BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418861.2.1
(614 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN009326.1|CN009326 WHE3857_D12_H23ZS Wheat Fusarium gra... 424 e-117
gb|U60754.1|TAU60754 Triticum aestivum delta-24-sterol meth... 377 e-103
gb|BJ271067.1|BJ271067 BJ271067 Y. Ogihara unpublished cDNA... 345 2e-093
gb|CV765668.1|CV765668 FGAS060055 Triticum aestivum FGAS: L... 337 5e-091
gb|CV782652.1|CV782652 FGAS077065 Triticum aestivum FGAS: L... 270 1e-070
gb|BG263744.1|BG263744 WHE2348_E04_J08ZS Wheat pre-anthesis... 254 6e-066
gb|BG605013.1|BG605013 WHE2326_B07_C14ZS Wheat pre-anthesis... 248 4e-064
gb|CD878323.1|CD878323 AZO4.102H09F011002 AZO4 Triticum aes... 228 4e-058
gb|BJ225577.1|BJ225577 BJ225577 Y. Ogihara unpublished cDNA... 202 2e-050
gb|CA723985.1|CA723985 wds1f.pk003.m8 wds1f Triticum aestiv... 188 3e-046
gb|BE585605.1|BE585605 EST#5T7_B05_b5_041 KSU wheat Fusariu... 159 3e-037
gb|U60755.1|TAU60755 Triticum aestivum delta-24-sterol meth... 133 2e-029
gb|CA661588.1|CA661588 wlmk1.pk0001.c4 wlmk1 Triticum aesti... 129 2e-028
gb|BQ578591.1|BQ578591 WHE0307_B09_D17ZS Wheat unstressed s... 90 2e-016
gb|BG313627.1|BG313627 WHE2056_E07_I14ZS Wheat salt-stresse... 80 2e-013
gb|BE493112.1|BE493112 WHE0567_C02_E03ZE Triticum monococcu... 78 8e-013
gb|CA724136.1|CA724136 wds1f.pk003.f5 wds1f Triticum aestiv... 66 3e-009
gb|BG604991.1|BG604991 WHE2325_G10_M19ZS Wheat pre-anthesis... 58 7e-007
gb|CA683417.1|CA683417 wlm96.pk0020.d10 wlm96 Triticum aest... 40 0.17
gb|CA704186.1|CA704186 wdk1c.pk012.i11 wdk1c Triticum aesti... 40 0.17
gb|BT008959.1| Triticum aestivum clone wdk1c.pk012.i11:fis,... 40 0.17
>gb|CN009326.1|CN009326 WHE3857_D12_H23ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3857_D12_H23,
mRNA sequence
Length = 723
Score = 424 bits (214), Expect = e-117
Identities = 382/438 (87%)
Strand = Plus / Plus
Query: 177 gtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagtcc 236
||||| ||||||||||||||||||||||| || ||||||||||||||| | ||||| |||
Sbjct: 235 gtcgacgagtatgagaaatatcatggatattacggagggaaggaggaatcgaggaaatcc 294
Query: 237 aactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatggt 296
||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 295 aactacaccgatatggttaataaatactatgatcttgctactagcttctatgagtatggc 354
Query: 297 tggggtgaatccttccactttgctcacagatggaatggagaatccttacgtgaaagcatc 356
||||||||||||||||||||||||||||| |||||||| ||||| ||| | |||||||||
Sbjct: 355 tggggtgaatccttccactttgctcacaggtggaatggggaatctttaagggaaagcatc 414
Query: 357 aagcgacatgagcattttcttgccctgcaacttggtttgaaaccaggaatgaaggtttta 416
|| ||||| ||||| ||||| ||| | || |||| ||||||||||| |||||||||||
Sbjct: 415 aaacgacacgagcactttctggccttacagcttgagttgaaaccaggcatgaaggttttg 474
Query: 417 gatgtgggctgtggaataggtggaccactgagagaaattgcaagatttagctcaacttca 476
||||| |||||||||||||| || ||| | ||||||||||| ||||||||||| || |||
Sbjct: 475 gatgtcggctgtggaataggcgggccattaagagaaattgcgagatttagctccacctca 534
Query: 477 gttaccggattgaataacaacgaataccagataaccaggggaaaggagctcaaccgttta 536
||||| |||||||| |||||||| ||||||||||| |||||||||| ||| || || |
Sbjct: 535 gttactggattgaacaacaacgactaccagataactaggggaaaggcgcttaatcggtcg 594
