BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448637.2.1
(1190 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA484792.1|CA484792 WHE4310_G06_M12ZS Wheat meiotic anth... 507 e-142
gb|BJ308742.1|BJ308742 BJ308742 Y. Ogihara unpublished cDNA... 355 4e-096
gb|BJ302888.1|BJ302888 BJ302888 Y. Ogihara unpublished cDNA... 319 2e-085
gb|CD867975.1|CD867975 AZO2.107L04F001113 AZO2 Triticum aes... 157 2e-036
gb|CA645124.1|CA645124 wre1n.pk0087.c11 wre1n Triticum aest... 111 1e-022
gb|DR735836.1|DR735836 FGAS016879 Triticum aestivum FGAS: L... 109 4e-022
gb|BJ218161.1|BJ218161 BJ218161 Y. Ogihara unpublished cDNA... 72 1e-010
gb|BJ263565.1|BJ263565 BJ263565 Y. Ogihara unpublished cDNA... 70 4e-010
gb|BQ619973.1|BQ619973 TaLr1141C09F TaLr1 Triticum aestivum... 70 4e-010
gb|CD905904.1|CD905904 G468.103E19R010929 G468 Triticum aes... 70 4e-010
gb|CN008271.1|CN008271 WHE2639_C09_F17ZE Wheat Fusarium gra... 68 2e-009
gb|BF200436.1|BF200436 WHE2258_A12_B24ZE Triticum monococcu... 62 9e-008
gb|CA637838.1|CA637838 wre1n.pk0003.f3 wre1n Triticum aesti... 62 9e-008
gb|CD374025.1|CD374025 WHE2622_G07_M14ZT Sumai3 Wheat Fusar... 62 9e-008
gb|CD884224.1|CD884224 F1.115P05R010628 F1 Triticum aestivu... 46 0.006
gb|BE445402.1|BE445402 WHE1136_D04_H08ZS Wheat etiolated se... 40 0.34
gb|BG604505.1|BG604505 WHE0834_E01_I02ZS Wheat vernalized c... 40 0.34
gb|BJ306754.1|BJ306754 BJ306754 Y. Ogihara unpublished cDNA... 40 0.34
gb|BJ321866.1|BJ321866 BJ321866 Y. Ogihara unpublished cDNA... 40 0.34
gb|CA608442.1|CA608442 wr1.pk0088.c8 wr1 Triticum aestivum ... 40 0.34
gb|CA627543.1|CA627543 wdr1.pk0002.c6 wdr1 Triticum aestivu... 40 0.34
gb|CK156374.1|CK156374 FGAS037331 Triticum aestivum FGAS: T... 40 0.34
>gb|CA484792.1|CA484792 WHE4310_G06_M12ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4310_G06_M12, mRNA sequence
Length = 742
Score = 507 bits (256), Expect = e-142
Identities = 316/336 (94%)
Strand = Plus / Minus
Query: 384 gtcacacgaaggaccagttgacgaagcagaacgccaggcagtggatgttgctatcctcgc 443
||||||||||||||||||||||||||||||| ||||||||||| | |||||| ||||| |
Sbjct: 336 gtcacacgaaggaccagttgacgaagcagaatgccaggcagtgcacgttgctgtcctcac 277
Query: 444 cgagcaccttccacgctacagcttggtcgaaagaaacatggcggcccattcctgacatgc 503
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 276 cgagcaccttccacgccacagcttggtcgaaagaaacatggcgacccattcctgacatgc 217
Query: 504 acacgcctgacggcaggtacgcgtagccctgttccattagtttcgagatgtctgagaata 563
|||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 216 acacacctgatggcaggtatgcgtagccctgttccattagttttgagatatctgagaata 157
Query: 564 gtgctttccttcctgactcgtcgaagatcttgtctagcgtcaggtcttgcagcgcaacaa 623
|||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||
Sbjct: 156 ttgctttccttcctgactcgtcgaaaatcttgtctagtgtcaggtcttgcagcgcaataa 97
Query: 624 gagatgtttctaacatgtccagccctgccttgtttgcaaacgtaaacataggtttctcct 683
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 96 gagatgtttctaacatgtcaagccctgccttgtttgcaaatgtaaacataggtttctcct 37
Query: 684 taaaggagcagcacagaacagcatctggatgatgcc 719
