BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441276.2.1
(1796 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY376128.1| Triticum aestivum ETTIN-like auxin response ... 474 e-131
gb|CA498059.1|CA498059 WHE3237_G05_M09ZT Wheat meiotic anth... 115 1e-023
gb|AY376129.1| Triticum aestivum ETTIN-like auxin response ... 111 2e-022
gb|CV764620.1|CV764620 FGAS059005 Triticum aestivum FGAS: L... 94 4e-017
gb|CA735236.1|CA735236 wpi1s.pk003.n4 wpi1s Triticum aestiv... 92 2e-016
gb|CA642606.1|CA642606 wre1n.pk0057.c11 wre1n Triticum aest... 78 2e-012
gb|CV770790.1|CV770790 FGAS065183 Triticum aestivum FGAS: L... 54 3e-005
gb|BQ162117.1|BQ162117 WHE0497_B02_D03ZT Wheat Fusarium gra... 52 1e-004
gb|BG909608.1|BG909608 TaLr1106C04R TaLr1 Triticum aestivum... 50 5e-004
gb|BM138397.1|BM138397 WHE0497_B02_D03ZS Wheat Fusarium gra... 50 5e-004
gb|BQ620834.1|BQ620834 TaLr1104D08R TaLr1 Triticum aestivum... 50 5e-004
gb|AL821805.1|AL821805 AL821805 N:130 Triticum aestivum cDN... 50 5e-004
gb|CA502175.1|CA502175 WHE4043_G07_N13ZT Wheat meiotic anth... 50 5e-004
gb|CD918964.1|CD918964 G608.111I19F010911 G608 Triticum aes... 50 5e-004
gb|CB307104.1|CB307104 HFIG089 Hessian fly infested cDNA li... 50 5e-004
gb|BE442731.1|BE442731 WHE1105_D08_G15ZS Wheat etiolated se... 48 0.002
gb|CD452471.1|CD452471 WHE1105_D08_G15ZT CS wheat etiolated... 48 0.002
gb|CK156495.1|CK156495 FGAS037431 Triticum aestivum FGAS: T... 48 0.002
gb|CN010916.1|CN010916 WHE3877_F12_L23ZS Wheat Fusarium gra... 48 0.002
gb|AL809244.1|AL809244 AL809244 a:11 Triticum aestivum cDNA... 48 0.002
gb|AY376130.1| Triticum aestivum ETTIN-like auxin response ... 48 0.002
gb|BE443666.1|BE443666 WHE1121_F08_K15ZS Wheat etiolated se... 44 0.033
gb|BE444190.1|BE444190 WHE1128_C06_F12ZS Wheat etiolated se... 44 0.033
gb|CA727373.1|CA727373 wdi1c.pk001.k15 wdi1c Triticum aesti... 44 0.033
>gb|AY376128.1| Triticum aestivum ETTIN-like auxin response factor (ETT1-alpha) mRNA,
partial cds
Length = 2256
Score = 474 bits (239), Expect = e-131
Identities = 575/687 (83%)
Strand = Plus / Minus
Query: 1090 tgttactcgcatcgttggagcaacttcgttcatcaatgtactgcatgttcgttgcttcgc 1149
|||||||| ||| ||| ||||||| ||||||||| |||||||||| ||| ||||||| |
Sbjct: 1226 tgttactcccattgttagagcaacctcgttcatcgatgtactgcaagtttcttgcttcac 1167
Query: 1150 atggctgagaagttgcaacagcagcattgtcatgagttctataacccagtaattcttgac 1209
||||||| ||||| |||||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 1166 atggctgtgaagtagcaacagcagtaccatcatgagttctataacccaataattcttgac 1107
Query: 1210 cttgcaagaccttgtggaattgggcagattccgcaaaatcaggacgaccgcttccatttg 1269
|||||||||||||| ||| ||| ||||| || ||||||||||| ||||| | ||||| ||
Sbjct: 1106 cttgcaagaccttgcggacttgtgcagactcagcaaaatcagggcgaccacctccatgtg 1047
Query: 1270 gaactaggtagtctggattaacatggggaagacatggtttcagtctctttgcatttggtg 1329
||||| | | || |||||| |||||||||| |||| |||| | ||||| | ||||||
Sbjct: 1046 gaactgtgaattccggattagcatggggaaggtatggcttcatccgctttgaagttggtg 987
Query: 1330 cagacatgtgagatcctgaaactgaactagtcagctcaatctcccaaggagaaatcctgt 1389
| | || || ||||||||| ||||||| ||||||||||||||||||||||| | |||||
Sbjct: 986 cggccagatgggatcctgaagctgaactggtcagctcaatctcccaaggagataccctgt 927
Query: 1390 ttggttgacgaaaatctacatcgtcatcccatcggaccatcaaacatttccatttcgaac 1449
||||| ||||||| || |||| |||||||| | |||| || |||||||| || ||||
Sbjct: 926 ttggtcgacgaaactcaccatcatcatcccaccttaccagcaggcatttccactttgaac 867
