccgtcggcttcag 271
Query: 121 ccgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcag 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 272 ccgcaccatctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcag 331
Query: 181 cttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccg 240
||||||||||||||| |||||||||||||||||||||||||| ||||| || |||| ||
Sbjct: 332 cttctgggtgctggctcacctgtacccgttcgccaagggcctcatgggccgccggggacg 391
Query: 241 cacgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtg 300
||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||
Sbjct: 392 cacgccgaccatcgtcttcgtctggtccggcctcctcgccatcaccatctccctgctgtg 451
Query: 301 ggtggccatcaacccgccgtcccagaac 328
||| ||||||||||||||||| ||||||
Sbjct: 452 ggtcgccatcaacccgccgtcgcagaac 479
>emb|AX756302.1| Sequence 1041 from Patent WO03000905
Length = 1423
Score = 454 bits (229), Expect = e-126
Identities = 303/328 (92%)
Strand = Plus / Plus
Query: 1 gggcggcgacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgct 60
||||| |||||||| | ||||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 840 gggcgccgacgacgagaacgacgagttcgccgacctctacatcgtcaagtggacgtcgct 899
Query: 61 gatgatcccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcag 120
||||||||||||||||| ||||||||||||||||| |||| |||||| ||||| |||||
Sbjct: 900 catgatcccgcccatcgtcatcatgatggtgaacctcatcgccatcgccgtcggcttcag 959
Query: 121 ccgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 ccgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcag 1019
Query: 181 cttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccg 240
||||||||||||||| ||||| |||||||||||||||||||| ||||| || |||| ||
Sbjct: 1020 cttctgggtgctggctcacctctacccgttcgccaagggcctcatgggccgccggggacg 1079
Query: 241 cacgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtg 300
||||||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||
Sbjct: 1080 cacgccgaccatcgtcttcgtctggtccggcctcctcgccatcaccatttcgctgctgtg 1139
Query: 301 ggtggccatcaacccgccgtcccagaac 328
||| ||||||||||||||||| ||||||
Sbjct: 1140 ggtcgccatcaacccgccgtcgcagaac 1167
>gb|BJ254056.1|BJ254056 BJ254056 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4e03 3', mRNA sequence
Length = 550
Score = 448 bits (226), Expect = e-124
Identities = 302/328 (92%)
Strand = Plus / Minus
Query: 1 gggcggcgacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgct 60
||||| |||||||| | ||||||||||| | ||||| |||||||||||||| ||||||||
Sbjct: 486 gggcgccgacgacgagaacgacgagttcgccgacctctacatcgtcaagtgnacgtcgct 427
Query: 61 gatgatcccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcag 120
||||||||||||||||| ||||||||||||||||| |||| |||||| ||||| |||||
Sbjct: 426 catgatcccgcccatcgtcatcatgatggtgaacctcatcgccatcgccgtcggcttcag 367
Query: 121 ccgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcag 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 366 ccgcaccatctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcag 307
Query: 181 cttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccg 240
||||||||||||||| |||||||||||||||||||||||||| ||||| || |||| ||
Sbjct: 306 cttctgggtgctggctcacctgtacccgttcgccaagggcctcatgggccgccggggacg 247
Query: 241 cacgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtg 300
||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||
Sbjct: 246 cacgccgaccatcgtcttcgtctggtccggcctcctcgccatcaccatctccctgctgtg 187
Query: 301 ggtggccatcaacccgccgtcccagaac 328
||| ||||||||||||||||| ||||||
Sbjct: 186 ggtcgccatcaacccgccgtcgcagaac 159
>gb|BQ743340.1|BQ743340 WHE4102_H02_O04ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4102_H02_O04, mRNA sequence
Length = 622
Score = 448 bits (226), Expect = e-124
Identities = 297/321 (92%)
Strand = Plus / Plus