|||| ||||||||||||||||| |||||||||||||
Sbjct: 36 taaaagagcagcacagaacagcgtctggatgatgcc 1
Score = 56.0 bits (28), Expect = 6e-006
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 283 caactagtgcatgcaacatatgccttttgtcacagctgatgattttcc 330
||||||||| ||||||||| || ||||| ||||||||||||||||||
Sbjct: 465 caactagtgattgcaacataagcattttgccacagctgatgattttcc 418
Score = 40.1 bits (20), Expect = 0.34
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 234 aacatctgaatggaatgacagaccaaaa 261
||||||||||||||||||| |||||||
Sbjct: 633 aacatctgaatggaatgacgaaccaaaa 606
>gb|BJ308742.1|BJ308742 BJ308742 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd17d11 3', mRNA sequence
Length = 719
Score = 355 bits (179), Expect = 4e-096
Identities = 470/567 (82%)
Strand = Plus / Plus
Query: 385 tcacacgaaggaccagttgacgaagcagaacgccaggcagtggatgttgctatcctcgcc 444
||||||||||||||||||||||||||| | ||||||||||||| | ||| ||||||||
Sbjct: 145 tcacacgaaggaccagttgacgaagcacagggccaggcagtggacgccgctgtcctcgcc 204
Query: 445 gagcaccttccacgctacagcttggtcgaaagaaacatggcggcccattcctgacatgca 504
||||||||||||||| || || |||||||| || || || |||||||| || ||||||||
Sbjct: 205 gagcaccttccacgccacggcctggtcgaaggacacgtgccggcccatccccgacatgca 264
Query: 505 cacgcctgacggcaggtacgcgtagccctgttccattagtttcgagatgtctgagaatag 564
||||||||| ||||||||| | | ||||| ||||| | ||| ||||| || | |||||
Sbjct: 265 cacgcctgatggcaggtacacatggccctcttccaccaattttgagatctccgtgaataa 324
Query: 565 tgctttccttcctgactcgtcgaagatcttgtctagcgtcaggtcttgcagcgcaacaag 624
|||||| ||||| | ||| |||||||||||||| || ||||||||||||| || || ||
Sbjct: 325 tgcttttcttccaggctcatcgaagatcttgtccagtgtcaggtcttgcaaggcgacgag 384
Query: 625 agatgtttctaacatgtccagccctgccttgtttgcaaacgtaaacataggtttctcctt 684
|| |||||||||||||| || ||||||||||| || || || |||| ||| |||||
Sbjct: 385 ggaagtttctaacatgtcaaggcctgccttgttggcgaatgtgaacacgggtacttcctt 444
Query: 685 aaaggagcagcacagaacagcatctggatgatgccagagcattttcaacaatgcttcacc 744
||| ||||||||||| | |||||| | | ||||| ||||| |||||||||||||| ||
Sbjct: 445 aaaagagcagcacaggatggcatcttggtagtgccatagcatcttcaacaatgcttcccc 504
Query: 745 agctccatctgattgattaagtaattccatacctagatggtagtgataactctggcaaac 804
|||| ||||||||||| |||||| || | ||||||||||| ||||| ||||||||||
Sbjct: 505 agctacatctgattgagcaagtaactctacccctagatggtaatgatagctctggcaaat 564
Query: 805 ccatctagcaagtgtggcagcttcagggaagccagaaagcatcctatgcccagcatttag 864
||| | ||||||||| || |||||||| | |||||| || ||||| ||||| |||||||
Sbjct: 565 ccaccgagcaagtgtcgctgcttcaggaaggccagagagtatcctctgcccggcatttat 624
Query: 865 accagattgggagggagatatagccatcgacactctttgcacagcagaaatgacactacg 924
||||||||| || || |||||||| |||||||||||||| |||||||| | | |||||
Sbjct: 625 accagattgagatggggatatagcaatcgacactctttgaacagcagagacaatgctacg 684
Query: 925 aacatattgacgggccattgctgcaac 951
||| || ||||||||||| ||||||||
Sbjct: 685 aacgtactgacgggccatagctgcaac 711
>gb|BJ302888.1|BJ302888 BJ302888 Y. Ogihara unpublished cDNA library, Wh_yd Triticum aestivum
cDNA clone whyd17d11 5', mRNA sequence
Length = 560
Score = 319 bits (161), Expect = 2e-085
