BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131572.2.6
(1100 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA617503.1|CA617503 wl1n.pk0020.b8 wl1n Triticum aestivu... 666 0.0
gb|CA622992.1|CA622992 wl1n.pk0102.a10 wl1n Triticum aestiv... 585 e-165
gb|CA619704.1|CA619704 wl1n.pk0049.g11 wl1n Triticum aestiv... 454 e-126
gb|CA621784.1|CA621784 wl1n.pk0076.f7 wl1n Triticum aestivu... 442 e-122
gb|CA621172.1|CA621172 wl1n.pk0073.a10 wl1n Triticum aestiv... 329 2e-088
gb|CA625638.1|CA625638 wl1n.pk0140.h5 wl1n Triticum aestivu... 174 8e-042
gb|BJ312697.1|BJ312697 BJ312697 Y. Ogihara unpublished cDNA... 52 8e-005
gb|BJ318406.1|BJ318406 BJ318406 Y. Ogihara unpublished cDNA... 52 8e-005
gb|BJ318685.1|BJ318685 BJ318685 Y. Ogihara unpublished cDNA... 52 8e-005
gb|BJ319360.1|BJ319360 BJ319360 Y. Ogihara unpublished cDNA... 52 8e-005
gb|BJ320160.1|BJ320160 BJ320160 Y. Ogihara unpublished cDNA... 52 8e-005
gb|BJ320181.1|BJ320181 BJ320181 Y. Ogihara unpublished cDNA... 52 8e-005
gb|CA618900.1|CA618900 wl1n.pk0045.a3 wl1n Triticum aestivu... 52 8e-005
gb|CK198831.1|CK198831 FGAS007319 Triticum aestivum FGAS: L... 52 8e-005
gb|CK206299.1|CK206299 FGAS017886 Triticum aestivum FGAS: L... 52 8e-005
gb|CK211353.1|CK211353 FGAS023192 Triticum aestivum FGAS: L... 52 8e-005
gb|BE488623.1|BE488623 WHE1051_H09_O17ZS Wheat unstressed s... 50 3e-004
gb|BJ238195.1|BJ238195 BJ238195 Y. Ogihara unpublished cDNA... 50 3e-004
gb|BJ285116.1|BJ285116 BJ285116 Y. Ogihara unpublished cDNA... 50 3e-004
gb|CA611777.1|CA611777 wr1.pk0134.f7 wr1 Triticum aestivum ... 50 3e-004
gb|CA633858.1|CA633858 wle1n.pk0078.a5 wle1n Triticum aesti... 50 3e-004
gb|CA638638.1|CA638638 wre1n.pk0013.a10 wre1n Triticum aest... 50 3e-004
gb|CA640973.1|CA640973 wre1n.pk0039.e9 wre1n Triticum aesti... 50 3e-004
gb|CA644072.1|CA644072 wre1n.pk0076.h12 wre1n Triticum aest... 50 3e-004
gb|CA644352.1|CA644352 wre1n.pk0078.d11 wre1n Triticum aest... 50 3e-004
gb|CA648168.1|CA648168 wre1n.pk0124.c12 wre1n Triticum aest... 50 3e-004
gb|CK193680.1|CK193680 FGAS002096 Triticum aestivum FGAS: L... 50 3e-004
gb|CK200910.1|CK200910 FGAS009427 Triticum aestivum FGAS: L... 50 3e-004
gb|CA669949.1|CA669949 wlsu1.pk024.e8 wlsu1 Triticum aestiv... 48 0.001
gb|CK154453.1|CK154453 FGAS033155 Triticum aestivum FGAS: T... 48 0.001
gb|BJ231342.1|BJ231342 BJ231342 Y. Ogihara unpublished cDNA... 46 0.005
gb|BJ261725.1|BJ261725 BJ261725 Y. Ogihara unpublished cDNA... 46 0.005
gb|BQ578883.1|BQ578883 WHE0407_H01_P01ZS Wheat etiolated se... 46 0.005
gb|AL828043.1|AL828043 AL828043 p:739 Triticum aestivum cDN... 46 0.005
gb|BQ744463.1|BQ744463 WHE4115_H06_P11ZS Wheat salt-stresse... 46 0.005
gb|CD870768.1|CD870768 AZO2.115H15F010115 AZO2 Triticum aes... 46 0.005
gb|CD871232.1|CD871232 AZO2.117L17F010207 AZO2 Triticum aes... 46 0.005
gb|CD877513.1|CD877513 AZO4.100H15F010925 AZO4 Triticum aes... 46 0.005
gb|CD877832.1|CD877832 AZO4.101D19F011002 AZO4 Triticum aes... 46 0.005
gb|CD878891.1|CD878891 AZO4.103N14F010929 AZO4 Triticum aes... 46 0.005
gb|CK203938.1|CK203938 FGAS012473 Triticum aestivum FGAS: L... 46 0.005
gb|CK204270.1|CK204270 FGAS012806 Triticum aestivum FGAS: L... 46 0.005
gb|AJ613559.1|AJ613559 AJ613559 Triticum turgidum subsp. du... 46 0.005
gb|AJ614654.1|AJ614654 AJ614654 Triticum turgidum subsp. du... 46 0.005
gb|BQ789164.1|BQ789164 WHE4158_C08_F16ZS Wheat CS whole pla... 44 0.020
gb|CA646615.1|CA646615 wre1n.pk0106.e9 wre1n Triticum aesti... 44 0.020
gb|CK154644.1|CK154644 FGAS033346 Triticum aestivum FGAS: T... 44 0.020
gb|BJ285804.1|BJ285804 BJ285804 Y. Ogihara unpublished cDNA... 42 0.080
gb|BJ322680.1|BJ322680 BJ322680 Y. Ogihara unpublished cDNA... 42 0.080
gb|CA654356.1|CA654356 wre1n.pk161.c5 wre1n Triticum aestiv... 42 0.080
