BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440806.2.1
(1136 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL810355.1|AL810355 AL810355 e:29 Triticum aestivum cDNA... 289 2e-076
gb|CV769347.1|CV769347 FGAS063738 Triticum aestivum FGAS: L... 176 2e-042
gb|CV769371.1|CV769371 FGAS063762 Triticum aestivum FGAS: L... 176 2e-042
gb|CK161286.1|CK161286 FGAS013852 Triticum aestivum FGAS: L... 172 3e-041
gb|BJ245701.1|BJ245701 BJ245701 Y. Ogihara unpublished cDNA... 163 3e-038
gb|BJ247566.1|BJ247566 BJ247566 Y. Ogihara unpublished cDNA... 153 3e-035
gb|BQ903526.1|BQ903526 Ta03_15d09_R Ta03_AAFC_ECORC_Fusariu... 139 5e-031
gb|BG908231.1|BG908231 TaLr1166E12F TaLr1 Triticum aestivum... 101 1e-019
gb|BG910075.1|BG910075 TaLr1144C05W TaLr1 Triticum aestivum... 101 1e-019
gb|CD905471.1|CD905471 G468.101P12F010807 G468 Triticum aes... 101 1e-019
gb|CD905472.1|CD905472 G468.101P12R010928 G468 Triticum aes... 101 1e-019
gb|AY029159.1| Triticum aestivum sucrose-6F-phosphate phosp... 101 1e-019
gb|BE444854.1|BE444854 WHE1129_A07_A13ZS Wheat etiolated se... 100 4e-019
gb|CD452800.1|CD452800 WHE1129_A07_A13ZT CS wheat etiolated... 100 4e-019
gb|CD897530.1|CD897530 G174.106D09F010823 G174 Triticum aes... 100 4e-019
gb|AF321556.1|AF321556 Triticum aestivum sucrose-6F-phospha... 100 4e-019
gb|CK192996.1|CK192996 FGAS001404 Triticum aestivum FGAS: L... 98 2e-018
gb|CD884059.1|CD884059 F1.115F19F010507 F1 Triticum aestivu... 94 3e-017
gb|BG607301.1|BG607301 WHE2493_H01_P01ZS Triticum monococcu... 92 1e-016
gb|BJ221667.1|BJ221667 BJ221667 Y. Ogihara unpublished cDNA... 88 2e-015
gb|CD453621.1|CD453621 WHE0821-0824_H15_H15ZT CS wheat vern... 88 2e-015
gb|BE445001.1|BE445001 WHE1130_D03_G06ZS Wheat etiolated se... 82 1e-013
gb|BG904868.1|BG904868 TaLr1135E01F TaLr1 Triticum aestivum... 82 1e-013
gb|BJ229116.1|BJ229116 BJ229116 Y. Ogihara unpublished cDNA... 82 1e-013
gb|BJ252736.1|BJ252736 BJ252736 Y. Ogihara unpublished cDNA... 82 1e-013
gb|CD882942.1|CD882942 F1.111M01F010430 F1 Triticum aestivu... 82 1e-013
gb|AF321557.1|AF321557 Triticum aestivum sucrose-6F-phospha... 82 1e-013
gb|BF484839.1|BF484839 WHE2320_C04_F08ZS Wheat pre-anthesis... 70 4e-010
gb|CV778342.1|CV778342 FGAS072750 Triticum aestivum FGAS: L... 70 4e-010
gb|AL809287.1|AL809287 AL809287 a:11 Triticum aestivum cDNA... 68 1e-009
gb|AL812363.1|AL812363 AL812363 e:310 Triticum aestivum cDN... 64 2e-008
gb|BJ208137.1|BJ208137 BJ208137 Y. Ogihara unpublished cDNA... 56 5e-006
gb|BJ267963.1|BJ267963 BJ267963 Y. Ogihara unpublished cDNA... 56 5e-006
gb|CA728781.1|CA728781 wdi1c.pk005.m2 wdi1c Triticum aestiv... 56 5e-006
gb|CD898293.1|CD898293 G174.108K23F010821 G174 Triticum aes... 56 5e-006
gb|CD938589.1|CD938589 OV.110G14F010312 OV Triticum aestivu... 56 5e-006
gb|AL812716.1|AL812716 AL812716 e:310 Triticum aestivum cDN... 54 2e-005
gb|CN012372.1|CN012372 WHE3895_H08_O15ZS Wheat Fusarium gra... 50 3e-004
gb|BI480017.1|BI480017 WHE3453_G02_N03ZS Wheat pre-anthesis... 42 0.083
>gb|AL810355.1|AL810355 AL810355 e:29 Triticum aestivum cDNA clone D07_e29_plate_1, mRNA
sequence
Length = 688
Score = 289 bits (146), Expect = 2e-076
Identities = 274/317 (86%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |||||
Sbjct: 675 cggttcccctggctgatgatggtggggtcccggttgccgccgatggcgtacatctgccag 616
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 615 tgcgtgtagtcgttgttcaccacctggaagaagccgaagcggcagcggggcatccgctgc 556
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggac 748
|||||||||||||||||||||||||| || ||||||||||||||| |||||||| |
Sbjct: 555 accagccccttgccgaagtggttgaacgccacggtgacctgcatcatcctgtcctgctcc 496
Query: 749 gcggcgtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggag 808
| | || || || ||||||||||| |||||||| ||| | |||||||||| ||||||
Sbjct: 495 tccgtgttgcnagcgccgaacagcatcacgtggtcatgcttggtgaagtggctgttggac 436
