BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440716.2.1
(774 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ752889.1|BQ752889 WHE4120_D01_H02ZS Wheat salt-stresse... 192 2e-047
gb|BQ483975.1|BQ483975 WHE3515_A05_B09ZS Wheat unstressed r... 190 1e-046
gb|BG313174.1|BG313174 WHE2054_F07_L14ZS Wheat salt-stresse... 188 4e-046
gb|BE425760.1|BE425760 WHE0316_C11_C11ZS Wheat unstressed s... 184 6e-045
gb|CA700350.1|CA700350 wkm1c.pk005.e20 wkm1c Triticum aesti... 167 1e-039
gb|CV765720.1|CV765720 FGAS060107 Triticum aestivum FGAS: L... 163 2e-038
gb|CD915387.1|CD915387 G550.125P10F010713 G550 Triticum aes... 149 3e-034
gb|CA721277.1|CA721277 wdk9n.pk001.e20 wdk9n Triticum aesti... 141 8e-032
gb|CD453688.1|CD453688 WHE0840_E04_J08ZT CS wheat vernalize... 141 8e-032
gb|CA624642.1|CA624642 wl1n.pk0121.g11 wl1n Triticum aestiv... 111 7e-023
gb|BE490447.1|BE490447 WHE0367_C11_E21ZS Wheat cold-stresse... 107 1e-021
gb|BE406114.1|BE406114 WHE0404_c07_c07zB Wheat etiolated se... 105 4e-021
gb|BJ281677.1|BJ281677 BJ281677 Y. Ogihara unpublished cDNA... 105 4e-021
gb|BQ578302.1|BQ578302 WHE0301_D03_G05ZS Wheat unstressed s... 105 4e-021
gb|CD373574.1|CD373574 WHE0425_A04_A07ZT CS wheat etiolated... 105 4e-021
gb|BF474053.1|BF474053 WHE0840_E04_J08ZS Wheat vernalized c... 103 2e-020
gb|CD865781.1|CD865781 AZO2.101M06F001124 AZO2 Triticum aes... 103 2e-020
gb|CD867745.1|CD867745 AZO2.107B06R010328 AZO2 Triticum aes... 98 1e-018
gb|CK193504.1|CK193504 FGAS001918 Triticum aestivum FGAS: L... 98 1e-018
gb|BE405606.1|BE405606 WHE1209_C09_E17ZS Wheat etiolated se... 92 7e-017
gb|BQ743938.1|BQ743938 WHE4109_H10_O19ZS Wheat salt-stresse... 92 7e-017
gb|CA615835.1|CA615835 wr1.pk169.d2 wr1 Triticum aestivum c... 92 7e-017
gb|CA615942.1|CA615942 wr1.pk166.f6 wr1 Triticum aestivum c... 74 2e-011
gb|CA604693.1|CA604693 wr1.pk0043.b10 wr1 Triticum aestivum... 72 6e-011
gb|BE415485.1|BE415485 MWL031.D01000324 ITEC MWL Wheat Root... 70 2e-010
gb|CA719313.1|CA719313 wkm2n.pk003.k18 wkm2n Triticum aesti... 70 2e-010
gb|CA630327.1|CA630327 wle1n.pk0032.d11 wle1n Triticum aest... 68 1e-009
gb|AJ614016.1|AJ614016 AJ614016 Triticum turgidum subsp. du... 64 2e-008
gb|BE405326.1|BE405326 WHE1213_A08_A15ZS Wheat etiolated se... 62 6e-008
gb|BE405850.1|BE405850 WHE0425_A04_A07ZS Wheat etiolated se... 62 6e-008
gb|BI480519.1|BI480519 WHE2904_C05_F10ZS Wheat aluminum-str... 62 6e-008
gb|CA719066.1|CA719066 wkm2n.pk003.n22 wkm2n Triticum aesti... 62 6e-008
gb|CA720605.1|CA720605 wkm2n.pk007.f4 wkm2n Triticum aestiv... 62 6e-008
gb|CD867744.1|CD867744 AZO2.107B06F001113 AZO2 Triticum aes... 62 6e-008
gb|CA604032.1|CA604032 wr1.pk0033.e10 wr1 Triticum aestivum... 60 2e-007
gb|CA633057.1|CA633057 wle1n.pk0065.f6 wle1n Triticum aesti... 60 2e-007
gb|BI480329.1|BI480329 WHE2901_G07_M13ZS Wheat aluminum-str... 56 4e-006
gb|CA615191.1|CA615191 wr1.pk178.a6 wr1 Triticum aestivum c... 56 4e-006
gb|CA636643.1|CA636643 wle1n.pk0111.c6 wle1n Triticum aesti... 52 6e-005
gb|CK195337.1|CK195337 FGAS003776 Triticum aestivum FGAS: L... 52 6e-005
gb|BJ295748.1|BJ295748 BJ295748 Y. Ogihara unpublished cDNA... 50 2e-004
gb|CA720937.1|CA720937 wkm2n.pk008.h12 wkm2n Triticum aesti... 50 2e-004
gb|BU101240.1|BU101240 WHE3366_E07_J14ZS Chinese Spring alu... 46 0.004
gb|BE516604.1|BE516604 WHE0630_B10_C20ZA Wheat ABA-treated ... 44 0.014
gb|BJ289424.1|BJ289424 BJ289424 Y. Ogihara unpublished cDNA... 44 0.014
gb|BQ753201.1|BQ753201 WHE4124_C05_F10ZS Wheat salt-stresse... 44 0.014
gb|CA604775.1|CA604775 wr1.pk0039.h4 wr1 Triticum aestivum ... 44 0.014
gb|BQ837969.1|BQ837969 WHE2905_A11_A21ZS Wheat aluminum-str... 42 0.056
gb|CK217334.1|CK217334 FGAS029336 Triticum aestivum FGAS: L... 42 0.056
gb|BE471248.1|BE471248 WHE0286_A01_B02ZS Wheat drought-stre... 40 0.22
gb|BJ244112.1|BJ244112 BJ244112 Y. Ogihara unpublished cDNA... 40 0.22
gb|BJ246291.1|BJ246291 BJ246291 Y. Ogihara unpublished cDNA... 40 0.22
gb|AL827222.1|AL827222 AL827222 p:638 Triticum aestivum cDN... 40 0.22
gb|CA648669.1|CA648669 wre1n.pk0124.b2 wre1n Triticum aesti... 40 0.22
gb|CA732218.1|CA732218 wlp1c.pk003.g17 wlp1c Triticum aesti... 40 0.22
gb|CD873804.1|CD873804 AZO3.100L13F010925 AZO3 Triticum aes... 40 0.22
gb|CD886400.1|CD886400 G118.102D10F010605 G118 Triticum aes... 40 0.22
gb|CD930078.1|CD930078 GR45.110B08F010418 GR45 Triticum aes... 40 0.22
gb|CK163299.1|CK163299 FGAS015921 Triticum aestivum FGAS: L... 40 0.22
gb|CK199900.1|CK199900 FGAS008407 Triticum aestivum FGAS: L... 40 0.22
gb|CV763205.1|CV763205 FGAS057594 Triticum aestivum FGAS: L... 40 0.22
gb|CV767796.1|CV767796 FGAS062187 Triticum aestivum FGAS: L... 40 0.22