Query: 8 gacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgctgatgatc 67
||||||| | ||||||||| | | ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 178 gacgacgagaacgacgagtacgccgacctctacatcgtcaagtggacctcgctcatgatc 237
Query: 68 ccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcagccgcacc 127
||||||||||| ||||||||||| ||||| |||| |||||| ||||| ||||||||||||
Sbjct: 238 ccgcccatcgtcatcatgatggtcaacctcatcgccatcgccgtcggcttcagccgcacc 297
Query: 128 atctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgg 187
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 298 atctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcagcttctgg 357
Query: 188 gtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgcacgccg 247
|||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||
Sbjct: 358 gtgctggctcacctgtacccgttcgccaagggcctcatggggcgccgcggccgcacgccg 417
Query: 248 accatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgggtggcc 307
|||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||
Sbjct: 418 accatcgtcttcgtctggtccggcctcctcgccatcaccatctcgctgctgtgggtggcc 477
Query: 308 atcaacccgccgtcccagaac 328
|||||||||||||| ||||||
Sbjct: 478 atcaacccgccgtcgcagaac 498
>gb|CA598658.1|CA598658 wyr1c.pk002.h22 wyr1c Triticum aestivum cDNA clone wyr1c.pk002.h22
5' end, mRNA sequence
Length = 607
Score = 448 bits (226), Expect = e-124
Identities = 297/321 (92%)
Strand = Plus / Plus
Query: 8 gacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgctgatgatc 67
||||||| | ||||||||| | | ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 3 gacgacgagaacgacgagtacgccgacctctacatcgtcaagtggacctcgctcatgatc 62
Query: 68 ccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcagccgcacc 127
||||||||||| ||||||||||| ||||| |||| |||||| ||||| ||||||||||||
Sbjct: 63 ccgcccatcgtcatcatgatggtcaacctcatcgccatcgccgtcggcttcagccgcacc 122
Query: 128 atctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgg 187
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 123 atctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcagcttctgg 182
Query: 188 gtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgcacgccg 247
|||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||
Sbjct: 183 gtgctggctcacctgtacccgttcgccaagggcctcatggggcgccgcggccgcacgccg 242
Query: 248 accatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgggtggcc 307
|||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||
Sbjct: 243 accatcgtcttcgtctggtccggcctcctcgccatcaccatctcgctgctgtgggtggcc 302
Query: 308 atcaacccgccgtcccagaac 328
|||||||||||||| ||||||
Sbjct: 303 atcaacccgccgtcgcagaac 323
>gb|BG607364.1|BG607364 WHE2471_F12_K23ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2471_F12_K23,
mRNA sequence
Length = 533
Score = 440 bits (222), Expect = e-122
Identities = 296/321 (92%)
Strand = Plus / Plus
Query: 1 gggcggcgacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgct 60
||||| |||||||| | ||||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 211 gggcgccgacgacgagaacgacgagttcgccgacctctacatcgtcaagtggacgtcgct 270
Query: 61 gatgatcccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcag 120
||||||||||||||||| ||||||||||| ||||| |||| |||||| ||||| |||||
Sbjct: 271 catgatcccgcccatcgtcatcatgatggtcaacctcatcgccatcgccgtcggcttcag 330
Query: 121 ccgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcag 180
||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 331 ccgcaccatctacagcgagataccgcagtggagcaagctccttggcggcgtcttcttcag 390
Query: 181 cttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccg 240
||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 391 cttctgggtgctggctcacctctacccgttcgccaagggcctcatggggcgccggggccg 450
Query: 241 cacgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtg 300
