BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418946.2.1
(690 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA617488.1|CA617488 wl1n.pk0020.b11 wl1n Triticum aestiv... 486 e-135
gb|CD902052.1|CD902052 G356.105M05F010918 G356 Triticum aes... 264 7e-069
gb|BE416009.1|BE416009 MUG003.D02R990623 ITEC MUG Wheat Spi... 256 2e-066
gb|BJ265301.1|BJ265301 BJ265301 Y. Ogihara unpublished cDNA... 248 4e-064
gb|BJ267676.1|BJ267676 BJ267676 Y. Ogihara unpublished cDNA... 248 4e-064
gb|BJ272623.1|BJ272623 BJ272623 Y. Ogihara unpublished cDNA... 248 4e-064
gb|DQ086484.1| Triticum aestivum putative 1,3-beta-glucan s... 246 2e-063
gb|CD927326.1|CD927326 GR45.101M21R010607 GR45 Triticum aes... 242 3e-062
gb|CD934561.1|CD934561 OV.001G12R001002 OV Triticum aestivu... 240 1e-061
gb|BJ259588.1|BJ259588 BJ259588 Y. Ogihara unpublished cDNA... 238 4e-061
gb|BQ236623.1|BQ236623 TaE05029A09F TaE05 Triticum aestivum... 226 2e-057
gb|BQ170786.1|BQ170786 WHE2305_E08_I15ZT Wheat pre-anthesis... 182 2e-044
gb|CA613808.1|CA613808 wr1.pk0157.a9 wr1 Triticum aestivum ... 170 8e-041
gb|CK154392.1|CK154392 FGAS033093 Triticum aestivum FGAS: T... 139 3e-031
gb|BQ905728.1|BQ905728 Ta04_17p23_R Ta04_AAFC_ECORC_Fusariu... 117 1e-024
gb|BF199676.1|BF199676 WHE0591-0594_I13_I13ZE Triticum mono... 103 2e-020
gb|BG607810.1|BG607810 WHE2487_G04_M07ZS Triticum monococcu... 103 2e-020
gb|BJ208630.1|BJ208630 BJ208630 Y. Ogihara unpublished cDNA... 100 2e-019
gb|DR432259.1|DR432259 441E-AH2 Line 441 epidermal library ... 98 1e-018
gb|CD927659.1|CD927659 GR45.102M21F010315 GR45 Triticum aes... 96 4e-018
gb|CK154616.1|CK154616 FGAS033318 Triticum aestivum FGAS: T... 96 4e-018
gb|CA612946.1|CA612946 wr1.pk0149.f7 wr1 Triticum aestivum ... 90 2e-016
gb|CA612893.1|CA612893 wr1.pk0160.a2 wr1 Triticum aestivum ... 74 1e-011
gb|CK153351.1|CK153351 FGAS031946 Triticum aestivum FGAS: T... 74 1e-011
gb|CV768769.1|CV768769 FGAS063160 Triticum aestivum FGAS: L... 74 1e-011
gb|CD490322.1|CD490322 WHE2494_D06_H12ZT Triticum monococcu... 72 6e-011
gb|CK207448.1|CK207448 FGAS019071 Triticum aestivum FGAS: L... 66 3e-009
gb|BJ273587.1|BJ273587 BJ273587 Y. Ogihara unpublished cDNA... 62 5e-008
gb|CK154494.1|CK154494 FGAS033196 Triticum aestivum FGAS: T... 62 5e-008
gb|BJ211685.1|BJ211685 BJ211685 Y. Ogihara unpublished cDNA... 60 2e-007
gb|BG607488.1|BG607488 WHE2494_D06_H12ZS Triticum monococcu... 58 8e-007
gb|BE492039.1|BE492039 WHE0552_B02_B02ZE Triticum monococcu... 56 3e-006
gb|BQ904431.1|BQ904431 Ta04_03h09_R Ta04_AAFC_ECORC_Fusariu... 56 3e-006
gb|CL902396.1|CL902396 CSHC1771 1639HC library Triticum aes... 50 2e-004
gb|BE428096.1|BE428096 MTD003.C04F990615 ITEC MTD Durum Whe... 50 2e-004
gb|BJ274419.1|BJ274419 BJ274419 Y. Ogihara unpublished cDNA... 50 2e-004
gb|AL820316.1|AL820316 AL820316 N:130 Triticum aestivum cDN... 50 2e-004
gb|CA499643.1|CA499643 WHE4009_G12_M23ZT Wheat meiotic anth... 50 2e-004
gb|CA660459.1|CA660459 wlm1.pk0019.f4 wlm1 Triticum aestivu... 50 2e-004
gb|CA667704.1|CA667704 wlsu1.pk017.p1 wlsu1 Triticum aestiv... 50 2e-004
gb|CA668899.1|CA668899 wlsu1.pk023.i2 wlsu1 Triticum aestiv... 50 2e-004
gb|CD452820.1|CD452820 WHE1132_C10_F20ZT CS wheat etiolated... 50 2e-004
gb|CD454191.1|CD454191 WHE0991-0994_B23_B23ZT CS wheat pre-... 50 2e-004
gb|CD938994.1|CD938994 OV.111N14F010309 OV Triticum aestivu... 50 2e-004
gb|DQ086487.1| Triticum aestivum putative 1,3-beta-glucan s... 50 2e-004
gb|BJ273393.1|BJ273393 BJ273393 Y. Ogihara unpublished cDNA... 46 0.003
gb|CA650294.1|CA650294 wre1n.pk0150.g10 wre1n Triticum aest... 46 0.003
gb|CA667480.1|CA667480 wlsu1.pk015.b6 wlsu1 Triticum aestiv... 46 0.003
gb|CA669387.1|CA669387 wlsu1.pk022.h13 wlsu1 Triticum aesti... 46 0.003
gb|CA670118.1|CA670118 wlsu1.pk025.m7 wlsu1 Triticum aestiv... 46 0.003
gb|CD918312.1|CD918312 G608.108N24F010907 G608 Triticum aes... 46 0.003
gb|CA684308.1|CA684308 wlm96.pk025.c20 wlm96 Triticum aesti... 42 0.050
gb|CA687192.1|CA687192 wlm96.pk035.c5 wlm96 Triticum aestiv... 42 0.050
gb|CA699031.1|CA699031 wlk8.pk0011.h6 wlk8 Triticum aestivu... 42 0.050
gb|BE423747.1|BE423747 WHE0073_B01_D01ZS Wheat endosperm cD... 40 0.20
gb|BG904545.1|BG904545 TaLr1133A08R TaLr1 Triticum aestivum... 40 0.20
gb|BG905304.1|BG905304 TaLr1138G06R TaLr1 Triticum aestivum... 40 0.20
gb|BG906794.1|BG906794 TaLr1152F10R TaLr1 Triticum aestivum... 40 0.20
gb|BG908987.1|BG908987 TaLr1172H05R TaLr1 Triticum aestivum... 40 0.20
gb|CA691504.1|CA691504 wlm96.pk053.l7 wlm96 Triticum aestiv... 40 0.20
>gb|CA617488.1|CA617488 wl1n.pk0020.b11 wl1n Triticum aestivum cDNA clone wl1n.pk0020.b11
