BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437629.2.2
(1041 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ258298.1|BJ258298 BJ258298 Y. Ogihara unpublished cDNA... 159 5e-037
gb|BJ266775.1|BJ266775 BJ266775 Y. Ogihara unpublished cDNA... 159 5e-037
gb|BJ307537.1|BJ307537 BJ307537 Y. Ogihara unpublished cDNA... 135 7e-030
gb|BQ294965.1|BQ294965 WHE2856_F10_K20ZS Wheat unstressed r... 127 2e-027
gb|CD868499.1|CD868499 AZO2.109B04F001114 AZO2 Triticum aes... 127 2e-027
gb|CD868500.1|CD868500 AZO2.109B04R010328 AZO2 Triticum aes... 127 2e-027
gb|CD907174.1|CD907174 G468.106C13F010810 G468 Triticum aes... 127 2e-027
gb|CN011621.1|CN011621 WHE3886_D10_H20ZS Wheat Fusarium gra... 127 2e-027
gb|CV759008.1|CV759008 FGAS053390 Triticum aestivum FGAS: L... 127 2e-027
gb|CF133714.1|CF133714 WHE4362_D10_H20ZT Wheat meiotic flor... 121 1e-025
gb|CV764611.1|CV764611 FGAS058996 Triticum aestivum FGAS: L... 119 4e-025
gb|CA610303.1|CA610303 wr1.pk0117.g11 wr1 Triticum aestivum... 109 4e-022
gb|CV779982.1|CV779982 FGAS074391 Triticum aestivum FGAS: L... 101 9e-020
gb|BJ268135.1|BJ268135 BJ268135 Y. Ogihara unpublished cDNA... 82 9e-014
gb|BJ273057.1|BJ273057 BJ273057 Y. Ogihara unpublished cDNA... 82 9e-014
gb|BJ276695.1|BJ276695 BJ276695 Y. Ogihara unpublished cDNA... 82 9e-014
gb|CD905162.1|CD905162 G468.100L17F010614 G468 Triticum aes... 70 3e-010
gb|CV768604.1|CV768604 FGAS062995 Triticum aestivum FGAS: L... 64 2e-008
gb|BQ170384.1|BQ170384 WHE1769_F09_L17ZT Wheat pre-anthesis... 60 3e-007
gb|CK202735.1|CK202735 FGAS011260 Triticum aestivum FGAS: L... 54 2e-005
gb|BM135157.1|BM135157 WHE0454_F04_F04ZS Wheat Fusarium gra... 46 0.005
gb|BJ214052.1|BJ214052 BJ214052 Y. Ogihara unpublished cDNA... 46 0.005
gb|BJ221532.1|BJ221532 BJ221532 Y. Ogihara unpublished cDNA... 46 0.005
gb|CA719172.1|CA719172 wkm2n.pk003.b11 wkm2n Triticum aesti... 46 0.005
gb|CA743035.1|CA743035 wri1s.pk002.e9 wri1s Triticum aestiv... 46 0.005
gb|CD900181.1|CD900181 G174.114L13F010824 G174 Triticum aes... 46 0.005
gb|BJ238234.1|BJ238234 BJ238234 Y. Ogihara unpublished cDNA... 44 0.019
gb|BJ301730.1|BJ301730 BJ301730 Y. Ogihara unpublished cDNA... 40 0.30
gb|CK203050.1|CK203050 FGAS011576 Triticum aestivum FGAS: L... 40 0.30
>gb|BJ258298.1|BJ258298 BJ258298 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6o11 5', mRNA sequence
Length = 648
Score = 159 bits (80), Expect = 5e-037
Identities = 134/152 (88%)
Strand = Plus / Plus
Query: 4 gcaataattcgtcatccacgaattggtgaatatgcatttggattcataacatcaacggtg 63
||||||||||| |||||||| |||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 478 gcaataattcggcatccacgtgttggtgaatacgcattcggatttataacatcaactgtt 537
Query: 64 gtccttcagactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcat 123
||||||||||| |||||||| || || ||| |||||||||| ||||||||||||||||||
Sbjct: 538 gtccttcagacagacaaaggtgatgaggaattgtgtagtgtttatgtgccaacaaatcat 597
Query: 124 ctgtacatcggtgatatatttctggtgaactc 155
|| || || ||||||||||||||| |||||||
Sbjct: 598 ctatatattggtgatatatttctgctgaactc 629
>gb|BJ266775.1|BJ266775 BJ266775 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh6o11 3', mRNA sequence
Length = 734
Score = 159 bits (80), Expect = 5e-037
Identities = 134/152 (88%)
Strand = Plus / Minus
Query: 4 gcaataattcgtcatccacgaattggtgaatatgcatttggattcataacatcaacggtg 63
||||||||||| |||||||| |||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 651 gcaataattcggcatccacgtgttggtgaatacgcattcggatttataacatcaactgtt 592
Query: 64 gtccttcagactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcat 123