Query: 1450 cacgccacatggggtcagcatcaccaattcctgctatgatccctgtgcatcttctttcag 1509
|||||||||| ||||| ||||||||| |||| | || ||||||||| | ||||||||||
Sbjct: 866 cacgccacatagggtctgcatcaccagttccagtaattatccctgtgtaccttctttcag 807
Query: 1510 aagcatcatcgctctcatatctcactttgaacctcgaaccagcagaaaatggttgactga 1569
|||||| || || |||||||||| |||||||||||| ||| |||||||||||||||| |
Sbjct: 806 cagcatcctcactttcatatctcattttgaacctcgatccaacagaaaatggttgactaa 747
Query: 1570 agctcttgataaacttcgaaaatggtataatgaattcagattggcttaatctggggttgt 1629
|||| ||| | |||||| | | |||| |||||||||||||| ||||| |||||||| |
Sbjct: 746 agcttttggtgaacttccagtagggtacgatgaattcagattgacttaacctggggttat 687
Query: 1630 agtagatgtggaacacacttttggtggccacagcatgtgcaacattaggtagtgaaccaa 1689
|| |||| ||||||| || || || ||||||||||| |||||||||| ||||| |||||
Sbjct: 686 agaagatctggaacatgctctttgtagccacagcatgagcaacattagctagtgtaccaa 627
Query: 1690 gatttgagcactggttataaagagctggaaaagcagatccatttttaagctgagctgcac 1749
|||| ||||| ||| ||||||| || |||||||||||||||||||| |||||| | ||||
Sbjct: 626 gattcgagcattggctataaagcgccggaaaagcagatccatttttgagctgaaccgcac 567
Query: 1750 ggcgcactccaagtcttagctccccat 1776
|||| ||||| || || ||||||||||
Sbjct: 566 ggcgtactcccagcctaagctccccat 540
Score = 115 bits (58), Expect = 1e-023
Identities = 115/134 (85%)
Strand = Plus / Minus
Query: 899 accatcttgctgatggaagccactattactcaagcttgcatcgaccagagttcctctgta 958
||||||||||||||| ||||| | | | |||| || ||||| |||||| |||||| |||
Sbjct: 1411 accatcttgctgatgaaagccgccacttctcatgcgcgcatcaaccagacttcctcggta 1352
Query: 959 gggatgaaatacttcttgaccttgcaagaccttttggaatcttggagactccccaaagcc 1018
||| | || |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1351 cggacggaaaacttcttgaccttgcaagaccttttggaatctctgagactccccaaagcc 1292
Query: 1019 tgagcaacggtagg 1032
|||||| ||||||
Sbjct: 1291 agagcaatggtagg 1278
Score = 93.7 bits (47), Expect = 4e-017
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 378 acaacaggcctctgctcatgaacggtggcacagctgttgcccagcgatttcggcacttgt 437
||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 1905 acaacaggcctctgctcatgaacagtggcacaactgttgccgagggatttcggcacttgc 1846
Query: 438 tgcttca 444
|||||||
Sbjct: 1845 tgcttca 1839
Score = 48.1 bits (24), Expect = 0.002
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1202 ttcttgaccttgcaagaccttgtggaat 1229
||||||||||||||||||||| ||||||
Sbjct: 1339 ttcttgaccttgcaagaccttttggaat 1312
Score = 44.1 bits (22), Expect = 0.033
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 966 aatacttcttgaccttgcaagacctt 991
|||| |||||||||||||||||||||
Sbjct: 1119 aataattcttgaccttgcaagacctt 1094
>gb|CA498059.1|CA498059 WHE3237_G05_M09ZT Wheat meiotic anther cDNA library Triticum aestivum
cDNA clone WHE3237_G05_M09, mRNA sequence
Length = 534
Score = 115 bits (58), Expect = 1e-023
Identities = 115/134 (85%)
Strand = Plus / Minus
Query: 899 accatcttgctgatggaagccactattactcaagcttgcatcgaccagagttcctctgta 958
||||||||| || || ||||| | ||| |||| || |||||| |||||| |||||| |||
Sbjct: 171 accatcttgttgttgaaagccgccatttctcatgcgtgcatcaaccagacttcctcggta 112
Query: 959 gggatgaaatacttcttgaccttgcaagaccttttggaatcttggagactccccaaagcc 1018
||| | || |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 111 cggacggaaaacttcttgaccttgcaagaccttttggaatctctgagactccccaaagcc 52
Query: 1019 tgagcaacggtagg 1032
|||||| ||||||
Sbjct: 51 agagcaatggtagg 38
Score = 48.1 bits (24), Expect = 0.002
