BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2485885.2.1
(1063 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ753201.1|BQ753201 WHE4124_C05_F10ZS Wheat salt-stresse... 137 2e-030
gb|CD896624.1|CD896624 G174.103H05F010822 G174 Triticum aes... 82 9e-014
gb|BQ166861.1|BQ166861 WHE0938_F01_K02ZT Wheat 5-15 DAP spi... 80 4e-013
gb|BQ578506.1|BQ578506 WHE0304_F06_L12ZS Wheat unstressed s... 76 6e-012
gb|BG905028.1|BG905028 TaLr1136F06R TaLr1 Triticum aestivum... 70 3e-010
gb|BE425377.1|BE425377 WHE313_G03_G03ZS Wheat unstressed se... 68 1e-009
gb|AL827736.1|AL827736 AL827736 p:638 Triticum aestivum cDN... 64 2e-008
gb|AL827737.1|AL827737 AL827737 p:638 Triticum aestivum cDN... 64 2e-008
gb|BG905373.1|BG905373 TaLr1139C08F TaLr1 Triticum aestivum... 62 8e-008
gb|CK209010.1|CK209010 FGAS020743 Triticum aestivum FGAS: L... 58 1e-006
gb|BE445865.1|BE445865 WHE1147_G06_N11ZS Wheat etiolated se... 56 5e-006
gb|CA679716.1|CA679716 wlm4.pk0024.a2 wlm4 Triticum aestivu... 56 5e-006
gb|CA733540.1|CA733540 wlp1c.pk008.f19 wlp1c Triticum aesti... 52 8e-005
gb|BJ281318.1|BJ281318 BJ281318 Y. Ogihara unpublished cDNA... 50 3e-004
gb|BJ286382.1|BJ286382 BJ286382 Y. Ogihara unpublished cDNA... 50 3e-004
gb|BU100894.1|BU100894 WHE3359_B07_C13ZS Chinese Spring alu... 48 0.001
gb|CA712533.1|CA712533 wdk3c.pk006.o10 wdk3c Triticum aesti... 48 0.001
gb|CD871872.1|CD871872 AZO2.119E06F010207 AZO2 Triticum aes... 46 0.005
gb|CK216261.1|CK216261 FGAS028248 Triticum aestivum FGAS: L... 46 0.005
gb|BQ806639.1|BQ806639 WHE3581_D09_H17ZS Wheat developing g... 44 0.020
gb|CA620385.1|CA620385 wl1n.pk0055.d12 wl1n Triticum aestiv... 44 0.020
emb|AJ438333.1|TAE438333 Triticum aestivum partial mRNA for... 44 0.020
emb|AJ438335.1|TAE438335 Triticum aestivum partial mRNA for... 44 0.020
gb|BG905834.1|BG905834 TaLr1142G10F TaLr1 Triticum aestivum... 42 0.077
gb|AL828739.1|AL828739 AL828739 p:739 Triticum aestivum cDN... 42 0.077
gb|CA638832.1|CA638832 wre1n.pk0016.h9 wre1n Triticum aesti... 42 0.077
gb|CD895871.1|CD895871 G174.101C21F010821 G174 Triticum aes... 42 0.077
gb|CD918696.1|CD918696 G608.110I07F010910 G608 Triticum aes... 42 0.077
gb|CV773219.1|CV773219 FGAS067615 Triticum aestivum FGAS: L... 42 0.077
gb|CA612266.1|CA612266 wr1.pk0139.e8 wr1 Triticum aestivum ... 40 0.31
gb|CD881956.1|CD881956 F1.104N12F010330 F1 Triticum aestivu... 40 0.31
gb|CD922722.1|CD922722 G750.104K20F010529 G750 Triticum aes... 40 0.31
gb|CK211682.1|CK211682 FGAS023536 Triticum aestivum FGAS: L... 40 0.31
gb|CN012928.1|CN012928 WHE3954_F06_L12ZS Wheat Fusarium gra... 40 0.31
gb|CV760335.1|CV760335 FGAS054719 Triticum aestivum FGAS: L... 40 0.31
>gb|BQ753201.1|BQ753201 WHE4124_C05_F10ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4124_C05_F10, mRNA sequence
Length = 666
Score = 137 bits (69), Expect = 2e-030
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| || || ||| | |||||||| || ||||| |||||| | ||
Sbjct: 167 ggcgccgcagaaggagatcctggcgcacccggccgtgggggggttcgtgacgcacggcgg 226
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||| | || |||| ||| ||||||||
Sbjct: 227 gtggaactcggtgctggagagcctgtggcacggcatacccatggcgccgtggccgctgta 286
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| || ||||||||||||||||||||| ||||
Sbjct: 287 cgcggagcagcacctgaacgcgttcgagctcgttgccgacatgggcgtcgccgtgccgct 346
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||| ||||| ||||| || | || |||||||||||| | ||||||||||| |||||
Sbjct: 347 gaaggtggaccggaagcgggacaacttcgtggaggcggcggagctggagcgggcggt 403
>gb|CD896624.1|CD896624 G174.103H05F010822 G174 Triticum aestivum cDNA clone G174103H05,
mRNA sequence
Length = 636
Score = 81.8 bits (41), Expect = 9e-014
Identities = 128/157 (81%)