Query: 537 gcaggaattagtggaacatgtgattttgtcaaggcggacttcatgaagatgccgttcgat 596
| |||| || | | ||| ||||||||||||||||| ||||||||||||||||| ||| |
Sbjct: 595 gtaggacttggcgcaacttgtgattttgtcaaggcagacttcatgaagatgccattctct 654
Query: 597 gacaacacttttgatgct 614
|| |||||||| ||||||
Sbjct: 655 gataacactttcgatgct 672
>gb|U60754.1|TAU60754 Triticum aestivum delta-24-sterol methyltransferase (TA-MT) mRNA,
complete cds
Length = 1392
Score = 377 bits (190), Expect = e-103
Identities = 370/430 (86%)
Strand = Plus / Plus
Query: 185 gtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagtccaactatac 244
||||||||||||||||||||| || ||||||||||||||| | ||||| |||||||| ||
Sbjct: 166 gtatgagaaatatcatggatattacggagggaaggaggaatcgaggaaatccaactacac 225
Query: 245 tgatatggttaataaatactatgatcttgccactagcttctatgagtatggttggggtga 304
||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 226 cgatatggttaataaatattatgatcttgctactagcttctatgagtatggctggggtga 285
Query: 305 atccttccactttgctcacagatggaatggagaatccttacgtgaaagcatcaagcgaca 364
||||||||||||||||||||| |||||||| ||||| ||| | ||||||||||| | ||
Sbjct: 286 atccttccactttgctcacaggtggaatggggaatctttaagggaaagcatcaaaaggca 345
Query: 365 tgagcattttcttgccctgcaacttggtttgaaaccaggaatgaaggttttagatgtggg 424
||||| ||||| || | || |||| ||||||||||| ||||||||||| ||||| ||
Sbjct: 346 cgagcactttctggctttacagcttgagttgaaaccagggatgaaggttttggatgtcgg 405
Query: 425 ctgtggaataggtggaccactgagagaaattgcaagatttagctcaacttcagttaccgg 484
|||||||||||| || ||| | ||||||||||| ||||||||||| || |||||||| ||
Sbjct: 406 ctgtggaataggcgggccattaagagaaattgcgagatttagctccacctcagttactgg 465
Query: 485 attgaataacaacgaataccagataaccaggggaaaggagctcaaccgtttagcaggaat 544
|||||| |||||||| ||||||||||| |||||||||| ||| || || | | |||| |
Sbjct: 466 attgaacaacaacgactaccagataactaggggaaaggcgcttaatcggtcggtaggact 525
Query: 545 tagtggaacatgtgattttgtcaaggcggacttcatgaagatgccgttcgatgacaacac 604
| | | || ||||||||||||||||| ||||||||||||||||| ||| ||| |||||
Sbjct: 526 tggcgctacttgtgattttgtcaaggcagacttcatgaagatgccattctctgataacac 585
Query: 605 ttttgatgct 614
||| ||||||
Sbjct: 586 tttcgatgct 595
>gb|BJ271067.1|BJ271067 BJ271067 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh23p14 5', mRNA sequence
Length = 650
Score = 345 bits (174), Expect = 2e-093
Identities = 327/378 (86%)
Strand = Plus / Plus
Query: 237 aactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatggt 296
||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 7 aactacaccgatatggttaataaatactatgatcttgctactagcttctatgagtatggc 66
Query: 297 tggggtgaatccttccactttgctcacagatggaatggagaatccttacgtgaaagcatc 356
|||||||| |||||||||||||||||||| |||||||||||||| ||| | |||||||||
Sbjct: 67 tggggtgagtccttccactttgctcacaggtggaatggagaatctttaagggaaagcatc 126
Query: 357 aagcgacatgagcattttcttgccctgcaacttggtttgaaaccaggaatgaaggtttta 416
|| || || ||||| ||||| || | || |||| ||||||||||| |||||||||||
Sbjct: 127 aaacggcacgagcactttctggctttacagcttgagttgaaaccagggatgaaggttttg 186
Query: 417 gatgtgggctgtggaataggtggaccactgagagaaattgcaagatttagctcaacttca 476
||||| |||||||||||||| || ||| | ||||||||||| ||||||||||| || |||
Sbjct: 187 gatgtcggctgtggaataggcgggccattaagagaaattgcgagatttagctccacctca 246