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1202 ttcttgaccttgcaagaccttgtggaat 1229
||||||||||||||||||||| ||||||
Sbjct: 99 ttcttgaccttgcaagaccttttggaat 72
>gb|AY376129.1| Triticum aestivum ETTIN-like auxin response factor (ETT2-alpha) mRNA,
partial cds
Length = 2372
Score = 111 bits (56), Expect = 2e-022
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 969 acttcttgaccttgcaagaccttttggaatcttggagactccccaaagcctgagcaacgg 1028
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 1386 acttcttgaccttgcaagaccttttggaatctttgagactccccaaagcctgagcagtgg 1327
Query: 1029 taggaaaa 1036
||||||||
Sbjct: 1326 taggaaaa 1319
Score = 91.7 bits (46), Expect = 2e-016
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 1192 aacccagtaattcttgaccttgcaagaccttgtggaattgggcagattccgcaaaatc 1249
|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1157 aacccaataattcttgaccttgcaagaccttgtggaatctggcagattccgcaaaatc 1100
Score = 79.8 bits (40), Expect = 6e-013
Identities = 166/208 (79%)
Strand = Plus / Minus
Query: 1552 cagaaaatggttgactgaagctcttgataaacttcgaaaatggtataatgaattcagatt 1611
||||||| |||||||||||||| | || |||||| || |||||| |||||| ||||| |
Sbjct: 797 cagaaaaaggttgactgaagcttctcatgaacttccaatatggtacaatgaactcagact 738
Query: 1612 ggcttaatctggggttgtagtagatgtggaacacacttttggtggccacagcatgtgcaa 1671
| ||| ||||| |||||||||||||| || | |||||| | ||||||||||| ||||
Sbjct: 737 cacataacctgggattgtagtagatgtgaaaaatacttttcatagccacagcatgggcaa 678
Query: 1672 cattaggtagtgaaccaagatttgagcactggttataaagagctggaaaagcagatccat 1731
||||| || || |||| |||| ||||||| |||| || ||||||| ||| |||
Sbjct: 677 cattaccgagactacgaagacttgaatcctggttaaaaagtgcaggaaaaggggatacat 618
Query: 1732 ttttaagctgagctgcacggcgcactcc 1759
|||| |||||||| || |||||||||||
Sbjct: 617 tttttagctgagcagctcggcgcactcc 590
Score = 56.0 bits (28), Expect = 9e-006
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 1404 tctacatcgtcatcccatcggaccatcaaacatttccatttcgaacca 1451
|||||||| |||||||||| |||| |||||||||||| |||||||||
Sbjct: 945 tctacatcatcatcccatctcaccaccaaacatttccacttcgaacca 898
Score = 54.0 bits (27), Expect = 3e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 966 aatacttcttgaccttgcaagaccttttggaatct 1000
|||| ||||||||||||||||||||| ||||||||
Sbjct: 1152 aataattcttgaccttgcaagaccttgtggaatct 1118
Score = 52.0 bits (26), Expect = 1e-004
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 334 atcagatcatcatatccactgttgaaacgtcaatcaccctagcaacaacaggcctctgct 393
||||||||||| |||| || | |||| ||||| |||| | ||||| ||||||| ||||
Sbjct: 2021 atcagatcatcgtatcaaccgcagaaaggtcaaccaccatgccaacagcaggcctttgct 1962
Query: 394 catgaacggtggcacagctgttgcccagcgattt 427
||||||| || ||||| |||||||| || |||||
Sbjct: 1961 catgaacagtagcacaactgttgcctagtgattt 1928
Score = 48.1 bits (24), Expect = 0.002
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1202 ttcttgaccttgcaagaccttgtggaat 1229
||||||||||||||||||||| ||||||
Sbjct: 1384 ttcttgaccttgcaagaccttttggaat 1357
>gb|CV764620.1|CV764620 FGAS059005 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 852
Score = 93.7 bits (47), Expect = 4e-017
Identities = 114/135 (84%), Gaps = 1/135 (0%)
Strand = Plus / Minus
Query: 899 accatcttgctgatggaagccactattactcaagcttgcatcgaccagagttcctctgta 958
||||||||| || || ||||| | ||| |||| || ||||| |||||| |||||| |||
Sbjct: 393 accatcttgttgttgaaagccgccatttctcatgcgcgcatcaaccagacttcctcggta 334
Query: 959 gggatgaaatacttcttgaccttgcaagacc-ttttggaatcttggagactccccaaagc 1017