Strand = Plus / Plus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| || |||||||| ||||| ||| |||||||||| ||||||||| |||
Sbjct: 374 agcagccgcacgaatgcgtgcggtggctggacgtgcagcctccggcgtccgtggtgctcc 433
Query: 155 tatgcttcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcc 214
| || || ||||| || | |||||||||||| || ||||||||||| || ||||| |
Sbjct: 434 tctgttttggcagtatggggttcttcacggcgcctcaggcgcacgagatggcccacgggc 493
Query: 215 tggaccgcagcgggcatcgattcctgtgggtgctgcg 251
|||| ||||||||||| || ||||||||||| |||||
Sbjct: 494 tggagcgcagcgggcaccgcttcctgtgggttctgcg 530
Score = 50.1 bits (25), Expect = 3e-004
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 280 ccctcggacgggaacctcgcggagctgcttccggcggatttcttggcgaggacgaaggat 339
|||||||||| |||||||| ||||||||| |||| || || | ||| ||||||||||||
Sbjct: 559 ccctcggacgcgaacctcggggagctgctcccggagggtt-cgtggagaggacgaaggag 617
Query: 340 agagggctcgtgtggcc 356
| ||||| ||||||||
Sbjct: 618 aaggggctggtgtggcc 634
>gb|BQ166861.1|BQ166861 WHE0938_F01_K02ZT Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0938_F01_K02, mRNA sequence
Length = 406
Score = 79.8 bits (40), Expect = 4e-013
Identities = 94/112 (83%)
Strand = Plus / Minus
Query: 488 agcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacg 547
||||||| | |||||| |||||| |||| |||||||||||| |||||| ||||||| |
Sbjct: 406 agcagcatttcaacgccttcacgttggtctgcgacatgggcgtggccgtgccgctgaagg 347
Query: 548 tggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|||| ||||| || | || |||||||||||| | |||||||||||||||||
Sbjct: 346 tggacaggaaacgggacaacttcgtggaggcggcggagctggagcgagcggt 295
>gb|BQ578506.1|BQ578506 WHE0304_F06_L12ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0304_F06_L12, mRNA
sequence
Length = 644
Score = 75.8 bits (38), Expect = 6e-012
Identities = 170/214 (79%)
Strand = Plus / Plus
Query: 366 gccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctg 425
|||||||||||| || || || ||| | |||||||| || ||||| |||||| || ||
Sbjct: 60 gccgcagaaggacatcctggcgcacccggccgtgggggggttcgtgacgcacgccgggtg 119
Query: 426 gaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttggcgc 485
||||||||| || |||||||| ||||| ||| |||| |||| ||| ||||| || |||
Sbjct: 120 gaactcggtgctggagagcctgtggcacggcctgccaatggcgccgtggcctctctacgc 179
Query: 486 cgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaa 545
||||||||| ||||| ||| ||| || ||||||||||| ||||||||| |||| ||
Sbjct: 180 ggagcagcacctgaacgccttcgagctcgtcgccgacatgggggtcgccgtgccgctcaa 239
Query: 546 cgtggaaaggaagaggaagaatttcgtggaggcg 579
||||| ||||| || | || ||||||||||||
Sbjct: 240 ggtggaccggaagcgggacaacttcgtggaggcg 273
>gb|BG905028.1|BG905028 TaLr1136F06R TaLr1 Triticum aestivum cDNA clone TaLr1136F06 5',
mRNA sequence
Length = 510
Score = 69.9 bits (35), Expect = 3e-010
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||| ||| || ||||||||||||||||||||| ||||||| ||||| |||||
Sbjct: 491 aacgcgttcgagctcgttgccgacatgggcgtcgccgtgccgctgaaggtggaccggaag 432
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggtta 601
|| | || |||||| || || | ||||||||||| |||||||
Sbjct: 431 cgggacaacttcgtgtagtcggcggagctggagcgggcggtta 389
>gb|BE425377.1|BE425377 WHE313_G03_G03ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE313_G03_G03, mRNA
sequence
Length = 572
Score = 67.9 bits (34), Expect = 1e-009
Identities = 148/186 (79%)
Strand = Plus / Plus
Query: 394 gccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcat 453
|||||||| || ||||| |||||| || ||||||||||| || |||||||| |||||
Sbjct: 15 gccgtgggggggttcgtgacgcacgccgggtggaactcggtgctggagagcctgtggcac 74
Query: 454 ggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctg 513
||| |||| |||| ||| ||||| || ||| ||||||||| ||||| ||| |||
Sbjct: 75 ggcctgccaatggcgccgtggcctctctacgcggagcagcacctgaacgccttcgagctc 134
Query: 514 gtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaagaggaagaatttcgtg 573
