BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131555.2.3
(622 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ169217.1|BQ169217 WHE2164_E07_I14ZT Triticum turgidum ... 127 1e-027
gb|CV766873.1|CV766873 FGAS061260 Triticum aestivum FGAS: L... 127 1e-027
gb|CD924473.1|CD924473 G750.113C12F010706 G750 Triticum aes... 119 2e-025
gb|CD925009.1|CD925009 G750.115I02F010709 G750 Triticum aes... 119 2e-025
gb|BJ249321.1|BJ249321 BJ249321 Y. Ogihara unpublished cDNA... 111 6e-023
gb|BJ254978.1|BJ254978 BJ254978 Y. Ogihara unpublished cDNA... 111 6e-023
gb|CD920146.1|CD920146 G608.116A05F010911 G608 Triticum aes... 111 6e-023
gb|BJ249637.1|BJ249637 BJ249637 Y. Ogihara unpublished cDNA... 109 2e-022
gb|AJ717012.1|AJ717012 AJ717012 Triticum turgidum subsp. du... 101 6e-020
gb|BF474026.1|BF474026 WHE0840_B07_D14ZS Wheat vernalized c... 96 3e-018
gb|BQ842382.1|BQ842382 WHE2992_C06_E12ZS Wheat dormant embr... 96 3e-018
gb|CD906716.1|CD906716 G468.105F22R010929 G468 Triticum aes... 96 3e-018
gb|CD912774.1|CD912774 G550.115N01R010903 G550 Triticum aes... 96 3e-018
gb|BJ311187.1|BJ311187 BJ311187 Y. Ogihara unpublished cDNA... 94 1e-017
gb|BJ311405.1|BJ311405 BJ311405 Y. Ogihara unpublished cDNA... 94 1e-017
gb|BJ217284.1|BJ217284 BJ217284 Y. Ogihara unpublished cDNA... 94 1e-017
gb|BJ274805.1|BJ274805 BJ274805 Y. Ogihara unpublished cDNA... 94 1e-017
gb|BJ275046.1|BJ275046 BJ275046 Y. Ogihara unpublished cDNA... 94 1e-017
gb|CD453526.1|CD453526 WHE0802_A06_A12ZT CS wheat vernalize... 94 1e-017
gb|CD453581.1|CD453581 WHE0809_F07_K13ZT CS wheat vernalize... 94 1e-017
gb|AJ614233.1|AJ614233 AJ614233 Triticum turgidum subsp. du... 94 1e-017
gb|BJ294544.1|BJ294544 BJ294544 Y. Ogihara unpublished cDNA... 90 2e-016
gb|BF293181.1|BF293181 WHE2164_E07_I14ZS Triticum turgidum ... 84 1e-014
gb|CD912803.1|CD912803 G550.115O22R010904 G550 Triticum aes... 84 1e-014
gb|BQ804817.1|BQ804817 WHE3559_C10_E19ZS Wheat developing g... 82 5e-014
gb|BJ241083.1|BJ241083 BJ241083 Y. Ogihara unpublished cDNA... 78 8e-013
gb|CD917848.1|CD917848 G608.106P16R011025 G608 Triticum aes... 72 5e-011
gb|CA637547.1|CA637547 wre1.pk0007.g2 wre1 Triticum aestivu... 66 3e-009
gb|BQ841947.1|BQ841947 WHE2987_B06_C11ZS Wheat dormant embr... 56 3e-006
gb|CD917847.1|CD917847 G608.106P16F010906 G608 Triticum aes... 56 3e-006
gb|CA632030.1|CA632030 wle1n.pk0050.e1 wle1n Triticum aesti... 54 1e-005
gb|CV764887.1|CV764887 FGAS059272 Triticum aestivum FGAS: L... 46 0.003
gb|AJ602569.1|AJ602569 AJ602569 T06 Triticum aestivum cDNA ... 44 0.011
gb|CA675588.1|CA675588 wlsu2.pk027.j2 wlsu2 Triticum aestiv... 40 0.18
gb|CA695894.1|CA695894 wlmk8.pk0017.c6 wlmk8 Triticum aesti... 40 0.18
gb|CA735308.1|CA735308 wpi1s.pk004.c10 wpi1s Triticum aesti... 40 0.18
gb|CA742975.1|CA742975 wri1s.pk004.o4 wri1s Triticum aestiv... 40 0.18
gb|CA746570.1|CA746570 wri2s.pk004.o5 wri2s Triticum aestiv... 40 0.18
>gb|BQ169217.1|BQ169217 WHE2164_E07_I14ZT Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2164_E07_I14, mRNA sequence
Length = 634
Score = 127 bits (64), Expect = 1e-027
Identities = 160/192 (83%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| |||||| ||||||||||||| | |||||||||||| |||
Sbjct: 301 tttttgggataagtgtacattggatataaggtcttcagtacgcttatcatatcagagact 360
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||| || | ||||||||||||||| ||||||||||| ||||| ||||| || ||||
Sbjct: 361 tttactggttttgaactgcagatgtaccgtccagacgcctctggattttcatatgccaat 420
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || ||||||||||| |||||||| | ||| |||||| | ||||| |||||
Sbjct: 421 agaagagcatcggcaacatcacggacatccactacattcctgagtttattttctacagta 480
Query: 580 tcgcgatctcct 591
|| || ||||||
Sbjct: 481 tcacgttctcct 492
Score = 54.0 bits (27), Expect = 1e-005
Identities = 84/103 (81%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| ||||||| |||| |||||||||||||||| || |||| | |||| |
Sbjct: 161 tggatgctcagttcaggacgccagatgctttgtaggattccacgctgtcccccagggtct 220