Identities = 406/487 (83%), Gaps = 3/487 (0%)
Strand = Plus / Minus
Query: 602 gtcaggtcttgcagcgcaacaagagatgtttctaacatgtccagccctgccttgtttgca 661
||||||||||||| || || || || |||||||||||||| || ||||||||||| ||
Sbjct: 555 gtcaggtcttgcaaggcgacgagggaagtttctaacatgtcaaggcctgccttgttggcg 496
Query: 662 aacgtaaacataggtttctccttaaaggagcagcacagaacagcatctggatgatgccag 721
|| || |||| ||| |||||||| ||||||||||| | |||||| | | |||||
Sbjct: 495 aatgtgaacacgggtacttccttaaaagagcagcacaggatggcatcttggtagtgccat 436
Query: 722 agcattttcaacaatgcttcaccagctccatctgattgattaagtaattccatacctaga 781
||||| |||||||||||||| |||||| ||||||||||| |||||| || | ||||||
Sbjct: 435 agcatcttcaacaatgcttccccagctacatctgattgagcaagtaactctacccctaga 376
Query: 782 tggtagtgataactctggcaaacccatctagcaagtgtggcagcttcagggaagccagaa 841
||||| ||||| |||||||||| ||| | ||||||||| || |||||||| | ||||||
Sbjct: 375 tggtaatgatagctctggcaaatccaccgagcaagtgtcgctgcttcaggaaggccagag 316
Query: 842 agcatcctatgcccagcatttagaccagattgggagggagatatagccatcgacactctt 901
|| ||||| ||||| ||||||| ||||||||| || || |||||||| ||||||||||||
Sbjct: 315 agtatcctctgcccggcatttataccagattgagatggggatatagcaatcgacactctt 256
Query: 902 tgcacagcagaaatgacactacgaacatattgacgggccattgctgcaacgctgtcctga 961
|| |||||||| | | |||||||| || ||||||||||| |||||||| || || ||
Sbjct: 255 tgaacagcagagacaatgctacgaacgtactgacgggccatagctgcaacactatcttgg 196
Query: 962 aggtgcatctcatacgggaattgaaaggcgattgtcagcacagatctcaaattgcagtca 1021
|| |||| |||||| |||||||||||||||||||||||||||||||||| ||| || |||
Sbjct: 195 agatgcagctcataagggaattgaaaggcgattgtcagcacagatctcacattacaatca 136
Query: 1022 tctggagatgcatcccctgaggcttggggtgcagcagagcccacatcaagactagatgcc 1081
|||||||||||| || |||||||||| ||||| |||||| || ||||| |||||||||
Sbjct: 135 tctggagatgca---ccggaggcttgggctgcagtagagcctacttcaaggctagatgcc 79
Query: 1082 aaatcta 1088
|||||||
Sbjct: 78 aaatcta 72
>gb|CD867975.1|CD867975 AZO2.107L04F001113 AZO2 Triticum aestivum cDNA clone AZO2107L04,
mRNA sequence
Length = 571
Score = 157 bits (79), Expect = 2e-036
Identities = 124/139 (89%)
Strand = Plus / Minus
Query: 385 tcacacgaaggaccagttgacgaagcagaacgccaggcagtggatgttgctatcctcgcc 444
||||||||||||||||||||||||||| || ||||||||||||| | |||| ||||||||
Sbjct: 300 tcacacgaaggaccagttgacgaagcacaaggccaggcagtggacgctgctgtcctcgcc 241
Query: 445 gagcaccttccacgctacagcttggtcgaaagaaacatggcggcccattcctgacatgca 504
||||||||||||||| || || |||||||| || || || |||||||| || ||||||||
Sbjct: 240 gagcaccttccacgccacggcctggtcgaaggacacgtgccggcccatccccgacatgca 181
Query: 505 cacgcctgacggcaggtac 523
||||||||| |||||||||
Sbjct: 180 cacgcctgatggcaggtac 162
>gb|CA645124.1|CA645124 wre1n.pk0087.c11 wre1n Triticum aestivum cDNA clone
wre1n.pk0087.c11 5' end, mRNA sequence
Length = 293
Score = 111 bits (56), Expect = 1e-022
Identities = 95/108 (87%)
Strand = Plus / Minus
Query: 385 tcacacgaaggaccagttgacgaagcagaacgccaggcagtggatgttgctatcctcgcc 444
||||||||||||||||||||||||||| || ||||||||||||| |||| ||||||||
Sbjct: 113 tcacacgaaggaccagttgacgaagcacaaggccaggcagtggaccctgctgtcctcgcc 54
Query: 445 gagcaccttccacgctacagcttggtcgaaagaaacatggcggcccat 492