Query: 809 acggtgatggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatg 868
||||||||||||||||||||| ||| |||| | || ||||| ||||||||| ||||
Sbjct: 435 acggtgatggcggtggagccgctgaccacgtcgatgaggccgtcggcgcagctggacatg 376
Query: 869 gacaggtggtcgatcca 885
|||| ||||||||||||
Sbjct: 375 gacacgtggtcgatcca 359
Score = 115 bits (58), Expect = 7e-024
Identities = 148/178 (83%)
Strand = Plus / Minus
Query: 945 agtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcgtggacgtgca 1004
||||||||| |||||||||||| |||||| ||||| | ||| || ||||| ||| |
Sbjct: 299 agtggtgcttggagtcccggatcatgccgcccgagtgcggcacggagtggtggatgtgga 240
Query: 1005 ggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgcccacgatgtgca 1064
|||||||| |||||||| | |||| ||||||||| ||||| || ||| ||||||||
Sbjct: 239 cgttgtggatgatcacgtgcctcacgccctgcagcgtcatctgtgcccccgtgatgtgca 180
Query: 1065 cctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcctggcagag 1122
||||||| |||||||||||||| ||||||| |||| ||||||||||||||||| ||||
Sbjct: 179 cctgcgcgccgcgcccgtcgatcgtcttgttgctgttcacgatgagctcctgggagag 122
>gb|CV769347.1|CV769347 FGAS063738 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 864
Score = 176 bits (89), Expect = 2e-042
Identities = 155/177 (87%)
Strand = Plus / Minus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||| |||||||||| ||||||||| | |||||| |||||||||||||||||||
Sbjct: 294 agcggttcccctggctgaggatggtgggcgcgctgctgcctccgatggcgtacatgagcc 235
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
||| |||||||||||||| || |||||||||||||||| |||||||| ||||||| ||
Sbjct: 234 agttggtgtagtcgttgttgacgacgtggaagaagccgtagcggcagcgaggcatcctct 175
Query: 687 gcaccagccccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtcct 743
||||||| || | ||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 174 gcaccaggcctctcccgaagtggttgaaggcgacggtgacctgcatcaccttgtcct 118
>gb|CV769371.1|CV769371 FGAS063762 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 176 bits (89), Expect = 2e-042
Identities = 155/177 (87%)
Strand = Plus / Minus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||| |||||||||| ||||||||| | |||||| |||||||||||||||||||
Sbjct: 292 agcggttcccctggctgaggatggtgggcgcgctgctgcctccgatggcgtacatgagcc 233
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
||| |||||||||||||| || |||||||||||||||| |||||||| ||||||| ||
Sbjct: 232 agttggtgtagtcgttgttgacgacgtggaagaagccgtagcggcagcgaggcatcctct 173
Query: 687 gcaccagccccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtcct 743
||||||| || | ||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 172 gcaccaggcctctcccgaagtggttgaaggcgacggtgacctgcatcaccttgtcct 116
>gb|CK161286.1|CK161286 FGAS013852 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 899
Score = 172 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
||||| |||||||||| ||||||||| | |||||| |||||||||||||||||||||
Sbjct: 286 cggttcccctggctgacgatggtgggcgcgctgctgcctccgatggcgtacatgagccag 227
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
| |||||||||||||| || |||||||||||||||| |||||||| ||||||| ||||
Sbjct: 226 ttggtgtagtcgttgttgacgacgtggaagaagccgtagcggcagcgaggcatcctctgc 167
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtcct 743
||||| || | ||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 166 accaggcctctcccgaagtggttgaaggcgacggtgacctgcatcaccttgtcct 112
>gb|BJ245701.1|BJ245701 BJ245701 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf1m10 5', mRNA sequence
Length = 614
Score = 163 bits (82), Expect = 3e-038
Identities = 145/166 (87%)
Strand = Plus / Minus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 218 agcggttcccctggctgatgatggtcgggttcttgctgccgccgatggcgtacatgagcc 159
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
|||| ||||||||||||||||||||||||||||| || ||||| | ||||| | ||
Sbjct: 158 agtgggtgtagtcgttgttcaccacgtggaagaatccccatcggcaccttggcattctct 99
Query: 687 gcaccagccccttgccgaagtggttgaaggcgacggtgacctgcat 732