||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||
Sbjct: 451 cacgccgaccatcgtcttcgtctggtccggcctcctcgccatcaccatctccctgctgtg 510
Query: 301 ggtggccatcaacccgccgtc 321
|||||||||||||||||||||
Sbjct: 511 ggtggccatcaacccgccgtc 531
>gb|CK195305.1|CK195305 FGAS003744 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 418 bits (211), Expect = e-115
Identities = 293/321 (91%)
Strand = Plus / Plus
Query: 8 gacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgctgatgatc 67
||||||| | ||||||||| | | ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 459 gacgacgagaacgacgagtacgccgacctctacatcgtcaagtggacctcgctcatgatc 518
Query: 68 ccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcagccgcacc 127
||||||||||| ||||||||||| ||||| |||| |||||| ||||| ||||||||||||
Sbjct: 519 ccgcccatcgtcatcatgatggtcaacctcatcgccatcgccgtcggcttcagccgcacc 578
Query: 128 atctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgg 187
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 579 atctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcagcttctgg 638
Query: 188 gtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgcacgccg 247
|||||||| |||||||||||||||||||||||||| |||||||| | || |||||||||
Sbjct: 639 gtgctggctcacctgtacccgttcgccaagggcctcatggggcgccgcggncgcacgccg 698
Query: 248 accatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgggtggcc 307
|||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| |||
Sbjct: 699 accatcgtcttcgtctggtccggcctcctcgccatcaccatctcgctgctgtgggttgcc 758
Query: 308 atcaacccgccgtcccagaac 328
||| | |||||||| ||||||
Sbjct: 759 atccaaccgccgtcgcagaac 779
>gb|CA652128.1|CA652128 wre1n.pk178.g12 wre1n Triticum aestivum cDNA clone wre1n.pk178.g12
5' end, mRNA sequence
Length = 494
Score = 375 bits (189), Expect = e-102
Identities = 234/249 (93%)
Strand = Plus / Plus
Query: 80 atcatgatggtgaacctgatcggcatcgcggtcgggttcagccgcaccatctacagcgag 139
||||||||||| ||||| |||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 5 atcatgatggtcaacctcatcgccatcgccgtcggcttcagccgcaccatctacagcgag 64
Query: 140 atcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgggtgctggcgcac 199
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 65 atcccgcagtggagcaagctcctgggcggcgtcttcttcagcttctgggtgctggctcac 124
Query: 200 ctgtacccgttcgccaagggcctgatggggcggaggggccgcacgccgaccatcgtcttc 259
||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 125 ctgtacccgttcgccaagggcctcatggggcgccgcggccgcacgccgaccatcgtcttc 184
Query: 260 gtctgggcgggcctcctctccatcaccatctcgctgctgtgggtggccatcaacccgccg 319
|||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gtctggtccggcctcctcgccatcaccatctcgctgctgtgggtggccatcaacccgccg 244
Query: 320 tcccagaac 328
|| ||||||
Sbjct: 245 tcgcagaac 253
>gb|CD929632.1|CD929632 GR45.108L13R010612 GR45 Triticum aestivum cDNA clone GR45108L13,
mRNA sequence
Length = 670
Score = 311 bits (157), Expect = 3e-083
Identities = 207/224 (92%)
Strand = Plus / Minus
Query: 8 gacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgctgatgatc 67
||||||| | ||||||||| | | ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 229 gacgacgagaacgacgagtacgccgacctctacatcgtcaagtggacctcgctcatgatc 170
Query: 68 ccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcagccgcacc 127
||||||||||| ||||||||||| ||||| |||| |||||| ||||| ||||||||||||
Sbjct: 169 ccgcccatcgtcatcatgatggtcaacctcatcgccatcgccgtcggcttcagccgcacc 110
Query: 128 atctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgg 187
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 109 atctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcagcttctgg 50
Query: 188 gtgctggcgcacctgtacccgttcgccaagggcctgatggggcg 231