||| | || ||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 333 cggacggaaaacttcttgaccttgcaagacctttttggaatctctgagactccccaaagc 274
Query: 1018 ctgagcaacggtagg 1032
| |||||| ||||||
Sbjct: 273 cagagcaatggtagg 259
Score = 79.8 bits (40), Expect = 6e-013
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 1090 tgttactcgcatcgttggagcaacttcgttcatcaatgtactgcatgttcgttgcttcgc 1149
|||||||| ||| ||| ||||||| ||||||||| |||||||||| ||| ||||||| |
Sbjct: 207 tgttactcacattgttagagcaacctcgttcatcgatgtactgcaagtttcttgcttcac 148
Query: 1150 atggctgagaagttgcaacagcagcattgtcatgagttct 1189
||||||| ||||| |||||||||| | |||||||||||
Sbjct: 147 atggctgtgaagtagcaacagcagtaccatcatgagttct 108
Score = 42.1 bits (21), Expect = 0.13
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1202 ttcttgaccttgcaagacctt 1222
|||||||||||||||||||||
Sbjct: 321 ttcttgaccttgcaagacctt 301
>gb|CA735236.1|CA735236 wpi1s.pk003.n4 wpi1s Triticum aestivum cDNA clone wpi1s.pk003.n4 5'
end, mRNA sequence
Length = 460
Score = 91.7 bits (46), Expect = 2e-016
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 1192 aacccagtaattcttgaccttgcaagaccttgtggaattgggcagattccgcaaaatc 1249
|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 36 aacccaataattcttgaccttgcaagaccttgtggaatctggcagattccgcaaaatc 93
Score = 56.0 bits (28), Expect = 9e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1404 tctacatcgtcatcccatcggaccatcaaacatttccatttcgaacca 1451
|||||||| |||||||||| |||| |||||||||||| |||||||||
Sbjct: 248 tctacatcatcatcccatctcaccaccaaacatttccacttcgaacca 295
Score = 54.0 bits (27), Expect = 3e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 966 aatacttcttgaccttgcaagaccttttggaatct 1000
|||| ||||||||||||||||||||| ||||||||
Sbjct: 41 aataattcttgaccttgcaagaccttgtggaatct 75
>gb|CA642606.1|CA642606 wre1n.pk0057.c11 wre1n Triticum aestivum cDNA clone wre1n.pk0057.c11
5' end, mRNA sequence
Length = 535
Score = 77.8 bits (39), Expect = 2e-012
Identities = 96/115 (83%)
Strand = Plus / Minus
Query: 1620 ctggggttgtagtagatgtggaacacacttttggtggccacagcatgtgcaacattaggt 1679
|||||||| ||| |||| ||||||| || || || ||||||||||| |||||||||| |
Sbjct: 175 ctggggttatagaagatctggaacatgctctttgtagccacagcatgagcaacattagct 116
Query: 1680 agtgaaccaagatttgagcactggttataaagagctggaaaagcagatccatttt 1734
|||| |||||||| ||||| ||| ||||||| || |||||| || |||||||||
Sbjct: 115 agtgtcccaagattcgagcattggctataaagcgccggaaaatcaaatccatttt 61
>gb|CV770790.1|CV770790 FGAS065183 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 882
Score = 54.0 bits (27), Expect = 3e-005
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 402 gtggcacagctgttgcccagcgatttcggcacttgttgcttca 444
|||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 614 gtggcacaactgttgccgagggatttcggcacttgctgcttca 572
Score = 46.1 bits (23), Expect = 0.008
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 378 acaacaggcctctgctcatgaac 400
|||||||||||||||||||||||
Sbjct: 713 acaacaggcctctgctcatgaac 691
>gb|BQ162117.1|BQ162117 WHE0497_B02_D03ZT Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0497_B02_D03,
mRNA sequence
Length = 649
Score = 52.0 bits (26), Expect = 1e-004
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 334 atcagatcatcatatccactgttgaaacgtcaatcaccctagcaacaacaggcctctgct 393
||||||||||| |||| || | |||| ||||| |||| | ||||| ||||||| ||||
Sbjct: 337 atcagatcatcgtatcaaccgcagaaaggtcaaccaccatgccaacagcaggcctttgct 396