Query: 477 gttaccggattgaataacaacgaataccagataaccaggggaaaggagctcaaccgttta 536
||||| |||||||| |||||||| ||||||||||| |||||||||| ||| || || |
Sbjct: 247 gttactggattgaacaacaacgactaccagataactaggggaaaggcgcttaatcggtcg 306
Query: 537 gcaggaattagtggaacatgtgattttgtcaaggcggacttcatgaagatgccgttcgat 596
| |||| || | | ||| ||||||||||||||||| ||||||||||||||||| ||| |
Sbjct: 307 gtaggacttggcgcaacttgtgattttgtcaaggcagacttcatgaagatgccattctct 366
Query: 597 gacaacacttttgatgct 614
|| |||||||||||||||
Sbjct: 367 gataacacttttgatgct 384
>gb|CV765668.1|CV765668 FGAS060055 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 816
Score = 337 bits (170), Expect = 5e-091
Identities = 344/402 (85%)
Strand = Plus / Plus
Query: 213 gggaaggaggaagcaaggaagtccaactatactgatatggttaataaatactatgatctt 272
|||||||||||| | ||||| |||||||| || ||||||||||||||||| |||||||||
Sbjct: 107 gggaaggaggaatcgaggaaatccaactacaccgatatggttaataaatattatgatctt 166
Query: 273 gccactagcttctatgagtatggttggggtgaatccttccactttgctcacagatggaat 332
|| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 167 gctactagcttctatgagtatggctggggtgaatccttccactttgctcacaggtggaat 226
Query: 333 ggagaatccttacgtgaaagcatcaagcgacatgagcattttcttgccctgcaacttggt 392
|| ||||| ||| | ||||||||||| | || ||||| ||||| || | || ||||
Sbjct: 227 ggggaatctttaagggaaagcatcaaaaggcacgagcactttctggctttacagcttgag 286
Query: 393 ttgaaaccaggaatgaaggttttagatgtgggctgtggaataggtggaccactgagagaa 452
||||||||||| ||||||||||| ||||| |||||||||||||| || ||| | ||||||
Sbjct: 287 ttgaaaccagggatgaaggttttggatgtcggctgtggaataggcgggccattaagagaa 346
Query: 453 attgcaagatttagctcaacttcagttaccggattgaataacaacgaataccagataacc 512
||||| ||||||||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct: 347 attgcgagatttagctccacctcagttactggattgaacaacaacgactaccagataact 406
Query: 513 aggggaaaggagctcaaccgtttagcaggaattagtggaacatgtgattttgtcaaggcg 572
|||||||||| ||| || || | | |||| || | | || |||||||||||||||||
Sbjct: 407 aggggaaaggcgcttaatcggtcggtaggacttggcgctacttgtgattttgtcaaggca 466
Query: 573 gacttcatgaagatgccgttcgatgacaacacttttgatgct 614
||||||||||||||||| ||| ||| |||||||| ||||||
Sbjct: 467 gacttcatgaagatgccattctctgataacactttcgatgct 508
>gb|CV782652.1|CV782652 FGAS077065 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 860
Score = 270 bits (136), Expect = 1e-070
Identities = 270/312 (86%), Gaps = 2/312 (0%)
Strand = Plus / Plus
Query: 177 gtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagtcc 236
||||| ||||||||||||||||||||||| || ||||||||||||||| | ||||| |||
Sbjct: 305 gtcgacgagtatgagaaatatcatggatattacggagggaaggaggaatcgaggaaatcc 364
Query: 237 aactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatggt 296
||||| || ||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 365 aactacaccgatatgggtaataaatactatgatcttgctactagcttctatgagtatggc 424
Query: 297 tggggtgaatccttccactttgctcacagatggaatggagaatccttacgtgaaagcatc 356
||||||||||||||||||||||||||||| |||||||| ||||| ||| | |||||||||
Sbjct: 425 tggggtgaatccttccactttgctcacaggtggaatggggaatctttaagggaaagcatc 484
Query: 357 aagcgacatgagcattttcttgccctgcaacttggtttgaaaccaggaatgaaggtttta 416
|| ||||| ||||| ||||| ||| | || |||| |||||||| || |||||||||||
Sbjct: 485 aaacgacacgagcactttctggccttacagcttgagttgaaacc-ggcatgaaggttttg 543