|| ||||||||||| ||||||||| |||| || ||||| ||||| || | || ||||||
Sbjct: 135 gtcgccgacatgggggtcgccgtgccgctcaaggtggaccggaagcgggacaacttcgtg 194
Query: 574 gaggcg 579
||||||
Sbjct: 195 gaggcg 200
>gb|AL827736.1|AL827736 AL827736 p:638 Triticum aestivum cDNA clone E08_p638_plate_15, mRNA
sequence
Length = 495
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 395 ccgtgggaggcttcgtcacgcactgtggctggaactcggt 434
||||||| || |||||||||||||||||||||||||||||
Sbjct: 145 ccgtgggggggttcgtcacgcactgtggctggaactcggt 184
>gb|AL827737.1|AL827737 AL827737 p:638 Triticum aestivum cDNA clone E09_p638_plate_15, mRNA
sequence
Length = 514
Score = 63.9 bits (32), Expect = 2e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 395 ccgtgggaggcttcgtcacgcactgtggctggaactcggt 434
||||||| || |||||||||||||||||||||||||||||
Sbjct: 145 ccgtgggggggttcgtcacgcactgtggctggaactcggt 184
>gb|BG905373.1|BG905373 TaLr1139C08F TaLr1 Triticum aestivum cDNA clone TaLr1139C08 3',
mRNA sequence
Length = 625
Score = 61.9 bits (31), Expect = 8e-008
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 382 ctcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgag 441
|||||||||||||| | | |||||| |||||||||| ||||||||||| |||||||||
Sbjct: 505 ctcgcccacgccgcgctcgccggcttcctcacgcactgcggctggaactccgtcctcgag 446
Query: 442 agc 444
|||
Sbjct: 445 agc 443
>gb|CK209010.1|CK209010 FGAS020743 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1167
Score = 58.0 bits (29), Expect = 1e-006
Identities = 86/105 (81%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||| |||| | ||||| |||| ||| |||||||||| | |||||||||
Sbjct: 218 ggcgccgcagacggaggtgctcgctcacgaggccacgggaggcttcttggtgcactgtgg 159
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggt 467
|||||||||||||| |||||||| ||| |||||||| |||||
Sbjct: 158 gtggaactcggtcctggagagcctggtgcacggcgtgcccatggt 114
>gb|BE445865.1|BE445865 WHE1147_G06_N11ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1147_G06_N11,
mRNA sequence
Length = 239
Score = 56.0 bits (28), Expect = 5e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 568 ttcgtggaggcgaccgagctggagcgagcggt 599
|||||||||||| |||||||||||||||||||
Sbjct: 4 ttcgtggaggcggccgagctggagcgagcggt 35
>gb|CA679716.1|CA679716 wlm4.pk0024.a2 wlm4 Triticum aestivum cDNA clone wlm4.pk0024.a2 5'
end, mRNA sequence
Length = 580
Score = 56.0 bits (28), Expect = 5e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 387 ccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggt 434
|||||||||| |||| || ||||| |||||||| ||||||||||||||
Sbjct: 115 ccacgccgccctgggcgggttcgtgacgcactgcggctggaactcggt 162
>gb|CA733540.1|CA733540 wlp1c.pk008.f19 wlp1c Triticum aestivum cDNA clone wlp1c.pk008.f19
5' end, mRNA sequence
Length = 418
Score = 52.0 bits (26), Expect = 8e-005
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 414 gcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccgatggt 467
||||||||| |||||||||||||| |||||||| ||| |||||||| |||||
Sbjct: 50 gcactgtgggtggaactcggtcctggagagcctggtgcacggcgtgcccatggt 103
>gb|BJ281318.1|BJ281318 BJ281318 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21h16 5', mRNA sequence
Length = 693
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 406 ttcgtcacgcactgtggctggaactcggt 434
||||||||||||||||| |||||||||||
Sbjct: 156 ttcgtcacgcactgtggatggaactcggt 184
>gb|BJ286382.1|BJ286382 BJ286382 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21h16 3', mRNA sequence
Length = 616
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 406 ttcgtcacgcactgtggctggaactcggt 434
||||||||||||||||| |||||||||||
Sbjct: 486 ttcgtcacgcactgtggatggaactcggt 458
>gb|BU100894.1|BU100894 WHE3359_B07_C13ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3359_B07_C13,
mRNA sequence
Length = 575
Score = 48.1 bits (24), Expect = 0.001
