BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1724812.2.1
(804 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD881956.1|CD881956 F1.104N12F010330 F1 Triticum aestivu... 266 2e-069
gb|CV760335.1|CV760335 FGAS054719 Triticum aestivum FGAS: L... 256 2e-066
gb|CA688333.1|CA688333 wlm96.pk040.d13 wlm96 Triticum aesti... 206 2e-051
gb|BG908559.1|BG908559 TaLr1169D04F TaLr1 Triticum aestivum... 62 6e-008
gb|CD922960.1|CD922960 G750.105M17F010531 G750 Triticum aes... 62 6e-008
gb|CK168486.1|CK168486 FGAS043018 Triticum aestivum FGAS: T... 62 6e-008
gb|BG313174.1|BG313174 WHE2054_F07_L14ZS Wheat salt-stresse... 60 2e-007
gb|CD871509.1|CD871509 AZO2.118G11R010403 AZO2 Triticum aes... 58 1e-006
gb|CA625114.1|CA625114 wl1n.pk0123.c12 wl1n Triticum aestiv... 56 4e-006
gb|CA741400.1|CA741400 wia1c.pk002.l7 wia1c Triticum aestiv... 56 4e-006
gb|CD874269.1|CD874269 AZO3.101M04R011123 AZO3 Triticum aes... 56 4e-006
gb|CD926713.1|CD926713 GR45.001N13R001013 GR45 Triticum aes... 56 4e-006
gb|BQ802490.1|BQ802490 WHE2826_E05_I10ZS Triticum monococcu... 54 2e-005
gb|CA733021.1|CA733021 wlp1c.pk006.f2 wlp1c Triticum aestiv... 54 2e-005
gb|BG905373.1|BG905373 TaLr1139C08F TaLr1 Triticum aestivum... 52 6e-005
gb|BJ295748.1|BJ295748 BJ295748 Y. Ogihara unpublished cDNA... 52 6e-005
gb|CN012928.1|CN012928 WHE3954_F06_L12ZS Wheat Fusarium gra... 52 6e-005
gb|DR733077.1|DR733077 FGAS077332 Triticum aestivum FGAS: T... 52 6e-005
gb|CA714936.1|CA714936 wdk3c.pk022.k16 wdk3c Triticum aesti... 50 2e-004
gb|CD876252.1|CD876252 AZO3.109B21R011126 AZO3 Triticum aes... 50 2e-004
gb|CV764475.1|CV764475 FGAS058860 Triticum aestivum FGAS: L... 50 2e-004
gb|BE496865.1|BE496865 WHE0761_D01_H01ZS Wheat heat-stresse... 48 0.001
gb|CA711259.1|CA711259 wdk2c.pk018.m3 wdk2c Triticum aestiv... 48 0.001
gb|CD454260.1|CD454260 WHE1770_D02_H04ZT CS wheat pre-anthe... 48 0.001
gb|CD885680.1|CD885680 G118.100B15R010921 G118 Triticum aes... 48 0.001
gb|AJ717208.1|AJ717208 AJ717208 Triticum turgidum subsp. du... 48 0.001
gb|BE488971.1|BE488971 WHE1077_B03_D05ZS Wheat unstressed s... 46 0.004
gb|BJ230352.1|BJ230352 BJ230352 Y. Ogihara unpublished cDNA... 46 0.004
gb|BQ483250.1|BQ483250 WHE3506_D01_G02ZS Wheat unstressed r... 46 0.004
gb|CK168749.1|CK168749 FGAS043339 Triticum aestivum FGAS: T... 46 0.004
gb|BE445694.1|BE445694 WHE1452_G06_M12ZS Wheat etiolated se... 44 0.015
gb|BJ318808.1|BJ318808 BJ318808 Y. Ogihara unpublished cDNA... 44 0.015
gb|BQ803441.1|BQ803441 WHE2837_F11_K21ZS Triticum monococcu... 44 0.015
gb|CA612266.1|CA612266 wr1.pk0139.e8 wr1 Triticum aestivum ... 44 0.015
gb|CD453031.1|CD453031 WHE1452_G06_M12ZT CS wheat etiolated... 44 0.015
gb|CD867509.1|CD867509 AZO2.106H18R010329 AZO2 Triticum aes... 44 0.015
gb|CD882790.1|CD882790 F1.111D15F010430 F1 Triticum aestivu... 44 0.015
gb|CD926341.1|CD926341 G750.121L03F010711 G750 Triticum aes... 44 0.015
gb|CD929102.1|CD929102 GR45.107A07R010611 GR45 Triticum aes... 44 0.015
gb|CV761615.1|CV761615 FGAS056003 Triticum aestivum FGAS: L... 44 0.015
gb|CV765720.1|CV765720 FGAS060107 Triticum aestivum FGAS: L... 44 0.015
gb|BE213331.1|BE213331 EST0099 Triticum aestivum Lambda Zap... 42 0.058
gb|BE400071.1|BE400071 AWB010.C05F000328 ITEC AWB Wheat Mei... 42 0.058
gb|BM137436.1|BM137436 WHE0475_B01_C01ZS Wheat Fusarium gra... 42 0.058