||||||||||||||| || || |||||||| || || || ||||||||
Sbjct: 53 gagcaccttccacgccacggcctggtcgaaggacacgtgccggcccat 6
>gb|DR735836.1|DR735836 FGAS016879 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1018
Score = 109 bits (55), Expect = 4e-022
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 385 tcacacgaaggaccagttgacgaagcagaacgccaggcagtggatgttgctatcctcgcc 444
||||||||||||||||||||||||||| || ||||||||||||| | |||| ||||||||
Sbjct: 183 tcacacgaaggaccagttgacgaagcacaaggccaggcagtggacgctgctgtcctcgcc 242
Query: 445 gagcaccttccacgc 459
|||||||||||||||
Sbjct: 243 gagcaccttccacgc 257
>gb|BJ218161.1|BJ218161 BJ218161 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh36f11 3', mRNA sequence
Length = 636
Score = 71.9 bits (36), Expect = 1e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 385 tcacacgaaggaccagttgacgaagcagaacgccaggcagtgga 428
||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 589 tcacacgaaggaccagttgacgaagcacaaggccaggcagtgga 632
>gb|BJ263565.1|BJ263565 BJ263565 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh5d05 3', mRNA sequence
Length = 599
Score = 69.9 bits (35), Expect = 4e-010
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 385 tcacacgaaggaccagttgacgaagcagaacgccaggcagtggatgttgctatcctcgcc 444
||||||||| |||||||||||||||||||| || |||||||| | |||| | ||||| ||
Sbjct: 417 tcacacgaaagaccagttgacgaagcagaaggcgaggcagtgcacgttgttgtcctcacc 476
Query: 445 gagcaccttccacgctacagcttggtcgaaagaaacatggcggcccattcctgacatgca 504
| || ||||| |||||||| | || || || |||||||||||||| || |||| |||
Sbjct: 477 aactactttccatgctacagcattctcaaatgagacatggcggcccatcccagacaagca 536
Query: 505 cac 507
|||
Sbjct: 537 cac 539
>gb|BQ619973.1|BQ619973 TaLr1141C09F TaLr1 Triticum aestivum cDNA clone TaLr1141C09F, mRNA
sequence
Length = 649
Score = 69.9 bits (35), Expect = 4e-010
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 385 tcacacgaaggaccagttgacgaagcagaacgccaggcagtggatgttgctatcctcgcc 444
||||||||| |||||||||||||||||||| || |||||||| | |||| | ||||| ||
Sbjct: 348 tcacacgaaagaccagttgacgaagcagaaggcgaggcagtgcacgttgttgtcctcacc 407
Query: 445 gagcaccttccacgctacagcttggtcgaaagaaacatggcggcccattcctgacatgca 504
| || ||||| |||||||| | || || || |||||||||||||| || |||| |||
Sbjct: 408 aactactttccatgctacagcattctcaaatgagacatggcggcccatcccagacaagca 467
Query: 505 cac 507
|||
Sbjct: 468 cac 470
>gb|CD905904.1|CD905904 G468.103E19R010929 G468 Triticum aestivum cDNA clone G468103E19,
mRNA sequence
Length = 643
Score = 69.9 bits (35), Expect = 4e-010
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 385 tcacacgaaggaccagttgacgaagcagaacgccaggcagtggatgttgctatcctcgcc 444
||||||||| |||||||||||||||||||| || |||||||| | |||| | ||||| ||
Sbjct: 303 tcacacgaaagaccagttgacgaagcagaaggcgaggcagtgcacgttgttgtcctcacc 362
Query: 445 gagcaccttccacgctacagcttggtcgaaagaaacatggcggcccattcctgacatgca 504
| || ||||| |||||||| | || || || |||||||||||||| || |||| |||
Sbjct: 363 aactactttccatgctacagcattctcaaatgagacatggcggcccatcccagacaagca 422
Query: 505 cac 507
|||
Sbjct: 423 cac 425