gb|DR740154.1|DR740154 FGAS085082 Triticum aestivum FGAS: L... 40 0.22
>gb|BQ752889.1|BQ752889 WHE4120_D01_H02ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4120_D01_H02, mRNA sequence
Length = 754
Score = 192 bits (97), Expect = 2e-047
Identities = 219/260 (84%)
Strand = Plus / Minus
Query: 495 gcccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcgg 554
|||||||||||| |||||| ||||||||| ||||||| ||||||| |||||| ||||
Sbjct: 552 gcccaccttccatacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgg 493
Query: 555 gcagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtg 614
| ||||| ||| ||||||||||||||||| ||||| || || |||||||| ||| ||||
Sbjct: 492 gtggcagatcatcggcacgccctccgagatcgcctccaccgtcgagttccagccgctgtg 433
Query: 615 ggtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgac 674
|||| ||| |||| || ||||||||||| |||||||||||||||||||||||| | ||
Sbjct: 432 cgtgaagaaggcgcccaccgccgggtgcgccagcacctcctcctgcggcgcccagctcac 373
Query: 675 gacgatnccgcggccgcgcacctcgtcctccaccccgtcgggcagcgcgccggactcgaa 734
|| | ||||| ||||||| ||| ||| | | ||||||||||||| |||||||||||||
Sbjct: 372 gatcttgccgcgcccgcgcagctcctccccgagcccgtcgggcagctcgccggactcgaa 313
Query: 735 gccgcggatgagattgggcc 754
||||||||||| |||||||
Sbjct: 312 cccgcggatgagcttgggcc 293
>gb|BQ483975.1|BQ483975 WHE3515_A05_B09ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3515_A05_B09, mRNA sequence
Length = 545
Score = 190 bits (96), Expect = 1e-046
Identities = 194/227 (85%)
Strand = Plus / Minus
Query: 528 gttgccgaactggtccccgtgccgcgggcagcagaccatgggcacgccctccgagatggc 587
||||||| ||||||| |||||| ||||| ||||| ||| ||||||||||||| ||| ||
Sbjct: 523 gttgccgtactggtcgccgtgcagcgggtggcagatcatcggcacgccctccgcgatcgc 464
Query: 588 ctcgacggtggagttccaaccgttgtgggtgaggaaaccgccgacggccgggtgcgcgag 647
||| || ||||||||||| ||| ||||||||| ||| |||| || ||||||||||| ||
Sbjct: 463 ctccaccgtggagttccagccgctgtgggtgaagaaggcgcccaccgccgggtgcgccag 404
Query: 648 cacctcctcctgcggcgcccaggtgacgacgatnccgcggccgcgcacctcgtcctccac 707
|||||||||||||||||||||| | |||| || ||||| ||||||| ||| ||| | |
Sbjct: 403 cacctcctcctgcggcgcccagctcacgatcatgccgcgcccgcgcagctcctccccgag 344
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcc 754
||||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 343 cccgtcgggcagctcgccggactcgaacccgcggatgagcttgggcc 297
>gb|BG313174.1|BG313174 WHE2054_F07_L14ZS Wheat salt-stressed sheath cDNA library Triticum
aestivum cDNA clone WHE2054_F07_L14, mRNA sequence
Length = 376
Score = 188 bits (95), Expect = 4e-046
Identities = 219/260 (84%), Gaps = 1/260 (0%)
Strand = Plus / Minus
Query: 495 gcccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcgg 554
||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||
Sbjct: 307 gcccaccttccacacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgg 248
Query: 555 gcagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtg 614
|| |||| ||| ||||||||||||| ||| ||||| || ||||||||||| ||| ||||
Sbjct: 247 gcc-cagatcatcggcacgccctccgcgatcgcctccacngtggagttccacccgctgtg 189
Query: 615 ggtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgac 674
|||| ||| |||| || ||||||||||| ||||||||||| ||||||||||| | ||
Sbjct: 188 cgtgaagaaggcgcccaccgccgggtgcgccagcacctcctctngcggcgcccagctcac 129
Query: 675 gacgatnccgcggccgcgcacctcgtcctccaccccgtcgggcagcgcgccggactcgaa 734
|| || ||||| ||||||| ||| ||| | | ||||||||||||| |||||||||||||
Sbjct: 128 gatcatgccgcgcccgcgcagctcctccccgagcccgtcgggcagctcgccggactcgaa 69
Query: 735 gccgcggatgagattgggcc 754
||||||||||| |||||||
Sbjct: 68 cccgcggatgagcttgggcc 49
>gb|BE425760.1|BE425760 WHE0316_C11_C11ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0316_C11_C11, mRNA
sequence
Length = 372
Score = 184 bits (93), Expect = 6e-045
Identities = 218/260 (83%)
Strand = Plus / Minus
Query: 495 gcccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcgg 554
|||||||||||| |||||| ||||||||| ||||||| ||||||| |||||| ||||
Sbjct: 283 gcccaccttccatacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgg 224
Query: 555 gcagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtg 614
| ||||| ||| ||||||||||||||||| ||||| || || |||||||| ||| ||||
Sbjct: 223 gtggcagatcatcggcacgccctccgagatcgcctccaccgtcgagttccagccgctgtg 164
Query: 615 ggtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgac 674
|||| ||| |||| || ||||||||||| ||||||||||| |||||||||||| | ||
Sbjct: 163 cgtgaagaaggcgcccaccgccgggtgcgccagcacctcctcttgcggcgcccagctcac 104
Query: 675 gacgatnccgcggccgcgcacctcgtcctccaccccgtcgggcagcgcgccggactcgaa 734
|| | ||||| ||||||| ||| ||| | | ||||||||||||| |||||||||||||
Sbjct: 103 gatcttgccgcgcccgcgcagctcctccccgagcccgtcgggcagctcgccggactcgaa 44
Query: 735 gccgcggatgagattgggcc 754
||||||||||| |||||||
Sbjct: 43 cccgcggatgagcttgggcc 24
