BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2440419.2.1
         (616 letters)

Database: Triticum_nucl_with_EST.fasta 
           636,343 sequences; 367,240,239 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BT008984.1|  Triticum aestivum clone wdk2c.pk007.b15:fis,...   478   e-133
gb|BJ319189.1|BJ319189  BJ319189 Y. Ogihara unpublished cDNA...   313   8e-084
gb|CA608984.1|CA608984  wr1.pk0100.d9 wr1 Triticum aestivum ...   182   2e-044
gb|BT009516.1|  Triticum aestivum clone wr1.pk0100.d9:fis, f...   182   2e-044
gb|BJ261392.1|BJ261392  BJ261392 Y. Ogihara unpublished cDNA...   161   7e-038
gb|BJ231160.1|BJ231160  BJ231160 Y. Ogihara unpublished cDNA...   157   1e-036
gb|BQ237253.1|BQ237253  TaE05019F09F TaE05 Triticum aestivum...   133   2e-029
gb|BJ228528.1|BJ228528  BJ228528 Y. Ogihara unpublished cDNA...   127   1e-027
gb|BQ166623.1|BQ166623  WHE0906_E01_I02ZT Wheat 5-15 DAP spi...   119   2e-025
gb|BE606819.1|BE606819  WHE0906_E01_I02ZS Wheat 5-15 DAP spi...    92   5e-017
gb|BQ240282.1|BQ240282  TaE05019F09R TaE05 Triticum aestivum...    92   5e-017
gb|CD936892.1|CD936892  OV.105G14F010220 OV Triticum aestivu...    84   1e-014
gb|BQ578381.1|BQ578381  WHE0302_C02_E04ZS Wheat unstressed s...    80   2e-013
gb|BJ279341.1|BJ279341  BJ279341 Y. Ogihara unpublished cDNA...    62   5e-008
gb|BQ743914.1|BQ743914  WHE4109_F08_K15ZS Wheat salt-stresse...    62   5e-008
gb|CD491640.1|CD491640  WHE2851_E09_I17ZT CS wheat unstresse...    46   0.003
gb|CV776321.1|CV776321  FGAS070725 Triticum aestivum FGAS: L...    44   0.011
gb|CD904146.1|CD904146  G356.112J16F010920 G356 Triticum aes...    40   0.18 
gb|CD904147.1|CD904147  G356.112J16R011029 G356 Triticum aes...    40   0.18 
>gb|BT008984.1| Triticum aestivum clone wdk2c.pk007.b15:fis, full insert mRNA
            sequence
          Length = 2056

 Score =  478 bits (241), Expect = e-133
 Identities = 393/444 (88%)
 Strand = Plus / Minus

                                                                        
Query: 120  catgagcgcggtggccgnggcgccacaggatacagcctcgttgggcaccttggcgacgag 179
            ||||||||||||||||| |||||| ||||| || ||||| |||||||||||| ||||| |
Sbjct: 1798 catgagcgcggtggccgtggcgccgcaggagacggcctccttgggcaccttgccgacgcg 1739

                                                                        
Query: 180  gtcgacagcctcagcgaagatgacgcccatgcccatgtggaggtgcggctcgatatggca 239
            |||||  ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1738 gtcgatggcctcggcgaagatgacccccatgcccatgtggaggtgcggctcgatgtggca 1679

                                                                        
Query: 240  gtggaaggcccacacgcccgggttgtccgccacgaaccggagcatcgtccacccgtacgg 299
            |||||| |||||||| || |||||||||||||||||||| |||  |||||||||||||||
Sbjct: 1678 gtggaacgcccacaccccggggttgtccgccacgaaccgcagcgccgtccacccgtacgg 1619

                                                                        
Query: 300  aaagatgaccgccgtgttccgcagcggcgggtcccggaggttgagccgcgcttcgtcggc 359
             ||||| ||||||||||||||||||||||||| |   ||||| |||| |||  |||||||
Sbjct: 1618 gaagatcaccgccgtgttccgcagcggcgggttcaccaggttcagcctcgccgcgtcggc 1559