5' end, mRNA sequence
Length = 591
Score = 486 bits (245), Expect = e-135
Identities = 272/277 (98%), Gaps = 3/277 (1%)
Strand = Plus / Plus
Query: 14 cagccatcgtggtaatcctaatagcgatccctggcatgacggtgctggacatatttgttt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 cagccatcgtggtaatcctaatagcgatccctggcatgacggtgctggacatatttgttt 196
Query: 74 gcatccttgctttcatgcccactggatggggtttgctgctgattgcccaagcgatccggc 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gcatccttgctttcatgcccactggatggggtttgctgctgattgcccaagcgatccggc 256
Query: 134 ctgtgatccacaagactgggctctggggctcgatcaaggctcttgcccggggctacgaga 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ctgtgatccacaagactgggctctggggctcgatcaaggctcttgcccggggctacgaga 316
Query: 194 tcctgatgggacttctcctgttcacgcccatcgccttcctcgcctggttcccgttcgtgt 253
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 317 tcctgatgggacttctcctgttcacgcccatcg-cttcctcgcctggttcccgttcgtgt 375
Query: 254 cggaattccagaccaggatgctgttcaaccaggcgtt 290
||||||| |||| || ||||||||||||| |||||||
Sbjct: 376 cggaatt-caga-caagatgctgttcaacaaggcgtt 410
>gb|CD902052.1|CD902052 G356.105M05F010918 G356 Triticum aestivum cDNA clone G356105M05,
mRNA sequence
Length = 525
Score = 264 bits (133), Expect = 7e-069
Identities = 265/309 (85%)
Strand = Plus / Plus
Query: 48 catgacggtgctggacatatttgtttgcatccttgctttcatgcccactggatggggttt 107
|||||| || || ||||| || || |||||||| || |||||||| ||||||||||| |
Sbjct: 206 catgacagtccttgacatcttcgtctgcatcctcgccttcatgccgactggatggggcct 265
Query: 108 gctgctgattgcccaagcgatccggcctgtgatccacaagactgggctctggggctcgat 167
||| |||||||||||||||||| |||||| | | | | ||||| ||||| ||| |
Sbjct: 266 gcttctgattgcccaagcgatcaagcctgtcgttgagatggtcgggctgtgggggtcggt 325
Query: 168 caaggctcttgcccggggctacgagatcctgatgggacttctcctgttcacgcccatcgc 227
||||| || |||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 326 gaaggccctcgcccggggctacgagatcctgatggggctcctgctgttcacgcccatcgc 385
Query: 228 cttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggc 287
|||||||| ||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 386 gttcctcgcgtggttcccgttcgtgtccgagttccagaccaggatgctcttcaaccaggc 445
Query: 288 gttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaagaccgagggac 347
|||||||||||| |||||||||||||||||||| || || |||||||| ||||||| ||
Sbjct: 446 gttcagcagaggcctgcagatctcccgtatcctcggcgggcacaagaaggaccgagccac 505
Query: 348 ccggaacaa 356
|||||||||
Sbjct: 506 ccggaacaa 514
>gb|BE416009.1|BE416009 MUG003.D02R990623 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG003.D02, mRNA sequence
Length = 600
Score = 256 bits (129), Expect = 2e-066
Identities = 264/309 (85%)
Strand = Plus / Plus
Query: 48 catgacggtgctggacatatttgtttgcatccttgctttcatgcccactggatggggttt 107
|||||| || || ||||| || || |||||||| || |||||||| ||||||||||| |
Sbjct: 13 catgacagtccttgacatcttcgtctgcatcctcgccttcatgccgactggatggggcct 72
Query: 108 gctgctgattgcccaagcgatccggcctgtgatccacaagactgggctctggggctcgat 167
||| |||||||||||||||||| |||||| || | | | ||||| ||||| ||| |
Sbjct: 73 gcttctgattgcccaagcgatcaagcctgtcgtcgagatggtcgggctgtgggggtcggt 132
Query: 168 caaggctcttgcccggggctacgagatcctgatgggacttctcctgttcacgcccatcgc 227
|||||||| |||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 133 gaaggctctcgcccggggctacgagatcctgatggggctcctgctgttcacgcccatcgc 192
Query: 228 cttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggc 287
||||| || |||||||| || ||||| || ||||||||||||||||| |||||||||||
Sbjct: 193 gttccttgcgtggttcccctttgtgtccgagttccagaccaggatgcttttcaaccaggc 252
Query: 288 gttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaagaccgagggac 347
|||||||||||| |||||||||||||||||||| || || |||||||| ||||||| ||
Sbjct: 253 gttcagcagaggcctgcagatctcccgtatcctcggcggccacaagaaggaccgagccac 312
Query: 348 ccggaacaa 356
|||||||||
Sbjct: 313 ccggaacaa 321
>gb|BJ265301.1|BJ265301 BJ265301 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21h03 3', mRNA sequence
Length = 686
Score = 248 bits (125), Expect = 4e-064
Identities = 263/309 (85%)
Strand = Plus / Minus
Query: 48 catgacggtgctggacatatttgtttgcatccttgctttcatgcccactggatggggttt 107
|||||| || || ||||| || || |||||||| || |||||||| ||||||||||| ||
Sbjct: 631 catgacagtccttgacatcttcgtctgcatcctcgccttcatgccaactggatggggctt 572
Query: 108 gctgctgattgcccaagcgatccggcctgtgatccacaagactgggctctggggctcgat 167
||| |||||||||||||||||| ||||||| || | | | ||||| ||||| || |
Sbjct: 571 gcttctgattgcccaagcgatcaagcctgtggtcgagatggtcgggctgtgggggtctgt 512
Query: 168 caaggctcttgcccggggctacgagatcctgatgggacttctcctgttcacgcccatcgc 227
|||||||| ||||| ||||||||||| || ||||| || || |||||||||||||||||
Sbjct: 511 gaaggctctcgcccgtggctacgagattctcatggggctcctgctgttcacgcccatcgc 452