>gb|CA700350.1|CA700350 wkm1c.pk005.e20 wkm1c Triticum aestivum cDNA clone wkm1c.pk005.e20
5' end, mRNA sequence
Length = 504
Score = 167 bits (84), Expect = 1e-039
Identities = 191/227 (84%)
Strand = Plus / Minus
Query: 528 gttgccgaactggtccccgtgccgcgggcagcagaccatgggcacgccctccgagatggc 587
||||||| ||||||| |||||| |||| ||||| ||| ||||||||||||| ||| ||
Sbjct: 460 gttgccgtactggtcgccgtgcagcggttggcagatcatcggcacgccctccgcgatcgc 401
Query: 588 ctcgacggtggagttccaaccgttgtgggtgaggaaaccgccgacggccgggtgcgcgag 647
||| || ||||||||||| ||| ||||||||| ||| |||| || ||||||||||| ||
Sbjct: 400 ctccaccgtggagttccagccgctgtgggtgaagaaggcgcccaccgccgggtgcgccag 341
Query: 648 cacctcctcctgcggcgcccaggtgacgacgatnccgcggccgcgcacctcgtcctccac 707
|||||||||||||||||||||| |||| || ||||| ||||||| ||| ||| | |
Sbjct: 340 cacctcctcctgcggcgcccagcccacgatcatgccgcgcccgcgcagctcctccccgag 281
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcc 754
||||||||||||| | ||||||||||| ||||||||||| |||||||
Sbjct: 280 cccgtcgggcagctccccggactcgaacccgcggatgagcttgggcc 234
>gb|CV765720.1|CV765720 FGAS060107 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 851
Score = 163 bits (82), Expect = 2e-038
Identities = 194/229 (84%), Gaps = 2/229 (0%)
Strand = Plus / Minus
Query: 528 gttgccgaactggtccccgtgccgcgggcagcagaccatgggcacgccctccgagat-gg 586
||||||| ||||||| |||||| ||||| ||||| ||| ||||||||||||| ||| ||
Sbjct: 764 gttgccgtactggtcgccgtgcagcgggtggcagatcatcggcacgccctccgcgatcgg 705
Query: 587 cctcgacggtggagttccaaccgttgtgggtgaggaaaccgccgacggccgggtgcgcga 646
|||| || ||||||||||| ||| |||| |||| ||| |||| || ||||||||||| |
Sbjct: 704 cctccaccgtggagttccagccgctgtgcgtgaagaaggcgcccaccgccgggtgcgcca 645
Query: 647 gcacctcctcc-tgcggcgcccaggtgacgacgatnccgcggccgcgcacctcgtcctcc 705
||||||||||| |||||||||||| | |||| || ||||| ||||||| ||| ||| |
Sbjct: 644 gcacctcctccntgcggcgcccagctcacgatcatgccgcgcccgcgcagctcctccccg 585
Query: 706 accccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcc 754
| ||||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 584 agcccgtcgggcagctcgccggactcgaacccgcggatgagcttgggcc 536
>gb|CD915387.1|CD915387 G550.125P10F010713 G550 Triticum aestivum cDNA clone G550125P10,
mRNA sequence
Length = 463
Score = 149 bits (75), Expect = 3e-034
Identities = 188/226 (83%)
Strand = Plus / Minus
Query: 495 gcccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcgg 554
||||||| |||| |||||| ||||||||| ||||||| ||||||| |||||| ||||
Sbjct: 262 gcccaccctccagacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgg 203
Query: 555 gcagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtg 614
| ||||| ||| ||||||||||||| ||| ||||| || ||||||||||| ||| ||||
Sbjct: 202 gtggcagatcatcggcacgccctccgcgatcgcctccaccgtggagttccagccgctgtg 143
Query: 615 ggtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgac 674
||||| ||| |||| || ||||||||||| |||||||||||||||||||||||| ||
Sbjct: 142 ggtgaagaaggcgcccaccgccgggtgcgccagcacctcctcctgcggcgcccagcccac 83
Query: 675 gacgatnccgcggccgcgcacctcgtcctccaccccgtcgggcagc 720
|| || ||||| ||||||| ||| ||| | | |||||||||||||
Sbjct: 82 gatcatgccgcgcccgcgcagctcctccccgagcccgtcgggcagc 37
>gb|CA721277.1|CA721277 wdk9n.pk001.e20 wdk9n Triticum aestivum cDNA clone wdk9n.pk001.e20
5' end, mRNA sequence
Length = 516
Score = 141 bits (71), Expect = 8e-032
Identities = 149/175 (85%)
Strand = Plus / Plus
Query: 495 gcccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcgg 554
|||||||||||| |||||| ||||||||| ||||||| ||||||| |||||| ||||
Sbjct: 314 gcccaccttccatacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgg 373
Query: 555 gcagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtg 614
| ||||| ||| ||||||||||||||||| ||||| || || |||||||| ||| ||||
Sbjct: 374 gtggcagatcatcggcacgccctccgagatcgcctccaccgtcgagttccagccgctgtg 433
Query: 615 ggtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccag 669
|||| ||| |||| || ||||||||||| ||||||||||||||||||||||||
Sbjct: 434 cgtgaagaaggcgcccaccgccgggtgcgccagcacctcctcctgcggcgcccag 488
>gb|CD453688.1|CD453688 WHE0840_E04_J08ZT CS wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0840_E04_J08, mRNA sequence
Length = 537
Score = 141 bits (71), Expect = 8e-032
Identities = 149/175 (85%)
Strand = Plus / Plus
Query: 495 gcccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcgg 554
|||||||||||| |||||| ||||||||| ||||||| ||||||| |||||| ||||
Sbjct: 314 gcccaccttccatacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgg 373
Query: 555 gcagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtg 614
| ||||| ||| ||||||||||||||||| ||||| || || |||||||| ||| ||||
Sbjct: 374 gtggcagatcatcggcacgccctccgagatcgcctccaccgtcgagttccagccgctgtg 433
Query: 615 ggtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccag 669
|||| ||| |||| || ||||||||||| ||||||||||||||||||||||||