Query: 394 catgaacggtggcacagctgttgcccagcgattt 427
||||||| || ||||| |||||||| || |||||
Sbjct: 397 catgaacagtagcacaactgttgcctagtgattt 430
>gb|BG909608.1|BG909608 TaLr1106C04R TaLr1 Triticum aestivum cDNA clone TaLr1106C04 5', mRNA
sequence
Length = 524
Score = 50.1 bits (25), Expect = 5e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1200 aattcttgaccttgcaagaccttgtggaa 1228
||||||||||||||||||||| |||||||
Sbjct: 273 aattcttgaccttgcaagaccctgtggaa 245
>gb|BM138397.1|BM138397 WHE0497_B02_D03ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0497_B02_D03,
mRNA sequence
Length = 160
Score = 50.1 bits (25), Expect = 5e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1407 acatcgtcatcccatcggaccatcaaacatttccatttcgaacca 1451
||||| |||||||||| |||| |||||||||||| |||||||||
Sbjct: 160 acatcatcatcccatctcaccaccaaacatttccacttcgaacca 116
>gb|BQ620834.1|BQ620834 TaLr1104D08R TaLr1 Triticum aestivum cDNA clone TaLr1104D08R, mRNA
sequence
Length = 438
Score = 50.1 bits (25), Expect = 5e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1200 aattcttgaccttgcaagaccttgtggaa 1228
||||||||||||||||||||| |||||||
Sbjct: 295 aattcttgaccttgcaagaccctgtggaa 267
>gb|AL821805.1|AL821805 AL821805 N:130 Triticum aestivum cDNA clone B06_N130_plate_63, mRNA
sequence
Length = 572
Score = 50.1 bits (25), Expect = 5e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1200 aattcttgaccttgcaagaccttgtggaa 1228
||||||||||||||||||||| |||||||
Sbjct: 107 aattcttgaccttgcaagaccctgtggaa 79
>gb|CA502175.1|CA502175 WHE4043_G07_N13ZT Wheat meiotic anther cDNA library Triticum aestivum
cDNA clone WHE4043_G07_N13, mRNA sequence
Length = 777
Score = 50.1 bits (25), Expect = 5e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1200 aattcttgaccttgcaagaccttgtggaa 1228
||||||||||||||||||||| |||||||
Sbjct: 468 aattcttgaccttgcaagaccctgtggaa 440
>gb|CD918964.1|CD918964 G608.111I19F010911 G608 Triticum aestivum cDNA clone G608111I19, mRNA
sequence
Length = 672
Score = 50.1 bits (25), Expect = 5e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1200 aattcttgaccttgcaagaccttgtggaa 1228
||||||||||||||||||||| |||||||
Sbjct: 305 aattcttgaccttgcaagaccctgtggaa 277
>gb|CB307104.1|CB307104 HFIG089 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 698
Score = 50.1 bits (25), Expect = 5e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1200 aattcttgaccttgcaagaccttgtggaa 1228
||||||||||||||||||||| |||||||
Sbjct: 430 aattcttgaccttgcaagaccctgtggaa 402
>gb|BE442731.1|BE442731 WHE1105_D08_G15ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1105_D08_G15,
mRNA sequence
Length = 551
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 970 cttcttgaccttgcaagacctttt 993
||||||||||||||||||||||||
Sbjct: 136 cttcttgaccttgcaagacctttt 159
Score = 42.1 bits (21), Expect = 0.13
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1202 ttcttgaccttgcaagacctt 1222
|||||||||||||||||||||
Sbjct: 137 ttcttgaccttgcaagacctt 157
>gb|CD452471.1|CD452471 WHE1105_D08_G15ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1105_D08_G15,
mRNA sequence
Length = 511
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 970 cttcttgaccttgcaagacctttt 993
||||||||||||||||||||||||
Sbjct: 461 cttcttgaccttgcaagacctttt 438
Score = 42.1 bits (21), Expect = 0.13
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1202 ttcttgaccttgcaagacctt 1222
|||||||||||||||||||||