gb|CD867713.1|CD867713 AZO2.106P22R010329 AZO2 Triticum aes... 42 0.080
gb|BF474548.1|BF474548 WHE2102_C11_E22ZS Wheat salt-stresse... 40 0.32
gb|BJ319018.1|BJ319018 BJ319018 Y. Ogihara unpublished cDNA... 40 0.32
gb|BJ319292.1|BJ319292 BJ319292 Y. Ogihara unpublished cDNA... 40 0.32
gb|AL827153.1|AL827153 AL827153 p:638 Triticum aestivum cDN... 40 0.32
gb|AL828035.1|AL828035 AL828035 p:739 Triticum aestivum cDN... 40 0.32
gb|CA638200.1|CA638200 wre1n.pk0006.a4 wre1n Triticum aesti... 40 0.32
gb|CA673276.1|CA673276 wlsu2.pk021.f24 wlsu2 Triticum aesti... 40 0.32
gb|CK154935.1|CK154935 FGAS033653 Triticum aestivum FGAS: T... 40 0.32
gb|CK198521.1|CK198521 FGAS007007 Triticum aestivum FGAS: L... 40 0.32
gb|CV782072.1|CV782072 FGAS076485 Triticum aestivum FGAS: L... 40 0.32
>gb|CA617503.1|CA617503 wl1n.pk0020.b8 wl1n Triticum aestivum cDNA clone wl1n.pk0020.b8 5'
end, mRNA sequence
Length = 494
Score = 666 bits (336), Expect = 0.0
Identities = 384/396 (96%), Gaps = 3/396 (0%)
Strand = Plus / Plus
Query: 292 gttcgaggggatccagtccatgacctactgctgcggtaactttggtgatgacaagggtgc 351
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 gttcgaggggatccagtccatgacctactgctgcggtaacttcggtgatgacaagggtgc 60
Query: 352 cagggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaagat 411
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagggccattgtcaaagccttcccacacataaaatgcactgtgctggcccctcccaagat 120
Query: 412 cattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatgttcag 471
||||||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 121 cattgccaccaaaccggccgatggagcgatgataaactatgtcgaaggtgacatgttcag 180
Query: 472 tttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatga 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatga 240
Query: 532 ggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggatggcgg 591
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 241 ggagtgcgtcaagctcctggctcaatgccggaagg-gattccttcacggaaggatggcgg 299
Query: 592 gaaagttataatcggtgacattatgattgaccactctgggcctatgctggaaactcagct 651
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 300 gaaagttataatcggtgatattatgattgaccactctggg-ctatgctggaaactca-ct 357
Query: 652 cctgatggacatcggcatgatgaccatgacaaaagg 687
||||||||||||||||||||||||||||||||||||
Sbjct: 358 cctgatggacatcggcatgatgaccatgacaaaagg 393
>gb|CA622992.1|CA622992 wl1n.pk0102.a10 wl1n Triticum aestivum cDNA clone wl1n.pk0102.a10
5' end, mRNA sequence
Length = 633
Score = 585 bits (295), Expect = e-165
Identities = 346/362 (95%), Gaps = 1/362 (0%)
Strand = Plus / Plus
Query: 442 gataaactatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgct 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gataaactatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgct 66
Query: 502 aaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccg 561
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 67 aaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagctcctggctcaatgccg 126
Query: 562 gaaggcgattccttcacggaaggatggcgggaaagttataatcggtgacattatgattga 621
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 127 gaaggcgattccttcacggaaggatggcgggaaagttataatcggtgatattatgattga 186
Query: 622 ccactctgggcctatgctggaaactcagctcctgatggacatcggcatgatgaccatgac 681
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 187 ccactctgggcctatgctggaaactcacctcctgatggacatcggcatgatgaccatgac 246
Query: 682 aaaaggacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcagggttc-a 740
||||||||| ||| || |||||||||||| | ||||||||||||||||| ||||| |
Sbjct: 247 aaaaggacggcagagagatgaaaaagaatggagcgagctcttcaccaaagcanggttcaa 306
Query: 741 gcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaagtctatccgtgag 800
||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 307 gcgaatacaagatcctgaaggaatttggagctcgtgttgccttcgaagtctatccgtgag 366