gb|BJ279179.1|BJ279179 BJ279179 Y. Ogihara unpublished cDNA... 42 0.058
gb|BJ284242.1|BJ284242 BJ284242 Y. Ogihara unpublished cDNA... 42 0.058
gb|BQ483975.1|BQ483975 WHE3515_A05_B09ZS Wheat unstressed r... 42 0.058
gb|AL824749.1|AL824749 AL824749 p:234 Triticum aestivum cDN... 42 0.058
gb|AL825623.1|AL825623 AL825623 p:234 Triticum aestivum cDN... 42 0.058
gb|CA620385.1|CA620385 wl1n.pk0055.d12 wl1n Triticum aestiv... 42 0.058
gb|CA625189.1|CA625189 wl1n.pk0128.d8 wl1n Triticum aestivu... 42 0.058
gb|CA627421.1|CA627421 wl1n.pk0037.h8 wl1n Triticum aestivu... 42 0.058
gb|CA627517.1|CA627517 wl1n.pk153.d11 wl1n Triticum aestivu... 42 0.058
gb|CA700350.1|CA700350 wkm1c.pk005.e20 wkm1c Triticum aesti... 42 0.058
gb|CA703125.1|CA703125 wdk1c.pk008.o13 wdk1c Triticum aesti... 42 0.058
gb|CD915387.1|CD915387 G550.125P10F010713 G550 Triticum aes... 42 0.058
gb|CD939269.1|CD939269 OV.113A06R010410 OV Triticum aestivu... 42 0.058
gb|CK207680.1|CK207680 FGAS019331 Triticum aestivum FGAS: L... 42 0.058
gb|DR736708.1|DR736708 FGAS082078 Triticum aestivum FGAS: L... 42 0.058
gb|DR739942.1|DR739942 FGAS000208 Triticum aestivum FGAS: L... 42 0.058
gb|BE428856.1|BE428856 MTD011.F01F990617 ITEC MTD Durum Whe... 40 0.23
gb|BE443274.1|BE443274 WHE1110_B09_C18ZS Wheat etiolated se... 40 0.23
gb|BF202058.1|BF202058 WHE1773_C02_E03ZS Wheat pre-anthesis... 40 0.23
gb|BG607446.1|BG607446 WHE2479_G10_M19ZS Triticum monococcu... 40 0.23
gb|BG905834.1|BG905834 TaLr1142G10F TaLr1 Triticum aestivum... 40 0.23
gb|BJ231275.1|BJ231275 BJ231275 Y. Ogihara unpublished cDNA... 40 0.23
gb|BJ276816.1|BJ276816 BJ276816 Y. Ogihara unpublished cDNA... 40 0.23
gb|CA594072.1|CA594072 wpa1c.pk004.l1 wpa1c Triticum aestiv... 40 0.23
gb|CA655993.1|CA655993 wlm0.pk0021.d10 wlm0 Triticum aestiv... 40 0.23
gb|CA704082.1|CA704082 wdk1c.pk011.p15 wdk1c Triticum aesti... 40 0.23
gb|CD453448.1|CD453448 WHE0752_C06_E12ZT CS wheat heat-stre... 40 0.23
gb|CD491370.1|CD491370 WHE3085_F05_L09ZT CS wheat cold-stre... 40 0.23
gb|CD871773.1|CD871773 AZO2.119A15R010403 AZO2 Triticum aes... 40 0.23
gb|CD873852.1|CD873852 AZO3.100N13R011122 AZO3 Triticum aes... 40 0.23
gb|CD878484.1|CD878484 AZO4.102N19F011002 AZO4 Triticum aes... 40 0.23
gb|CD895871.1|CD895871 G174.101C21F010821 G174 Triticum aes... 40 0.23
gb|CF133966.1|CF133966 WHE4365_H02_P03ZT Wheat meiotic flor... 40 0.23
gb|CK161986.1|CK161986 FGAS014569 Triticum aestivum FGAS: L... 40 0.23
gb|CK209175.1|CK209175 FGAS020923 Triticum aestivum FGAS: L... 40 0.23
gb|AL808279.1|AL808279 AL808279 a:22 Triticum aestivum cDNA... 40 0.23
gb|CV765798.1|CV765798 FGAS060185 Triticum aestivum FGAS: L... 40 0.23
gb|DR432305.1|DR432305 441E-825 Line 441 epidermal library ... 40 0.23
gb|DR736996.1|DR736996 FGAS082366 Triticum aestivum FGAS: L... 40 0.23
gb|BT009372.1| Triticum aestivum clone wlm96.pk028.k4:fis, ... 40 0.23
>gb|CD881956.1|CD881956 F1.104N12F010330 F1 Triticum aestivum cDNA clone F1104N12, mRNA
sequence
Length = 662
Score = 266 bits (134), Expect = 2e-069
Identities = 317/378 (83%)
Strand = Plus / Plus
Query: 59 cctggactccgtggccgggcgcggcgcggtggtgccttggagcccccaggaccgcgtgct 118
|||||||||||| |||||||||||| ||||||||| |||||||| ||||||| |||||
Sbjct: 5 cctggactccgtcgccgggcgcggcatggtggtgccgtggagcccgcaggacctggtgct 64