Query: 228 cttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggc 287
|| ||||| |||||||| |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 451 gtttctcgcgtggttccccttcgtgtccgagttccagaccaggatgctcttcaaccaggc 392
Query: 288 gttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaagaccgagggac 347
|||||||||||| |||||||||||||||||||| || || |||||||| ||||||| ||
Sbjct: 391 gttcagcagaggcctgcagatctcccgtatcctcggcggccacaagaaggaccgagccac 332
Query: 348 ccggaacaa 356
|||||||||
Sbjct: 331 ccggaacaa 323
>gb|BJ267676.1|BJ267676 BJ267676 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh12m05 5', mRNA sequence
Length = 633
Score = 248 bits (125), Expect = 4e-064
Identities = 263/309 (85%)
Strand = Plus / Plus
Query: 48 catgacggtgctggacatatttgtttgcatccttgctttcatgcccactggatggggttt 107
|||||| || || ||||| || || |||||||| || |||||||| ||||||||||| ||
Sbjct: 120 catgacagtccttgacatcttcgtctgcatcctcgccttcatgccaactggatggggctt 179
Query: 108 gctgctgattgcccaagcgatccggcctgtgatccacaagactgggctctggggctcgat 167
||| |||||||||||||||||| ||||||| || | | | ||||| ||||| || |
Sbjct: 180 gcttctgattgcccaagcgatcaagcctgtggtcgagatggtcgggctgtgggggtctgt 239
Query: 168 caaggctcttgcccggggctacgagatcctgatgggacttctcctgttcacgcccatcgc 227
|||||||| ||||| ||||||||||| || ||||| || || |||||||||||||||||
Sbjct: 240 gaaggctctcgcccgtggctacgagattctcatggggctcctgctgttcacgcccatcgc 299
Query: 228 cttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggc 287
|| ||||| |||||||| |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 300 gtttctcgcgtggttccccttcgtgtccgagttccagaccaggatgctcttcaaccaggc 359
Query: 288 gttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaagaccgagggac 347
|||||||||||| |||||||||||||||||||| || || |||||||| ||||||| ||
Sbjct: 360 gttcagcagaggcctgcagatctcccgtatcctcggcggccacaagaaggaccgagccac 419
Query: 348 ccggaacaa 356
|||||||||
Sbjct: 420 ccggaacaa 428
>gb|BJ272623.1|BJ272623 BJ272623 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh12m05 3', mRNA sequence
Length = 678
Score = 248 bits (125), Expect = 4e-064
Identities = 263/309 (85%)
Strand = Plus / Minus
Query: 48 catgacggtgctggacatatttgtttgcatccttgctttcatgcccactggatggggttt 107
|||||| || || ||||| || || |||||||| || |||||||| ||||||||||| ||
Sbjct: 639 catgacagtccttgacatcttcgtctgcatcctcgccttcatgccaactggatggggctt 580
Query: 108 gctgctgattgcccaagcgatccggcctgtgatccacaagactgggctctggggctcgat 167
||| |||||||||||||||||| ||||||| || | | | ||||| ||||| || |
Sbjct: 579 gcttctgattgcccaagcgatcaagcctgtggtcgagatggtcgggctgtgggggtctgt 520
Query: 168 caaggctcttgcccggggctacgagatcctgatgggacttctcctgttcacgcccatcgc 227
|||||||| ||||| ||||||||||| || ||||| || || |||||||||||||||||
Sbjct: 519 gaaggctctcgcccgtggctacgagattctcatggggctcctgctgttcacgcccatcgc 460
Query: 228 cttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggc 287
|| ||||| |||||||| |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 459 gtttctcgcgtggttccccttcgtgtccgagttccagaccaggatgctcttcaaccaggc 400
Query: 288 gttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaagaccgagggac 347
|||||||||||| |||||||||||||||||||| || || |||||||| ||||||| ||
Sbjct: 399 gttcagcagaggcctgcagatctcccgtatcctcggcggccacaagaaggaccgagccac 340
Query: 348 ccggaacaa 356
|||||||||
Sbjct: 339 ccggaacaa 331
>gb|DQ086484.1| Triticum aestivum putative 1,3-beta-glucan synthase 3 (GSL3) mRNA,
partial cds
Length = 481
Score = 246 bits (124), Expect = 2e-063
Identities = 253/296 (85%)
Strand = Plus / Plus
Query: 48 catgacggtgctggacatatttgtttgcatccttgctttcatgcccactggatggggttt 107
|||||| || || ||||| || || |||||||| || |||||||| ||||||||||| |
Sbjct: 179 catgacagtccttgacatcttcgtctgcatcctcgccttcatgccgactggatggggcct 238
Query: 108 gctgctgattgcccaagcgatccggcctgtgatccacaagactgggctctggggctcgat 167
||| |||||||||||||||||| |||||| || | | | ||||| ||||| ||| |
Sbjct: 239 gcttctgattgcccaagcgatcaagcctgtcgtcgagatggtcgggctgtgggggtcggt 298
Query: 168 caaggctcttgcccggggctacgagatcctgatgggacttctcctgttcacgcccatcgc 227
|||||||| |||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 299 gaaggctctcgcccggggctacgagatcctgatggggctcctgctgttcacgcccatcgc 358
Query: 228 cttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggc 287
||||| || |||||||| || ||||| || ||||||||||||||||| |||||||||||
Sbjct: 359 gttccttgcgtggttcccctttgtgtccgagttccagaccaggatgcttttcaaccaggc 418
Query: 288 gttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaagaccgag 343
|||||||||||| |||||||||||||||||||| || || |||||||| |||||||
Sbjct: 419 gttcagcagaggcctgcagatctcccgtatcctcggcggccacaagaaggaccgag 474
>gb|CD927326.1|CD927326 GR45.101M21R010607 GR45 Triticum aestivum cDNA clone GR45101M21,
mRNA sequence
Length = 567
Score = 242 bits (122), Expect = 3e-062
Identities = 185/206 (89%)