Sbjct: 434 cgtgaagaaggcgcccaccgccgggtgcgccagcacctcctcctgcggcgcccag 488
>gb|CA624642.1|CA624642 wl1n.pk0121.g11 wl1n Triticum aestivum cDNA clone wl1n.pk0121.g11
5' end, mRNA sequence
Length = 609
Score = 111 bits (56), Expect = 7e-023
Identities = 159/191 (83%), Gaps = 5/191 (2%)
Strand = Plus / Plus
Query: 362 cgatgcctttggccgcagcgatcttgaattccttcatcctctccttgatctcctcccctt 421
||||||| ||| ||||||||||||||| || |||||||||| | |||| |||||||||
Sbjct: 134 cgatgcccttgtccgcagcgatcttgagctcgttcatcctcttcctgatgccctcccctt 193
Query: 422 ccttggtgcca---aagagcctgtcgatggcggccttgacctggcctctctccagctgtt 478
||| | |||| | ||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 194 cctcgctgccgcccatgagcctgtcgatggcggccttgatctcccctctctccagctggt 253
Query: 479 cccccacgagctccgtgcccaccttccacacgtcgcacacgtacctcatgttgccga-ac 537
|||| ||| |||||||||||||||||| |||| | |||||||||| ||||||| ||
Sbjct: 254 ccccggcgacctccgtgcccaccttccagacgt-ggncacgtacctcgcgttgccgntac 312
Query: 538 tggtccccgtg 548
||||||||||
Sbjct: 313 nggtccccgtg 323
>gb|BE490447.1|BE490447 WHE0367_C11_E21ZS Wheat cold-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0367_C11_E21, mRNA
sequence
Length = 336
Score = 107 bits (54), Expect = 1e-021
Identities = 101/117 (86%)
Strand = Plus / Minus
Query: 638 ggtgcgcgagcacctcctcctgcggcgcccaggtgacgacgatnccgcggccgcgcacct 697
||||||| |||||||||||||||||||||||| | |||| | ||||| ||||||| ||
Sbjct: 336 ggtgcgccagcacctcctcctgcggcgcccagctcacgatcttgccgcgcccgcgcagct 277
Query: 698 cgtcctccaccccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcc 754
| ||| | | ||||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 276 cctccccgagcccgtcgggcagctcgccggactcgaacccgcggatgagcttgggcc 220
>gb|BE406114.1|BE406114 WHE0404_c07_c07zB Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0404_c07_c07, mRNA
sequence
Length = 385
Score = 105 bits (53), Expect = 4e-021
Identities = 149/181 (82%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 375 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 316
Query: 556 cagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtgg 615
||| | ||| |||||||||||||| | ||| || || ||||||||||| ||| ||||
Sbjct: 315 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 256
Query: 616 gtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgacg 675
|||| |||| ||| || || ||||| |||||||||||| ||||||| |||||| |||||
Sbjct: 255 gtgatgaaaaagcctaccgcagggtgggcgagcacctccacctgcggtgcccagctgacg 196
Query: 676 a 676
|
Sbjct: 195 a 195
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 163 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 113
>gb|BJ281677.1|BJ281677 BJ281677 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23e01 5', mRNA sequence
Length = 549
Score = 105 bits (53), Expect = 4e-021
Identities = 149/181 (82%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 436 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 377
Query: 556 cagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtgg 615
||| | ||| |||||||||||||| | ||| || || ||||||||||| ||| ||||
Sbjct: 376 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 317
Query: 616 gtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgacg 675
|||| ||| |||| || || ||||| |||||||||||| ||||||| |||||| |||||
Sbjct: 316 gtgatgaaggcgcctaccgcagggtgggcgagcacctccacctgcggtgcccagctgacg 257
Query: 676 a 676
|
Sbjct: 256 a 256
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 224 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 174
>gb|BQ578302.1|BQ578302 WHE0301_D03_G05ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0301_D03_G05, mRNA
sequence
Length = 662
Score = 105 bits (53), Expect = 4e-021
Identities = 149/181 (82%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 299 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 240
Query: 556 cagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtgg 615
||| | ||| |||||||||||||| | ||| || || ||||||||||| ||| ||||
Sbjct: 239 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 180
Query: 616 gtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgacg 675
|||| ||| |||| || || ||||| |||||||||||| ||||||| |||||| |||||
Sbjct: 179 gtgatgaaggcgcctaccgcagggtgggcgagcacctccacctgcggtgcccagctgacg 120
Query: 676 a 676
|
Sbjct: 119 a 119
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 87 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 37
>gb|CD373574.1|CD373574 WHE0425_A04_A07ZT CS wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0425_A04_A07, mRNA
sequence
Length = 680
Score = 105 bits (53), Expect = 4e-021
Identities = 149/181 (82%)
Strand = Plus / Plus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 328 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 387