Query: 119 ggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggagac 178
|||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 65 cgcgcacccgtccacggcgtgcttcctcacgcactgcggctggaactccacgctggagac 124
Query: 179 catcgcggcgggcgtgcccgtggtggccttcccgcagtggggcgaccagtgcacggacgc 238
|||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 125 gctcgcggcggggcttcccgtggtggcgttcccgcagtggggcgaccagtgcacggacgc 184
Query: 239 caagttcctggtggacgagctcgggatgggtgtccgcctccgcgggccgctgcggcggga 298
||||| ||| ||||| ||| || |||||| || ||| || || |||||||||| ||||
Sbjct: 185 caagtacctcgtggaggagttcaagatgggggtgcgcatcggcacgccgctgcggaggga 244
Query: 299 cgccgtgcgggaggcggtggacgccgcagtggcggggcccgaggccgacgcgatgctcgc 358
| ||||||| || || ||||| | || ||||| ||||| || |||| |||||||||||
Sbjct: 245 ctccgtgcgcgacgccgtggaggacgtcgtggccgggccggacgccggcgcgatgctcga 304
Query: 359 cagcgccaggaggtggagcgcggcggcgcgggaggccgtggcgcccggcgggtcctcgga 418
| ||||| |||| ||||||||||| || ||| |||||| |||||||||| |||||
Sbjct: 305 gaaggccagagcgtggtgcgcggcggcgaggacggcggtggcggccggcgggtcgtcgga 364
Query: 419 cgcgcacgtccaggcgtt 436
| ||||| ||||||||
Sbjct: 365 ccgccacgtacaggcgtt 382
>gb|CV760335.1|CV760335 FGAS054719 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 877
Score = 256 bits (129), Expect = 2e-066
Identities = 288/341 (84%)
Strand = Plus / Plus
Query: 96 tggagcccccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgc 155
|||||||| || |||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 108 tggagcccgcacgacctggtgctggcgcacccgtccacggcgtgcttcctcacgcactgc 167
Query: 156 gggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggccttcccgcag 215
|| ||||||||||| |||||||| |||||||||| | ||||||||||| |||||||||
Sbjct: 168 ggctggaactccacgctggagacgctcgcggcggggcttcccgtggtggcgttcccgcag 227
Query: 216 tggggcgaccagtgcacggacgccaagttcctggtggacgagctcgggatgggtgtccgc 275
|||||||||||||||||||||||||||| ||| ||||| ||| || |||||| || |||
Sbjct: 228 tggggcgaccagtgcacggacgccaagtacctcgtggaggagttcaagatgggggtgcgc 287
Query: 276 ctccgcgggccgctgcggcgggacgccgtgcgggaggcggtggacgccgcagtggcgggg 335
|| || |||||||||| ||||||||||||| || || ||||| | || ||||| |||
Sbjct: 288 atcggcacgccgctgcggagggacgccgtgcgcgacgccgtggaggacgtcgtggccggg 347
Query: 336 cccgaggccgacgcgatgctcgccagcgccaggaggtggagcgcggcggcgcgggaggcc 395
|| || |||| ||||||||||| || |||||| ||||||||||||||| || ||||
Sbjct: 348 ccggacgccggcgcgatgctcgacaaggccagggcgtggagcgcggcggcaaggacggcc 407
Query: 396 gtggcgcccggcgggtcctcggacgcgcacgtccaggcgtt 436
|||||| |||||||||| |||||| ||||| ||||||||
Sbjct: 408 gtggcggccggcgggtcgtcggaccgccacgtacaggcgtt 448
>gb|CA688333.1|CA688333 wlm96.pk040.d13 wlm96 Triticum aestivum cDNA clone wlm96.pk040.d13
5' end, mRNA sequence
Length = 390
Score = 206 bits (104), Expect = 2e-051
Identities = 223/265 (84%)
Strand = Plus / Plus
Query: 43 tgctgccggacgggttcctggactccgtggccgggcgcggcgcggtggtgccttggagcc 102
|||| ||||| |||| |||||||||||| |||||||||||| ||||||||| |||||||
Sbjct: 85 tgctcccggaggggtacctggactccgtcgccgggcgcggcatggtggtgccgtggagcc 144
Query: 103 cccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtgga 162
| || |||| ||||| ||||| |||||||| | |||||||||| ||| ||||||||||
Sbjct: 145 cgcangacctggtgctcgcgcanccgtccacggggtgcttcctcangcantgcgggtgga 204
Query: 163 actccaccctggagaccatcgcggcgggcgtgcccgtggtggccttcccgcagtggggcg 222
||||||| |||||||| |||||||||| | ||||||||||| |||||||| |||||||