>gb|CN008271.1|CN008271 WHE2639_C09_F17ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2639_C09_F17,
mRNA sequence
Length = 592
Score = 67.9 bits (34), Expect = 2e-009
Identities = 115/142 (80%)
Strand = Plus / Minus
Query: 866 ccagattgggagggagatatagccatcgacactctttgcacagcagaaatgacactacga 925
|||||| | |||||||| ||||||||||||||||| || || || || | | || ||
Sbjct: 583 ccagatcgagagggagagatagccatcgacactctctgaacggcggagacaatgctgcgg 524
Query: 926 acatattgacgggccattgctgcaacgctgtcctgaaggtgcatctcatacgggaattga 985
||||| || |||||||| | |||||| || || || || |||||||| || |||||||||
Sbjct: 523 acatactgccgggccatagttgcaacactatcttggagatgcatctcgtaagggaattga 464
Query: 986 aaggcgattgtcagcacagatc 1007
||||| ||||||||||| ||||
Sbjct: 463 aaggcaattgtcagcactgatc 442
>gb|BF200436.1|BF200436 WHE2258_A12_B24ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE2258_A12_B24, mRNA
sequence
Length = 458
Score = 61.9 bits (31), Expect = 9e-008
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 385 tcacacgaaggaccagttgacgaagcagaacgccaggcagtggatgttgctatcctcgcc 444
||||||||| |||||||||||||||||||| || |||||||| | ||| | ||||| ||
Sbjct: 217 tcacacgaaagaccagttgacgaagcagaaggcgaggcagtgcacattgttgtcctcacc 158
Query: 445 gagcaccttccacgctacagcttggtcgaaagaaacatggcggcccattcctgacatgca 504
| || ||||| |||||||| | || || || |||||||||||||| || |||| |||
Sbjct: 157 aactactttccatgctacagcattctcaaatgagacatggcggcccatcccagacaagca 98
Query: 505 cac 507
|||
Sbjct: 97 cac 95
>gb|CA637838.1|CA637838 wre1n.pk0003.f3 wre1n Triticum aestivum cDNA clone wre1n.pk0003.f3 5'
end, mRNA sequence
Length = 546
Score = 61.9 bits (31), Expect = 9e-008
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 866 ccagattgggagggagatatagccatcgacactctttgcacagcagaaatgacactacga 925
|||||| | |||||||| |||||||| |||||||| || || || || | | || ||
Sbjct: 243 ccagatggagagggagagatagccatngacactctctgaacggcggagacaatgctgcgg 184
Query: 926 acatattgacgggccattgctgcaacgctgtcctgaaggtgcatctcatacgggaattga 985
||||| || |||||||| | |||||| || || || || |||||||| || |||||||||
Sbjct: 183 acatactgccgggccatagttgcaacactatcttggagatgcatctcgtaagggaattga 124
Query: 986 aaggcgattgtcagcacagatc 1007
||||| ||||||||||| ||||
Sbjct: 123 aaggcaattgtcagcactgatc 102
>gb|CD374025.1|CD374025 WHE2622_G07_M14ZT Sumai3 Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE2622_G07_M14, mRNA sequence
Length = 676
Score = 61.9 bits (31), Expect = 9e-008
Identities = 100/123 (81%)
Strand = Plus / Plus
Query: 385 tcacacgaaggaccagttgacgaagcagaacgccaggcagtggatgttgctatcctcgcc 444
||||||||| |||||||||||||||||||| || |||||||| | ||| | ||||| ||
Sbjct: 234 tcacacgaaagaccagttgacgaagcagaaggcgaggcagtgcacattgttgtcctcacc 293
Query: 445 gagcaccttccacgctacagcttggtcgaaagaaacatggcggcccattcctgacatgca 504
| || ||||| |||||||| | || || || |||||||||||||| || |||| |||
Sbjct: 294 aactactttccatgctacagcattctcaaatgagacatggcggcccatcccagacaagca 353
Query: 505 cac 507
|||
Sbjct: 354 cac 356
Score = 52.0 bits (26), Expect = 9e-005
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 655 gtttgcaaacgtaaacataggtttctccttaaaggagcagcacagaacagcatctggatg 714