Query: 556 cagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtgg 615
||| | ||| |||||||||||||| | ||| || || ||||||||||| ||| ||||
Sbjct: 388 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 447
Query: 616 gtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgacg 675
|||| ||| |||| || || ||||| |||||||||||| ||||||| |||||| |||||
Sbjct: 448 gtgatgaaggcgcctaccgcagggtgggcgagcacctccacctgcggtgcccagctgacg 507
Query: 676 a 676
|
Sbjct: 508 a 508
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 540 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 590
>gb|BF474053.1|BF474053 WHE0840_E04_J08ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0840_E04_J08, mRNA sequence
Length = 450
Score = 103 bits (52), Expect = 2e-020
Identities = 130/156 (83%)
Strand = Plus / Minus
Query: 495 gcccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcgg 554
|||||||||||| |||||| ||||||||| ||||||| ||||||| |||||| ||||
Sbjct: 156 gcccaccttccatacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgg 97
Query: 555 gcagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtg 614
| ||||| ||| ||||||||||||||||| ||||| || || |||||||| ||| ||||
Sbjct: 96 gtggcagatcatcggcacgccctccgagatcgcctccaccgtcgagttccagccgctgtg 37
Query: 615 ggtgaggaaaccgccgacggccgggtgcgcgagcac 650
|||| ||| |||| || ||||||||||| |||||
Sbjct: 36 cgtgaagaaggcgcccaccgccgggtgcgccagcac 1
>gb|CD865781.1|CD865781 AZO2.101M06F001124 AZO2 Triticum aestivum cDNA clone AZO2101M06,
mRNA sequence
Length = 723
Score = 103 bits (52), Expect = 2e-020
Identities = 148/180 (82%)
Strand = Plus / Minus
Query: 497 ccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcgggc 556
|||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 580 ccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggga 521
Query: 557 agcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtggg 616
||| | ||| |||||||||||||| | ||| || || ||||||||||| ||| |||| |
Sbjct: 520 ggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgcg 461
Query: 617 tgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgacga 676
||| ||| |||| || || ||||| |||||||||||| ||||||| |||||| ||||||
Sbjct: 460 tgatgaaggcgcctaccgcagggtgggcgagcacctccacctgcggtgcccagctgacga 401
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 369 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 319
>gb|CD867745.1|CD867745 AZO2.107B06R010328 AZO2 Triticum aestivum cDNA clone AZO2107B06,
mRNA sequence
Length = 542
Score = 97.6 bits (49), Expect = 1e-018
Identities = 148/181 (81%)
Strand = Plus / Plus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 324 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 383
Query: 556 cagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtgg 615
||| | ||| |||||||||||||| | ||| || || ||||||||||| ||| || |
Sbjct: 384 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgcgc 443
Query: 616 gtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgacg 675
|||| ||| |||| || || ||||| |||||||||||| ||||||| |||||| |||||
Sbjct: 444 gtgatgaaggcgcctaccgcagggtgggcgagcacctccacctgcggtgcccagctgacg 503
Query: 676 a 676
|
Sbjct: 504 a 504
>gb|CK193504.1|CK193504 FGAS001918 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 821
Score = 97.6 bits (49), Expect = 1e-018
Identities = 148/181 (81%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 564 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 505
Query: 556 cagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtgg 615
||| | ||| |||||||||||||| | ||| || || ||||||||||| ||| ||||
Sbjct: 504 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 445
Query: 616 gtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgacg 675
|||| ||| |||| || || || || |||||||||||| ||||||| |||||| |||||
Sbjct: 444 gtgatgaaggcgcctaccgcaggatgggcgagcacctccacctgcggtgcccagctgacg 385
Query: 676 a 676
|
Sbjct: 384 a 384
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 352 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 302
>gb|BE405606.1|BE405606 WHE1209_C09_E17ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1209_C09_E17, mRNA
sequence
Length = 634
Score = 91.7 bits (46), Expect = 7e-017
Identities = 136/166 (81%)
Strand = Plus / Minus
Query: 511 tcgcacacgtacctcatgttgccgaactggtccccgtgccgcgggcagcagaccatgggc 570
|||||||||||||| ||||| ||||||||| |||||| |||| ||| | ||| |||
Sbjct: 627 tcgcacacgtacctggcgttgctgaactggtctccgtgcaacgggaggcatatcatcggc 568
Query: 571 acgccctccgagatggcctcgacggtggagttccaaccgttgtgggtgaggaaaccgccg 630
||||||||||| | ||| || || ||||||||||| ||| |||| |||| ||| ||||
Sbjct: 567 acgccctccgacacggcttccaccgtggagttccagccgctgtgcgtgatgaaggcgcct 508
Query: 631 acggccgggtgcgcgagcacctcctcctgcggcgcccaggtgacga 676