Sbjct: 205 actccacgctggagacgctcgcggcggggcttcccgtggtggcgttcccgcantggggcg 264
Query: 223 accagtgcacggacgccaagttcctggtggacgagctcgggatgggtgtccgcctccgcg 282
| ||||||||||||||||||| ||| ||||| ||| || |||||| || ||| || ||
Sbjct: 265 ancagtgcacggacgccaagtacctcgtggaggagttcaagatgggggtgcgcatcggca 324
Query: 283 ggccgctgcggcgggacgccgtgcg 307
||||||||| ||||| |||||||
Sbjct: 325 cnccgctgcggagggactccgtgcg 349
>gb|BG908559.1|BG908559 TaLr1169D04F TaLr1 Triticum aestivum cDNA clone TaLr1169D04 3',
mRNA sequence
Length = 642
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactccaccctggaga 177
||||||||||||||||||||||||||||| ||||||||
Sbjct: 520 gcttcctcacgcactgcgggtggaactccgtcctggaga 482
>gb|CD922960.1|CD922960 G750.105M17F010531 G750 Triticum aestivum cDNA clone G750105M17,
mRNA sequence
Length = 609
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactccaccctggaga 177
||||||||||||||||||||||||||||| ||||||||
Sbjct: 549 gcttcctcacgcactgcgggtggaactccgtcctggaga 511
>gb|CK168486.1|CK168486 FGAS043018 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1181
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactccaccctggaga 177
||||||||||||||||||||||||||||| ||||||||
Sbjct: 616 gcttcctcacgcactgcgggtggaactccgtcctggaga 578
>gb|BG313174.1|BG313174 WHE2054_F07_L14ZS Wheat salt-stressed sheath cDNA library Triticum
aestivum cDNA clone WHE2054_F07_L14, mRNA sequence
Length = 376
Score = 60.0 bits (30), Expect = 2e-007
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
|||| |||||||| |||||||||||||||| ||||| | ||||||| |||||||||
Sbjct: 179 cttcttcacgcacagcgggtggaactccacngtggaggcgatcgcggagggcgtgcc 235
>gb|CD871509.1|CD871509 AZO2.118G11R010403 AZO2 Triticum aestivum cDNA clone AZO2118G11,
mRNA sequence
Length = 799
Score = 58.0 bits (29), Expect = 1e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 111 cgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactccacc 170
|||||||| ||||||| ||| |||||||||| | |||||||||||||||||||||||
Sbjct: 407 cgcgtgctctcgcacccctccgtcgcctgcttcgtgtcgcactgcgggtggaactccacc 348
Query: 171 ctgga 175
||||
Sbjct: 347 atgga 343
>gb|CA625114.1|CA625114 wl1n.pk0123.c12 wl1n Triticum aestivum cDNA clone wl1n.pk0123.c12
5' end, mRNA sequence
Length = 503
Score = 56.0 bits (28), Expect = 4e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 145 tcacgcactgcgggtggaactccaccctggag 176
||||||||||||||||||||||||| ||||||
Sbjct: 102 tcacgcactgcgggtggaactccacgctggag 133
>gb|CA741400.1|CA741400 wia1c.pk002.l7 wia1c Triticum aestivum cDNA clone wia1c.pk002.l7 5'
end, mRNA sequence
Length = 498
Score = 56.0 bits (28), Expect = 4e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 154 gcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
|||| ||||||||||| ||||||||| | |||||||||||||| |||||||
Sbjct: 7 gcggatggaactccacgctggagaccgtggcggcgggcgtgccgatggtggc 58
>gb|CD874269.1|CD874269 AZO3.101M04R011123 AZO3 Triticum aestivum cDNA clone AZO3101M04,
mRNA sequence
Length = 657
Score = 56.0 bits (28), Expect = 4e-006
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactc 166
||||||||||||||||||||||||||||
Sbjct: 557 gcttcctcacgcactgcgggtggaactc 530
>gb|CD926713.1|CD926713 GR45.001N13R001013 GR45 Triticum aestivum cDNA clone GR45001N13,
mRNA sequence
Length = 726
Score = 56.0 bits (28), Expect = 4e-006
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactc 166