Query: 801 at 802
||
Sbjct: 367 at 368
Score = 42.1 bits (21), Expect = 0.080
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 863 ataaatgaagagggtgggtgtgctt 887
|||||| ||||||||||||||||||
Sbjct: 449 ataaataaagagggtgggtgtgctt 473
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 801 atatatatttacatacatat 820
||||||||||||||||||||
Sbjct: 385 atatatatttacatacatat 404
>gb|CA619704.1|CA619704 wl1n.pk0049.g11 wl1n Triticum aestivum cDNA clone wl1n.pk0049.g11
5' end, mRNA sequence
Length = 577
Score = 454 bits (229), Expect = e-126
Identities = 319/345 (92%), Gaps = 3/345 (0%)
Strand = Plus / Plus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||
Sbjct: 39 tcctacctcctggtggacggcatccctcacgaggaccacatgaaccacaccgctctggtg 98
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||| |
Sbjct: 99 ctcacctgcacctcgacgcgctacatcgaggcggggatagggctggcggagtggttcaag 158
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 190
| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 agggacgtggtcacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 218
Query: 191 atgggcagcctcgacgcagatttccacgacat-ggcgagcgacgcctt-ggacacccacg 248
||||| |||||||||||||||||||||||||| ||||||||| ||||| |||| ||||||
Sbjct: 219 atggggagcctcgacgcagatttccacgacatgggcgagcgaggccttgggacgcccacg 278
Query: 249 acaacttcggcgtcgagatggcgctgcgggagttcagggacttgttcgaggggatccagt 308
||||||||||| ||||||| || ||||||| |||| |||||||||||||||||||||||
Sbjct: 279 acaacttcggcatcgagatagctatgcggga-ttcaaggacttgttcgaggggatccagt 337
Query: 309 ccatgacctactgctgcggtaactttggtgatgacaagggtgcca 353
||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 338 ccatgacctactgctgcggtaacttcggtgatgacaagggtgcca 382
>gb|CA621784.1|CA621784 wl1n.pk0076.f7 wl1n Triticum aestivum cDNA clone wl1n.pk0076.f7 5'
end, mRNA sequence
Length = 635
Score = 442 bits (223), Expect = e-122
Identities = 292/313 (93%), Gaps = 2/313 (0%)
Strand = Plus / Plus
Query: 153 tcgaggagctgcacggggcgactctgttccacgagagcatgggcagcctcgacgcagatt 212
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 tcgaggagctgcacggggcgactctgttccacgagagcatggggagcctcgacgcagatt 60
Query: 213 tccacgacatggcgagcgacgccttggacacccacgacaacttcggcgtcgagatggcgc 272
||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 61 tccacgacatggcgagcgaggccttggacgcccacgacaacttcggcatcgagatagcta 120
Query: 273 tgcgggagttcagggacttgttcgaggggatccagtccatgacctactgctgcggtaact 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcgggagttcagggacttgttcgaggggatccagtccatgacctactgctgcggtaact 180
Query: 333 ttggtgatgacaagggtgccagggccattgccaaggccttcccacacataaaatgcactg 392
| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 181 tcggtgatgacaagggtgccagggccattgtcaa-accttcccacacataaaatgcactg 239
Query: 393 tgctggcccctcccaagatcattgccgccaaaccggctgatggagtgaagataaactatg 452
||||||||| || ||||| |||||| |||||||||| ||||||| || ||||||||||
Sbjct: 240 tgctggccctcccaaagat-attgccaccaaaccggccgatggagcgatgataaactatn 298
Query: 453 tcgaaggtgacat 465
||||| |||||||
Sbjct: 299 tcgaangtgacat 311
>gb|CA621172.1|CA621172 wl1n.pk0073.a10 wl1n Triticum aestivum cDNA clone wl1n.pk0073.a10
5' end, mRNA sequence
Length = 657
Score = 329 bits (166), Expect = 2e-088
Identities = 216/229 (94%), Gaps = 3/229 (1%)
Strand = Plus / Plus
Query: 279 agttcagggacttgttcgaggggatccagtccatgacctactgctgcggtaactttggtg 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 agttcagggacttgttcgaggggatccagtccatgacctactgctgcggtaacttcggtg 60
Query: 339 atgacaagggtgccagggccattgccaaggccttcccacacataaaatgcactgtgctgg 398
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 61 atgacaagggtgccagggccattgtcaaagccttcccacacataaaatgcactgtgctgg 120
Query: 399 cccctcccaagatcattgccgccaaaccggctgatggagtgaagataaactatgt-cgaa 457