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| || ||||| ||||||||
Sbjct: 221 tctctaaaggcctgaaggtccaccctaggttctgaagtttctc 263
>gb|CV766873.1|CV766873 FGAS061260 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 869
Score = 127 bits (64), Expect = 1e-027
Identities = 160/192 (83%)
Strand = Plus / Minus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| |||||| ||||||||||||| | |||||||||||| |||
Sbjct: 581 tttttgggataagtgtacattggatataaggtcttcagtacgcttatcatatcagagact 522
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||| || | ||||||||||||||| ||||||||||| ||||| ||||| || ||||
Sbjct: 521 tttactggttttgaactgcagatgtaccgtccagacgcctctggattttcatatgccaat 462
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || ||||||||||| |||||||| | ||| |||||| | ||||| |||||
Sbjct: 461 agaagagcatcggcaacatcacggacatccactacattcctgagtttattttctacagta 402
Query: 580 tcgcgatctcct 591
|| || ||||||
Sbjct: 401 tcacgttctcct 390
>gb|CD924473.1|CD924473 G750.113C12F010706 G750 Triticum aestivum cDNA clone G750113C12,
mRNA sequence
Length = 667
Score = 119 bits (60), Expect = 2e-025
Identities = 159/192 (82%)
Strand = Plus / Minus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| |||||| ||||||||||||| | |||||||||||| |||
Sbjct: 529 tttttgggataagtgtacattggatataaggtcttcagtacgcttatcatatcagagact 470
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||| || | ||||||||||||||| ||||||||||| ||||| ||||| || |||
Sbjct: 469 tttactggttttgaactgcagatgtaccgtccagacgcctctggattttcatatgcccat 410
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || ||||||||||| |||||||| | ||| |||||| | ||||| |||||
Sbjct: 409 agaagagcatcggcaacatcacggacatccactacattcctgagtttattttctacagta 350
Query: 580 tcgcgatctcct 591
|| || ||||||
Sbjct: 349 tcacgttctcct 338
>gb|CD925009.1|CD925009 G750.115I02F010709 G750 Triticum aestivum cDNA clone G750115I02,
mRNA sequence
Length = 527
Score = 119 bits (60), Expect = 2e-025
Identities = 159/192 (82%)
Strand = Plus / Minus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| |||||| ||||||||||||| | |||||||||||| |||
Sbjct: 225 tttttgggataagtgtacattggatataaggtcttcagtacgcttatcatatcagagact 166
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||| || | ||||||||||||||| ||||||||||| ||||| ||||| || |||
Sbjct: 165 tttactggttttgaactgcagatgtaccgtccagacgcctctggattttcatatgcccat 106
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || ||||||||||| |||||||| | ||| |||||| | ||||| |||||
Sbjct: 105 agaagagcatcggcaacatcacggacatccactacattcctgagtttattttctacagta 46
Query: 580 tcgcgatctcct 591
|| || ||||||
Sbjct: 45 tcacgttctcct 34
Score = 54.0 bits (27), Expect = 1e-005
Identities = 84/103 (81%)
Strand = Plus / Minus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| ||||||| |||| |||||||||||||||| || |||| | |||| |
Sbjct: 365 tggatgctcagttcaggacgccagatgctttgtaggattccacgctgtcccccagggtct 306
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| || ||||| ||||||||
Sbjct: 305 tctctaaaggcctgaaggtccaccctaggttctgaagtttctc 263
>gb|BJ249321.1|BJ249321 BJ249321 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf10g13 3', mRNA sequence
Length = 656
Score = 111 bits (56), Expect = 6e-023
Identities = 143/172 (83%)
Strand = Plus / Plus
Query: 420 tggatacaaggtcttcagtatgtttatcatatcagcaacttttattgcatgtgaactgca 479
|||||| ||||||||||||| | |||||||||||| ||||||| || | |||||||||
Sbjct: 357 tggatataaggtcttcagtacgcttatcatatcagagacttttactggttttgaactgca 416
Query: 480 gatgtatcgtccagacgcttctggcttttcgtaagccagaagaagagcgtcagcaacatc 539
||| || ||||||||||| ||||| ||||| || |||| |||||||| || ||||||||
Sbjct: 417 gatataccgtccagacgcctctggattttcatatgccaacagaagagcatcggcaacatc 476
Query: 540 acgaacatccaccatatttctgagtatgttttcaacagtctcgcgatctcct 591
||| |||||||| ||||| |||| | | ||||| ||||| || || ||||||
Sbjct: 477 acggacatccactatattcctgattttattttccacagtgtcacgttctcct 528
>gb|BJ254978.1|BJ254978 BJ254978 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf7l15 3', mRNA sequence
Length = 634