Query: 417 gatgtgggctgtggaatagg-tggaccactgagagaaattgcaagatttagctcaacttc 475
||||| |||||| |||||| || ||| | ||| ||||||| ||||||| ||| || ||
Sbjct: 544 gatgtccgctgtgaaataggcggggccattaagacaaattgcgagatttacctccacctc 603
Query: 476 agttaccggatt 487
|||||| |||||
Sbjct: 604 agttactggatt 615
>gb|BG263744.1|BG263744 WHE2348_E04_J08ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2348_E04_J08, mRNA sequence
Length = 267
Score = 254 bits (128), Expect = 6e-066
Identities = 182/200 (91%)
Strand = Plus / Plus
Query: 177 gtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagtcc 236
||||||||||||||||||||||||||||| || ||||||||||||||| | ||||| |||
Sbjct: 45 gtcgatgagtatgagaaatatcatggatattacggagggaaggaggaatcgaggaaatcc 104
Query: 237 aactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatggt 296
||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 105 aactacaccgatatggttaataaatactatgatcttgctactagcttctatgagtatggc 164
Query: 297 tggggtgaatccttccactttgctcacagatggaatggagaatccttacgtgaaagcatc 356
|||||||| |||||||||||||||||||| |||||||||||||| ||| | |||||||||
Sbjct: 165 tggggtgagtccttccactttgctcacaggtggaatggagaatctttaagggaaagcatc 224
Query: 357 aagcgacatgagcattttct 376
|| || || ||||| |||||
Sbjct: 225 aaacggcacgagcactttct 244
>gb|BG605013.1|BG605013 WHE2326_B07_C14ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2326_B07_C14, mRNA sequence
Length = 417
Score = 248 bits (125), Expect = 4e-064
Identities = 181/200 (90%)
Strand = Plus / Plus
Query: 177 gtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagtcc 236
||||| ||||||||||||||||||||||| || ||||||||||||||| | ||||| |||
Sbjct: 194 gtcgacgagtatgagaaatatcatggatattacggagggaaggaggaatcgaggaaatcc 253
Query: 237 aactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatggt 296
||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 254 aactacaccgatatggttaataaatactatgatcttgctactagcttctatgagtatggc 313
Query: 297 tggggtgaatccttccactttgctcacagatggaatggagaatccttacgtgaaagcatc 356
||||||||||||||||||||||||||||| |||||||| ||||| || | |||||||||
Sbjct: 314 tggggtgaatccttccactttgctcacaggtggaatggggaatctntaagggaaagcatc 373
Query: 357 aagcgacatgagcattttct 376
|| ||||| ||||| |||||
Sbjct: 374 aaacgacacgagcactttct 393
>gb|CD878323.1|CD878323 AZO4.102H09F011002 AZO4 Triticum aestivum cDNA clone AZO4102H09,
mRNA sequence
Length = 540
Score = 228 bits (115), Expect = 4e-058
Identities = 165/182 (90%)
Strand = Plus / Plus
Query: 177 gtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagtcc 236
||||| |||||||| ||||||||||||||||| ||||||||||||||| | ||||| |||
Sbjct: 317 gtcgacgagtatgaaaaatatcatggatactacggagggaaggaggaatcgaggaaatcc 376
Query: 237 aactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatggt 296
||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 377 aactacaccgatatggttaataaatattatgatcttgctactagcttctatgagtatggn 436
Query: 297 tggggtgaatccttccactttgctcacagatggaatggagaatccttacgtgaaagcatc 356
||||||||||||||||||||||||||||| |||||||| ||||| ||| | ||||| |||
Sbjct: 437 tggggtgaatccttccactttgctcacaggtggaatggggaatctttaagggaaagaatc 496
Query: 357 aa 358
||
Sbjct: 497 aa 498