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 414 gcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatg 473
|||||| || |||||||||||||| |||||||| ||| |||||||| ||||| | ||
Sbjct: 166 gcactgcgggtggaactcggtcctggagagcctggtgcacggcgtgcccatggtcgcgtg 225
Query: 474 gccgcttggcgccgagcagc 493
|||||| |||||||||||
Sbjct: 226 gccgctcttcgccgagcagc 245
>gb|CA712533.1|CA712533 wdk3c.pk006.o10 wdk3c Triticum aestivum cDNA clone wdk3c.pk006.o10
5' end, mRNA sequence
Length = 264
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 424 tggaactcggtcctcgagagcctctggcatggcgtgccgatggt 467
||||||||||||||||||||||| ||| |||||||| |||||
Sbjct: 109 tggaactcggtcctcgagagcctggtgcacggcgtgcccatggt 152
>gb|CD871872.1|CD871872 AZO2.119E06F010207 AZO2 Triticum aestivum cDNA clone AZO2119E06,
mRNA sequence
Length = 591
Score = 46.1 bits (23), Expect = 0.005
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 388 cacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggt 434
|||| ||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 54 cacggcgcggtgggcgggttcgtgacgcactgcggctggaactcggt 100
>gb|CK216261.1|CK216261 FGAS028248 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1093
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 397 gtgggaggcttcgtcacgcactgtggctggaactc 431
||||| |||||| | ||||||||||||||||||||
Sbjct: 499 gtgggcggcttcttgacgcactgtggctggaactc 465
>gb|BQ806639.1|BQ806639 WHE3581_D09_H17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3581_D09_H17, mRNA sequence
Length = 552
Score = 44.1 bits (22), Expect = 0.020
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 414 gcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccgatggt 467
|||||| || ||||||||||| || |||||||| ||| ||||||||||||||
Sbjct: 129 gcactgcgggtggaactcggtgctggagagcctggtgcacggcgtgccgatggt 182
>gb|CA620385.1|CA620385 wl1n.pk0055.d12 wl1n Triticum aestivum cDNA clone wl1n.pk0055.d12
5' end, mRNA sequence
Length = 620
Score = 44.1 bits (22), Expect = 0.020
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 406 ttcgtcacgcactgtggctggaactc 431
|||||||||||||| |||||||||||
Sbjct: 188 ttcgtcacgcactgcggctggaactc 213
>emb|AJ438333.1|TAE438333 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt4i13b
Length = 583
Score = 44.1 bits (22), Expect = 0.020
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 387 ccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagc 444
|||| ||||||| || | |||| | |||||| | ||||||||||||| ||||||||||
Sbjct: 475 ccaccccgccgtaggcgccttcctgacgcacagcggctggaactcggccctcgagagc 532
>emb|AJ438335.1|TAE438335 Triticum aestivum partial mRNA for glucosyltransferase (GbssI
gene), clone ugt4i13c
Length = 583
Score = 44.1 bits (22), Expect = 0.020
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 387 ccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagc 444
|||| ||||||| || | |||| | |||||| | ||||||||||||| ||||||||||
Sbjct: 475 ccaccccgccgtaggcgccttcctgacgcacagcggctggaactcggccctcgagagc 532
>gb|BG905834.1|BG905834 TaLr1142G10F TaLr1 Triticum aestivum cDNA clone TaLr1142G10 3',
mRNA sequence
Length = 573
Score = 42.1 bits (21), Expect = 0.077
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 406 ttcgtcacgcactgtggctggaactcggtcctcgaga 442
||||| ||||||||||| |||||||| ||||| ||||
Sbjct: 569 ttcgtgacgcactgtgggtggaactccgtcctggaga 533
>gb|AL828739.1|AL828739 AL828739 p:739 Triticum aestivum cDNA clone G05_p739_plate_8, mRNA
sequence
Length = 516
Score = 42.1 bits (21), Expect = 0.077
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 387 ccacgccgccgtgggaggcttcgtcacgcactgtggctggaactc 431
|||||||||| | || || ||||| |||||||| |||||||||||
Sbjct: 395 ccacgccgccctcggcgggttcgtgacgcactgcggctggaactc 439
>gb|CA638832.1|CA638832 wre1n.pk0016.h9 wre1n Triticum aestivum cDNA clone wre1n.pk0016.h9