Strand = Plus / Minus
Query: 151 gggctctggggctcgatcaaggctcttgcccggggctacgagatcctgatgggacttctc 210
||||| ||||| ||| | ||||| || |||||||||||||||||||||||||| || ||
Sbjct: 532 gggctgtggggttcggtgaaggccctcgcccggggctacgagatcctgatggggctcctg 473
Query: 211 ctgttcacgcccatcgccttcctcgcctggttcccgttcgtgtcggaattccagaccagg 270
||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 472 ctgttcacgcccatcgcgttcctcgcgtggttcccgttcgtgtccgagttccagaccagg 413
Query: 271 atgctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgggaggacac 330
||||| ||||||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 412 atgctcttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcgggcac 353
Query: 331 aagaaagaccgagggacccggaacaa 356
||||| ||||||| |||||||||||
Sbjct: 352 aagaaggaccgagccacccggaacaa 327
>gb|CD934561.1|CD934561 OV.001G12R001002 OV Triticum aestivum cDNA clone OV001G12, mRNA
sequence
Length = 730
Score = 240 bits (121), Expect = 1e-061
Identities = 262/309 (84%)
Strand = Plus / Minus
Query: 48 catgacggtgctggacatatttgtttgcatccttgctttcatgcccactggatggggttt 107
|||||| || || ||||| || || |||||||| || |||||||| ||||||||||| ||
Sbjct: 696 catgacagtccttgacatcttcgtctgcatcctcgccttcatgccaactggatggggctt 637
Query: 108 gctgctgattgcccaagcgatccggcctgtgatccacaagactgggctctggggctcgat 167
||| |||||||||||||||||| ||||||| || | | | ||||| ||||| || |
Sbjct: 636 gcttctgattgcccaagcgatcaagcctgtggtcgagatggtcgggctgtgggggtctgt 577
Query: 168 caaggctcttgcccggggctacgagatcctgatgggacttctcctgttcacgcccatcgc 227
|||||||| ||||| ||||||||||| || ||||| || || |||||||||||||||||
Sbjct: 576 gaaggctctcgcccgtggctacgagattctcatggggctcctgctgttcacgcccatcgc 517
Query: 228 cttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggc 287
|| ||||| |||||||| |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 516 gtttctcgcgtggttccccttcgtgtccgagttccagaccaggatgctcttcaaccaggc 457
Query: 288 gttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaagaccgagggac 347
|||||||| ||| |||||||||||||||||||| || || |||||||| ||||||| ||
Sbjct: 456 gttcagcaaaggcctgcagatctcccgtatcctcggcggccacaagaaggaccgagccac 397
Query: 348 ccggaacaa 356
|||||||||
Sbjct: 396 ccggaacaa 388
>gb|BJ259588.1|BJ259588 BJ259588 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21h03 5', mRNA sequence
Length = 527
Score = 238 bits (120), Expect = 4e-061
Identities = 252/296 (85%)
Strand = Plus / Plus
Query: 48 catgacggtgctggacatatttgtttgcatccttgctttcatgcccactggatggggttt 107
|||||| || || ||||| || || |||||||| || |||||||| ||||||||||| ||
Sbjct: 225 catgacagtccttgacatcttcgtctgcatcctcgccttcatgccaactggatggggctt 284
Query: 108 gctgctgattgcccaagcgatccggcctgtgatccacaagactgggctctggggctcgat 167
||| |||||||||||||||||| ||||||| || | | | ||||| ||||| || |
Sbjct: 285 gcttctgattgcccaagcgatcaagcctgtggtcgagatggtcgggctgtgggggtctgt 344
Query: 168 caaggctcttgcccggggctacgagatcctgatgggacttctcctgttcacgcccatcgc 227
|||||||| ||||| ||||||||||| || ||||| || || |||||||||||||||||
Sbjct: 345 gaaggctctcgcccgtggctacgagattctcatggggctcctgctgttcacgcccatcgc 404
Query: 228 cttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggc 287
|| ||||| |||||||| |||||||| || ||||||||||||||||| |||||||||||
Sbjct: 405 gtttctcgcgtggttccccttcgtgtccgagttccagaccaggatgctcttcaaccaggc 464
Query: 288 gttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaagaccgag 343
|||||||||||| |||||||||||||||||||| || || |||||||| |||||||
Sbjct: 465 gttcagcagaggcctgcagatctcccgtatcctcggcggccacaagaaggaccgag 520
>gb|BQ236623.1|BQ236623 TaE05029A09F TaE05 Triticum aestivum cDNA clone TaE05029A09F, mRNA
sequence
Length = 587
Score = 226 bits (114), Expect = 2e-057
Identities = 183/206 (88%)
Strand = Plus / Minus
Query: 151 gggctctggggctcgatcaaggctcttgcccggggctacgagatcctgatgggacttctc 210
||||| ||||| ||| | |||||||| |||||||||||||||||||||||||| || ||
Sbjct: 582 gggctgtgggggtcggtgaaggctctcgcccggggctacgagatcctgatggggctcctg 523
Query: 211 ctgttcacgcccatcgccttcctcgcctggttcccgttcgtgtcggaattccagaccagg 270
||||||||||||||||| ||||| || |||||||| || ||||| || ||||||||||||
Sbjct: 522 ctgttcacgcccatcgcgttccttgcgtggttcccctttgtgtccgagttccagaccagg 463
Query: 271 atgctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgggaggacac 330
||||| ||||||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 462 atgcttttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcggccac 403
Query: 331 aagaaagaccgagggacccggaacaa 356
||||| ||||||| |||||||||||
Sbjct: 402 aagaaggaccgagccacccggaacaa 377
>gb|BQ170786.1|BQ170786 WHE2305_E08_I15ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2305_E08_I15, mRNA sequence
Length = 534
Score = 182 bits (92), Expect = 2e-044
Identities = 128/140 (91%)
Strand = Plus / Minus