|||| || || | ||||||||||||||||||||||||| ||||||
Sbjct: 98 gcacgaggcctcttccgaagtggttgaaggcgacggtgatctgcat 53
>gb|BJ247566.1|BJ247566 BJ247566 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2m10 5', mRNA sequence
Length = 453
Score = 153 bits (77), Expect = 3e-035
Identities = 142/164 (86%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 192 cggttcccctggctnatgatggtcgggttcttgctgccgccgatggcgtacatgagccag 133
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
|| ||||||||||||||||||||||||||||| || ||||| | ||||| | ||||
Sbjct: 132 tgggtgtagtcgttgttcaccacgtggaagaatccccatcggcaccttggcattctctgc 73
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcat 732
|| || || | ||||||||||||||||||||||||| ||||||
Sbjct: 72 acgaggcctcttccgaagtggttgaaggcgacggtgatctgcat 29
>gb|BQ903526.1|BQ903526 Ta03_15d09_R
Ta03_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta03_15d09, mRNA
sequence
Length = 367
Score = 139 bits (70), Expect = 5e-031
Identities = 111/126 (88%)
Strand = Plus / Plus
Query: 618 acatgagccagtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcg 677
|||||||||||| |||||| ||||||| || |||||||||||||||| ||||||| |
Sbjct: 1 acatgagccagtyggtgtagycgttgttgacgacgtggaagaagccgtagcggcagcrwg 60
Query: 678 gcatccgctgcaccagccccttgccgaagtggttgaaggcgacggtgacctgcatctccc 737
|||||| ||||||||| ||| | ||||||||||||||||||||||||||||||||| ||
Sbjct: 61 gcatcctctgcaccaggcccctcccgaagtggttgaaggcgacggtgacctgcatcacct 120
Query: 738 tgtcct 743
||||||
Sbjct: 121 tgtcct 126
>gb|BG908231.1|BG908231 TaLr1166E12F TaLr1 Triticum aestivum cDNA clone TaLr1166E12 3',
mRNA sequence
Length = 615
Score = 101 bits (51), Expect = 1e-019
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |
Sbjct: 402 agtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagc 461
Query: 113 gcatcaatggatgcatgga 131
|||||||||||| |||||
Sbjct: 462 tcatcaatggatgaatgga 480
>gb|BG910075.1|BG910075 TaLr1144C05W TaLr1 Triticum aestivum cDNA clone TaLr1144C05 3',
mRNA sequence
Length = 580
Score = 101 bits (51), Expect = 1e-019
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |
Sbjct: 326 agtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagc 385
Query: 113 gcatcaatggatgcatgga 131
|||||||||||| |||||
Sbjct: 386 tcatcaatggatgaatgga 404
>gb|CD905471.1|CD905471 G468.101P12F010807 G468 Triticum aestivum cDNA clone G468101P12,
mRNA sequence
Length = 582
Score = 101 bits (51), Expect = 1e-019
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |
Sbjct: 403 agtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagc 344
Query: 113 gcatcaatggatgcatgga 131
|||||||||||| |||||
Sbjct: 343 tcatcaatggatgaatgga 325
>gb|CD905472.1|CD905472 G468.101P12R010928 G468 Triticum aestivum cDNA clone G468101P12,
mRNA sequence
Length = 697
Score = 101 bits (51), Expect = 1e-019
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |
Sbjct: 402 agtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagc 461
Query: 113 gcatcaatggatgcatgga 131
|||||||||||| |||||
Sbjct: 462 tcatcaatggatgaatgga 480
>gb|AY029159.1| Triticum aestivum sucrose-6F-phosphate phosphohydrolase SPP3 mRNA,
complete cds
Length = 1743
Score = 101 bits (51), Expect = 1e-019
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |
Sbjct: 1192 agtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagc 1133
Query: 113 gcatcaatggatgcatgga 131
|||||||||||| |||||
Sbjct: 1132 tcatcaatggatgaatgga 1114
>gb|BE444854.1|BE444854 WHE1129_A07_A13ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1129_A07_A13,
mRNA sequence
Length = 513
Score = 99.6 bits (50), Expect = 4e-019
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 46 gataaaaagtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 401 gataacaagtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatga 342
Query: 106 tcccaacgcatcaatgga 123
||| | ||||||||||
Sbjct: 341 agccagctcatcaatgga 324
>gb|CD452800.1|CD452800 WHE1129_A07_A13ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1129_A07_A13,