5' end, mRNA sequence
Length = 568
Score = 42.1 bits (21), Expect = 0.077
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtg 351
||||||| |||||| ||||| ||||||||||||
Sbjct: 80 ttcttggagaggaccaaggacagagggctcgtg 112
>gb|CD895871.1|CD895871 G174.101C21F010821 G174 Triticum aestivum cDNA clone G174101C21,
mRNA sequence
Length = 619
Score = 42.1 bits (21), Expect = 0.077
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 406 ttcgtcacgcactgtggctggaactcggtcctcgaga 442
||||| ||||||||||| |||||||| ||||| ||||
Sbjct: 230 ttcgtgacgcactgtgggtggaactccgtcctggaga 266
>gb|CD918696.1|CD918696 G608.110I07F010910 G608 Triticum aestivum cDNA clone G608110I07,
mRNA sequence
Length = 683
Score = 42.1 bits (21), Expect = 0.077
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 387 ccacgccgccgtgggaggcttcgtcacgcactgtggctggaactc 431
|||||||||| | || || ||||| |||||||| |||||||||||
Sbjct: 404 ccacgccgccctcggcgggttcgtgacgcactgcggctggaactc 448
>gb|CV773219.1|CV773219 FGAS067615 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 853
Score = 42.1 bits (21), Expect = 0.077
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtg 351
||||||| |||||| ||||| ||||||||||||
Sbjct: 240 ttcttggagaggaccaaggacagagggctcgtg 272
>gb|CA612266.1|CA612266 wr1.pk0139.e8 wr1 Triticum aestivum cDNA clone wr1.pk0139.e8 5'
end, mRNA sequence
Length = 430
Score = 40.1 bits (20), Expect = 0.31
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 404 gcttcgtcacgcactgtggctggaactc 431
||||||| |||||||| |||||||||||
Sbjct: 23 gcttcgtgacgcactgcggctggaactc 50
>gb|CD881956.1|CD881956 F1.104N12F010330 F1 Triticum aestivum cDNA clone F1104N12, mRNA
sequence
Length = 662
Score = 40.1 bits (20), Expect = 0.31
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 404 gcttcgtcacgcactgtggctggaactc 431
||||| |||||||||| |||||||||||
Sbjct: 85 gcttcctcacgcactgcggctggaactc 112
>gb|CD922722.1|CD922722 G750.104K20F010529 G750 Triticum aestivum cDNA clone G750104K20,
mRNA sequence
Length = 488
Score = 40.1 bits (20), Expect = 0.31
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 405 cttcgtcacgcactgtggctggaactcg 432
|||||| |||||||| ||||||||||||
Sbjct: 440 cttcgtgacgcactgcggctggaactcg 467
>gb|CK211682.1|CK211682 FGAS023536 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1112
Score = 40.1 bits (20), Expect = 0.31
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 393 cgccgtgggaggcttcgtcacgcactgtggctggaactcg 432
||||||||| | |||||| || ||||| ||||||||||||
Sbjct: 543 cgccgtgggggccttcgtgacacactgcggctggaactcg 504
>gb|CN012928.1|CN012928 WHE3954_F06_L12ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3954_F06_L12,
mRNA sequence
Length = 578
Score = 40.1 bits (20), Expect = 0.31
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 404 gcttcgtcacgcactgtggctggaactc 431
||||||| |||||||| |||||||||||
Sbjct: 160 gcttcgtgacgcactgcggctggaactc 187
>gb|CV760335.1|CV760335 FGAS054719 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 877
Score = 40.1 bits (20), Expect = 0.31
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 404 gcttcgtcacgcactgtggctggaactc 431
||||| |||||||||| |||||||||||
Sbjct: 151 gcttcctcacgcactgcggctggaactc 178
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 250,670
Number of Sequences: 636343
Number of extensions: 250670
Number of successful extensions: 69584
Number of sequences better than 0.5: 35
Number of HSP's better than 0.5 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69516
Number of HSP's gapped (non-prelim): 65
length of query: 1063
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1043
effective length of database: 354,513,379
effective search space: 369757454297
effective search space used: 369757454297
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)