Query: 217 acgcccatcgccttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctg 276
||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 534 acgcccatcgcgttcctcgcgtggttcccgttcgtgtccgagttccagaccaggatgctc 475
Query: 277 ttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaa 336
||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 474 ttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcgggcacaagaag 415
Query: 337 gaccgagggacccggaacaa 356
||||||| |||||||||||
Sbjct: 414 gaccgagccacccggaacaa 395
>gb|CA613808.1|CA613808 wr1.pk0157.a9 wr1 Triticum aestivum cDNA clone wr1.pk0157.a9 5'
end, mRNA sequence
Length = 404
Score = 170 bits (86), Expect = 8e-041
Identities = 131/146 (89%)
Strand = Plus / Plus
Query: 211 ctgttcacgcccatcgccttcctcgcctggttcccgttcgtgtcggaattccagaccagg 270
||||||||||||||||| ||||| || |||||||| || ||||| || ||||||||||||
Sbjct: 12 ctgttcacgcccatcgcgttccttgcgtggttcccctttgtgtccgagttccagaccagg 71
Query: 271 atgctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgggaggacac 330
||||| ||||||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 72 atgcttttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcggccac 131
Query: 331 aagaaagaccgagggacccggaacaa 356
||||| ||||||| |||||||||||
Sbjct: 132 aagaaggaccgagccacccggaacaa 157
>gb|CK154392.1|CK154392 FGAS033093 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 931
Score = 139 bits (70), Expect = 3e-031
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 211 ctgttcacgcccatcgccttcctcgcctggttcccgttcgtgtcggaattccagaccagg 270
||||||||||||||||| || ||||| |||||||| |||||||| || ||||||||||||
Sbjct: 734 ctgttcacgcccatcgcgtttctcgcgtggttcccnttcgtgtccgagttccagaccagg 675
Query: 271 atgctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcct 320
||||| |||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 674 atgctcntcaaccaggcgttcagcagaggcntgcagatctccngtatcct 625
>gb|BQ905728.1|BQ905728 Ta04_17p23_R
Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_17p23, mRNA
sequence
Length = 351
Score = 117 bits (59), Expect = 1e-024
Identities = 101/117 (86%)
Strand = Plus / Minus
Query: 240 gttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggcgttcagcagagg 299
|||||| || ||||| || | ||||||||||||||| |||||||||||||||| |||||
Sbjct: 348 gttcccctttgtgtccgagtwccagaccaggatgcttrtcaaccaggcgttcagmagagg 289
Query: 300 tctgcagatctcccgtatcctgggaggacacaagaaagaccgagggacccggaacaa 356
|||||||| ||||||||||| || || |||||||| ||||||| |||||||||||
Sbjct: 288 cctgcagatmtcccgtatcctcggcggccacaagaaggaccgagccacccggaacaa 232
>gb|BF199676.1|BF199676 WHE0591-0594_I13_I13ZE Triticum monococcum vegetative apex cDNA
library Triticum monococcum cDNA clone
WHE0591-0594_I13_I13, mRNA sequence
Length = 380
Score = 103 bits (52), Expect = 2e-020
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 277 ttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaa 336
||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 4 ttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcggccacaagaag 63
Query: 337 gaccgagggacccggaacaa 356
||||||| |||||||||||
Sbjct: 64 gaccgagccacccggaacaa 83
>gb|BG607810.1|BG607810 WHE2487_G04_M07ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2487_G04_M07,
mRNA sequence
Length = 480
Score = 103 bits (52), Expect = 2e-020
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 277 ttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaa 336
||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 4 ttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcggccacaagaag 63
Query: 337 gaccgagggacccggaacaa 356
||||||| |||||||||||
Sbjct: 64 gaccgagccacccggaacaa 83
>gb|BJ208630.1|BJ208630 BJ208630 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh10a17 5', mRNA sequence
Length = 451
Score = 99.6 bits (50), Expect = 2e-019
Identities = 104/122 (85%)
Strand = Plus / Plus
Query: 187 tacgagatcctgatgggacttctcctgttcacgcccatcgccttcctcgcctggttcccg 246
||||||||| | ||||| || || || ||||| || ||||| ||||| || |||||||||
Sbjct: 330 tacgagatcatcatggggctgctgctcttcaccccgatcgcgttcctggcgtggttcccg 389
Query: 247 ttcgtgtcggaattccagaccaggatgctgttcaaccaggcgttcagcagaggtctgcag 306
||||||||||| ||||||||| ||||||| ||||||||||| |||||| | || ||||||
Sbjct: 390 ttcgtgtcggagttccagacccggatgctcttcaaccaggccttcagccgtgggctgcag 449
Query: 307 at 308
||
Sbjct: 450 at 451
>gb|DR432259.1|DR432259 441E-AH2 Line 441 epidermal library Triticum monococcum cDNA, mRNA
sequence
Length = 649
Score = 97.6 bits (49), Expect = 1e-018
Identities = 125/149 (83%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 187 tacgagatcctgatgggacttctcctgttcacgcccatcgccttcctcgcctggttcccg 246
||||||||| | ||||| || || || ||||| || ||||| ||||| || |||||||||