                                                                        
Query: 360  ggcgtccccgcggtacgcgccgtcgccgtagcccagcacccagaagtcgtggccgtggag 419
            |||||| || | ||||||||| |||||||| |||||||||||||||||||||||||| ||
Sbjct: 1558 ggcgtcgcccctgtacgcgccctcgccgtaccccagcacccagaagtcgtggccgtgcag 1499

                                                                        
Query: 420  gtgccacgggtgcacctcgctgacgttgcgcgacagcgcgttggcgttctggagcagcac 479
            |||||||||||||||||||||||||||| ||   |||||||||||||||||||||| |||
Sbjct: 1498 gtgccacgggtgcacctcgctgacgttgtgctggagcgcgttggcgttctggagcaccac 1439

                                                                        
Query: 480  gtcgacggtggtgttgtgcgccaggacgtacacgttgtcccccgccgtcgtgttggggtt 539
            ||| || |||||||||||    || ||||| ||||||||||||| |||||||||||||||
Sbjct: 1438 gtccaccgtggtgttgtggcggagcacgtagacgttgtcccccgtcgtcgtgttggggtt 1379

                                    
Query: 540  cggcggcggcagcgtcacgtcgta 563
              |||||||| |||||||||||||
Sbjct: 1378 gtgcggcggccgcgtcacgtcgta 1355
>gb|BJ319189.1|BJ319189 BJ319189 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
           aestivum cDNA clone whyf5g20 3', mRNA sequence
          Length = 289

 Score =  313 bits (158), Expect = 8e-084
 Identities = 235/261 (90%)
 Strand = Plus / Plus

                                                                       
Query: 187 gcctcagcgaagatgacgcccatgcccatgtggaggtgcggctcgatatggcagtggaag 246
           ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 13  gcctcggcgaagatgacccccatgcccatgtggaggtgcggctcgatgtggcagtggaac 72

                                                                       
Query: 247 gcccacacgcccgggttgtccgccacgaaccggagcatcgtccacccgtacggaaagatg 306
           |||||||| || |||||||||||||||||||| |||  ||||||||||||||| ||||| 
Sbjct: 73  gcccacaccccggggttgtccgccacgaaccgcagcgccgtccacccgtacgggaagatc 132

                                                                       
Query: 307 accgccgtgttccgcagcggcgggtcccggaggttgagccgcgcttcgtcggcggcgtcc 366
           ||||||||||||||||||||||||| |   ||||| |||| |||  ||||||||||||| 
Sbjct: 133 accgccgtgttccgcagcggcgggttcaccaggttcagcctcgccgcgtcggcggcgtcg 192

                                                                       
Query: 367 ccgcggtacgcgccgtcgccgtagcccagcacccagaagtcgtggccgtggaggtgccac 426
           || | ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 193 cccctgtacgcgccctcgccgtaccccagcacccagaagtcgtggccgtgcaggtgccac 252

                                
Query: 427 gggtgcacctcgctgacgttg 447
           |||||||||| ||||||||||
Sbjct: 253 gggtgcacctngctgacgttg 273
>gb|CA608984.1|CA608984 wr1.pk0100.d9 wr1 Triticum aestivum cDNA clone wr1.pk0100.d9 5'
           end, mRNA sequence
          Length = 416

 Score =  182 bits (92), Expect = 2e-044
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                       
Query: 120 catgagcgcggtggccgnggcgccacaggatacagcctcgttgggcaccttggcgacgag 179
           ||||||||||||||||| |||||| ||||| || ||||| |||||||||||  ||||| |
Sbjct: 169 catgagcgcggtggccgtggcgccgcaggagacggcctccttgggcaccttcccgacgcg 110