|| || ||||| |||||||||||| ||||||| |||||| ||||||
Sbjct: 507 accgcagggtgggcgagcacctccacctgcggtgcccagctgacga 462
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 430 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 380
>gb|BQ743938.1|BQ743938 WHE4109_H10_O19ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4109_H10_O19, mRNA sequence
Length = 656
Score = 91.7 bits (46), Expect = 7e-017
Identities = 136/166 (81%)
Strand = Plus / Minus
Query: 511 tcgcacacgtacctcatgttgccgaactggtccccgtgccgcgggcagcagaccatgggc 570
|||||||||||||| ||||| ||||||||| |||||| |||| ||| | ||| |||
Sbjct: 650 tcgcacacgtacctggcgttgctgaactggtctccgtgcaacgggaggcatatcatcggc 591
Query: 571 acgccctccgagatggcctcgacggtggagttccaaccgttgtgggtgaggaaaccgccg 630
||||||||||| | ||| || || ||||||||||| ||| |||| |||| ||| ||||
Sbjct: 590 acgccctccgacacggcttccaccgtggagttccagccgctgtgcgtgatgaaggcgcct 531
Query: 631 acggccgggtgcgcgagcacctcctcctgcggcgcccaggtgacga 676
|| || ||||| |||||||||||| ||||||| |||||| ||||||
Sbjct: 530 accgcagggtgggcgagcacctccacctgcggtgcccagctgacga 485
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 453 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 403
>gb|CA615835.1|CA615835 wr1.pk169.d2 wr1 Triticum aestivum cDNA clone wr1.pk169.d2 5' end,
mRNA sequence
Length = 521
Score = 91.7 bits (46), Expect = 7e-017
Identities = 149/182 (81%), Gaps = 1/182 (0%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgcc-gaactggtccccgtgccgcgg 554
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| |||
Sbjct: 223 cccaccttccagacatcgcacacgtacctggcgttgcttgaactggtctccgtgcaacgg 164
Query: 555 gcagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtg 614
| ||| | ||| |||||||||||||| | ||| || || ||||||||||| ||| ||||
Sbjct: 163 gaggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtg 104
Query: 615 ggtgaggaaaccgccgacggccgggtgcgcgagcacctcctcctgcggcgcccaggtgac 674
|||| ||| |||| || || ||||| |||||||||||| ||||||| |||||| ||||
Sbjct: 103 cgtgatgaaggcgcctaccgcagggtgggcgagcacctccacctgcggtgcccagctgac 44
Query: 675 ga 676
||
Sbjct: 43 ga 42
>gb|CA615942.1|CA615942 wr1.pk166.f6 wr1 Triticum aestivum cDNA clone wr1.pk166.f6 5' end,
mRNA sequence
Length = 464
Score = 73.8 bits (37), Expect = 2e-011
Identities = 102/124 (82%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 152 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 93
Query: 556 cagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtgg 615
||| | ||| |||||||||||||| | ||| || || ||||||||||| ||| ||||
Sbjct: 92 aggcatatcatcggcacgccctccgacacggcntccaccgtggagttccagccgctgtgc 33
Query: 616 gtga 619
||||
Sbjct: 32 gtga 29
>gb|CA604693.1|CA604693 wr1.pk0043.b10 wr1 Triticum aestivum cDNA clone wr1.pk0043.b10 5'
end, mRNA sequence
Length = 708
Score = 71.9 bits (36), Expect = 6e-011
Identities = 102/124 (82%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 130 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 71
Query: 556 cagcagaccatgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtgg 615
||| | ||| |||||||||||||| | ||| || || ||||||||||| ||| ||||
Sbjct: 70 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 11
Query: 616 gtga 619
||||
Sbjct: 10 gtga 7
>gb|BE415485.1|BE415485 MWL031.D01000324 ITEC MWL Wheat Root Library Triticum aestivum cDNA
clone MWL031.D01, mRNA sequence
Length = 319
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcc 754
||||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 301 cccgtcgggcagctcgccggactcgaacccgcggatgagcttgggcc 255
>gb|CA719313.1|CA719313 wkm2n.pk003.k18 wkm2n Triticum aestivum cDNA clone wkm2n.pk003.k18
5' end, mRNA sequence
Length = 491
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcc 754
||||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 194 cccgtcgggcagctcgccggactcgaacccgcggatgagcttgggcc 148
>gb|CA630327.1|CA630327 wle1n.pk0032.d11 wle1n Triticum aestivum cDNA clone
wle1n.pk0032.d11 5' end, mRNA sequence
Length = 508
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 116 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 57
Query: 556 cagcagaccatgggcacgccctccgagatggcctcgacggtggagttcca 605
||| | ||| |||||||||||||| | ||| || || |||||||||||
Sbjct: 56 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttcca 7
>gb|AJ614016.1|AJ614016 AJ614016 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 09638R, mRNA
sequence
Length = 390
Score = 63.9 bits (32), Expect = 2e-008
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcc 754
|||||||| |||| ||||||||||||| ||||||||||| |||||||
Sbjct: 386 cccgtcggncagctcgccggactcgaacccgcggatgagcttgggcc 340
>gb|BE405326.1|BE405326 WHE1213_A08_A15ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1213_A08_A15, mRNA
sequence
Length = 514