Sbjct: 411 tacgagatcatcatggggctgctgctcttcaccccgatcgcgttcctggcgtggttcccg 470
Query: 247 ttcgtgtcggaattccagaccaggatgctgttcaaccaggcgttcagcagaggtctgcag 306
|||||||| || ||||||||| ||||||| ||||||||||| |||||| | || ||||||
Sbjct: 471 ttcgtgtctgagttccagacc-ggatgctcttcaaccaggccttcagccgtgggctgcag 529
Query: 307 atctcccgtatcctgggaggacacaagaa 335
||||| | |||||||| || ||||||||
Sbjct: 530 atctcgaggatcctgggcgggcacaagaa 558
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 60 ggacatatttgtttgcatccttgctttcatgcccactggatgggg 104
|||||||||||| |||||||| || |||||||| || ||||||||
Sbjct: 284 ggacatatttgtctgcatcctcgccttcatgccgacgggatgggg 328
>gb|CD927659.1|CD927659 GR45.102M21F010315 GR45 Triticum aestivum cDNA clone GR45102M21,
mRNA sequence
Length = 706
Score = 95.6 bits (48), Expect = 4e-018
Identities = 144/176 (81%)
Strand = Plus / Plus
Query: 48 catgacggtgctggacatatttgtttgcatccttgctttcatgcccactggatggggttt 107
|||||| || || ||||| || || |||||||| || |||||||| ||||||||||| |
Sbjct: 531 catgacagtccttgacatcttcgtctgcatcctcgccttcatgccgactggatggggcct 590
Query: 108 gctgctgattgcccaagcgatccggcctgtgatccacaagactgggctctggggctcgat 167
||| |||||||||||||||||| |||||| | | | | ||||| ||||| ||| |
Sbjct: 591 gcttctgattgcccaagcgatcaagcctgtcgttgagatggtcgggctgtgggggtcggt 650
Query: 168 caaggctcttgcccggggctacgagatcctgatgggacttctcctgttcacgccca 223
||||| || |||||||||||||||||||||||||| || || |||||||||||||
Sbjct: 651 gaaggccctcgcccggggctacgagatcctgatggggctcctgctgttcacgccca 706
>gb|CK154616.1|CK154616 FGAS033318 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 847
Score = 95.6 bits (48), Expect = 4e-018
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 260 tccagaccaggatgctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatc 318
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 686 tccagaccaggatgctcntcaaccaggcgttcagcagaggcctgcagatctcccgtatc 628
>gb|CA612946.1|CA612946 wr1.pk0149.f7 wr1 Triticum aestivum cDNA clone wr1.pk0149.f7 5'
end, mRNA sequence
Length = 495
Score = 89.7 bits (45), Expect = 2e-016
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 238 tggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggcgttcagcaga 297
|||||||| ||||| || || |||||||| ||||||||||||||||||||||||| |||
Sbjct: 61 tggttccccttcgtctccgagttccagacgcggatgctgttcaaccaggcgttcagtaga 120
Query: 298 ggtctgcagatctcccg 314
||||||||||| |||||
Sbjct: 121 ggtctgcagatttcccg 137
>gb|CA612893.1|CA612893 wr1.pk0160.a2 wr1 Triticum aestivum cDNA clone wr1.pk0160.a2 5'
end, mRNA sequence
Length = 691
Score = 73.8 bits (37), Expect = 1e-011
Identities = 178/220 (80%), Gaps = 4/220 (1%)
Strand = Plus / Plus
Query: 48 catgacggtgctggacatatttgtttgcatccttgctttcatgcccactgg-atggggtt 106
|||||| || || ||||| || || |||||||| || |||||||| ||||| ||||||
Sbjct: 252 catgacagtccttgacatcttcgtctgcatcctcgccttcatgccgactgggatggggcc 311
Query: 107 tgctgctgattgcccaagcgatccggcctgtgatccacaagactgggctctggggctcga 166
|||| |||||||||||||||||| |||||| || | | | ||||| ||||| |||
Sbjct: 312 tgcttctgattgcccaagcgatcaagcctgtcgtcgagatggtcgggctgtgggggtcgg 371
Query: 167 tcaaggctcttgcccggggctacgagatcctgatgggacttctcctgttcacgcccatcg 226
| || | ||| |||||||||||||||||||||||||| | || |||||||| |||||||
Sbjct: 372 tgaaagntctcgcccggggctacgagatcctgatggg-gtcctgctgttcac-cccatcg 429
Query: 227 ccttcctcgcctggttcccgttcgtgtcggaattccagac 266
| ||||| || |||||||| || ||||| || ||||||||
Sbjct: 430 cgttccttgcgtggttccc-tttgtgtccgagttccagac 468
>gb|CK153351.1|CK153351 FGAS031946 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 869
Score = 73.8 bits (37), Expect = 1e-011
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 238 tggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggcgttcagcaga 297
|||||||| ||||| || || |||||||| ||||||||||||||||||| ||||| |||
Sbjct: 380 tggttccccttcgtctccgagttccagacgcggatgctgttcaaccaggcattcagtaga 439
Query: 298 ggtctgcagatctcccg 314
|| |||||||| |||||
Sbjct: 440 ggactgcagatttcccg 456
>gb|CV768769.1|CV768769 FGAS063160 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 73.8 bits (37), Expect = 1e-011
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 238 tggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggcgttcagcaga 297
|||||||| ||||| || || |||||||| ||||||||||||||||||| ||||| |||
Sbjct: 331 tggttccccttcgtctccgagttccagacgcggatgctgttcaaccaggcattcagtaga 390
Query: 298 ggtctgcagatctcccg 314
|| |||||||| |||||
Sbjct: 391 ggactgcagatttcccg 407
>gb|CD490322.1|CD490322 WHE2494_D06_H12ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2494_D06_H12, mRNA sequence
Length = 421
Score = 71.9 bits (36), Expect = 6e-011
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 259 ttccagaccaggatgctgttcaaccaggcgttcagcagaggtctgcagatctcccg 314