                                                                       
Query: 180 gtcgacagcctcagcgaagatgacgcccatgcccatgtggaggtgcggctcgatatggca 239
           |||||  ||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 109 gtcgatggcctcggcgaagatgacccccatccccatgtggaggtgcggctcgatgtggca 50

                                                  
Query: 240 gtggaaggcccacacgcccgggttgtccgccacgaaccg 278
           |||||| |||||||| || ||||||||||||||||||||
Sbjct: 49  gtggaacgcccacaccccggggttgtccgccacgaaccg 11
>gb|BT009516.1| Triticum aestivum clone wr1.pk0100.d9:fis, full insert mRNA
           sequence
          Length = 491

 Score =  182 bits (92), Expect = 2e-044
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                       
Query: 120 catgagcgcggtggccgnggcgccacaggatacagcctcgttgggcaccttggcgacgag 179
           ||||||||||||||||| |||||| ||||| || ||||| |||||||||||  ||||| |
Sbjct: 176 catgagcgcggtggccgtggcgccgcaggagacggcctccttgggcaccttcccgacgcg 117

                                                                       
Query: 180 gtcgacagcctcagcgaagatgacgcccatgcccatgtggaggtgcggctcgatatggca 239
           |||||  ||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 116 gtcgatggcctcggcgaagatgacccccatccccatgtggaggtgcggctcgatgtggca 57

                                                  
Query: 240 gtggaaggcccacacgcccgggttgtccgccacgaaccg 278
           |||||| |||||||| || ||||||||||||||||||||
Sbjct: 56  gtggaacgcccacaccccggggttgtccgccacgaaccg 18
>gb|BJ261392.1|BJ261392 BJ261392 Y. Ogihara unpublished cDNA library, Wh_h Triticum
           aestivum cDNA clone whh2l10 3', mRNA sequence
          Length = 328

 Score =  161 bits (81), Expect = 7e-038
 Identities = 131/149 (87%)
 Strand = Plus / Plus

                                                                       
Query: 120 catgagcgcggtggccgnggcgccacaggatacagcctcgttgggcaccttggcgacgag 179
           ||||||||||||||||| |||||| || || || ||||| |||||||||||| ||||| |
Sbjct: 180 catgagcgcggtggccgtggcgccgcangagacggcctccttgggcaccttgccgacgcg 239

                                                                       
Query: 180 gtcgacagcctcagcgaagatgacgcccatgcccatgtggaggtgcggctcgatatggca 239
           |||||  ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 240 gtcgatggcctcggcgaagatgacccccatgcccatgtggaggtgcggctcgatgtggna 299

                                        
Query: 240 gtggaaggcccacacgcccgggttgtccg 268
            ||||| |||||||| || ||||||||||
Sbjct: 300 ntggaacgcccacaccccggggttgtccg 328
>gb|BJ231160.1|BJ231160 BJ231160 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
           aestivum cDNA clone whdl25l06 3', mRNA sequence
          Length = 359

 Score =  157 bits (79), Expect = 1e-036
 Identities = 131/149 (87%)
 Strand = Plus / Plus

                                                                       
Query: 120 catgagcgcggtggccgnggcgccacaggatacagcctcgttgggcaccttggcgacgag 179
           ||||||||||||||||| |||||| ||||| || ||||| |||||||||||  ||||| |
Sbjct: 211 catgagcgcggtggccgtggcgccgcaggagacggcctccttgggcaccttcccgacgcg 270

                                                                       
Query: 180 gtcgacagcctcagcgaagatgacgcccatgcccatgtggaggtgcggctcgatatggca 239
           |||||  ||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 271 gtcgatggcctcngcgaagatgacccccatccccatgtggaggtgcggctcgatgtggca 330

                                        
Query: 240 gtggaaggcccacacgcccgggttgtccg 268
           |||||| |||||||| ||  |||||||||
Sbjct: 331 gtggaacgcccacaccccgtggttgtccg 359
>gb|BQ237253.1|BQ237253 TaE05019F09F TaE05 Triticum aestivum cDNA clone TaE05019F09F, mRNA
           sequence
          Length = 366