mRNA sequence
Length = 692
Score = 99.6 bits (50), Expect = 4e-019
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 46 gataaaaagtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 493 gataacaagtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatga 552
Query: 106 tcccaacgcatcaatgga 123
||| | ||||||||||
Sbjct: 553 agccagctcatcaatgga 570
>gb|CD897530.1|CD897530 G174.106D09F010823 G174 Triticum aestivum cDNA clone G174106D09,
mRNA sequence
Length = 582
Score = 99.6 bits (50), Expect = 4e-019
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 46 gataaaaagtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 195 gataacaagtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatga 136
Query: 106 tcccaacgcatcaatgga 123
||| | ||||||||||
Sbjct: 135 agccagctcatcaatgga 118
>gb|AF321556.1|AF321556 Triticum aestivum sucrose-6F-phosphate phosphohydrolase SPP1 mRNA,
complete cds
Length = 1700
Score = 99.6 bits (50), Expect = 4e-019
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 46 gataaaaagtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 1241 gataacaagtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatga 1182
Query: 106 tcccaacgcatcaatgga 123
||| | ||||||||||
Sbjct: 1181 agccagctcatcaatgga 1164
>gb|CK192996.1|CK192996 FGAS001404 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 848
Score = 97.6 bits (49), Expect = 2e-018
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |
Sbjct: 521 agtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagc 580
Query: 113 gcatcaatggatg 125
||||||||||||
Sbjct: 581 tcatcaatggatg 593
>gb|CD884059.1|CD884059 F1.115F19F010507 F1 Triticum aestivum cDNA clone F1115F19, mRNA
sequence
Length = 598
Score = 93.7 bits (47), Expect = 3e-017
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 51 aaagtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
|||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 539 aaagtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatga 485
>gb|BG607301.1|BG607301 WHE2493_H01_P01ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2493_H01_P01,
mRNA sequence
Length = 633
Score = 91.7 bits (46), Expect = 1e-016
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
|||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |
Sbjct: 264 agtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagc 205
Query: 113 gcatcaatgg 122
|||||||||
Sbjct: 204 tcatcaatgg 195
>gb|BJ221667.1|BJ221667 BJ221667 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26d08 3', mRNA sequence
Length = 620
Score = 87.7 bits (44), Expect = 2e-015
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 48 taaaaagtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatc 107
||||||||| |||||||||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 352 taaaaagtcggtccacccatgctcggaacttttggccttgtttgtcaccatagcatgaac 411
Query: 108 ccaacgcatcaatggatgcatggagtga 135
|| ||||||||||||||||| |||||
Sbjct: 412 tcagtgcatcaatggatgcatgaagtga 439
>gb|CD453621.1|CD453621 WHE0821-0824_H15_H15ZT CS wheat vernalized crown cDNA library
Triticum aestivum cDNA clone WHE0821-0824_H15_H15, mRNA
sequence
Length = 677
Score = 87.7 bits (44), Expect = 2e-015
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 48 taaaaagtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatc 107
||||||||| |||||||||||||||| ||||| |||||||||||| |||||||||| |
Sbjct: 408 taaaaagtcggtccacccatgctcggaacttttggccttgtttgtcagcataacatgaac 467
Query: 108 ccaacgcatcaatggatgcatggagtga 135
|| ||||||||||||||||| |||||
Sbjct: 468 tcagtgcatcaatggatgcatgaagtga 495
>gb|BE445001.1|BE445001 WHE1130_D03_G06ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1130_D03_G06,
mRNA sequence
Length = 585
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
|||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 306 agtctgtccacccatgaccggtactttttcccttgtttgtcaccataacatga 254