|||||||||||||||||||| |||||||||| ||||||| || |||||||||||| | ||
Sbjct: 121 cccctcccaagatcattgccaccaaaccggccgatggagcgatgataaactatgtccnaa 180
Query: 458 ggtgacatgttcagtttcattccacctgct-caaactgt-cgtgctaaa 504
||||||||||||| || ||||||||||||| |||||||| |||||||||
Sbjct: 181 ggtgacatgttcatttccattccacctgctccaaactgtccgtgctaaa 229
Score = 46.1 bits (23), Expect = 0.005
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 652 cctgatggacatcggcatgatgaccatgacaaaag 686
|||||||| |||| |||||||||||||||||||||
Sbjct: 378 cctgatgg-catccgcatgatgaccatgacaaaag 411
Score = 40.1 bits (20), Expect = 0.32
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 576 cacggaaggatggcgggaaa 595
||||||||||||||||||||
Sbjct: 302 cacggaaggatggcgggaaa 321
>gb|CA625638.1|CA625638 wl1n.pk0140.h5 wl1n Triticum aestivum cDNA clone wl1n.pk0140.h5 5'
end, mRNA sequence
Length = 480
Score = 174 bits (88), Expect = 8e-042
Identities = 143/159 (89%), Gaps = 2/159 (1%)
Strand = Plus / Plus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||
Sbjct: 322 tcctacctcctggtggacggcatccctcacgaggaccacatgaaccacaccgctctggtg 381
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||||||||| ||| ||| ||||||| |||||||||| |
Sbjct: 382 ctcacctgcacctcgacgcgctacatcgaggcggggatanggctggcggagtggttcaag 441
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggg 169
|||||| || ||| ||| ||||||||||||||||||||
Sbjct: 442 aaggacgtggtcac-tca-cgttcgaggagctgcacggg 478
>gb|BJ312697.1|BJ312697 BJ312697 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf11i13 5', mRNA sequence
Length = 482
Score = 52.0 bits (26), Expect = 8e-005
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 355 ggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||| |||||||||||| |||||||| |||| |||| ||| || ||||||
Sbjct: 85 ggccattgtcaaggccttccctcacataaagtgcaatgtgttggaccttcccaa 138
>gb|BJ318406.1|BJ318406 BJ318406 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf11h03 3', mRNA sequence
Length = 420
Score = 52.0 bits (26), Expect = 8e-005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 355 ggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||| |||||||||||| |||||||| |||| |||| ||| || ||||||
Sbjct: 393 ggccattgtcaaggccttccctcacataaagtgcaatgtgttggaccttcccaa 340
>gb|BJ318685.1|BJ318685 BJ318685 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf12n17 3', mRNA sequence
Length = 582
Score = 52.0 bits (26), Expect = 8e-005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 355 ggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||| |||||||||||| |||||||| |||| |||| ||| || ||||||
Sbjct: 475 ggccattgtcaaggccttccctcacataaagtgcaatgtgttggaccttcccaa 422
Score = 40.1 bits (20), Expect = 0.32
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 728 aaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaa 787
||||||||||| ||||| ||||| ||| ||||| | ||||| |||||| || | | |||
Sbjct: 105 aaagcagggtttagcgactacaaaattgtcaagaagcttggagctcgtggtgtcatggaa 46
Query: 788 gtctatcc 795
||||||||
Sbjct: 45 gtctatcc 38
>gb|BJ319360.1|BJ319360 BJ319360 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf8b10 3', mRNA sequence
Length = 626
Score = 52.0 bits (26), Expect = 8e-005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 355 ggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||| |||||||||||| |||||||| |||| |||| ||| || ||||||
Sbjct: 610 ggccattgtcaaggccttccctcacataaagtgcaatgtgttggaccttcccaa 557
Score = 40.1 bits (20), Expect = 0.32
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 728 aaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaa 787
||||||||||| ||||| ||||| ||| ||||| | ||||| |||||| || | | |||
Sbjct: 240 aaagcagggtttagcgactacaaaattgtcaagaagcttggagctcgtggtgtcatggaa 181
Query: 788 gtctatcc 795
||||||||
Sbjct: 180 gtctatcc 173
>gb|BJ320160.1|BJ320160 BJ320160 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf13m11 3', mRNA sequence