|||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 49 gtgctggctcacctgtacccgttcgccaagggcctcatggggcg 6
>gb|CV066003.1|CV066003 WNEL29d6 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL29d6 5' similar to Oryza sativa, mRNA sequence
Length = 464
Score = 307 bits (155), Expect = 5e-082
Identities = 194/207 (93%)
Strand = Plus / Plus
Query: 122 cgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagc 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 cgcaccatctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcagc 60
Query: 182 ttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgc 241
|||||||||||||| |||||||||||||||||||||||||| ||||| || |||| |||
Sbjct: 61 ttctgggtgctggctcacctgtacccgttcgccaagggcctcatgggccgccggggacgc 120
Query: 242 acgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgg 301
|||||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||
Sbjct: 121 acgccgaccatcgtcttcgtctggtccggcctcctcgccatcaccatctccctgctgtgg 180
Query: 302 gtggccatcaacccgccgtcccagaac 328
|| ||||||||||||||||| ||||||
Sbjct: 181 gtcgccatcaacccgccgtcgcagaac 207
>gb|CD938838.1|CD938838 OV.111D10R010412 OV Triticum aestivum cDNA clone OV111D10, mRNA
sequence
Length = 608
Score = 297 bits (150), Expect = 5e-079
Identities = 205/224 (91%)
Strand = Plus / Minus
Query: 8 gacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgctgatgatc 67
||||||| | ||||||||| | | ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 226 gacgacgagaacgacgagtacgccgacctctacatcgtcaagtggacctcgctcatgatc 167
Query: 68 ccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcagccgcacc 127
||||||||||| ||||||||||| ||||| |||| |||||| ||||| ||||||||||||
Sbjct: 166 ccgcccatcgtcatcatgatggtcaacctcatcgccatcgccgtcggcttcagccgcacc 107
Query: 128 atctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgg 187
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 106 atctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcagcttctgg 47
Query: 188 gtgctggcgcacctgtacccgttcgccaagggcctgatggggcg 231
|||||||| ||||||||||||||||| ||||||| ||||||||
Sbjct: 46 gtgctggctcacctgtacccgttcgcncagggcctcatggggcg 3
>gb|CD929631.1|CD929631 GR45.108L13F010413 GR45 Triticum aestivum cDNA clone GR45108L13,
mRNA sequence
Length = 744
Score = 289 bits (146), Expect = 1e-076
Identities = 193/209 (92%)
Strand = Plus / Plus
Query: 8 gacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgctgatgatc 67
||||||| | ||||||||| | | ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 536 gacgacgagaacgacgagtacgccgacctctacatcgtcaagtggacctcgctcatgatc 595
Query: 68 ccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcagccgcacc 127
||||||||||| ||||||||||| ||||| |||| |||||| ||||| ||||||||||||
Sbjct: 596 ccgcccatcgtcatcatgatggtcaacctcatcgccatcgccgtcggcttcagccgcacc 655
Query: 128 atctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgg 187
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 656 atctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcagcttctgg 715
Query: 188 gtgctggcgcacctgtacccgttcgccaa 216
|||||||| ||||||||||||||||||||
Sbjct: 716 gtgctggctcacctgtacccgttcgccaa 744
>gb|BQ237973.1|BQ237973 TaE05009H10F TaE05 Triticum aestivum cDNA clone TaE05009H10F, mRNA
sequence
Length = 612
Score = 280 bits (141), Expect = 1e-073
Identities = 203/224 (90%)
Strand = Plus / Minus
Query: 8 gacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgctgatgatc 67
||||||| | ||||||||| | | ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 226 gacgacgagaacgacgagtacgccgacctctacatcgtcaagtggacctcgctcatgatc 167
Query: 68 ccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcagccgcacc 127
||||||||||| ||||||||||| ||||| |||| |||||| ||||| ||||||||| ||
Sbjct: 166 ccgcccatcgtcatcatgatggtcaacctcatcgccatcgccgtcggcttcagccgcgcc 107