>gb|BG904868.1|BG904868 TaLr1135E01F TaLr1 Triticum aestivum cDNA clone TaLr1135E01 3',
mRNA sequence
Length = 581
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
|||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 459 agtctgtccacccatgaccggtactttttcccttgtttgtcaccataacatga 511
>gb|BJ229116.1|BJ229116 BJ229116 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl9n22 3', mRNA sequence
Length = 471
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
|||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 389 agtctgtccacccatgaccggtactttttcccttgtttgtcaccataacatga 441
>gb|BJ252736.1|BJ252736 BJ252736 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf25l09 3', mRNA sequence
Length = 687
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
|||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 429 agtctgtccacccatgaccggtactttttcccttgtttgtcaccataacatga 481
>gb|CD882942.1|CD882942 F1.111M01F010430 F1 Triticum aestivum cDNA clone F1111M01, mRNA
sequence
Length = 557
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
|||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 118 agtctgtccacccatgaccggtactttttcccttgtttgtcaccataacatga 66
>gb|AF321557.1|AF321557 Triticum aestivum sucrose-6F-phosphate phosphohydrolase SPP2 mRNA,
complete cds
Length = 1665
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatga 105
|||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 1199 agtctgtccacccatgaccggtactttttcccttgtttgtcaccataacatga 1147
>gb|BF484839.1|BF484839 WHE2320_C04_F08ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2320_C04_F08, mRNA sequence
Length = 368
Score = 69.9 bits (35), Expect = 4e-010
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 1060 gtgcacctgcgctccgcgcccgtcgatggtcttgtcgct 1098
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 72 gtgcacctgcgccccgcgcccgtcgatggtcttgtcgct 34
>gb|CV778342.1|CV778342 FGAS072750 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 829
Score = 69.9 bits (35), Expect = 4e-010
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 1060 gtgcacctgcgctccgcgcccgtcgatggtcttgtcgct 1098
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 716 gtgcacctgcgccccgcgcccgtcgatggtcttgtcgct 678
>gb|AL809287.1|AL809287 AL809287 a:11 Triticum aestivum cDNA clone B01_a11_plate_16, mRNA
sequence
Length = 240
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1073 ccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcctggc 1118
||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 240 ccgcgcccgtcgatggtcttgaagctgttcacgatgagctcctggc 195
>gb|AL812363.1|AL812363 AL812363 e:310 Triticum aestivum cDNA clone A04_e310_plate_3, mRNA
sequence
Length = 529
Score = 63.9 bits (32), Expect = 2e-008
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||| ||||||||| ||||||| || | ||| || |||||||||||||| ||
Sbjct: 414 agcggttcccctggctgttgatggtcggctcggcgctccctccgatggcgtacatctccc 355
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaag 658
|||| |||||||| ||||||||||||||||||
Sbjct: 354 agtgggtgtagtcattgttcaccacgtggaag 323
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 802 gttggagacggtgatggcggtggagcc 828
||||||||| |||||||||||||||||
Sbjct: 179 gttggagacagtgatggcggtggagcc 153
>gb|BJ208137.1|BJ208137 BJ208137 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh6p12 5', mRNA sequence
Length = 585
Score = 56.0 bits (28), Expect = 5e-006
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||| ||||||||| ||||||| || | ||| || |||||||||||||| ||
Sbjct: 417 agcggttcccctggctgttgatggtcggctcggcgctccctccgatggcgtacatctccc 358
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaag 658
|||| |||||||| ||||||||||| ||||||
Sbjct: 357 agtgggtgtagtcattgttcaccacatggaag 326
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 802 gttggagacggtgatggcggtggagcc 828
||||||||| |||||||||||||||||
Sbjct: 182 gttggagacagtgatggcggtggagcc 156