Length = 632
Score = 52.0 bits (26), Expect = 8e-005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 355 ggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||| |||||||||||| |||||||| |||| |||| ||| || ||||||
Sbjct: 467 ggccattgtcaaggccttccctcacataaagtgcaatgtgttggaccttcccaa 414
Score = 40.1 bits (20), Expect = 0.32
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 728 aaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaa 787
||||||||||| ||||| ||||| ||| ||||| | ||||| |||||| || | | |||
Sbjct: 97 aaagcagggtttagcgactacaaaattgtcaagaagcttggagctcgtggtgtcatggaa 38
Query: 788 gtctatcc 795
||||||||
Sbjct: 37 gtctatcc 30
>gb|BJ320181.1|BJ320181 BJ320181 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf13o05 3', mRNA sequence
Length = 682
Score = 52.0 bits (26), Expect = 8e-005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 355 ggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||| |||||||||||| |||||||| |||| |||| ||| || ||||||
Sbjct: 459 ggccattgtcaaggccttccctcacataaagtgcaatgtgttggaccttcccaa 406
>gb|CA618900.1|CA618900 wl1n.pk0045.a3 wl1n Triticum aestivum cDNA clone wl1n.pk0045.a3 5'
end, mRNA sequence
Length = 593
Score = 52.0 bits (26), Expect = 8e-005
Identities = 43/46 (93%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 11 tcctacctcctgg-tggaaggcatccctcacgaggaccacatgaac 55
||||||||||||| |||| ||||||||||||||||| |||||||||
Sbjct: 334 tcctacctcctgggtggacggcatccctcacgagga-cacatgaac 378
>gb|CK198831.1|CK198831 FGAS007319 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 850
Score = 52.0 bits (26), Expect = 8e-005
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 699 acgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctca 758
||||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| |||
Sbjct: 452 acgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatca 393
Query: 759 ag 760
||
Sbjct: 392 ag 391
>gb|CK206299.1|CK206299 FGAS017886 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1084
Score = 52.0 bits (26), Expect = 8e-005
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 355 ggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||| |||||||||||| |||||||| |||| |||| ||| || ||||||
Sbjct: 693 ggccattgtcaaggccttccctcacataaagtgcaatgtgttggaccttcccaa 746
>gb|CK211353.1|CK211353 FGAS023192 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1134
Score = 52.0 bits (26), Expect = 8e-005
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 355 ggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||| |||||||||||| |||||||| |||| |||| ||| || ||||||
Sbjct: 742 ggccattgtcaaggccttccctcacataaagtgcaatgtgttggaccttcccaa 689
Score = 40.1 bits (20), Expect = 0.32
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 728 aaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaa 787
||||||||||| ||||| ||||| ||| ||||| | ||||| |||||| || | | |||
Sbjct: 372 aaagcagggtttagcgactacaaaattgtcaagaagcttggagctcgtggtgtcatggaa 313
Query: 788 gtctatcc 795
||||||||
Sbjct: 312 gtctatcc 305
>gb|BE488623.1|BE488623 WHE1051_H09_O17ZS Wheat unstressed seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE1051_H09_O17,
mRNA sequence
Length = 479
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 153 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 212
Query: 760 g 760
|
Sbjct: 213 g 213
>gb|BJ238195.1|BJ238195 BJ238195 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe12p05 3', mRNA sequence
Length = 660
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 353 agggccattgccaaggccttcccacacat 381
||||| |||||||||||||||||||||||
Sbjct: 574 agggcaattgccaaggccttcccacacat 546
>gb|BJ285116.1|BJ285116 BJ285116 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr6k24 3', mRNA sequence
Length = 592