||||||||||||||||||||||||||||
Sbjct: 494 gcttcctcacgcactgcgggtggaactc 467
>gb|BQ802490.1|BQ802490 WHE2826_E05_I10ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2826_E05_I10, mRNA
sequence
Length = 714
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggag 176
|||||| | |||||||||||||||||||| |||||||||
Sbjct: 180 tgcttcgtgacgcactgcgggtggaactcgaccctggag 218
>gb|CA733021.1|CA733021 wlp1c.pk006.f2 wlp1c Triticum aestivum cDNA clone wlp1c.pk006.f2 5'
end, mRNA sequence
Length = 515
Score = 54.0 bits (27), Expect = 2e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
|||||||| |||||| ||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 292 tgcttcctgacgcacgccgggtggaactccacgttggagggcatcgcggagggcgtgcc 350
>gb|BG905373.1|BG905373 TaLr1139C08F TaLr1 Triticum aestivum cDNA clone TaLr1139C08 3',
mRNA sequence
Length = 625
Score = 52.0 bits (26), Expect = 6e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 134 cgcctgcttcctcacgcactgcgggtggaactcc 167
|||| ||||||||||||||||||| |||||||||
Sbjct: 488 cgccggcttcctcacgcactgcggctggaactcc 455
>gb|BJ295748.1|BJ295748 BJ295748 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl5e11 3', mRNA sequence
Length = 729
Score = 52.0 bits (26), Expect = 6e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
||||||||||||||||||||||| ||||||
Sbjct: 639 acgcactgcgggtggaactccacgctggag 610
>gb|CN012928.1|CN012928 WHE3954_F06_L12ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3954_F06_L12,
mRNA sequence
Length = 578
Score = 52.0 bits (26), Expect = 6e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagacc 179
|||||| | ||||||||||| ||||||||||| |||||||||
Sbjct: 159 tgcttcgtgacgcactgcggctggaactccacgctggagacc 200
>gb|DR733077.1|DR733077 FGAS077332 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1030
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
||||||||||| ||||||||| ||||||||| | ||||||||||||||
Sbjct: 517 acgcactgcggatggaactccgtcctggagacggtggcggcgggcgtgcc 468
>gb|CA714936.1|CA714936 wdk3c.pk022.k16 wdk3c Triticum aestivum cDNA clone wdk3c.pk022.k16
5' end, mRNA sequence
Length = 441
Score = 50.1 bits (25), Expect = 2e-004
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| | |||||||||||||||||||| | ||||||| ||||||| ||||||||
Sbjct: 17 tgcttcgtgacgcactgcgggtggaactcggcgctggagagcatcgcgtgcggcgtgcct 76
Query: 198 gtggtggccttcccgcagtgg 218
|| | |||| | |||||||||
Sbjct: 77 gtcgcggccgtgccgcagtgg 97
>gb|CD876252.1|CD876252 AZO3.109B21R011126 AZO3 Triticum aestivum cDNA clone AZO3109B21,
mRNA sequence
Length = 700
Score = 50.1 bits (25), Expect = 2e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 117 ctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| | ||| | | ||||||||||||||||||| |||||||
Sbjct: 291 ctggcgcacccgtccaccggcgcgttcatgagccactgcgggtggaactccatcctggag 232
Query: 177 a 177
|
Sbjct: 231 a 231
>gb|CV764475.1|CV764475 FGAS058860 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 825
Score = 50.1 bits (25), Expect = 2e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| | |||||||||||||||||||| | ||||||| ||||||| ||||||||
Sbjct: 690 tgcttcgtgacgcactgcgggtggaactcggcgctggagagcatcgcgtgcggcgtgcct 631
Query: 198 gtggtggcc 206
|| ||||||
Sbjct: 630 gtcgtggcc 622
>gb|BE496865.1|BE496865 WHE0761_D01_H01ZS Wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0761_D01_H01, mRNA
sequence
Length = 614