|||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 414 ttccagacgcggatgctgttcaaccaggcgttcagtagaggactgcagatttcccg 359
>gb|CK207448.1|CK207448 FGAS019071 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1129
Score = 65.9 bits (33), Expect = 3e-009
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 238 tggttcccgttcgtgtcggaattccagaccaggatgctgttcaaccaggcgttcagcaga 297
|||||||| ||||| || || || ||||| ||||||||||||||||||| ||||| |||
Sbjct: 730 tggttccccttcgtctccgagtttcagacgcggatgctgttcaaccaggcattcagtaga 789
Query: 298 ggtctgcagatctcccg 314
|| |||||||| |||||
Sbjct: 790 ggactgcagatttcccg 806
>gb|BJ273587.1|BJ273587 BJ273587 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh17p13 3', mRNA sequence
Length = 509
Score = 61.9 bits (31), Expect = 5e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 276 gttcaaccaggcgttcagcagaggtctgcagatctcccg 314
|||||||||||||||||| |||||||||||||| |||||
Sbjct: 508 gttcaaccaggcgttcagtagaggtctgcagatttcccg 470
>gb|CK154494.1|CK154494 FGAS033196 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 890
Score = 61.9 bits (31), Expect = 5e-008
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 266 ccaggatgctgttcaaccaggc-gttcagcagaggtctgcagatctcccgtatcctggga 324
|||||||||| || ||||| || ||||| |||||| |||||||||||||||||||| |
Sbjct: 682 ccaggatgctcttgaaccacgccgttcaccagaggcctgcagatctcccgtatcctcgcc 623
Query: 325 ggacacaagaaagaccgag 343
|| |||||||| |||||||
Sbjct: 622 ggccacaagaaggaccgag 604
>gb|BJ211685.1|BJ211685 BJ211685 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh32i15 5', mRNA sequence
Length = 342
Score = 60.0 bits (30), Expect = 2e-007
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 73 tgcatccttgctttcatgcccactggatggggt-ttgctgctgattgcccaagcgatc 129
|||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 280 tgcatcctcgccttcatgccgactggatggggccttgcttctgattgcccaagcgatc 337
>gb|BG607488.1|BG607488 WHE2494_D06_H12ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2494_D06_H12,
mRNA sequence
Length = 379
Score = 58.0 bits (29), Expect = 8e-007
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccg 314
|||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 1 ctgttcaaccaggcgttcagtagaggactgcagatttcccg 41
>gb|BE492039.1|BE492039 WHE0552_B02_B02ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0552_B02_B02, mRNA
sequence
Length = 524
Score = 56.0 bits (28), Expect = 3e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 271 atgctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
||||||||||||||||| |||||| | |||||| ||||||||| |||||||
Sbjct: 157 atgctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 208
>gb|BQ904431.1|BQ904431 Ta04_03h09_R
Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_03h09, mRNA
sequence
Length = 303
Score = 56.0 bits (28), Expect = 3e-006
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 294 cagaggtctgcagatctcccgtatcctgggaggacacaagaaagaccgag 343
|||||| ||||||||||||||||||| || || |||||||| |||||||
Sbjct: 297 cagaggcctgcagatctcccgtatccycggcggccacaagaaggaccgag 248
>gb|CL902396.1|CL902396 CSHC1771 1639HC library Triticum aestivum genomic clone
1639HC09C14, DNA sequence
Length = 437
Score = 50.1 bits (25), Expect = 2e-004
Identities = 76/93 (81%)
Strand = Plus / Plus
Query: 219 gcccatcgccttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctgtt 278
|||||||||| ||||| | |||||||| ||| |||| || |||||||| | |||| ||
Sbjct: 209 gcccatcgccgtcctctcgtggttccccttcatgtcagagttccagacgcgtctgctctt 268
Query: 279 caaccaggcgttcagcagaggtctgcagatctc 311
|||||| || |||||| | || |||||||||||
Sbjct: 269 caaccaagccttcagccggggcctgcagatctc 301
>gb|BE428096.1|BE428096 MTD003.C04F990615 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD003.C04, mRNA
sequence
Length = 399
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
|||||||||||||| |||||| | |||||| ||||||||| |||||||
Sbjct: 233 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 281
>gb|BJ274419.1|BJ274419 BJ274419 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh22b10 3', mRNA sequence
Length = 757
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
|||||||||||||| |||||| | |||||| ||||||||| |||||||
Sbjct: 305 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 257
>gb|AL820316.1|AL820316 AL820316 N:130 Triticum aestivum cDNA clone H03_N130_plate_28, mRNA
sequence
Length = 437
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
|||||||||||||| |||||| | |||||| ||||||||| |||||||
Sbjct: 82 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 130
>gb|CA499643.1|CA499643 WHE4009_G12_M23ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4009_G12_M23, mRNA sequence
Length = 554