 Score =  133 bits (67), Expect = 2e-029
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                       
Query: 203 cgcccatgcccatgtggaggtgcggctcgatatggcagtggaaggcccacacgcccgggt 262
           ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||  ||
Sbjct: 83  cgcccatgcccatgtggaggtgcggctcgatgtggcagtggaacgcccacgcgcccacgt 142

                                                                       
Query: 263 tgtccgccacgaaccggagcatcgtccacccgtacggaaagatgaccgccgtgttccgca 322
           |||| || |||||||||| |  ||||||||||| ||| || |  ||| ||||||||||||
Sbjct: 143 tgtcggcgacgaaccggatcgccgtccacccgtgcgggaacaacaccaccgtgttccgca 202

                      
Query: 323 gcggcgggtcc 333
           |||||||||||
Sbjct: 203 gcggcgggtcc 213

 Score = 91.7 bits (46), Expect = 5e-017
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                       
Query: 382 tcgccgtagcccagcacccagaagtcgtggccgtggaggtgccacgggtgcacctcgctg 441
           |||||||| |||||||||||||||||||||||||| |||||||||||||||  |||||||
Sbjct: 259 tcgccgtaccccagcacccagaagtcgtggccgtgcaggtgccacgggtgcgtctcgctg 318

                 
Query: 442 acgttg 447
            |||||
Sbjct: 319 tcgttg 324
>gb|BJ228528.1|BJ228528 BJ228528 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
           aestivum cDNA clone whdl6m17 3', mRNA sequence
          Length = 651

 Score =  127 bits (64), Expect = 1e-027
 Identities = 121/140 (86%)
 Strand = Plus / Plus

                                                                       
Query: 194 cgaagatgacgcccatgcccatgtggaggtgcggctcgatatggcagtggaaggcccaca 253
           |||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||| 
Sbjct: 281 cgaagacggcgcccatgcccatgtggaggtgcggctcgatgtggcagtggaacgcccacg 340

                                                                       
Query: 254 cgcccgggttgtccgccacgaaccggagcatcgtccacccgtacggaaagatgaccgccg 313
           |||||  |||||| || |||||||||| |  |||||| |||| ||| || |  ||| |||
Sbjct: 341 cgcccacgttgtcggcgacgaaccggatcgccgtccagccgtgcgggaacaccaccaccg 400

                               
Query: 314 tgttccgcagcggcgggtcc 333
           ||||||||||||||||||||
Sbjct: 401 tgttccgcagcggcgggtcc 420

 Score = 91.7 bits (46), Expect = 5e-017
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                       
Query: 382 tcgccgtagcccagcacccagaagtcgtggccgtggaggtgccacgggtgcacctcgctg 441
           |||||||| |||||||||||||||||||||||||| |||||||||||||||  |||||||
Sbjct: 460 tcgccgtaccccagcacccagaagtcgtggccgtgcaggtgccacgggtgcgtctcgctg 519

                 
Query: 442 acgttg 447
            |||||
Sbjct: 520 tcgttg 525
>gb|BQ166623.1|BQ166623 WHE0906_E01_I02ZT Wheat 5-15 DAP spike cDNA library Triticum
           aestivum cDNA clone WHE0906_E01_I02, mRNA sequence
          Length = 628

 Score =  119 bits (60), Expect = 2e-025
 Identities = 115/132 (87%), Gaps = 1/132 (0%)
 Strand = Plus / Plus

                                                                       
Query: 203 cgcccatgccca-tgtggaggtgcggctcgatatggcagtggaaggcccacacgcccggg 261
           |||||||||||| ||||||||||||||||||| ||||||||||| |||||| |||||  |
Sbjct: 312 cgcccatgcccagtgtggaggtgcggctcgatgtggcagtggaacgcccacgcgcccacg 371