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 154 gcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
|||| ||||||||||| ||||||||| | ||||| |||||||| |||||||
Sbjct: 168 gcggatggaactccacgctggagaccgtggcggcaggcgtgccgatggtggc 219
>gb|CA711259.1|CA711259 wdk2c.pk018.m3 wdk2c Triticum aestivum cDNA clone wdk2c.pk018.m3 5'
end, mRNA sequence
Length = 366
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggaga 177
|||||| | |||||||||||||||||||| || |||||||
Sbjct: 128 tgcttcgtgacgcactgcgggtggaactcgacgctggaga 167
>gb|CD454260.1|CD454260 WHE1770_D02_H04ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1770_D02_H04, mRNA sequence
Length = 592
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 154 gcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
|||| ||||||||||| ||||||||| | ||||| |||||||| |||||||
Sbjct: 497 gcggatggaactccacgctggagaccgtggcggcaggcgtgccgatggtggc 446
>gb|CD885680.1|CD885680 G118.100B15R010921 G118 Triticum aestivum cDNA clone G118100B15,
mRNA sequence
Length = 597
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggagac 178
||||||||||||||||||||| |||||||||
Sbjct: 525 acgcactgcgggtggaactccgtcctggagac 494
>gb|AJ717208.1|AJ717208 AJ717208 Triticum turgidum subsp. durum etiolated seedling 20 days
Triticum turgidum subsp. durum cDNA clone 11457R, mRNA
sequence
Length = 563
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactccaccctggag 176
|||||| || |||||||||||||||||||| || ||||||
Sbjct: 436 ctgctttctgacgcactgcgggtggaactcgacgctggag 475
>gb|BE488971.1|BE488971 WHE1077_B03_D05ZS Wheat unstressed seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE1077_B03_D05,
mRNA sequence
Length = 636
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 150 cactgcgggtggaactccaccctggag 176
|||||||||||||||||||| ||||||
Sbjct: 173 cactgcgggtggaactccacgctggag 199
>gb|BJ230352.1|BJ230352 BJ230352 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl22g03 3', mRNA sequence
Length = 562
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccac 169
|||||||||||||||||||||||
Sbjct: 492 acgcactgcgggtggaactccac 470
>gb|BQ483250.1|BQ483250 WHE3506_D01_G02ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3506_D01_G02, mRNA sequence
Length = 625
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 141 ttcctcacgcactgcgggtggaactcc 167
||||| |||||||||||||||||||||
Sbjct: 228 ttcctgacgcactgcgggtggaactcc 254
>gb|CK168749.1|CK168749 FGAS043339 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 907
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactccaccctggaga 177
|||||||||||||| ||||||||||| || ||||||||
Sbjct: 678 gcttcctcacgcacggcgggtggaacgccgtcctggaga 640
>gb|BE445694.1|BE445694 WHE1452_G06_M12ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1452_G06_M12,
mRNA sequence
Length = 372
Score = 44.1 bits (22), Expect = 0.015
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 141 ttcctcacgcactgcgggtggaactc 166
||||| ||||||||||||||||||||
Sbjct: 62 ttcctgacgcactgcgggtggaactc 87
>gb|BJ318808.1|BJ318808 BJ318808 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf3h22 3', mRNA sequence
Length = 432
Score = 44.1 bits (22), Expect = 0.015
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggaga 177
||||||||||||||||||| || |||||||
Sbjct: 417 cgcactgcgggtggaactcgacgctggaga 388
>gb|BQ803441.1|BQ803441 WHE2837_F11_K21ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2837_F11_K21, mRNA