Score = 111 bits (56), Expect = 6e-023
Identities = 143/172 (83%)
Strand = Plus / Plus
Query: 420 tggatacaaggtcttcagtatgtttatcatatcagcaacttttattgcatgtgaactgca 479
|||||| ||||||||||||| | |||||||||||| ||||||| || | |||||||||
Sbjct: 251 tggatataaggtcttcagtacgcttatcatatcagagacttttactggttttgaactgca 310
Query: 480 gatgtatcgtccagacgcttctggcttttcgtaagccagaagaagagcgtcagcaacatc 539
||| || ||||||||||| ||||| ||||| || |||| |||||||| || ||||||||
Sbjct: 311 gatataccgtccagacgcctctggattttcatatgccaacagaagagcatcggcaacatc 370
Query: 540 acgaacatccaccatatttctgagtatgttttcaacagtctcgcgatctcct 591
||| |||||||| ||||| |||| | | ||||| ||||| || || ||||||
Sbjct: 371 acggacatccactatattcctgattttattttccacagtgtcacgttctcct 422
>gb|CD920146.1|CD920146 G608.116A05F010911 G608 Triticum aestivum cDNA clone G608116A05,
mRNA sequence
Length = 689
Score = 111 bits (56), Expect = 6e-023
Identities = 143/172 (83%)
Strand = Plus / Minus
Query: 420 tggatacaaggtcttcagtatgtttatcatatcagcaacttttattgcatgtgaactgca 479
|||||| ||||||||||||| | |||||||||||| ||||||| || | |||||||||
Sbjct: 389 tggatataaggtcttcagtacgcttatcatatcagagacttttactggttttgaactgca 330
Query: 480 gatgtatcgtccagacgcttctggcttttcgtaagccagaagaagagcgtcagcaacatc 539
||| || ||||||||||| ||||| ||||| || |||| |||||||| || ||||||||
Sbjct: 329 gatataccgtccagacgcctctggattttcatatgccaacagaagagcatcggcaacatc 270
Query: 540 acgaacatccaccatatttctgagtatgttttcaacagtctcgcgatctcct 591
||| |||||||| ||||| |||| | | ||||| ||||| || || ||||||
Sbjct: 269 acggacatccactatattcctgattttattttccacagtgtcacgttctcct 218
>gb|BJ249637.1|BJ249637 BJ249637 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11n08 3', mRNA sequence
Length = 508
Score = 109 bits (55), Expect = 2e-022
Identities = 121/143 (84%)
Strand = Plus / Plus
Query: 420 tggatacaaggtcttcagtatgtttatcatatcagcaacttttattgcatgtgaactgca 479
|||||| ||||||||||||| | |||||||||||| ||||||| || | |||||||||
Sbjct: 357 tggatataaggtcttcagtacgcttatcatatcagagacttttactggttttgaactgca 416
Query: 480 gatgtatcgtccagacgcttctggcttttcgtaagccagaagaagagcgtcagcaacatc 539
||| || ||||||||||| ||||| ||||| || |||| |||||||| || ||||||||
Sbjct: 417 gatataccgtccagacgcctctggattttcatatgccaacagaagagcatcggcaacatc 476
Query: 540 acgaacatccaccatatttctga 562
||| |||||||| ||||| ||||
Sbjct: 477 acggacatccactatattcctga 499
>gb|AJ717012.1|AJ717012 AJ717012 Triticum turgidum subsp. durum etiolated seedling 20 days
Triticum turgidum subsp. durum cDNA clone 09177R, mRNA
sequence
Length = 491
Score = 101 bits (51), Expect = 6e-020
Identities = 136/165 (82%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| |||||| ||||||||||||| | |||||||||||| |||
Sbjct: 311 tttttgggataagtgtacattggatataaggtcttcagtacgcttatcatatcagagact 370
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||| || | ||||||||||||||| ||||||||||| ||||| ||||| || ||||
Sbjct: 371 tttactggttttgaactgcagatgtaccgtccagacgcctctggattttcatatgccaat 430
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagt 564
|||| ||| | |||||||| || |||||||| | ||| ||||||
Sbjct: 431 agaanagcattggcaacatcncggacatccactacattcctgagt 475
Score = 61.9 bits (31), Expect = 5e-008
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| ||||||| |||| |||||||||||||||| || |||| | |||| |
Sbjct: 171 tggatgctcagttcaggacgccagatgctttgtaggattccacgctgtcccccagggtct 230
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 231 tctctaaaggcctgaaggtccaccctagcttctgaagtttctc 273
>gb|BF474026.1|BF474026 WHE0840_B07_D14ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0840_B07_D14, mRNA sequence
Length = 515
Score = 95.6 bits (48), Expect = 3e-018
Identities = 126/152 (82%)
Strand = Plus / Minus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | ||||| |||
Sbjct: 490 tttttgggataagtgtacgttggatataaggtcttcagaatgcttatgacatcagagact 431
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| ||||| || |||| |
Sbjct: 430 tttattcgtactggactgcagatgtaccgtccagatgccgctggattttcatatgccaaa 371
Query: 520 agaagagcgtcagcaacatcacgaacatccac 551
|||||||| || ||||||||||||||||||||