>gb|BJ225577.1|BJ225577 BJ225577 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl22m20 5', mRNA sequence
Length = 488
Score = 202 bits (102), Expect = 2e-050
Identities = 239/285 (83%)
Strand = Plus / Plus
Query: 330 aatggagaatccttacgtgaaagcatcaagcgacatgagcattttcttgccctgcaactt 389
||||| ||||| ||| | ||||||||||| ||||| ||||| ||||| ||| | || |||
Sbjct: 3 aatggggaatctttaagggaaagcatcaaacgacacgagcactttctggccttacagctt 62
Query: 390 ggtttgaaaccaggaatgaaggttttagatgtgggctgtggaataggtggaccactgaga 449
| ||||||||||| ||||||||||| ||||| |||||||||||||| || ||| | |||
Sbjct: 63 gagttgaaaccaggcatgaaggttttggatgtcggctgtggaataggcgggccattaaga 122
Query: 450 gaaattgcaagatttagctcaacttcagttaccggattgaataacaacgaataccagata 509
|||||||| ||||||||||| || |||||||| |||||||| |||||| | |||||||||
Sbjct: 123 gaaattgcgagatttagctccacctcagttactggattgaacaacaacnactaccagata 182
Query: 510 accaggggaaaggagctcaaccgtttagcaggaattagtggaacatgtgattttgtcaag 569
|| |||||||||| ||| || || | | |||| || | | ||| |||||||||||||||
Sbjct: 183 actaggggaaaggcgcttaatcggtcggtaggacttggcgcaacttgtgattttgtcaag 242
Query: 570 gcggacttcatgaagatgccgttcgatgacaacacttttgatgct 614
|| ||||||||||||||||| ||| ||| |||||||| ||||||
Sbjct: 243 gcagacttcatgaagatgccattctctgataacactttcgatgct 287
>gb|CA723985.1|CA723985 wds1f.pk003.m8 wds1f Triticum aestivum cDNA clone wds1f.pk003.m8 5'
end, mRNA sequence
Length = 459
Score = 188 bits (95), Expect = 3e-046
Identities = 152/167 (91%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 177 gtcgatgagtatgagaaatatcatggatactat-ggagggaaggaggaagcaaggaagtc 235
||||||||||||||||||||||||||||| || ||||||||||||||| | ||||| ||
Sbjct: 237 gtcgatgagtatgagaaatatcatggatattaacggagggaaggaggaatcgaggaaatc 296
Query: 236 caactatactgatatggttaataaatactatgatcttgccact-agcttctatgagtatg 294
|||||| || ||||||||||||||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 297 caactacaccgatatggttaataaatactatgatcttgctactaagcttctatgaatatg 356
Query: 295 gttggggtgaa-tccttccactttgctcacagatggaatggagaatc 340
| ||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 357 gctggggtgaagtccttccactttgctcacaagtggaatggagaatc 403
>gb|BE585605.1|BE585605 EST#5T7_B05_b5_041 KSU wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
EST#5T7_B05_b5_041, mRNA sequence
Length = 712
Score = 159 bits (80), Expect = 3e-037
Identities = 176/208 (84%)
Strand = Plus / Plus
Query: 407 gaaggttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttag 466
||||||||| ||||| |||||||||||||| || ||| | ||||||||||| ||||||||
Sbjct: 6 gaaggttttggatgtcggctgtggaataggcgggccattaagagaaattgcgagatttag 65
Query: 467 ctcaacttcagttaccggattgaataacaacgaataccagataaccaggggaaaggagct 526
||| || |||||||| |||||||| |||||||| ||||||||||| |||||||||| |||
Sbjct: 66 ctccacctcagttactggattgaacaacaacgactaccagataactaggggaaaggcgct 125
Query: 527 caaccgtttagcaggaattagtggaacatgtgattttgtcaaggcggacttcatgaagat 586
|| || | | |||| || | | || ||||||||||||||||| ||||||||||||||
Sbjct: 126 taatcggtcggtaggacttggcgctacttgtgattttgtcaaggcagacttcatgaagat 185
Query: 587 gccgttcgatgacaacacttttgatgct 614
||| ||| ||| |||||||| ||||||
Sbjct: 186 gccattctctgataacactttcgatgct 213
>gb|U60755.1|TAU60755 Triticum aestivum delta-24-sterol methyltransferase (TA-MT) gene,
complete cds
Length = 4749