>gb|BJ267963.1|BJ267963 BJ267963 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh14e12 5', mRNA sequence
Length = 654
Score = 56.0 bits (28), Expect = 5e-006
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||| ||||||||| ||||||| || | ||| || |||||||||||||| ||
Sbjct: 121 agcggttcccctggctgttgatggtcggctcggcgctccctccgatggcgtacatctccc 62
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaag 658
|||| |||||||| ||||||||||| ||||||
Sbjct: 61 agtgggtgtagtcattgttcaccacatggaag 30
>gb|CA728781.1|CA728781 wdi1c.pk005.m2 wdi1c Triticum aestivum cDNA clone wdi1c.pk005.m2 5'
end, mRNA sequence
Length = 589
Score = 56.0 bits (28), Expect = 5e-006
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||| ||||||||| ||||||| || | ||| || |||||||||||||| ||
Sbjct: 119 agcggttcccctggctgttgatggtcggctcggcgctccctccgatggcgtacatctccc 60
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaag 658
|||| |||||||| ||||||||||| ||||||
Sbjct: 59 agtgggtgtagtcattgttcaccacatggaag 28
>gb|CD898293.1|CD898293 G174.108K23F010821 G174 Triticum aestivum cDNA clone G174108K23,
mRNA sequence
Length = 734
Score = 56.0 bits (28), Expect = 5e-006
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||| ||||||||| ||||||| || | ||| || |||||||||||||| ||
Sbjct: 295 agcggttcccctggctgttgatggtcggctcggcgctccctccgatggcgtacatctccc 236
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaag 658
|||| |||||||| ||||||||||| ||||||
Sbjct: 235 agtgggtgtagtcattgttcaccacatggaag 204
>gb|CD938589.1|CD938589 OV.110G14F010312 OV Triticum aestivum cDNA clone OV110G14, mRNA
sequence
Length = 708
Score = 56.0 bits (28), Expect = 5e-006
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||| ||||||||| ||||||| || | ||| || |||||||||||||| ||
Sbjct: 485 agcggttcccctggctgttgatggtcggctcggcgctccctccgatggcgtacatctccc 426
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaag 658
|||| |||||||| ||||||||||| ||||||
Sbjct: 425 agtgggtgtagtcattgttcaccacatggaag 394
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 802 gttggagacggtgatggcggtggagcc 828
||||||||| |||||||||||||||||
Sbjct: 250 gttggagacagtgatggcggtggagcc 224
>gb|AL812716.1|AL812716 AL812716 e:310 Triticum aestivum cDNA clone H11_e310_plate_7, mRNA
sequence
Length = 540
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 608 ccgatggcgtacatgagccagtgcgtgtagtcgttgttcaccacgtggaag 658
|||||||||||||| |||||| |||||||| ||||||| ||||||||||
Sbjct: 379 ccgatggcgtacatctcccagtgggtgtagtcattgttcagcacgtggaag 329
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 802 gttggagacggtgatggcggtggagcc 828
||||||||| |||||||||||||||||
Sbjct: 184 gttggagacagtgatggcggtggagcc 158
>gb|CN012372.1|CN012372 WHE3895_H08_O15ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3895_H08_O15,
mRNA sequence
Length = 509
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 46 gataaaaagtctgtccacccatgctcggtactttctccctt 86
||||| ||||||||||||||||| |||| ||||| ||||||
Sbjct: 469 gataacaagtctgtccacccatgatcgggactttttccctt 509
>gb|BI480017.1|BI480017 WHE3453_G02_N03ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3453_G02_N03, mRNA sequence
Length = 497
Score = 42.1 bits (21), Expect = 0.083
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 967 cgcgccgccgccgtgcgccgc 987
|||||||||||||||||||||
Sbjct: 133 cgcgccgccgccgtgcgccgc 113
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 377,725
Number of Sequences: 636343
Number of extensions: 377725
Number of successful extensions: 103938
Number of sequences better than 0.5: 40
Number of HSP's better than 0.5 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103850
Number of HSP's gapped (non-prelim): 87
length of query: 1136
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1116
effective length of database: 354,513,379
effective search space: 395636930964
effective search space used: 395636930964
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)