Sbjct: 370 agaagagcatcggcaacatcacgaacatccac 339
>gb|BQ842382.1|BQ842382 WHE2992_C06_E12ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2992_C06_E12, mRNA sequence
Length = 614
Score = 95.6 bits (48), Expect = 3e-018
Identities = 126/152 (82%)
Strand = Plus / Minus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | ||||| |||
Sbjct: 508 tttttgggataagtgtacgttggatataaggtcttcagaatgcttatgacatcagagact 449
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| ||||| || |||| |
Sbjct: 448 tttattcgtactggactgcagatgtaccgtccagatgccgctggattttcatatgccaaa 389
Query: 520 agaagagcgtcagcaacatcacgaacatccac 551
|||||||| || ||||||||||||||||||||
Sbjct: 388 agaagagcatcggcaacatcacgaacatccac 357
>gb|CD906716.1|CD906716 G468.105F22R010929 G468 Triticum aestivum cDNA clone G468105F22,
mRNA sequence
Length = 701
Score = 95.6 bits (48), Expect = 3e-018
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | ||||| |||
Sbjct: 257 tttttgggataagtgtacgttggatataaggtcttcagaatgcttatgacatcagagact 316
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| ||||| || |||| |
Sbjct: 317 tttattcgtactggactgcagatgtaccgtccagatgccgctggattttcatatgccaaa 376
Query: 520 agaagagcgtcagcaacatcacgaacatccac 551
|||||||| || ||||||||||||||||||||
Sbjct: 377 agaagagcatcggcaacatcacgaacatccac 408
Score = 77.8 bits (39), Expect = 8e-013
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| |||||||||||||||| || |||| | ||||| |
Sbjct: 117 tggatgctcagttcaggatgccagatgctttgtaggattcgacgctgtctccgagggtct 176
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 177 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 219
>gb|CD912774.1|CD912774 G550.115N01R010903 G550 Triticum aestivum cDNA clone G550115N01,
mRNA sequence
Length = 710
Score = 95.6 bits (48), Expect = 3e-018
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | ||||| |||
Sbjct: 256 tttttgggataagtgtacgttggatataaggtcttcagaatgcttatgacatcagagact 315
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| ||||| || |||| |
Sbjct: 316 tttattcgtactggactgcagatgtaccgtccagatgccgctggattttcatatgccaaa 375
Query: 520 agaagagcgtcagcaacatcacgaacatccac 551
|||||||| || ||||||||||||||||||||
Sbjct: 376 agaagagcatcggcaacatcacgaacatccac 407
Score = 77.8 bits (39), Expect = 8e-013
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| |||||||||||||||| || |||| | ||||| |
Sbjct: 116 tggatgctcagttcaggatgccagatgctttgtaggattcgacgctgtctccgagggtct 175
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 176 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 218
>gb|BJ311187.1|BJ311187 BJ311187 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd26k18 3', mRNA sequence
Length = 731
Score = 93.7 bits (47), Expect = 1e-017
Identities = 179/223 (80%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | ||||| |||
Sbjct: 262 tttttgggataagtgtatgttggatataaggtcttcagaatgcttatgacatcagagact 321
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| ||||| || ||||||
Sbjct: 322 tttattcgtactggactgcagatgtaccgtccagatgccgctggattttcatatgccaga 381
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || || ||||||||||| ||||| | ||| | || | | ||||| ||||||
Sbjct: 382 agaagagcatcggcgacatcacgaacgtccactagattccagaatctattttctacagtc 441
Query: 580 tcgcgatctcctgtgaaatattcaaggatgattttgctgctcg 622
|| | |||||| ||| ||||| ||||| ||||| |||||||
Sbjct: 442 tcatgttctcctttgagatatttaaggagaattttactgctcg 484
Score = 85.7 bits (43), Expect = 3e-015
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||||||| |||||||||||| |||||||||||||||| || |||| | ||||| |
Sbjct: 122 tggatgttcagttcaggatgccagatgctttgtaggattcgacgctgtctccgagggtct 181
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 182 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 224
>gb|BJ311405.1|BJ311405 BJ311405 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd27k18 3', mRNA sequence
Length = 682
Score = 93.7 bits (47), Expect = 1e-017
Identities = 179/223 (80%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | ||||| |||