||||||||||| |||||||| || || ||| |||||||||| ||||||||||||||||||
Sbjct: 591 gtccttcagacagacaaaggtgatgaggaattgtgtagtgtttatgtgccaacaaatcat 532
Query: 124 ctgtacatcggtgatatatttctggtgaactc 155
|| || || ||||||||||||||| |||||||
Sbjct: 531 ctatatattggtgatatatttctgctgaactc 500
Score = 54.0 bits (27), Expect = 2e-005
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 396 gaaataattgtttcaggagggatgaccatgcctcaggtgattgcatcactggagcccatg 455
||||| || ||||| ||||| ||||||||||| || || |||||||| || || |||||
Sbjct: 456 gaaattatcgtttctggaggaatgaccatgccacaagtaattgcatcgctagatcccatc 397
Query: 456 ccacggaaaagccagaacattcgtctaaatagaat 490
||| | || ||||||| ||| || |||||||||||
Sbjct: 396 ccaagaaagagccagagcatccgcctaaatagaat 362
>gb|BJ307537.1|BJ307537 BJ307537 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd11n24 3', mRNA sequence
Length = 708
Score = 135 bits (68), Expect = 7e-030
Identities = 113/128 (88%)
Strand = Plus / Minus
Query: 28 ggtgaatatgcatttggattcataacatcaacggtggtccttcagactgacaaaggcgac 87
|||||||| ||||| ||||| ||||||||||| || ||||||||||| |||||||| ||
Sbjct: 691 ggtgaatacgcattcggatttataacatcaactgttgtccttcagacagacaaaggtgat 632
Query: 88 gaagaactgtgtagtgtgtatgtgccaacaaatcatctgtacatcggtgatatatttctg 147
|| ||| |||||||||| |||||||||||||||||||| || || |||||||||||||||
Sbjct: 631 gaggaattgtgtagtgtttatgtgccaacaaatcatctatatattggtgatatatttctg 572
Query: 148 gtgaactc 155
|||||||
Sbjct: 571 ctgaactc 564
Score = 54.0 bits (27), Expect = 2e-005
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 396 gaaataattgtttcaggagggatgaccatgcctcaggtgattgcatcactggagcccatg 455
||||| || ||||| ||||| ||||||||||| || || |||||||| || || |||||
Sbjct: 520 gaaattatcgtttctggaggaatgaccatgccacaagtaattgcatcgctagatcccatc 461
Query: 456 ccacggaaaagccagaacattcgtctaaatagaat 490
||| | || ||||||| ||| || |||||||||||
Sbjct: 460 ccaagaaagagccagagcatccgcctaaatagaat 426
>gb|BQ294965.1|BQ294965 WHE2856_F10_K20ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2856_F10_K20, mRNA sequence
Length = 691
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 4 gcaataattcgtcatccacgaattggtgaatatgcatttggattcataacatcaacggtg 63
||||||||||| |||||||| | |||||||| || || ||||| ||||||||||| ||
Sbjct: 511 gcaataattcggcatccacgtgtcggtgaatacgccttcggatttataacatcaactgtt 570
Query: 64 gtccttcagactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcat 123
||||||||||| |||||||| || || ||| |||||||||| |||||||| |||||||||
Sbjct: 571 gtccttcagacagacaaaggtgatgaggaattgtgtagtgtttatgtgccgacaaatcat 630
Query: 124 ctgtacatcggtgatatatttctggtgaactc 155
|| || || ||||||||||| ||| |||||||
Sbjct: 631 ctatatattggtgatatattcctgctgaactc 662
>gb|CD868499.1|CD868499 AZO2.109B04F001114 AZO2 Triticum aestivum cDNA clone AZO2109B04,
mRNA sequence
Length = 570
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 4 gcaataattcgtcatccacgaattggtgaatatgcatttggattcataacatcaacggtg 63
||||||||||| |||||||| | |||||||| || || ||||| ||||||||||| ||
Sbjct: 161 gcaataattcggcatccacgtgtcggtgaatacgccttcggatttataacatcaactgtt 220
Query: 64 gtccttcagactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcat 123
||||||||||| |||||||| || || ||| |||||||||| |||||||| |||||||||
Sbjct: 221 gtccttcagacagacaaaggtgatgaggaattgtgtagtgtttatgtgccgacaaatcat 280
Query: 124 ctgtacatcggtgatatatttctggtgaactc 155
|| || || ||||||||||| ||| |||||||
Sbjct: 281 ctatatattggtgatatattcctgctgaactc 312
Score = 61.9 bits (31), Expect = 8e-008
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 396 gaaataattgtttcaggagggatgaccatgcctcaggtgattgcatcactggagcccatg 455
||||| || ||||| ||||| ||||||||||| || || |||||||| || || |||||