Query: 128 atctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgg 187
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 106 atgtacagcgagatcccgcagtggagcaagctcctgggcggcgtcttcttcagcttctgg 47
Query: 188 gtgctggcgcacctgtacccgttcgccaagggcctgatggggcg 231
|||||||| |||||| |||||||||||||||||| ||||||||
Sbjct: 46 gtgctggctcacctgcccccgttcgccaagggcctcatggggcg 3
>gb|BG608401.1|BG608401 WHE2498_H08_P16ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2498_H08_P16,
mRNA sequence
Length = 448
Score = 250 bits (126), Expect = 1e-064
Identities = 162/174 (93%)
Strand = Plus / Plus
Query: 155 aagctgctgggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgcc 214
||||| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1 aagctccttggcggcgtcttcttcagcttctgggtgctggctcacctctacccgttcgcc 60
Query: 215 aagggcctgatggggcggaggggccgcacgccgaccatcgtcttcgtctgggcgggcctc 274
|||||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||
Sbjct: 61 aagggcctcatggggcgccggggccgcacgccgaccatcgtcttcgtctggtccggcctc 120
Query: 275 ctctccatcaccatctcgctgctgtgggtggccatcaacccgccgtcccagaac 328
||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 121 ctcgccatcaccatctccctgctgtgggtggccatcaacccgccgtcgcagaac 174
>gb|CK194966.1|CK194966 FGAS003400 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 842
Score = 240 bits (121), Expect = 1e-061
Identities = 151/161 (93%)
Strand = Plus / Minus
Query: 56 tcgctgatgatcccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcggg 115
||||| ||||||||||||||||| ||||||||||| ||||| |||| |||||| |||||
Sbjct: 687 tcgctcatgatcccgcccatcgtcatcatgatggtcaacctcatcgccatcgccgtcggc 628
Query: 116 ttcagccgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttc 175
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 627 ttcagccgcaccatctacagcgagatcccgcagtggagcaagctcctgggcggcgtcttc 568
Query: 176 ttcagcttctgggtgctggcgcacctgtacccgttcgccaa 216
|||||||||||||||||| | ||||||||||||||||||||
Sbjct: 567 ttcagcttctgggtgctgactcacctgtacccgttcgccaa 527
Score = 60.0 bits (30), Expect = 2e-007
Identities = 47/50 (94%), Gaps = 2/50 (4%)
Strand = Plus / Minus
Query: 279 ccatcaccatctcgctgctgtgggtggccatcaacccgccgtcccagaac 328
|||||||||||| |||||||||| ||||||||||||||||||| ||||||
Sbjct: 458 ccatcaccatct-gctgctgtgg-tggccatcaacccgccgtcgcagaac 411
>gb|CD931463.1|CD931463 GR45.114J03R010613 GR45 Triticum aestivum cDNA clone GR45114J03,
mRNA sequence
Length = 506
Score = 115 bits (58), Expect = 4e-024
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 131 tacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgggtg 190
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 102 tacagcgagttcccgcagtggagcaagctgctgggcggcgccttcttcagcttctgggtg 43
Query: 191 ctggcgcacctgtacccgttcgccaagggc 220
||| ||||| ||||| ||||||| ||||
Sbjct: 42 ctgtgccacctctaccccttcgccaggggc 13
>gb|BQ237630.1|BQ237630 TaE05014D01F TaE05 Triticum aestivum cDNA clone TaE05014D01F, mRNA
sequence
Length = 488
Score = 113 bits (57), Expect = 2e-023
Identities = 90/101 (89%)
Strand = Plus / Minus
Query: 131 tacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgggtg 190
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 103 tacagcgagttcccgcagtggagcaagctgctgggcggcgccttcttcagcttctgggtg 44
Query: 191 ctggcgcacctgtacccgttcgccaagggcctgatggggcg 231
||| ||||| ||| ||||||||||| || ||||||||
Sbjct: 43 ctgtgccacctcccccccttcgccaaggggctcatggggcg 3
>gb|CF133837.1|CF133837 WHE4364_C04_E08ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4364_C04_E08, mRNA sequence
Length = 613
Score = 113 bits (57), Expect = 2e-023
Identities = 81/89 (91%)
Strand = Plus / Plus
Query: 131 tacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgggtg 190