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 348 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 289
Query: 760 g 760
|
Sbjct: 288 g 288
>gb|CA611777.1|CA611777 wr1.pk0134.f7 wr1 Triticum aestivum cDNA clone wr1.pk0134.f7 5'
end, mRNA sequence
Length = 520
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 196 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 255
Query: 760 g 760
|
Sbjct: 256 g 256
>gb|CA633858.1|CA633858 wle1n.pk0078.a5 wle1n Triticum aestivum cDNA clone wle1n.pk0078.a5
5' end, mRNA sequence
Length = 426
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 69 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 128
Query: 760 g 760
|
Sbjct: 129 g 129
>gb|CA638638.1|CA638638 wre1n.pk0013.a10 wre1n Triticum aestivum cDNA clone
wre1n.pk0013.a10 5' end, mRNA sequence
Length = 338
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 62 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 121
Query: 760 g 760
|
Sbjct: 122 g 122
>gb|CA640973.1|CA640973 wre1n.pk0039.e9 wre1n Triticum aestivum cDNA clone wre1n.pk0039.e9
5' end, mRNA sequence
Length = 318
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 82 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 141
Query: 760 g 760
|
Sbjct: 142 g 142
>gb|CA644072.1|CA644072 wre1n.pk0076.h12 wre1n Triticum aestivum cDNA clone
wre1n.pk0076.h12 5' end, mRNA sequence
Length = 495
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 261 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 320
Query: 760 g 760
|
Sbjct: 321 g 321
>gb|CA644352.1|CA644352 wre1n.pk0078.d11 wre1n Triticum aestivum cDNA clone
wre1n.pk0078.d11 5' end, mRNA sequence
Length = 362
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 61 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 120
Query: 760 g 760
|
Sbjct: 121 g 121
>gb|CA648168.1|CA648168 wre1n.pk0124.c12 wre1n Triticum aestivum cDNA clone
wre1n.pk0124.c12 5' end, mRNA sequence
Length = 394
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 74 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 133
Query: 760 g 760
|
Sbjct: 134 g 134
>gb|CK193680.1|CK193680 FGAS002096 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 900
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 473 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 414
Query: 760 g 760
|
Sbjct: 413 g 413
>gb|CK200910.1|CK200910 FGAS009427 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 844
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaa 759
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||
Sbjct: 454 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactacaaaattatcaa 395
Query: 760 g 760
|
Sbjct: 394 g 394
>gb|CA669949.1|CA669949 wlsu1.pk024.e8 wlsu1 Triticum aestivum cDNA clone wlsu1.pk024.e8 5'
end, mRNA sequence
Length = 437
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 728 aaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttg 779
|||||||| ||||||||||| |||||| ||||| || ||||| |||| ||||
Sbjct: 299 aaagcaggattcagcgaatataagattttcaagaaagttggagctcgagttg 350
>gb|CK154453.1|CK154453 FGAS033155 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 920
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 728 aaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaa 787
||||||||||| ||||| ||||| ||| ||||| || ||||| |||||| || | | |||
Sbjct: 495 aaagcagggtttagcgactacaaaattgtcaagaaacttggagctcgtggtgtcatggaa 436
Query: 788 gtctatcc 795
||||||||
Sbjct: 435 gtctatcc 428
>gb|BJ231342.1|BJ231342 BJ231342 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl26h10 3', mRNA sequence
Length = 608
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 353 agggccattgccaaggccttcccacac 379
||||||||| |||||||||||||||||
Sbjct: 604 agggccattaccaaggccttcccacac 578