Sbjct: 356 gaaattatcgtttctggaggaatgaccatgccacaagtaattgcatcgctagatcccatc 415
Query: 456 ccacggaaaagccagaacattcgtctaaatagaat 490
||| |||| ||||||| ||| || |||||||||||
Sbjct: 416 ccaaggaagagccagagcatccgcctaaatagaat 450
>gb|CD868500.1|CD868500 AZO2.109B04R010328 AZO2 Triticum aestivum cDNA clone AZO2109B04,
mRNA sequence
Length = 708
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Minus
Query: 4 gcaataattcgtcatccacgaattggtgaatatgcatttggattcataacatcaacggtg 63
||||||||||| |||||||| | |||||||| || || ||||| ||||||||||| ||
Sbjct: 653 gcaataattcggcatccacgtgtcggtgaatacgccttcggatttataacatcaactgtt 594
Query: 64 gtccttcagactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcat 123
||||||||||| |||||||| || || ||| |||||||||| |||||||| |||||||||
Sbjct: 593 gtccttcagacagacaaaggtgatgaggaattgtgtagtgtttatgtgccgacaaatcat 534
Query: 124 ctgtacatcggtgatatatttctggtgaactc 155
|| || || ||||||||||| ||| |||||||
Sbjct: 533 ctatatattggtgatatattcctgctgaactc 502
Score = 61.9 bits (31), Expect = 8e-008
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 396 gaaataattgtttcaggagggatgaccatgcctcaggtgattgcatcactggagcccatg 455
||||| || ||||| ||||| ||||||||||| || || |||||||| || || |||||
Sbjct: 458 gaaattatcgtttctggaggaatgaccatgccacaagtaattgcatcgctagatcccatc 399
Query: 456 ccacggaaaagccagaacattcgtctaaatagaat 490
||| |||| ||||||| ||| || |||||||||||
Sbjct: 398 ccaaggaagagccagagcatccgcctaaatagaat 364
>gb|CD907174.1|CD907174 G468.106C13F010810 G468 Triticum aestivum cDNA clone G468106C13,
mRNA sequence
Length = 628
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 4 gcaataattcgtcatccacgaattggtgaatatgcatttggattcataacatcaacggtg 63
||||||||||| |||||||| | |||||||| || || ||||| ||||||||||| ||
Sbjct: 100 gcaataattcggcatccacgtgtcggtgaatacgccttcggatttataacatcaactgtt 159
Query: 64 gtccttcagactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcat 123
||||||||||| |||||||| || || ||| |||||||||| |||||||| |||||||||
Sbjct: 160 gtccttcagacagacaaaggtgatgaggaattgtgtagtgtttatgtgccgacaaatcat 219
Query: 124 ctgtacatcggtgatatatttctggtgaactc 155
|| || || ||||||||||| ||| |||||||
Sbjct: 220 ctatatattggtgatatattcctgctgaactc 251
Score = 61.9 bits (31), Expect = 8e-008
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 396 gaaataattgtttcaggagggatgaccatgcctcaggtgattgcatcactggagcccatg 455
||||| || ||||| ||||| ||||||||||| || || |||||||| || || |||||
Sbjct: 295 gaaattatcgtttctggaggaatgaccatgccacaagtaattgcatcgctagatcccatc 354
Query: 456 ccacggaaaagccagaacattcgtctaaatagaat 490
||| |||| ||||||| ||| || |||||||||||
Sbjct: 355 ccaaggaagagccagagcatccgcctaaatagaat 389
>gb|CN011621.1|CN011621 WHE3886_D10_H20ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3886_D10_H20,
mRNA sequence
Length = 632
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 4 gcaataattcgtcatccacgaattggtgaatatgcatttggattcataacatcaacggtg 63
||||||||||| |||||||| | |||||||| || || ||||| ||||||||||| ||
Sbjct: 246 gcaataattcggcatccacgtgtcggtgaatacgccttcggatttataacatcaactgtt 305
Query: 64 gtccttcagactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcat 123
||||||||||| |||||||| || || ||| |||||||||| |||||||| |||||||||
Sbjct: 306 gtccttcagacagacaaaggtgatgaggaattgtgtagtgtttatgtgccgacaaatcat 365
Query: 124 ctgtacatcggtgatatatttctggtgaactc 155
|| || || ||||||||||| ||| |||||||
Sbjct: 366 ctatatattggtgatatattcctgctgaactc 397
Score = 61.9 bits (31), Expect = 8e-008
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 396 gaaataattgtttcaggagggatgaccatgcctcaggtgattgcatcactggagcccatg 455
||||| || ||||| ||||| ||||||||||| || || |||||||| || || |||||
Sbjct: 441 gaaattatcgtttctggaggaatgaccatgccacaagtaattgcatcgctagatcccatc 500