                                                                       
Query: 262 ttgtccgccacgaaccggagcatcgtccacccgtacggaaagatgaccgccgtgttccgc 321
           ||||| || |||||||||| |  ||||||||||| ||| || |  ||| |||||||||||
Sbjct: 372 ttgtcggcgacgaaccggatcgccgtccacccgtgcgggaacaacaccaccgtgttccgc 431

                       
Query: 322 agcggcgggtcc 333
           ||||||||||||
Sbjct: 432 agcggcgggtcc 443

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 382 tcgccgtagcccagcacccagaagtcgtggccgtggaggtgccacgggtgcacctcgctg 441
           |||||||| |||||||||   |||||||||||||| ||||| |||||||||  |||||||
Sbjct: 489 tcgccgtaccccagcaccagnaagtcgtggccgtgcaggtg-cacgggtgcgtctcgctg 547

                 
Query: 442 acgttg 447
            |||||
Sbjct: 548 tcgttg 553
>gb|BE606819.1|BE606819 WHE0906_E01_I02ZS Wheat 5-15 DAP spike cDNA library Triticum
           aestivum cDNA clone WHE0906_E01_I02, mRNA sequence
          Length = 315

 Score = 91.7 bits (46), Expect = 5e-017
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                       
Query: 382 tcgccgtagcccagcacccagaagtcgtggccgtggaggtgccacgggtgcacctcgctg 441
           |||||||| |||||||||||||||||||||||||| |||||||||||||||  |||||||
Sbjct: 306 tcgccgtaccccagcacccagaagtcgtggccgtgcaggtgccacgggtgcgtctcgctg 247

                 
Query: 442 acgttg 447
            |||||
Sbjct: 246 tcgttg 241
>gb|BQ240282.1|BQ240282 TaE05019F09R TaE05 Triticum aestivum cDNA clone TaE05019F09R, mRNA
           sequence
          Length = 500

 Score = 91.7 bits (46), Expect = 5e-017
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                       
Query: 382 tcgccgtagcccagcacccagaagtcgtggccgtggaggtgccacgggtgcacctcgctg 441
           |||||||| |||||||||||||||||||||||||| |||||||||||||||  |||||||
Sbjct: 479 tcgccgtaccccagcacccagaagtcgtggccgtgcaggtgccacgggtgcgtctcgctg 420

                 
Query: 442 acgttg 447
            |||||
Sbjct: 419 tcgttg 414
>gb|CD936892.1|CD936892 OV.105G14F010220 OV Triticum aestivum cDNA clone OV105G14, mRNA
           sequence
          Length = 662

 Score = 83.8 bits (42), Expect = 1e-014
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                       
Query: 201 gacgcccatgcccatgtggaggtgcggctcgatatggcagtggaaggcccacacgcccgg 260
           ||||||||||||||||  || ||||| |||||| ||||||||||||||||||||||| ||
Sbjct: 332 gacgcccatgcccatgaagaagtgcgcctcgatgtggcagtggaaggcccacacgccggg 273

                 
Query: 261 gttgtc 266
           ||||||
Sbjct: 272 gttgtc 267

 Score = 79.8 bits (40), Expect = 2e-013
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                       
Query: 399 ccagaagtcgtggccgtggaggtgccacgggtgcacctcgctgacgttgcgcgacagcgc 458
           |||||||||||||||||||||||||||||||||   |||||||  |||| ||| ||||  
Sbjct: 136 ccagaagtcgtggccgtggaggtgccacgggtgggtctcgctgttgttgggcgccagcat 77

                                   
Query: 459 gttggcgttctggagcagcacgtc 482
           |||||||||||| |||| ||||||
Sbjct: 76  gttggcgttctgcagcaccacgtc 53
>gb|BQ578381.1|BQ578381 WHE0302_C02_E04ZS Wheat unstressed seedling shoot cDNA library
           Triticum aestivum cDNA clone WHE0302_C02_E04, mRNA
           sequence
          Length = 574