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 465 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 415
>gb|BE405850.1|BE405850 WHE0425_A04_A07ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0425_A04_A07, mRNA
sequence
Length = 335
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 286 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 236
>gb|BI480519.1|BI480519 WHE2904_C05_F10ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2904_C05_F10, mRNA
sequence
Length = 421
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 373 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 323
>gb|CA719066.1|CA719066 wkm2n.pk003.n22 wkm2n Triticum aestivum cDNA clone wkm2n.pk003.n22
5' end, mRNA sequence
Length = 470
Score = 61.9 bits (31), Expect = 6e-008
Identities = 146/183 (79%), Gaps = 2/183 (1%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||| ||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 322 cccacnttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 263
Query: 556 cagcagaccatgggcacgccctccgagatggcctcgacggt-ggagttccaaccgttgtg 614
||| | ||| |||| ||||||||| | ||| || || || ||||||||| ||| ||||
Sbjct: 262 aggcatatcatcggcangccctccgacacggcttccacngttggagttccagccgctgtg 203
Query: 615 ggtgaggaaaccgccgacg-gccgggtgcgcgagcacctcctcctgcggcgcccaggtga 673
|||| ||| ||| || || ||||| |||||||||||| ||||||| |||||| |||
Sbjct: 202 cgtgatgaaggcgcntacccgcagggtgggcgagcacctccacctgcggtgcccagctga 143
Query: 674 cga 676
|||
Sbjct: 142 cga 140
Score = 42.1 bits (21), Expect = 0.056
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgag 746
||||||||||||| ||||||||| | |||||||||||
Sbjct: 108 cccgtcgggcagctgnccggactcgtanccgcggatgag 70
>gb|CA720605.1|CA720605 wkm2n.pk007.f4 wkm2n Triticum aestivum cDNA clone wkm2n.pk007.f4 5'
end, mRNA sequence
Length = 342
Score = 61.9 bits (31), Expect = 6e-008
Identities = 87/106 (82%)
Strand = Plus / Minus
Query: 564 catgggcacgccctccgagatggcctcgacggtggagttccaaccgttgtgggtgaggaa 623
||| ||||||||||| || | ||| || || ||||||||||| ||| |||| |||| |||
Sbjct: 204 catnggcacgccctcggacacggcttccaccgtggagttccagccgctgtgcgtgatgaa 145
Query: 624 accgccgacggccgggtgcgcgagcacctcctcctgcggcgcccag 669
|||| || || ||||| |||||||||||| ||||||| ||||||
Sbjct: 144 ggcgcctaccgcagggtgggcgagcacctccacctgcggtgcccag 99
Score = 50.1 bits (25), Expect = 2e-004
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||| | ||| ||||||||| ||||||||||
Sbjct: 60 cccgtcgggcagctggccggactngtagcngcggatgagcgtgggcctgac 10
>gb|CD867744.1|CD867744 AZO2.107B06F001113 AZO2 Triticum aestivum cDNA clone AZO2107B06,
mRNA sequence
Length = 530
Score = 61.9 bits (31), Expect = 6e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 368 cccgtcgggcagctggccggactcgtagccgcggatgagcgtgggcctgac 318
Score = 56.0 bits (28), Expect = 4e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 597 ggagttccaaccgttgtgggtgaggaaaccgccgacggccgggtgcgcgagcacctcctc 656
||||||||| ||| |||| |||| ||| |||| || || ||||| |||||||||||| |
Sbjct: 479 ggagttccagccgctgtgcgtgatgaaggcgcctaccgcagggtgggcgagcacctccac 420
Query: 657 ctgcggcgcccaggtgacga 676
|||||| |||||| ||||||
Sbjct: 419 ctgcggtgcccagctgacga 400
>gb|CA604032.1|CA604032 wr1.pk0033.e10 wr1 Triticum aestivum cDNA clone wr1.pk0033.e10 5'
end, mRNA sequence
Length = 469
Score = 60.0 bits (30), Expect = 2e-007
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 102 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 43
Query: 556 cagcagaccatgggcacgccctccga 581
||| | ||| ||||||||||||||
Sbjct: 42 aggcatatcatcggcacgccctccga 17
>gb|CA633057.1|CA633057 wle1n.pk0065.f6 wle1n Triticum aestivum cDNA clone wle1n.pk0065.f6
5' end, mRNA sequence
Length = 505
Score = 60.0 bits (30), Expect = 2e-007
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 97 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 38
Query: 556 cagcagaccatgggcacgccctccga 581
||| | ||| ||||||||||||||
Sbjct: 37 aggcatatcatcggcacgccctccga 12
>gb|BI480329.1|BI480329 WHE2901_G07_M13ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2901_G07_M13, mRNA
sequence
Length = 415
Score = 56.0 bits (28), Expect = 4e-006
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 708 cccgtcgggcagcgcgccggactcgaagccgcggatgagattgggcctgac 758
|||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 369 cccgtcgggcagntggccggactcgtagccgcggatgagcgtgggcctgac 319
>gb|CA615191.1|CA615191 wr1.pk178.a6 wr1 Triticum aestivum cDNA clone wr1.pk178.a6 5' end,
mRNA sequence
Length = 404
Score = 56.0 bits (28), Expect = 4e-006
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgccgcggg 555
||||||||||| || |||||||||||||| ||||| ||||||||| |||||| ||||
Sbjct: 84 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 25
Query: 556 cagcagaccatgggcacgccctcc 579