Sbjct: 242 tttttgggataagtgtatgttggatataaggtcttcagaatgcttatgacatcagagact 301
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| ||||| || ||||||
Sbjct: 302 tttattcgtactggactgcagatgtaccgtccagatgccgctggattttcatatgccaga 361
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || || ||||||||||| ||||| | ||| | || | | ||||| ||||||
Sbjct: 362 agaagagcatcggcgacatcacgaacgtccactagattccagaatctattttctacagtc 421
Query: 580 tcgcgatctcctgtgaaatattcaaggatgattttgctgctcg 622
|| | |||||| ||| ||||| ||||| ||||| |||||||
Sbjct: 422 tcatgttctcctttgagatatttaaggagaattttactgctcg 464
Score = 85.7 bits (43), Expect = 3e-015
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||||||| |||||||||||| |||||||||||||||| || |||| | ||||| |
Sbjct: 102 tggatgttcagttcaggatgccagatgctttgtaggattcgacgctgtctccgagggtct 161
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 162 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 204
>gb|BJ217284.1|BJ217284 BJ217284 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh15o12 3', mRNA sequence
Length = 618
Score = 93.7 bits (47), Expect = 1e-017
Identities = 179/223 (80%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | | ||| |||
Sbjct: 248 tttttgggataagtgtatgttggatataaggtcttcagaatgcttatgacaacagagact 307
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| |||| || ||||||
Sbjct: 308 tttattcgtactggactgcagatgtaccgtccagatgccgctggatttttatatgccaga 367
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || ||||||||||||||||| |||| ||| | | | | ||||| ||||||
Sbjct: 368 agaagagcatcggcaacatcacgaacatctaccagattccagcttctattttccacagtc 427
Query: 580 tcgcgatctcctgtgaaatattcaaggatgattttgctgctcg 622
|| | |||||| ||| ||||| ||||| |||||||||||||
Sbjct: 428 tcatgttctcctttgagatatttaaggagaattttgctgctcg 470
Score = 71.9 bits (36), Expect = 5e-011
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| ||||||||| |||||| || |||| | ||||| |
Sbjct: 108 tggatgctcatttcaggatgccagatgctttgtnggattcgacgctgtctccgagggtct 167
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 168 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 210
>gb|BJ274805.1|BJ274805 BJ274805 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh4n11 3', mRNA sequence
Length = 665
Score = 93.7 bits (47), Expect = 1e-017
Identities = 179/223 (80%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | | ||| |||
Sbjct: 249 tttttgggataagtgtatgttggatataaggtcttcagaatgcttatgacaacagagact 308
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| |||| || ||||||
Sbjct: 309 tttattcgtactggactgcagatgtaccgtccagatgccgctggatttttatatgccaga 368
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || ||||||||||||||||| |||| ||| | | | | ||||| ||||||
Sbjct: 369 agaagagcatcggcaacatcacgaacatctaccagattccagcttctattttccacagtc 428
Query: 580 tcgcgatctcctgtgaaatattcaaggatgattttgctgctcg 622
|| | |||||| ||| ||||| ||||| |||||||||||||
Sbjct: 429 tcatgttctcctttgagatatttaaggagaattttgctgctcg 471
Score = 77.8 bits (39), Expect = 8e-013
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| |||||||||||||||| || |||| | ||||| |
Sbjct: 109 tggatgctcatttcaggatgccagatgctttgtaggattcgacgctgtctccgagggtct 168
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 169 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 211
>gb|BJ275046.1|BJ275046 BJ275046 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh5n11 3', mRNA sequence
Length = 618
Score = 93.7 bits (47), Expect = 1e-017
Identities = 179/223 (80%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | | ||| |||
Sbjct: 162 tttttgggataagtgtatgttggatataaggtcttcagaatgcttatgacaacagagact 221
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| |||| || ||||||
Sbjct: 222 tttattcgtactggactgcagatgtaccgtccagatgccgctggatttttatatgccaga 281
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || ||||||||||||||||| |||| ||| | | | | ||||| ||||||
Sbjct: 282 agaagagcatcggcaacatcacgaacatctaccagattccagcttctattttccacagtc 341
Query: 580 tcgcgatctcctgtgaaatattcaaggatgattttgctgctcg 622
|| | |||||| ||| ||||| ||||| |||||||||||||