>gb|BJ261725.1|BJ261725 BJ261725 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh4f04 3', mRNA sequence
Length = 715
Score = 46.1 bits (23), Expect = 0.005
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 728 aaagcagggttcagcgaatacaagattctcaaggaatttggaactcg 774
|||||||| ||||||||||| |||||| ||||| || ||||| ||||
Sbjct: 264 aaagcaggattcagcgaatataagattttcaagaaagttggagctcg 218
>gb|BQ578883.1|BQ578883 WHE0407_H01_P01ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0407_H01_P01, mRNA
sequence
Length = 644
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 110 gggctggccgagtggttcaggaaggac 136
||||||||||| |||||||||||||||
Sbjct: 64 gggctggccgactggttcaggaaggac 90
>gb|AL828043.1|AL828043 AL828043 p:739 Triticum aestivum cDNA clone C11_p739_plate_5_run_2,
mRNA sequence
Length = 645
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 110 gggctggccgagtggttcaggaaggac 136
||||||||||| |||||||||||||||
Sbjct: 434 gggctggccgactggttcaggaaggac 460
>gb|BQ744463.1|BQ744463 WHE4115_H06_P11ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4115_H06_P11, mRNA sequence
Length = 769
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 110 gggctggccgagtggttcaggaaggac 136
||||||||||| |||||||||||||||
Sbjct: 410 gggctggccgactggttcaggaaggac 436
>gb|CD870768.1|CD870768 AZO2.115H15F010115 AZO2 Triticum aestivum cDNA clone AZO2115H15,
mRNA sequence
Length = 715
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 110 gggctggccgagtggttcaggaaggac 136
||||||||||| |||||||||||||||
Sbjct: 453 gggctggccgactggttcaggaaggac 479
>gb|CD871232.1|CD871232 AZO2.117L17F010207 AZO2 Triticum aestivum cDNA clone AZO2117L17,
mRNA sequence
Length = 702
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 110 gggctggccgagtggttcaggaaggac 136
||||||||||| |||||||||||||||
Sbjct: 443 gggctggccgactggttcaggaaggac 469
>gb|CD877513.1|CD877513 AZO4.100H15F010925 AZO4 Triticum aestivum cDNA clone AZO4100H15,
mRNA sequence
Length = 620
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 110 gggctggccgagtggttcaggaaggac 136
||||||||||| |||||||||||||||
Sbjct: 445 gggctggccgactggttcaggaaggac 471
>gb|CD877832.1|CD877832 AZO4.101D19F011002 AZO4 Triticum aestivum cDNA clone AZO4101D19,
mRNA sequence
Length = 673
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 110 gggctggccgagtggttcaggaaggac 136
||||||||||| |||||||||||||||
Sbjct: 452 gggctggccgactggttcaggaaggac 478
>gb|CD878891.1|CD878891 AZO4.103N14F010929 AZO4 Triticum aestivum cDNA clone AZO4103N14,
mRNA sequence
Length = 552
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 110 gggctggccgagtggttcaggaaggac 136
||||||||||| |||||||||||||||
Sbjct: 448 gggctggccgactggttcaggaaggac 474
>gb|CK203938.1|CK203938 FGAS012473 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 824
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 110 gggctggccgagtggttcaggaaggac 136
||||||||||| |||||||||||||||
Sbjct: 551 gggctggccgactggttcaggaaggac 577
>gb|CK204270.1|CK204270 FGAS012806 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 110 gggctggccgagtggttcaggaaggac 136
||||||||||| |||||||||||||||
Sbjct: 550 gggctggccgactggttcaggaaggac 576
>gb|AJ613559.1|AJ613559 AJ613559 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 08916R, mRNA
sequence
Length = 616
Score = 46.1 bits (23), Expect = 0.005
Identities = 80/99 (80%)
Strand = Plus / Plus
Query: 475 cattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgagga 534
|||||||||||||||| |||| |||| |||||||| |||||| | || |||||| ||
Sbjct: 203 cattccacctgctcaagctgtgatgcttaagcttgttctgcacttctggagcgatgaaga 262
Query: 535 gtgcgtcaagcttctggctcaatgccggaaggcgattcc 573
||| |||| | |||||||||||| |||||| |||||
Sbjct: 263 ttgcatcaatatcctggctcaatgcaagaaggccattcc 301
>gb|AJ614654.1|AJ614654 AJ614654 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 10560R, mRNA