Query: 456 ccacggaaaagccagaacattcgtctaaatagaat 490
||| |||| ||||||| ||| || |||||||||||
Sbjct: 501 ccaaggaagagccagagcatccgcctaaatagaat 535
>gb|CV759008.1|CV759008 FGAS053390 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 855
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 4 gcaataattcgtcatccacgaattggtgaatatgcatttggattcataacatcaacggtg 63
||||||||||| |||||||| |||| ||||| ||||| ||||| ||||||||||| ||
Sbjct: 643 gcaataattcggcatccacgtgttggggaatacgcattcggatttataacatcaactgtt 702
Query: 64 gtccttcagactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcat 123
||||||| ||| || ||||| || |||||| |||||||||| |||||||| |||||||||
Sbjct: 703 gtccttccgacagaaaaaggtgatgaagaattgtgtagtgtttatgtgcccacaaatcat 762
Query: 124 ctgtacatcggtgatatatttctggtgaactc 155
|| || || || |||||||||||| |||||||
Sbjct: 763 ctatatattggggatatatttctgctgaactc 794
>gb|CF133714.1|CF133714 WHE4362_D10_H20ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4362_D10_H20, mRNA sequence
Length = 761
Score = 121 bits (61), Expect = 1e-025
Identities = 112/129 (86%)
Strand = Plus / Plus
Query: 27 tggtgaatatgcatttggattcataacatcaacggtggtccttcagactgacaaaggcga 86
||||||||| |||||||| ||||||||||| | || | ||||||||||||||||| ||
Sbjct: 338 tggtgaatacgcatttgggttcataacatcgagcatgattcttcagactgacaaaggtga 397
Query: 87 cgaagaactgtgtagtgtgtatgtgccaacaaatcatctgtacatcggtgatatatttct 146
||||||||||||||||| ||||||||||| |||||||| || || |||||||| ||| |
Sbjct: 398 tgaagaactgtgtagtgtctatgtgccaaccaatcatctatatattggtgatatcttttt 457
Query: 147 ggtgaactc 155
|||||||||
Sbjct: 458 ggtgaactc 466
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 395 agaaataattgtttcaggagggatgaccatgcctcaggtgatt 437
|||||||||||| || ||||| ||||||||||| |||||||||
Sbjct: 509 agaaataattgtctctggaggaatgaccatgccgcaggtgatt 551
>gb|CV764611.1|CV764611 FGAS058996 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 119 bits (60), Expect = 4e-025
Identities = 122/143 (85%)
Strand = Plus / Plus
Query: 4 gcaataattcgtcatccacgaattggtgaatatgcatttggattcataacatcaacggtg 63
||||| ||||| |||||||| |||||||||||||||| ||||| ||||||||||| ||
Sbjct: 655 gcaattattcggcatccacgtgttggtgaatatgcattcggatttataacatcaactgtt 714
Query: 64 gtccttcagactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcat 123
||||||||||| |||||||| || || ||||||||||| || || ||||| |||||||||
Sbjct: 715 gtccttcagacagacaaaggtgatgaggaactgtgtagcgtttacgtgccnacaaatcat 774
Query: 124 ctgtacatcggtgatatatttct 146
|| || || ||||| || |||||
Sbjct: 775 ctatatattggtgacatctttct 797
>gb|CA610303.1|CA610303 wr1.pk0117.g11 wr1 Triticum aestivum cDNA clone wr1.pk0117.g11 5'
end, mRNA sequence
Length = 662
Score = 109 bits (55), Expect = 4e-022
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 4 gcaataattcgtcatccacgaattggtgaatatgcatttggattcataacatcaacggtg 63
||||| ||||| |||||||| |||||||||||||||| ||||| ||||||||||| ||
Sbjct: 95 gcaattattcggcatccacgtgttggtgaatatgcattcggatttataacatcaactgtt 154
Query: 64 gtccttcagactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaa 118
||||||||||| |||||||| || || ||||||||||| || || ||||||||||
Sbjct: 155 gtccttcagacagacaaaggtgatgaggaactgtgtagcgtttacgtgccaacaa 209
>gb|CV779982.1|CV779982 FGAS074391 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 841
Score = 101 bits (51), Expect = 9e-020
Identities = 87/99 (87%)
Strand = Plus / Plus
Query: 27 tggtgaatatgcatttggattcataacatcaacggtggtccttcagactgacaaaggcga 86
||||||||| |||||||||||||||||||| | || | ||||||||||||||||| ||
Sbjct: 681 tggtgaatacgcatttggattcataacatcgagcatgattcttcagactgacaaaggtga 740
Query: 87 cgaagaactgtgtagtgtgtatgtgccaacaaatcatct 125