Sbjct: 342 tcatgttctcctttgagatatttaaggagaattttgctgctcg 384
Score = 54.0 bits (27), Expect = 1e-005
Identities = 83/103 (80%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| |||||||| |||||| || |||| ||||| |
Sbjct: 22 tggatgctcatttcaggatgccagatgctttgnnggattcgacgctgtctncgagggtct 81
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| ||| ||||| ||||||| |||||||| ||||||||
Sbjct: 82 tctctacnggcctgaaggtccaccctagcttctgaagtttctc 124
>gb|CD453526.1|CD453526 WHE0802_A06_A12ZT CS wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0802_A06_A12, mRNA sequence
Length = 647
Score = 93.7 bits (47), Expect = 1e-017
Identities = 179/223 (80%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | | ||| |||
Sbjct: 282 tttttgggataagtgtatgttggatataaggtcttcagaatgcttatgacaacagagact 341
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| |||| || ||||||
Sbjct: 342 tttattcgtactggactgcagatgtaccgtccagatgccgctggatttttatatgccaga 401
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || ||||||||||||||||| |||| ||| | | | | ||||| ||||||
Sbjct: 402 agaagagcatcggcaacatcacgaacatctaccagattccagcttctattttccacagtc 461
Query: 580 tcgcgatctcctgtgaaatattcaaggatgattttgctgctcg 622
|| | |||||| ||| ||||| ||||| |||||||||||||
Sbjct: 462 tcatgttctcctttgagatatttaaggagaattttgctgctcg 504
Score = 77.8 bits (39), Expect = 8e-013
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| |||||||||||||||| || |||| | ||||| |
Sbjct: 142 tggatgctcatttcaggatgccagatgctttgtaggattcgacgctgtctccgagggtct 201
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 202 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 244
>gb|CD453581.1|CD453581 WHE0809_F07_K13ZT CS wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0809_F07_K13, mRNA sequence
Length = 724
Score = 93.7 bits (47), Expect = 1e-017
Identities = 179/223 (80%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | | ||| |||
Sbjct: 285 tttttgggataagtgtatgttggatataaggtcttcagaatgcttatgacaacagagact 344
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| |||| || ||||||
Sbjct: 345 tttattcgtactggactgcagatgtaccgtccagatgccgctggatttttatatgccaga 404
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || ||||||||||||||||| |||| ||| | | | | ||||| ||||||
Sbjct: 405 agaagagcatcggcaacatcacgaacatctaccagattccagcttctattttccacagtc 464
Query: 580 tcgcgatctcctgtgaaatattcaaggatgattttgctgctcg 622
|| | |||||| ||| ||||| ||||| |||||||||||||
Sbjct: 465 tcatgttctcctttgagatatttaaggagaattttgctgctcg 507
Score = 77.8 bits (39), Expect = 8e-013
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| |||||||||||||||| || |||| | ||||| |
Sbjct: 145 tggatgctcatttcaggatgccagatgctttgtaggattcgacgctgtctccgagggtct 204
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 205 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 247
>gb|AJ614233.1|AJ614233 AJ614233 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 09925R, mRNA
sequence
Length = 664
Score = 93.7 bits (47), Expect = 1e-017
Identities = 179/223 (80%)
Strand = Plus / Minus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | | ||| |||
Sbjct: 385 tttttgggataagtgtatgttggatataaggtcttcagaatgcttatgacaacagagact 326
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| |||| || ||||||
Sbjct: 325 tttattcgtactggactgcagatgtaccgtccagatgccgctggatttttatatgccaga 266
Query: 520 agaagagcgtcagcaacatcacgaacatccaccatatttctgagtatgttttcaacagtc 579
|||||||| || ||||||||||||||||| |||| ||| | | | | ||||| ||||||
Sbjct: 265 agaagagcatcggcaacatcacgaacatctaccagattccagcttctattttccacagtc 206
Query: 580 tcgcgatctcctgtgaaatattcaaggatgattttgctgctcg 622
|| | |||||| ||| ||||| ||||| |||||||||||||
Sbjct: 205 tcatgttctcctttgagatatttaaggagaattttgctgctcg 163
Score = 77.8 bits (39), Expect = 8e-013
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| |||||||||||||||| || |||| | ||||| |
Sbjct: 525 tggatgctcatttcaggatgccagatgctttgtaggattcgacgctgtctccgagggtct 466
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 465 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 423