||| | ||| ||||||||||||
Sbjct: 24 aggcatatcatcggcacgccctcc 1
>gb|CA636643.1|CA636643 wle1n.pk0111.c6 wle1n Triticum aestivum cDNA clone wle1n.pk0111.c6
5' end, mRNA sequence
Length = 394
Score = 52.0 bits (26), Expect = 6e-005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgc 549
||||||||||| || |||||||||||||| ||||| ||||||||| ||||||
Sbjct: 73 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgc 20
>gb|CK195337.1|CK195337 FGAS003776 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 52.0 bits (26), Expect = 6e-005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtccccgtgc 549
||||||||||| || |||||||||||||| ||||| ||||||||| ||||||
Sbjct: 170 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgc 117
>gb|BJ295748.1|BJ295748 BJ295748 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl5e11 3', mRNA sequence
Length = 729
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 634 gccgggtgcgcgagcacctcctcctgcggcgcccagg 670
||||||||| |||||||||| |||||||||||||||
Sbjct: 656 gccgggtgccggagcacctccacctgcggcgcccagg 692
>gb|CA720937.1|CA720937 wkm2n.pk008.h12 wkm2n Triticum aestivum cDNA clone wkm2n.pk008.h12
5' end, mRNA sequence
Length = 308
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 598 gagttccaaccgttgtgggtgaggaaaccgccgacggccgggtgc 642
|||||||| ||| ||||||||||||| ||||||||||| |||||
Sbjct: 133 gagttccacccgctgtgggtgaggaagacgccgacggcctggtgc 89
>gb|BU101240.1|BU101240 WHE3366_E07_J14ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3366_E07_J14,
mRNA sequence
Length = 495
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 496 cccaccttccacacgtcgcacacgtacctcatgttgccgaactggtc 542
||||||||||| || |||||||||||||| ||||| |||||||||
Sbjct: 63 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtc 17
>gb|BE516604.1|BE516604 WHE0630_B10_C20ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0630_B10_C20, mRNA sequence
Length = 114
Score = 44.1 bits (22), Expect = 0.014
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 495 gcccaccttccacacgtcgcacacgtacct 524
||||||||||||||||||| |||||||||
Sbjct: 66 gcccaccttccacacgtcggccacgtacct 95
>gb|BJ289424.1|BJ289424 BJ289424 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl5e11 5', mRNA sequence
Length = 573
Score = 44.1 bits (22), Expect = 0.014
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 645 gagcacctcctcctgcggcgcccagg 670
|||||||||| |||||||||||||||
Sbjct: 572 gagcacctccacctgcggcgcccagg 547
>gb|BQ753201.1|BQ753201 WHE4124_C05_F10ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4124_C05_F10, mRNA sequence
Length = 666
Score = 44.1 bits (22), Expect = 0.014
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 631 acggccgggtgcgcgagcacctcctcctgcggcgccca 668
|||||||||||||| || | ||||| ||||||||||||
Sbjct: 202 acggccgggtgcgccaggatctccttctgcggcgccca 165
>gb|CA604775.1|CA604775 wr1.pk0039.h4 wr1 Triticum aestivum cDNA clone wr1.pk0039.h4 5'
end, mRNA sequence
Length = 566
Score = 44.1 bits (22), Expect = 0.014
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 631 acggccgggtgcgcgagcacctcctcctgcggcgccca 668
||||||| |||| |||| |||||||||||||||||||
Sbjct: 145 acggccgcgtgccggagctcctcctcctgcggcgccca 108
>gb|BQ837969.1|BQ837969 WHE2905_A11_A21ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2905_A11_A21, mRNA
sequence
Length = 798
Score = 42.1 bits (21), Expect = 0.056
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 644 cgagcacctcctcctgcggcgccca 668
|||||||||||| ||||||||||||
Sbjct: 454 cgagcacctcctgctgcggcgccca 430
>gb|CK217334.1|CK217334 FGAS029336 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1141
Score = 42.1 bits (21), Expect = 0.056
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 574 ccctccgagatggcctcgacg 594
|||||||||||||||||||||
Sbjct: 646 ccctccgagatggcctcgacg 666
>gb|BE471248.1|BE471248 WHE0286_A01_B02ZS Wheat drought-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0286_A01_B02, mRNA
sequence
Length = 594
Score = 40.1 bits (20), Expect = 0.22
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 341 cgtcgacgtcgacgccgatg 360
||||||||||||||||||||
Sbjct: 287 cgtcgacgtcgacgccgatg 268
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 202,554
Number of Sequences: 636343
Number of extensions: 202554
Number of successful extensions: 57877
Number of sequences better than 0.5: 64
Number of HSP's better than 0.5 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57711
Number of HSP's gapped (non-prelim): 160
length of query: 774
length of database: 367,240,239
effective HSP length: 19
effective length of query: 755
effective length of database: 355,149,722
effective search space: 268138040110
effective search space used: 268138040110
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)