sequence
Length = 715
Score = 44.1 bits (22), Expect = 0.015
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 cggcccttcctgtgggtggtccgccc 29
||||| ||||||||||||||||||||
Sbjct: 196 cggccgttcctgtgggtggtccgccc 221
>gb|CA612266.1|CA612266 wr1.pk0139.e8 wr1 Triticum aestivum cDNA clone wr1.pk0139.e8 5'
end, mRNA sequence
Length = 430
Score = 44.1 bits (22), Expect = 0.015
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagacc 179
|||||| | ||||||||||| |||||||||| |||||||||
Sbjct: 22 tgcttcgtgacgcactgcggctggaactccatgctggagacc 63
>gb|CD453031.1|CD453031 WHE1452_G06_M12ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1452_G06_M12,
mRNA sequence
Length = 589
Score = 44.1 bits (22), Expect = 0.015
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 141 ttcctcacgcactgcgggtggaactc 166
||||| ||||||||||||||||||||
Sbjct: 522 ttcctgacgcactgcgggtggaactc 497
>gb|CD867509.1|CD867509 AZO2.106H18R010329 AZO2 Triticum aestivum cDNA clone AZO2106H18,
mRNA sequence
Length = 705
Score = 44.1 bits (22), Expect = 0.015
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
|||||||||||||||||||| |||||||| | ||||||||||||||
Sbjct: 597 acgcactgcgggtggaactcggtgctggagacggtggcggcgggcgtgcc 548
>gb|CD882790.1|CD882790 F1.111D15F010430 F1 Triticum aestivum cDNA clone F1111D15, mRNA
sequence
Length = 730
Score = 44.1 bits (22), Expect = 0.015
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 135 gcctgcttcctcacgcactgcgggtggaactccaccctggag 176
||||||||| | ||||||||||||||||||| ||| |||||
Sbjct: 431 gcctgcttcgtgtcgcactgcgggtggaactcgaccgtggag 472
Score = 44.1 bits (22), Expect = 0.015
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 cggcccttcctgtgggtggtccgccc 29
||||| ||||||||||||||||||||
Sbjct: 281 cggccgttcctgtgggtggtccgccc 306
>gb|CD926341.1|CD926341 G750.121L03F010711 G750 Triticum aestivum cDNA clone G750121L03,
mRNA sequence
Length = 473
Score = 44.1 bits (22), Expect = 0.015
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactcc 167
|||||| | |||||||||||||||||||||
Sbjct: 89 tgcttcgtgacgcactgcgggtggaactcc 118
>gb|CD929102.1|CD929102 GR45.107A07R010611 GR45 Triticum aestivum cDNA clone GR45107A07,
mRNA sequence
Length = 666
Score = 44.1 bits (22), Expect = 0.015
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
||||||| |||||| ||||||||||||| || ||||| |||| ||||||||||||
Sbjct: 514 gcttcctgacgcacagcgggtggaactcgacgacggagagcatctgggcgggcgtgcc 457
>gb|CV761615.1|CV761615 FGAS056003 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 850
Score = 44.1 bits (22), Expect = 0.015
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctgga 175
|||||| | |||||||||||||||||||| || |||||
Sbjct: 499 tgcttcgtgacgcactgcgggtggaactcgacgctgga 536
>gb|CV765720.1|CV765720 FGAS060107 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 851
Score = 44.1 bits (22), Expect = 0.015
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggagacc-atcgcggcgggcgtgcc 196
|||| |||||||| |||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 667 cttcttcacgcacagcggctggaactccacggtggaggccgatcgcggagggcgtgcc 724
>gb|BE213331.1|BE213331 EST0099 Triticum aestivum Lambda Zap Triticum aestivum cDNA clone
JA1_2D_D03_T3 5', mRNA sequence
Length = 588
Score = 42.1 bits (21), Expect = 0.058
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggagacc 179