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 511 tacagcgagttcccgcagtggagcaagctgctgggcggcgccttcttcagcttctgggtg 570
Query: 191 ctggcgcacctgtacccgttcgccaaggg 219
||| ||||| ||| | |||||||||||
Sbjct: 571 ctgtgccacctctactccttcgccaaggg 599
>gb|BQ166626.1|BQ166626 WHE0906_G11_M22ZT Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0906_G11_M22, mRNA sequence
Length = 339
Score = 103 bits (52), Expect = 1e-020
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 269 ggcctcctctccatcaccatctcgctgctgtgggtggccatcaacccgccgtcccagaac 328
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 335 ggcctcctcgccatcaccatctcgctgctgtgggtggccatcaacccgccgtcgcagaac 276
>gb|BJ318706.1|BJ318706 BJ318706 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf12p04 3', mRNA sequence
Length = 480
Score = 73.8 bits (37), Expect = 1e-011
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 166 cggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaagggcctgat 225
||||| |||||||||||||||||||||| ||||| ||||| ||||||||||| || |
Sbjct: 338 cggcgccttcttcagcttctgggtgctgtgccacctctaccccttcgccaaggggctcct 279
Query: 226 ggggcggaggggccgcacgccgaccatcgtcttcgtctgg 265
||| || | | |||| ||||||||||||||||||||||
Sbjct: 278 gggacgccgcgnccgcgtgccgaccatcgtcttcgtctgg 239
>gb|BJ265369.1|BJ265369 BJ265369 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21l06 3', mRNA sequence
Length = 656
Score = 65.9 bits (33), Expect = 3e-009
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 164 ggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaagggc 220
||||| |||||||||| ||||||||||||| ||||| ||||||||||||||||||
Sbjct: 639 ggcggggtcttcttcaacttctgggtgctgttccacctctacccgttcgccaagggc 583
>gb|BJ277759.1|BJ277759 BJ277759 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr12p06 5', mRNA sequence
Length = 634
Score = 65.9 bits (33), Expect = 3e-009
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 164 ggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaagggc 220
||||| |||||||||| ||||||||||||| ||||| ||||||||||||||||||
Sbjct: 400 ggcggggtcttcttcaacttctgggtgctgttccacctctacccgttcgccaagggc 456
>gb|BJ321571.1|BJ321571 BJ321571 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf21h08 3', mRNA sequence
Length = 646
Score = 65.9 bits (33), Expect = 3e-009
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 164 ggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaagggc 220
|||||||||||||||| |||||||||||| ||||| ||||||||||||||||||
Sbjct: 600 ggcggcgtcttcttcaacttctgggtgctcttccacctctacccgttcgccaagggc 544
>gb|CA709780.1|CA709780 wdk2c.pk013.l9 wdk2c Triticum aestivum cDNA clone wdk2c.pk013.l9 5'
end, mRNA sequence
Length = 457
Score = 65.9 bits (33), Expect = 3e-009
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 164 ggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaagggc 220
||||| |||||||||| ||||||||||||| ||||| ||||||||||||||||||
Sbjct: 45 ggcggggtcttcttcaacttctgggtgctgttccacctctacccgttcgccaagggc 101
>gb|BJ219357.1|BJ219357 BJ219357 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh33o21 3', mRNA sequence
Length = 682
Score = 63.9 bits (32), Expect = 1e-008
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 164 ggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaaggg 219
||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 632 ggcggggtcttcttcaacttctgggtgctgttccacctctacccgttcgccaaggg 577
>gb|BQ578610.1|BQ578610 WHE0307_E11_J21ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0307_E11_J21, mRNA
sequence
Length = 711
Score = 63.9 bits (32), Expect = 1e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 164 ggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaaggg 219
||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 473 ggcggggtcttcttcaacttctgggtgctgttccacctctacccgttcgccaaggg 528