||||||||||||||||| |||||| |||| ||||||||
Sbjct: 741 tgaagaactgtgtagtgtctatgtggcaaccaatcatct 779
>gb|BJ268135.1|BJ268135 BJ268135 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh15f12 5', mRNA sequence
Length = 630
Score = 81.8 bits (41), Expect = 9e-014
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 71 agactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcatctgtaca 130
||||||||||||| || |||||| |||||||||| ||||||||||| |||||||| || |
Sbjct: 537 agactgacaaaggtgatgaagaattgtgtagtgtctatgtgccaaccaatcatctatata 596
Query: 131 tcggtgatatatttctggtgaactc 155
| ||||||| ||| ||||||||||
Sbjct: 597 ttggtgatacctttttggtgaactc 621
>gb|BJ273057.1|BJ273057 BJ273057 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh15f12 3', mRNA sequence
Length = 522
Score = 81.8 bits (41), Expect = 9e-014
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 71 agactgacaaaggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcatctgtaca 130
||||||||||||| || |||||| |||||||||| ||||||||||| |||||||| || |
Sbjct: 124 agactgacaaaggtgatgaagaattgtgtagtgtctatgtgccaaccaatcatctatata 65
Query: 131 tcggtgatatatttctggtgaactc 155
| ||||||| ||| ||||||||||
Sbjct: 64 ttggtgatacctttttggtgaactc 40
>gb|BJ276695.1|BJ276695 BJ276695 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh1p20 3', mRNA sequence
Length = 586
Score = 81.8 bits (41), Expect = 9e-014
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 70 cagactgacaaa-ggcgacgaagaactgtgtagtgtgtatgtgccaacaaatcatctgta 128
|||||||||||| || || ||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 553 cagactgacaaaaggtgatgaagaactgtgtagtgtctatgtgccaaccaatcatctata 494
Query: 129 catcggtgatatatttctggtgaac 153
|| |||||||| ||| ||||||||
Sbjct: 493 tattggtgatatctttttggtgaac 469
Score = 60.0 bits (30), Expect = 3e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 395 agaaataattgtttcaggagggatgaccatgcctcaggtgat 436
||||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 423 agaaataattgtttctggaggaatgaccatgccacaggtgat 382
>gb|CD905162.1|CD905162 G468.100L17F010614 G468 Triticum aestivum cDNA clone G468100L17,
mRNA sequence
Length = 517
Score = 69.9 bits (35), Expect = 3e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 396 gaaataattgtttcaggagggatgaccatgcctcaggtgattgcatcactggagcccatg 455
||||| || ||||||||||| ||||||||||| ||||| |||||||| || || |||||
Sbjct: 81 gaaattatcgtttcaggaggaatgaccatgccacaggtaattgcatcgctagaccccatc 140
Query: 456 ccacggaaaagccagaacattcgtctaaatagaat 490
||| |||| ||||||| ||| || || ||||||||
Sbjct: 141 ccaaggaagagccagagcatccgcctgaatagaat 175
>gb|CV768604.1|CV768604 FGAS062995 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 63.9 bits (32), Expect = 2e-008
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 394 cagaaataattgtttcaggagggatgaccatgcctcaggtgatt 437
|||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 492 cagaaataattgtttctggaggaatgaccatgccacaggtgatt 535
>gb|BQ170384.1|BQ170384 WHE1769_F09_L17ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1769_F09_L17, mRNA sequence
Length = 484
Score = 60.0 bits (30), Expect = 3e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 396 gaaataattgtttcaggagggatgaccatgcctcaggtgatt 437
|||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 451 gaaataattgtttctggaggaatgaccatgccgcaggtgatt 410
>gb|CK202735.1|CK202735 FGAS011260 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 395 agaaataattgtttcaggagggatgaccatgcctcaggtgatt 437
|||||||||||| || ||||| ||||||||||| |||||||||
Sbjct: 182 agaaataattgtctctggaggaatgaccatgccgcaggtgatt 224
>gb|BM135157.1|BM135157 WHE0454_F04_F04ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0454_F04_F04,