>gb|BJ294544.1|BJ294544 BJ294544 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl13f17 3', mRNA sequence
Length = 402
Score = 89.7 bits (45), Expect = 2e-016
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| |||||| ||||||||||||| | |||||||||||| |||
Sbjct: 278 tttttgggataagtgtacattggatataaggtcttcagtacgcttatcatatcagagact 337
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggctttt 508
|||| || | ||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 338 tttactggttttgaactgcagatgtaccgtccagacgcctctggatttt 386
>gb|BF293181.1|BF293181 WHE2164_E07_I14ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2164_E07_I14, mRNA sequence
Length = 534
Score = 83.8 bits (42), Expect = 1e-014
Identities = 101/121 (83%)
Strand = Plus / Minus
Query: 471 tgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccagaagaagagcgtc 530
||||||||||||||| ||||||||||| ||||| ||||| || |||| |||||||| ||
Sbjct: 510 tgaactgcagatgtaccgtccagacgcctctggattttcatatgccaatagaagagcatc 451
Query: 531 agcaacatcacgaacatccaccatatttctgagtatgttttcaacagtctcgcgatctcc 590
||||||||||| |||||||| | ||| ||||| | ||||| ||||| || || |||||
Sbjct: 450 ggcaacatcacggacatccactacattcntgagtttattttctacagtatcacgttctcc 391
Query: 591 t 591
|
Sbjct: 390 t 390
>gb|CD912803.1|CD912803 G550.115O22R010904 G550 Triticum aestivum cDNA clone G550115O22,
mRNA sequence
Length = 494
Score = 83.8 bits (42), Expect = 1e-014
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 400 tttttgggataagggtaagatggatacaaggtcttcagtatgtttatcatatcagcaact 459
||||||||||||| ||| | |||||| ||||||||||| ||| |||| | | ||| |||
Sbjct: 257 tttttgggataagtgtatgttggatataaggtcttcagaatgcttatgacaacagagact 316
Query: 460 tttattgcatgtgaactgcagatgtatcgtccagacgcttctggcttttcgtaagccaga 519
|||||| || |||||||||||| |||||||| || |||| |||| || ||||||
Sbjct: 317 tttattcgtactggactgcagatgtaccgtccagatgccgctggatttttatatgccaga 376
Query: 520 agaagagcgtcagcaacatcacgaacatccacca 553
|||||||| || ||||||||||||||||| ||||
Sbjct: 377 agaagagcatcggcaacatcacgaacatctacca 410
Score = 77.8 bits (39), Expect = 8e-013
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| |||||||||||||||| || |||| | ||||| |
Sbjct: 117 tggatgctcatttcaggatgccagatgctttgtaggattcgacgctgtctccgagggtct 176
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 177 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 219
>gb|BQ804817.1|BQ804817 WHE3559_C10_E19ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3559_C10_E19, mRNA sequence
Length = 819
Score = 81.8 bits (41), Expect = 5e-014
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 474 actgcagatgtatcgtccagacgcttctggcttttcgtaagccagaagaagagcgtcagc 533
|||||||||||| |||||||| || |||| |||| || |||||||||||||| || ||
Sbjct: 762 actgcagatgtaccgtccagatgccgctggatttttatatgccagaagaagagcatcggc 703
Query: 534 aacatcacgaacatccaccatatttctgagtatgttttcaacagtctcgcgatctcctgt 593
||||||||||||||| |||| ||| | | | | ||||| |||||||| | |||||| |
Sbjct: 702 aacatcacgaacatctaccagattccagcttctattttccacagtctcatgttctccttt 643
Query: 594 gaaatattcaaggatgattttgctgctcg 622
|| ||||| ||||| |||||||||||||
Sbjct: 642 gagatatttaaggagaattttgctgctcg 614
>gb|BJ241083.1|BJ241083 BJ241083 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe18l11 3', mRNA sequence
Length = 414
Score = 77.8 bits (39), Expect = 8e-013
Identities = 108/132 (81%)
Strand = Plus / Plus
Query: 420 tggatacaaggtcttcagtatgtttatcatatcagcaacttttattgcatgtgaactgca 479
|||||| ||||||||||||| | |||||||||||| ||||||| || | |||||||||
Sbjct: 279 tggatataaggtcttcagtacgcttatcatatcagagacttttactggttttgaactgca 338
Query: 480 gatgtatcgtccagacgcttctggcttttcgtaagccagaagaagagcgtcagcaacatc 539
|| || |||||| |||| ||||| ||||| || |||| |||| ||| || ||||||||
Sbjct: 339 natataccgtccanacgcctctggattttcatatgccaacagaanagcatcggcaacatc 398
Query: 540 acgaacatccac 551
|| ||||||||
Sbjct: 399 accgacatccac 410
>gb|CD917848.1|CD917848 G608.106P16R011025 G608 Triticum aestivum cDNA clone G608106P16,
mRNA sequence
Length = 484