Score = 133 bits (67), Expect = 2e-029
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 251 ggttaataaatactatgatcttgccactagcttctatgagtatggttggggtgaatcctt 310
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 1017 ggttaataaatactatgatcttgctactagcttctatgagtatggctggggtgaatcctt 1076
Query: 311 ccactttgctcacag 325
|||||||||||||||
Sbjct: 1077 ccactttgctcacag 1091
Score = 81.8 bits (41), Expect = 5e-014
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 185 gtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagtccaactatac 244
||||||||||||||||||||| || ||||||||||||||| | ||||| |||||||| ||
Sbjct: 407 gtatgagaaatatcatggatattacggagggaaggaggaatcgaggaaatccaactacac 466
Query: 245 tgatatggt 253
||||||||
Sbjct: 467 cgatatggt 475
Score = 67.9 bits (34), Expect = 8e-010
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 465 agctcaacttcagttaccggattgaataacaacgaataccagataaccaggggaaagg 522
||||| || |||||||| |||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 2245 agctccacctcagttactggattgaacaacaacgactaccagataactaggggaaagg 2302
Score = 60.0 bits (30), Expect = 2e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 409 aggttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttag 466
||||||| ||||| |||||||||||||| || ||| | ||||||||||| ||||||||
Sbjct: 1452 aggttttggatgtcggctgtggaataggcgggccattaagagaaattgcgagatttag 1509
Score = 60.0 bits (30), Expect = 2e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 327 tggaatggagaatccttacgtgaaagcatcaagcgacatgagcattttcttgccctgcaa 386
|||||||| ||||| ||| | ||||||||||| ||||| ||||| ||||| ||| | ||
Sbjct: 1237 tggaatggggaatctttaagggaaagcatcaaacgacacgagcactttctggccttacag 1296
Query: 387 cttggtttgaaaccaggaatgaaggt 412
|||| ||||||||||| ||||||||
Sbjct: 1297 cttgagttgaaaccaggcatgaaggt 1322
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 568 aggcggacttcatgaagatgccgttcgatgacaacacttttgatgct 614
|||| ||||||||||||||||| ||| ||| |||||||| ||||||
Sbjct: 2856 aggcagacttcatgaagatgccattctctgataacactttcgatgct 2902
>gb|CA661588.1|CA661588 wlmk1.pk0001.c4 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0001.c4
5' end, mRNA sequence
Length = 448
Score = 129 bits (65), Expect = 2e-028
Identities = 86/93 (92%)
Strand = Plus / Plus
Query: 177 gtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagtcc 236
||||||||||||||||||||||||||||| || ||||||||||||||| | ||||| |||
Sbjct: 242 gtcgatgagtatgagaaatatcatggatattacggagggaaggaggaatcgaggaaatcc 301
Query: 237 aactatactgatatggttaataaatactatgat 269
||||| || ||||||||||||||||||||||||
Sbjct: 302 aactacaccgatatggttaataaatactatgat 334
>gb|BQ578591.1|BQ578591 WHE0307_B09_D17ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0307_B09_D17, mRNA
sequence
Length = 714
Score = 89.7 bits (45), Expect = 2e-016
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 258 aaatactatgatcttgccactagcttctatgagtatggttggggtgaatccttccacttt 317
||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 641 aaatactatgatcttgctactagcttctatgagtgtggctggactgaatccttccacttt 700
Query: 318 gctca 322
|||||
Sbjct: 701 gctca 705
>gb|BG313627.1|BG313627 WHE2056_E07_I14ZS Wheat salt-stressed sheath cDNA library Triticum
aestivum cDNA clone WHE2056_E07_I14, mRNA sequence