Sbjct: 460 ttcttgaccttgcaagacctt 440
>gb|CK156495.1|CK156495 FGAS037431 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 912
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 970 cttcttgaccttgcaagacctttt 993
||||||||||||||||||||||||
Sbjct: 322 cttcttgaccttgcaagacctttt 345
Score = 42.1 bits (21), Expect = 0.13
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1202 ttcttgaccttgcaagacctt 1222
|||||||||||||||||||||
Sbjct: 323 ttcttgaccttgcaagacctt 343
>gb|CN010916.1|CN010916 WHE3877_F12_L23ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3877_F12_L23,
mRNA sequence
Length = 758
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 970 cttcttgaccttgcaagacctttt 993
||||||||||||||||||||||||
Sbjct: 432 cttcttgaccttgcaagacctttt 455
Score = 42.1 bits (21), Expect = 0.13
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1202 ttcttgaccttgcaagacctt 1222
|||||||||||||||||||||
Sbjct: 433 ttcttgaccttgcaagacctt 453
>gb|AL809244.1|AL809244 AL809244 a:11 Triticum aestivum cDNA clone B02_a11_plate_15, mRNA
sequence
Length = 540
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 970 cttcttgaccttgcaagacctttt 993
||||||||||||||||||||||||
Sbjct: 398 cttcttgaccttgcaagacctttt 421
Score = 42.1 bits (21), Expect = 0.13
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1202 ttcttgaccttgcaagacctt 1222
|||||||||||||||||||||
Sbjct: 399 ttcttgaccttgcaagacctt 419
>gb|AY376130.1| Triticum aestivum ETTIN-like auxin response factor (ETT-L alpha)
mRNA, partial cds
Length = 2015
Score = 48.1 bits (24), Expect = 0.002
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1181 atgagttctataacccagtaattcttgaccttgcaagacc 1220
|||||||| | |||||| |||||||||||||||||||||
Sbjct: 903 atgagttccagaacccatcaattcttgaccttgcaagacc 864
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 969 acttcttgaccttgcaagacct 990
||||||||||||||||||||||
Sbjct: 1103 acttcttgaccttgcaagacct 1082
>gb|BE443666.1|BE443666 WHE1121_F08_K15ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1121_F08_K15,
mRNA sequence
Length = 503
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 969 acttcttgaccttgcaagacct 990
||||||||||||||||||||||
Sbjct: 158 acttcttgaccttgcaagacct 137
>gb|BE444190.1|BE444190 WHE1128_C06_F12ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1128_C06_F12,
mRNA sequence
Length = 462
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 969 acttcttgaccttgcaagacct 990
||||||||||||||||||||||
Sbjct: 145 acttcttgaccttgcaagacct 124
>gb|CA727373.1|CA727373 wdi1c.pk001.k15 wdi1c Triticum aestivum cDNA clone wdi1c.pk001.k15
5' end, mRNA sequence
Length = 403
Score = 44.1 bits (22), Expect = 0.033
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 969 acttcttgaccttgcaagacct 990
||||||||||||||||||||||
Sbjct: 90 acttcttgaccttgcaagacct 69
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 317,705
Number of Sequences: 636343
Number of extensions: 317705
Number of successful extensions: 82714
Number of sequences better than 0.5: 24
Number of HSP's better than 0.5 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82611
Number of HSP's gapped (non-prelim): 99
length of query: 1796
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1776
effective length of database: 354,513,379
effective search space: 629615761104
effective search space used: 629615761104
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)