sequence
Length = 672
Score = 46.1 bits (23), Expect = 0.005
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 475 cattccacctgctcaaactgtcgtgctaaagcttgtgctgcac 517
|||||||||||||||| |||| |||| |||||||| ||||||
Sbjct: 99 cattccacctgctcaagctgtgatgcttaagcttgttctgcac 141
>gb|BQ789164.1|BQ789164 WHE4158_C08_F16ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4158_C08_F16, mRNA sequence
Length = 721
Score = 44.1 bits (22), Expect = 0.020
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 355 ggccattgccaaggccttcccacacataaa 384
|||||||| |||||||||||| ||||||||
Sbjct: 692 ggccattgtcaaggccttccctcacataaa 721
>gb|CA646615.1|CA646615 wre1n.pk0106.e9 wre1n Triticum aestivum cDNA clone wre1n.pk0106.e9
5' end, mRNA sequence
Length = 246
Score = 44.1 bits (22), Expect = 0.020
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 700 cgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaataca 749
|||||| || |||||| ||||||||| ||||||||||||| ||| ||||
Sbjct: 48 cgaaaatgactggcgtgagctcttcatgaaagcagggttcaccgactaca 97
>gb|CK154644.1|CK154644 FGAS033346 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 898
Score = 44.1 bits (22), Expect = 0.020
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 359 attgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||| |||||||||||| |||||||| |||| |||| ||| || ||||||
Sbjct: 712 attgtcaaggccttccctcacataaagtgcaatgtgttggaccttcccaa 663
Score = 40.1 bits (20), Expect = 0.32
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 728 aaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaa 787
||||||||||| ||||| ||||| ||| ||||| | ||||| |||||| || | | |||
Sbjct: 346 aaagcagggtttagcgactacaaaattgtcaagaagcttggagctcgtggtgtcatggaa 287
Query: 788 gtctatcc 795
||||||||
Sbjct: 286 gtctatcc 279
>gb|BJ285804.1|BJ285804 BJ285804 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr9p20 3', mRNA sequence
Length = 538
Score = 42.1 bits (21), Expect = 0.080
Identities = 66/81 (81%)
Strand = Plus / Minus
Query: 479 ccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgc 538
|||||||||||| | ||| |||| |||||||| |||||| | || ||| ||||| |||
Sbjct: 533 ccacctgctcaagccgtcttgctcaagcttgtactgcacttctggagcgacgaggaatgc 474
Query: 539 gtcaagcttctggctcaatgc 559
|||||| | ||||| ||||||
Sbjct: 473 gtcaagatcctggcacaatgc 453
>gb|BJ322680.1|BJ322680 BJ322680 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf26i13 3', mRNA sequence
Length = 599
Score = 42.1 bits (21), Expect = 0.080
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 353 agggccattgccaaggccttcccacacataaaatgca 389
|||||||||| ||||||||||| |||||||| ||||
Sbjct: 491 agggccattgttaaggccttccctcacataaagtgca 455
>gb|CA654356.1|CA654356 wre1n.pk161.c5 wre1n Triticum aestivum cDNA clone wre1n.pk161.c5 5'
end, mRNA sequence
Length = 510
Score = 42.1 bits (21), Expect = 0.080
Identities = 66/81 (81%)
Strand = Plus / Plus
Query: 479 ccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgc 538
|||||||||||| | ||| |||| |||||||| |||||| | || ||| ||||| |||
Sbjct: 77 ccacctgctcaagccgtcttgctcaagcttgtactgcacttctggagcgacgaggaatgc 136
Query: 539 gtcaagcttctggctcaatgc 559
|||||| | ||||| ||||||
Sbjct: 137 gtcaagatcctggcacaatgc 157
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 200,488
Number of Sequences: 636343
Number of extensions: 200488
Number of successful extensions: 55484
Number of sequences better than 0.5: 62
Number of HSP's better than 0.5 without gapping: 56
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 55358
Number of HSP's gapped (non-prelim): 119
length of query: 1100
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1080
effective length of database: 354,513,379
effective search space: 382874449320
effective search space used: 382874449320
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)