>gb|CA601278.1|CA601278 wl1.pk0011.e7 wl1 Triticum aestivum cDNA clone wl1.pk0011.e7 5'
end, mRNA sequence
Length = 533
Score = 63.9 bits (32), Expect = 1e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 164 ggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaaggg 219
||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 51 ggcggggtcttcttcaacttctgggtgctgttccacctctacccgttcgccaaggg 106
>gb|CA618417.1|CA618417 wl1n.pk0033.e7 wl1n Triticum aestivum cDNA clone wl1n.pk0033.e7 5'
end, mRNA sequence
Length = 582
Score = 63.9 bits (32), Expect = 1e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 164 ggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaaggg 219
||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 283 ggcggggtcttcttcaacttctgggtgctgttccacctctacccgttcgccaaggg 338
>gb|CD939844.1|CD939844 OV.115H07F010313 OV Triticum aestivum cDNA clone OV115H07, mRNA
sequence
Length = 500
Score = 63.9 bits (32), Expect = 1e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 164 ggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaaggg 219
||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 236 ggcggggtcttcttcaacttctgggtgctgttccacctctacccgttcgccaaggg 291
>gb|CK214519.1|CK214519 FGAS026446 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1139
Score = 63.9 bits (32), Expect = 1e-008
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 164 ggcggcgtcttcttcagcttctgggtgctggcgcacctgtacccgttcgccaaggg 219
||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 561 ggcggggtcttcttcaacttctgggtgctgttccacctctacccgttcgccaaggg 506
>gb|CD881364.1|CD881364 F1.102P11F010328 F1 Triticum aestivum cDNA clone F1102P11, mRNA
sequence
Length = 703
Score = 58.0 bits (29), Expect = 8e-007
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 80 atcatgatggtgaacctgatcggcatcgcggtcgggttcagccgcaccatctacagcgag 139
||||| ||||||||||| | | ||| || || || ||||||||||| || ||||||
Sbjct: 292 atcatcatggtgaaccttgttgccattgctgttggcttcagccgcacaatttacagcaca 351
Query: 140 atcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgggtgct 192
|||||||| ||||||||||| || || || || || |||||||||||||||||
Sbjct: 352 atcccgcaatggagcaagcttcttggtggagtgtttttcagcttctgggtgct 404
>gb|BQ902843.1|BQ902843 Ta03_02c11_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_02c11, mRNA
sequence
Length = 866
Score = 52.0 bits (26), Expect = 5e-005
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 164 ggcggcgt-cttcttcagcttctgggtgctggcgcacctgtacccgttcgccaagggc 220
|||||||| |||||||| |||||||||||| ||||| ||||||||||||||||||
Sbjct: 224 ggcggcgtgcttcttcaacttctgggtgctcttccacctctacccgttcgccaagggc 167
>gb|BJ276952.1|BJ276952 BJ276952 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh27e05 3', mRNA sequence
Length = 634
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 172 cttcttcagcttctgggtgctggcgcacctgtacccgttcgccaagggc 220
|||||||| |||||||||||| ||||| ||||||||||||||||||
Sbjct: 634 cttcttcaacttctgggtgctcttccacctctacccgttcgccaagggc 586
>gb|BE470727.1|BE470727 WHE0279_F10_K19ZS Wheat drought-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0279_F10_K19, mRNA
sequence
Length = 557
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 372 ccgcacgccgaccatcgtcatcgtctgg 399
>gb|BG606306.1|BG606306 WHE2959_C09_E17ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2959_C09_E17, mRNA sequence
Length = 402
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 218 ccgcacgccgaccatcgtcatcgtctgg 245
>gb|BI751378.1|BI751378 Ta01_16h11_R
Ta01_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta01_16h11, mRNA
sequence
Length = 697
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 311 ccgcacgccgaccatcgtcatcgtctgg 284