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
|||||||||||||| |||||| | |||||| ||||||||| |||||||
Sbjct: 427 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 475
>gb|CA660459.1|CA660459 wlm1.pk0019.f4 wlm1 Triticum aestivum cDNA clone wlm1.pk0019.f4 5'
end, mRNA sequence
Length = 515
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
|||||||||||||| |||||| | |||||| ||||||||| |||||||
Sbjct: 100 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 52
>gb|CA667704.1|CA667704 wlsu1.pk017.p1 wlsu1 Triticum aestivum cDNA clone wlsu1.pk017.p1 5'
end, mRNA sequence
Length = 461
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
|||||||||||||| |||||| | |||||| ||||||||| |||||||
Sbjct: 315 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 363
>gb|CA668899.1|CA668899 wlsu1.pk023.i2 wlsu1 Triticum aestivum cDNA clone wlsu1.pk023.i2 5'
end, mRNA sequence
Length = 500
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
|||||||||||||| |||||||||||| || |||| |||| |||||||
Sbjct: 392 ctgttcaaccaggctttcagcagaggtttggagatttccctcatcctgg 344
>gb|CD452820.1|CD452820 WHE1132_C10_F20ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1132_C10_F20,
mRNA sequence
Length = 715
Score = 50.1 bits (25), Expect = 2e-004
Identities = 76/93 (81%)
Strand = Plus / Minus
Query: 219 gcccatcgccttcctcgcctggttcccgttcgtgtcggaattccagaccaggatgctgtt 278
|||||||||| ||||| | |||||||| ||| |||| || |||||||| | |||| ||
Sbjct: 332 gcccatcgccgtcctctcgtggttccccttcatgtcagagttccagacgcgtctgctctt 273
Query: 279 caaccaggcgttcagcagaggtctgcagatctc 311
|||||| || |||||| | || |||||||||||
Sbjct: 272 caaccaagccttcagccggggcctgcagatctc 240
>gb|CD454191.1|CD454191 WHE0991-0994_B23_B23ZT CS wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0991-0994_B23_B23, mRNA
sequence
Length = 762
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
|||||||||||||| |||||| | |||||| ||||||||| |||||||
Sbjct: 313 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 265
>gb|CD938994.1|CD938994 OV.111N14F010309 OV Triticum aestivum cDNA clone OV111N14, mRNA
sequence
Length = 508
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
|||||||||||||| |||||| | |||||| ||||||||| |||||||
Sbjct: 142 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 190
>gb|DQ086487.1| Triticum aestivum putative 1,3-beta-glucan synthase 12 (GSL12)
mRNA, partial cds
Length = 527
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 274 ctgttcaaccaggcgttcagcagaggtctgcagatctcccgtatcctgg 322
|||||||||||||| |||||| | |||||| ||||||||| |||||||
Sbjct: 251 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 299
>gb|BJ273393.1|BJ273393 BJ273393 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh17b01 3', mRNA sequence
Length = 468
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 274 ctgttcaaccaggcgttcagcagaggt 300
|||||||||||||| ||||||||||||
Sbjct: 177 ctgttcaaccaggctttcagcagaggt 151
>gb|CA650294.1|CA650294 wre1n.pk0150.g10 wre1n Triticum aestivum cDNA clone
wre1n.pk0150.g10 5' end, mRNA sequence
Length = 435
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 274 ctgttcaaccaggcgttcagcagaggt 300
|||||||||||||| ||||||||||||
Sbjct: 254 ctgttcaaccaggctttcagcagaggt 280
>gb|CA667480.1|CA667480 wlsu1.pk015.b6 wlsu1 Triticum aestivum cDNA clone wlsu1.pk015.b6 5'
end, mRNA sequence
Length = 455
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 274 ctgttcaaccaggcgttcagcagaggt 300
|||||||||||||| ||||||||||||
Sbjct: 143 ctgttcaaccaggctttcagcagaggt 169
>gb|CA669387.1|CA669387 wlsu1.pk022.h13 wlsu1 Triticum aestivum cDNA clone wlsu1.pk022.h13
5' end, mRNA sequence
Length = 437
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 274 ctgttcaaccaggcgttcagcagaggt 300
|||||||||||||| ||||||||||||
Sbjct: 390 ctgttcaaccaggctttcagcagaggt 364
>gb|CA670118.1|CA670118 wlsu1.pk025.m7 wlsu1 Triticum aestivum cDNA clone wlsu1.pk025.m7 5'
end, mRNA sequence
Length = 460
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 274 ctgttcaaccaggcgttcagcagaggt 300
|||||||||||||| ||||||||||||
Sbjct: 127 ctgttcaaccaggctttcagcagaggt 153
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 153,530
Number of Sequences: 636343
Number of extensions: 153530
Number of successful extensions: 63231
Number of sequences better than 0.5: 60
Number of HSP's better than 0.5 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63145
Number of HSP's gapped (non-prelim): 82
length of query: 690
length of database: 367,240,239
effective HSP length: 19
effective length of query: 671
effective length of database: 355,149,722
effective search space: 238305463462
effective search space used: 238305463462
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)