 Score = 79.8 bits (40), Expect = 2e-013
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                       
Query: 399 ccagaagtcgtggccgtggaggtgccacgggtgcacctcgctgacgttgcgcgacagcgc 458
           |||||||||||||||||||||||||||||||||   |||||||  |||| ||| ||||  
Sbjct: 564 ccagaagtcgtggccgtggaggtgccacgggtgggtctcgctgttgttgggcgccagcat 505

                                   
Query: 459 gttggcgttctggagcagcacgtc 482
           |||||||||||| |||| ||||||
Sbjct: 504 gttggcgttctgcagcaccacgtc 481
>gb|BJ279341.1|BJ279341 BJ279341 Y. Ogihara unpublished cDNA library, Wh_r Triticum
           aestivum cDNA clone whr2i02 5', mRNA sequence
          Length = 599

 Score = 61.9 bits (31), Expect = 5e-008
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                              
Query: 382 tcgccgtagcccagcacccagaagtcgtggccgtggaggtgccacgggtgc 432
           ||||||||||| ||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 395 tcgccgtagccgagcacccagaagtcgtgcccatggagatgccatgggtgc 345
>gb|BQ743914.1|BQ743914 WHE4109_F08_K15ZS Wheat salt-stressed root cDNA library Triticum
           aestivum cDNA clone WHE4109_F08_K15, mRNA sequence
          Length = 692

 Score = 61.9 bits (31), Expect = 5e-008
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                              
Query: 382 tcgccgtagcccagcacccagaagtcgtggccgtggaggtgccacgggtgc 432
           ||||||| ||| ||||||||||||||||| || ||||| ||||||||||||
Sbjct: 576 tcgccgtggccgagcacccagaagtcgtgaccatggagatgccacgggtgc 526
>gb|CD491640.1|CD491640 WHE2851_E09_I17ZT CS wheat unstressed root tip cDNA library
           Triticum aestivum cDNA clone WHE2851_E09_I17, mRNA
           sequence
          Length = 629

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 249 ccacacgcccgggttgtccgccacgaa 275
           |||||| ||||||||||||||||||||
Sbjct: 322 ccacacccccgggttgtccgccacgaa 348
>gb|CV776321.1|CV776321 FGAS070725 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
           aestivum cDNA, mRNA sequence
          Length = 832

 Score = 44.1 bits (22), Expect = 0.011
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 43  gcatgcgcgcgaggcaaggcgc 64
           ||||||||||||||||||||||
Sbjct: 312 gcatgcgcgcgaggcaaggcgc 333
>gb|CD904146.1|CD904146 G356.112J16F010920 G356 Triticum aestivum cDNA clone G356112J16,
           mRNA sequence
          Length = 595

 Score = 40.1 bits (20), Expect = 0.18
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 360 ggcgtccccgcggtacgcgccgtc 383
           ||||||||||||| ||||||||||
Sbjct: 496 ggcgtccccgcggcacgcgccgtc 473
>gb|CD904147.1|CD904147 G356.112J16R011029 G356 Triticum aestivum cDNA clone G356112J16,
           mRNA sequence
          Length = 659

 Score = 40.1 bits (20), Expect = 0.18
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 360 ggcgtccccgcggtacgcgccgtc 383
           ||||||||||||| ||||||||||
Sbjct: 409 ggcgtccccgcggcacgcgccgtc 432
  Database: Triticum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  3:01 PM
  Number of letters in database: 367,240,239
  Number of sequences in database:  636,343
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 193,217
Number of Sequences: 636343
Number of extensions: 193217
Number of successful extensions: 55642
Number of sequences better than  0.5: 19
Number of HSP's better than  0.5 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55607
Number of HSP's gapped (non-prelim): 33
length of query: 616
length of database: 367,240,239
effective HSP length: 19
effective length of query: 597
effective length of database: 355,149,722
effective search space: 212024384034
effective search space used: 212024384034
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)