>gb|BQ483336.1|BQ483336 WHE3507_D04_H07ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3507_D04_H07, mRNA sequence
Length = 580
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 266 ccgcacgccgaccatcgtcatcgtctgg 293
>gb|AL828184.1|AL828184 AL828184 p:436 Triticum aestivum cDNA clone B03_p436_plate_12, mRNA
sequence
Length = 621
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 465 ccgcacgccgaccatcgtcatcgtctgg 492
>gb|AL829321.1|AL829321 AL829321 q:141 Triticum aestivum cDNA clone C07_q141_plate_7, mRNA
sequence
Length = 571
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 507 ccgcacgccgaccatcgtcatcgtctgg 534
>gb|CA501152.1|CA501152 WHE4029_H06_O11ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4029_H06_O11, mRNA sequence
Length = 480
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 24 ccgcacgccgaccatcgtcatcgtctgg 51
>gb|CA502290.1|CA502290 WHE4045_E03_I05ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4045_E03_I05, mRNA sequence
Length = 649
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 414 ccgcacgccgaccatcgtcatcgtctgg 441
>gb|CA607764.1|CA607764 wr1.pk0082.h9 wr1 Triticum aestivum cDNA clone wr1.pk0082.h9 5'
end, mRNA sequence
Length = 500
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 2 ccgcacgccgaccatcgtcatcgtctgg 29
>gb|CA710708.1|CA710708 wdk2c.pk016.n20 wdk2c Triticum aestivum cDNA clone wdk2c.pk016.n20
5' end, mRNA sequence
Length = 434
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 13 ccgcacgccgaccatcgtcatcgtctgg 40
>gb|CD887966.1|CD887966 G118.106L09R010925 G118 Triticum aestivum cDNA clone G118106L09,
mRNA sequence
Length = 606
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 443 ccgcacgccgaccatcgtcatcgtctgg 416
>gb|CK164582.1|CK164582 FGAS048496 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 906
Score = 48.1 bits (24), Expect = 7e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 238 ccgcacgccgaccatcgtcttcgtctgg 265
||||||||||||||||||| ||||||||
Sbjct: 232 ccgcacgccgaccatcgtcatcgtctgg 205
>gb|BJ319137.1|BJ319137 BJ319137 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf5c05 3', mRNA sequence
Length = 738
Score = 44.1 bits (22), Expect = 0.012
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 238 ccgcacgccgaccatcgtcttcgtctgggc 267
|||||||||||||||||| ||||||||||
Sbjct: 206 ccgcacgccgaccatcgttgtcgtctgggc 177
>gb|CA606671.1|CA606671 wr1.pk0070.a10 wr1 Triticum aestivum cDNA clone wr1.pk0070.a10 5'
end, mRNA sequence
Length = 634
Score = 44.1 bits (22), Expect = 0.012
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 164 ggcggcgtcttcttcagcttctgggtgctg 193
||||| |||||||||| |||||||||||||
Sbjct: 276 ggcggggtcttcttcaacttctgggtgctg 305
>gb|CA651158.1|CA651158 wre1n.pk175.e6 wre1n Triticum aestivum cDNA clone wre1n.pk175.e6 5'
end, mRNA sequence
Length = 489
Score = 44.1 bits (22), Expect = 0.012
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 164 ggcggcgtcttcttcagcttctgggtgctg 193
||||| |||||||||| |||||||||||||
Sbjct: 239 ggcggggtcttcttcaacttctgggtgctg 268
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 161,033
Number of Sequences: 636343
Number of extensions: 161033
Number of successful extensions: 43858
Number of sequences better than 0.5: 75
Number of HSP's better than 0.5 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43767
Number of HSP's gapped (non-prelim): 86
length of query: 635
length of database: 367,240,239
effective HSP length: 19
effective length of query: 616
effective length of database: 355,149,722
effective search space: 218772228752
effective search space used: 218772228752
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)