Length = 403
Score = 79.8 bits (40), Expect = 2e-013
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 555 tgtgattttgtcaaggcggacttcatgaagatgccgttcgatgacaacacttttgatgct 614
||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 24 tgtgattttgtcaaggcagacttcatgaagatgccattctctgataacacttttgatgct 83
>gb|BE493112.1|BE493112 WHE0567_C02_E03ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0567_C02_E03, mRNA
sequence
Length = 446
Score = 77.8 bits (39), Expect = 8e-013
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 492 aacaacgaataccagataaccaggggaaaggagctcaaccgtttagcaggaattagtgga 551
|||||||| ||||||||||| |||||||||| ||| || || | | |||| || | |
Sbjct: 5 aacaacgactaccagataactaggggaaaggcgcttaatcggtctgtaggacttggcgct 64
Query: 552 acatgtgattttgtcaaggcggacttcatgaagatgccgttcgatgacaacacttttgat 611
|| ||||||||||||||||| ||||||||||||||||| ||| ||| |||||||| |||
Sbjct: 65 acttgtgattttgtcaaggcagacttcatgaagatgccattctctgataacactttcgat 124
Query: 612 gct 614
|||
Sbjct: 125 gct 127
>gb|CA724136.1|CA724136 wds1f.pk003.f5 wds1f Triticum aestivum cDNA clone wds1f.pk003.f5 5'
end, mRNA sequence
Length = 456
Score = 65.9 bits (33), Expect = 3e-009
Identities = 46/49 (93%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 177 gtcgatgagtatgagaaatatcatggatactatgga-gggaaggaggaa 224
||||||||||||||||||||||||||||| || ||| ||||||||||||
Sbjct: 276 gtcgatgagtatgagaaatatcatggatattacggaggggaaggaggaa 324
>gb|BG604991.1|BG604991 WHE2325_G10_M19ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2325_G10_M19, mRNA sequence
Length = 252
Score = 58.0 bits (29), Expect = 7e-007
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 177 gtcgatgagtatgagaaatatcatggata 205
|||||||||||||||||||||||||||||
Sbjct: 220 gtcgatgagtatgagaaatatcatggata 248
>gb|CA683417.1|CA683417 wlm96.pk0020.d10 wlm96 Triticum aestivum cDNA clone
wlm96.pk0020.d10 5' end, mRNA sequence
Length = 621
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 cctgcgctcccaccaccgcc 44
||||||||||||||||||||
Sbjct: 8 cctgcgctcccaccaccgcc 27
>gb|CA704186.1|CA704186 wdk1c.pk012.i11 wdk1c Triticum aestivum cDNA clone
wdk1c.pk012.i11 5' end, mRNA sequence
Length = 397
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 cctgcgctcccaccaccgcc 44
||||||||||||||||||||
Sbjct: 15 cctgcgctcccaccaccgcc 34
>gb|BT008959.1| Triticum aestivum clone wdk1c.pk012.i11:fis, full insert mRNA
sequence
Length = 1300
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 cctgcgctcccaccaccgcc 44
||||||||||||||||||||
Sbjct: 20 cctgcgctcccaccaccgcc 39
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 134,615
Number of Sequences: 636343
Number of extensions: 134615
Number of successful extensions: 35838
Number of sequences better than 0.5: 21
Number of HSP's better than 0.5 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35787
Number of HSP's gapped (non-prelim): 42
length of query: 614
length of database: 367,240,239
effective HSP length: 19
effective length of query: 595
effective length of database: 355,149,722
effective search space: 211314084590
effective search space used: 211314084590
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)