mRNA sequence
Length = 460
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 catccacgaattggtgaatatgcatttggattcat 50
||||| || ||||| ||||||||||||||||||||
Sbjct: 332 catccccgtattggggaatatgcatttggattcat 366
>gb|BJ214052.1|BJ214052 BJ214052 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25j18 5', mRNA sequence
Length = 693
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 catccacgaattggtgaatatgcatttggattcat 50
||||| || ||||| ||||||||||||||||||||
Sbjct: 346 catcctcgtattggggaatatgcatttggattcat 380
>gb|BJ221532.1|BJ221532 BJ221532 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25j18 3', mRNA sequence
Length = 603
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 16 catccacgaattggtgaatatgcatttggattcat 50
||||| || ||||| ||||||||||||||||||||
Sbjct: 482 catcctcgtattggggaatatgcatttggattcat 448
>gb|CA719172.1|CA719172 wkm2n.pk003.b11 wkm2n Triticum aestivum cDNA clone wkm2n.pk003.b11
5' end, mRNA sequence
Length = 593
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 catccacgaattggtgaatatgcatttggattcat 50
||||| || ||||| ||||||||||||||||||||
Sbjct: 124 catcctcgtattggggaatatgcatttggattcat 158
>gb|CA743035.1|CA743035 wri1s.pk002.e9 wri1s Triticum aestivum cDNA clone wri1s.pk002.e9 5'
end, mRNA sequence
Length = 631
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 catccacgaattggtgaatatgcatttggattcat 50
||||| || ||||| ||||||||||||||||||||
Sbjct: 159 catcctcgtattggggaatatgcatttggattcat 193
>gb|CD900181.1|CD900181 G174.114L13F010824 G174 Triticum aestivum cDNA clone G174114L13,
mRNA sequence
Length = 703
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 16 catccacgaattggtgaatatgcatttggattcat 50
||||| || ||||| ||||||||||||||||||||
Sbjct: 153 catcctcgtattggggaatatgcatttggattcat 187
>gb|BJ238234.1|BJ238234 BJ238234 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe1b19 3', mRNA sequence
Length = 397
Score = 44.1 bits (22), Expect = 0.019
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 417 atgaccatgcctcaggtgattgcatcactggagcccatgccacggaaaagccagaacatt 476
||||||||||| || || |||||||| || || ||||| ||| | || ||||||| |||
Sbjct: 392 atgaccatgccacaagtaattgcatcgctagatcccatcccaagaaagagccagagcatc 333
Query: 477 cgtctaaatagaat 490
|| |||||||||||
Sbjct: 332 cgcctaaatagaat 319
>gb|BJ301730.1|BJ301730 BJ301730 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd11n24 5', mRNA sequence
Length = 621
Score = 40.1 bits (20), Expect = 0.30
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 4 gcaataattcgtcatccacgaattggtgaata 35
||||||||||| |||||||| ||||||||||
Sbjct: 589 gcaataattcggcatccacgtgttggtgaata 620
>gb|CK203050.1|CK203050 FGAS011576 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 40.1 bits (20), Expect = 0.30
Identities = 39/44 (88%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 395 agaaataattgtttcag-gagggatgaccatgcctcaggtgatt 437
|||||||||||| || | |||| ||||||||||| |||||||||
Sbjct: 183 agaaataattgtctctgngaggaatgaccatgccgcaggtgatt 226
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 156,110
Number of Sequences: 636343
Number of extensions: 156110
Number of successful extensions: 42739
Number of sequences better than 0.5: 29
Number of HSP's better than 0.5 without gapping: 28
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 42690
Number of HSP's gapped (non-prelim): 46
length of query: 1041
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1021
effective length of database: 354,513,379
effective search space: 361958159959
effective search space used: 361958159959
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)