||||||||||||||| | ||| || ||||| || || ||||||| || ||||||| |||
Sbjct: 504 gtttgcaaacgtaaatacaggcttttccttgaaagaacagcacaaaatagcatcttcatg 563
Query: 715 atgccagagcattttcaa 732
|| |||||||||| ||||
Sbjct: 564 atcccagagcattctcaa 581
>gb|CD884224.1|CD884224 F1.115P05R010628 F1 Triticum aestivum cDNA clone F1115P05, mRNA
sequence
Length = 424
Score = 46.1 bits (23), Expect = 0.006
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 385 tcacacgaaggaccagttga-cgaagcagaacgccaggcagtg 426
||||||||| |||||||||| |||||||||| || ||||||||
Sbjct: 347 tcacacgaaagaccagttgaccgaagcagaaggcgaggcagtg 389
>gb|BE445402.1|BE445402 WHE1136_D04_H08ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1136_D04_H08,
mRNA sequence
Length = 329
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 389 acgaaggaccagttgacgaa 408
||||||||||||||||||||
Sbjct: 124 acgaaggaccagttgacgaa 143
>gb|BG604505.1|BG604505 WHE0834_E01_I02ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0834_E01_I02, mRNA sequence
Length = 550
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 389 acgaaggaccagttgacgaa 408
||||||||||||||||||||
Sbjct: 404 acgaaggaccagttgacgaa 385
>gb|BJ306754.1|BJ306754 BJ306754 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd5c13 3', mRNA sequence
Length = 669
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 389 acgaaggaccagttgacgaa 408
||||||||||||||||||||
Sbjct: 175 acgaaggaccagttgacgaa 194
>gb|BJ321866.1|BJ321866 BJ321866 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf22l02 3', mRNA sequence
Length = 653
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 389 acgaaggaccagttgacgaa 408
||||||||||||||||||||
Sbjct: 175 acgaaggaccagttgacgaa 194
>gb|CA608442.1|CA608442 wr1.pk0088.c8 wr1 Triticum aestivum cDNA clone wr1.pk0088.c8 5'
end, mRNA sequence
Length = 508
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 389 acgaaggaccagttgacgaa 408
||||||||||||||||||||
Sbjct: 370 acgaaggaccagttgacgaa 351
>gb|CA627543.1|CA627543 wdr1.pk0002.c6 wdr1 Triticum aestivum cDNA clone wdr1.pk0002.c6 5'
end, mRNA sequence
Length = 526
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 389 acgaaggaccagttgacgaa 408
||||||||||||||||||||
Sbjct: 397 acgaaggaccagttgacgaa 378
>gb|CK156374.1|CK156374 FGAS037331 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 883
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 850 atgcccagcatttagaccag 869
||||||||||||||||||||
Sbjct: 842 atgcccagcatttagaccag 823
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 184,138
Number of Sequences: 636343
Number of extensions: 184138
Number of successful extensions: 47960
Number of sequences better than 0.5: 22
Number of HSP's better than 0.5 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 47902
Number of HSP's gapped (non-prelim): 49
length of query: 1190
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1170
effective length of database: 354,513,379
effective search space: 414780653430
effective search space used: 414780653430
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)