|||||||| ||||||||||||| | ||||||||
Sbjct: 151 acgcactgtgggtggaactccatcttggagacc 183
>gb|BE400071.1|BE400071 AWB010.C05F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB010.C05, mRNA sequence
Length = 546
Score = 42.1 bits (21), Expect = 0.058
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactcc 167
|||||||||||||||||||||
Sbjct: 103 acgcactgcgggtggaactcc 123
>gb|BM137436.1|BM137436 WHE0475_B01_C01ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0475_B01_C01,
mRNA sequence
Length = 522
Score = 42.1 bits (21), Expect = 0.058
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactcc 167
|||||||||||||||||||||
Sbjct: 444 acgcactgcgggtggaactcc 464
>gb|BJ279179.1|BJ279179 BJ279179 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr1k09 5', mRNA sequence
Length = 482
Score = 42.1 bits (21), Expect = 0.058
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcacgcactgcgggtggaactccac 169
|||| ||||||||||||||||||||
Sbjct: 451 tcacacactgcgggtggaactccac 475
>gb|BJ284242.1|BJ284242 BJ284242 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr1k09 3', mRNA sequence
Length = 717
Score = 42.1 bits (21), Expect = 0.058
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 145 tcacgcactgcgggtggaactccac 169
|||| ||||||||||||||||||||
Sbjct: 368 tcacacactgcgggtggaactccac 344
>gb|BQ483975.1|BQ483975 WHE3515_A05_B09ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3515_A05_B09, mRNA sequence
Length = 545
Score = 42.1 bits (21), Expect = 0.058
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
|||| |||| ||| |||| ||||||||||| ||||| | ||||||| |||||||||
Sbjct: 427 cttcttcacccacagcggctggaactccacggtggaggcgatcgcggagggcgtgcc 483
>gb|AL824749.1|AL824749 AL824749 p:234 Triticum aestivum cDNA clone G05_p234_plate_1, mRNA
sequence
Length = 441
Score = 42.1 bits (21), Expect = 0.058
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactc 166
|||||| | ||||||||||||||||||||
Sbjct: 210 tgcttcgtgacgcactgcgggtggaactc 238
>gb|AL825623.1|AL825623 AL825623 p:234 Triticum aestivum cDNA clone G03_p234_plate_13, mRNA
sequence
Length = 500
Score = 42.1 bits (21), Expect = 0.058
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 114 gtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactc 166
|||||||| | ||||||| || | ||||||||| |||||||||||||||||
Sbjct: 80 gtgctggcccccccgtccgtcggcggcttcctcagccactgcgggtggaactc 132
>gb|CA620385.1|CA620385 wl1n.pk0055.d12 wl1n Triticum aestivum cDNA clone wl1n.pk0055.d12
5' end, mRNA sequence
Length = 620
Score = 42.1 bits (21), Expect = 0.058
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 145 tcacgcactgcgggtggaactccac 169
||||||||||||| |||||||||||
Sbjct: 192 tcacgcactgcggctggaactccac 216
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 243,347
Number of Sequences: 636343
Number of extensions: 243347
Number of successful extensions: 75638
Number of sequences better than 0.5: 85
Number of HSP's better than 0.5 without gapping: 84
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 75500
Number of HSP's gapped (non-prelim): 137
length of query: 804
length of database: 367,240,239
effective HSP length: 19
effective length of query: 785
effective length of database: 355,149,722
effective search space: 278792531770
effective search space used: 278792531770
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)