Score = 71.9 bits (36), Expect = 5e-011
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 474 actgcagatgtatcgtccagacgcttctggcttttcgtaagccagaagaagagcgtcagc 533
|||||||||||| |||||||| || |||| |||| || |||||||||||||| || ||
Sbjct: 346 actgcagatgtaccgtccagatgccgctggatttttatatgccagaagaagagcatcggc 405
Query: 534 aacatcacgaacatccacca 553
||||||||||||||| ||||
Sbjct: 406 aacatcacgaacatctacca 425
Score = 69.9 bits (35), Expect = 2e-010
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| |||||| ||||||||| || |||| | ||||| |
Sbjct: 132 tggatgctcatttcaggatgccagatgcttggtaggattcgacgctgtctccgagggtct 191
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| |||||||| ||||||||
Sbjct: 192 tctctacaggcctgaaggtccaccctagcttctgaagtttctc 234
>gb|CA637547.1|CA637547 wre1.pk0007.g2 wre1 Triticum aestivum cDNA clone wre1.pk0007.g2 5'
end, mRNA sequence
Length = 220
Score = 65.9 bits (33), Expect = 3e-009
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| |||||||||||| |||||||||||||||| || |||| | ||||| |
Sbjct: 109 tggatgctcatttcaggatgccagatgctttgtaggattcgacgctgtctccgagggtct 168
Query: 320 cctctataggcttgaagctccaccccagcttc 351
||||| |||| ||||| ||||||| ||||||
Sbjct: 169 tctctacaggcctgaaggtccacccnagcttc 200
>gb|BQ841947.1|BQ841947 WHE2987_B06_C11ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2987_B06_C11, mRNA sequence
Length = 780
Score = 56.0 bits (28), Expect = 3e-006
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 500 ctggcttttcgtaagccagaagaagagcgtcagcaacatcacgaacatccac 551
|||| ||||| || |||| ||||||||| || ||||||||||||||||||||
Sbjct: 769 ctggattttcatatgccaaaagaagagcatcggcaacatcacgaacatccac 718
>gb|CD917847.1|CD917847 G608.106P16F010906 G608 Triticum aestivum cDNA clone G608106P16,
mRNA sequence
Length = 736
Score = 56.0 bits (28), Expect = 3e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 514 gccagaagaagagcgtcagcaacatcacgaacatccacca 553
|||||||||||||| || ||||||||||||||||| ||||
Sbjct: 731 gccagaagaagagcatcggcaacatcacgaacatctacca 692
>gb|CA632030.1|CA632030 wle1n.pk0050.e1 wle1n Triticum aestivum cDNA clone wle1n.pk0050.e1
5' end, mRNA sequence
Length = 521
Score = 54.0 bits (27), Expect = 1e-005
Identities = 84/103 (81%)
Strand = Plus / Minus
Query: 260 tggatgttcaattcaggatgccaaatgctttgtaggattcaacagtgtcgcggagggatt 319
|||||| ||| ||||||| |||| |||||||||||||||| || |||| | |||| |
Sbjct: 177 tggatgctcagttcaggacgccagatgctttgtaggattccacgctgtcccccagggtct 118
Query: 320 cctctataggcttgaagctccaccccagcttctgcagtttctc 362
||||| |||| ||||| ||||||| || ||||| ||||||||
Sbjct: 117 tctctaaaggcctgaaggtccaccctaggttctgaagtttctc 75
>gb|CV764887.1|CV764887 FGAS059272 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 860
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 519 aagaagagcgtcagcaacatcacgaacatccacca 553
||||||||| || ||||||||||||||||| ||||
Sbjct: 837 aagaagagcatcggcaacatcacgaacatctacca 803
>gb|AJ602569.1|AJ602569 AJ602569 T06 Triticum aestivum cDNA clone H02_T06_plate_15, mRNA
sequence
Length = 331
Score = 44.1 bits (22), Expect = 0.011
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccggcaggtacgaa 22
||||||||||||||||||||||
Sbjct: 4 gcggccgcccggcaggtacgaa 25
>gb|CA675588.1|CA675588 wlsu2.pk027.j2 wlsu2 Triticum aestivum cDNA clone wlsu2.pk027.j2
5' end, mRNA sequence
Length = 448
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccggcaggtacg 20
||||||||||||||||||||
Sbjct: 5 gcggccgcccggcaggtacg 24
>gb|CA695894.1|CA695894 wlmk8.pk0017.c6 wlmk8 Triticum aestivum cDNA clone wlmk8.pk0017.c6
5' end, mRNA sequence
Length = 569
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 558 tctgagtatgttttcaacag 577
||||||||||||||||||||
Sbjct: 163 tctgagtatgttttcaacag 144
>gb|CA735308.1|CA735308 wpi1s.pk004.c10 wpi1s Triticum aestivum cDNA clone wpi1s.pk004.c10
5' end, mRNA sequence
Length = 420
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccggcaggtacg 20
||||||||||||||||||||
Sbjct: 415 gcggccgcccggcaggtacg 396
>gb|CA742975.1|CA742975 wri1s.pk004.o4 wri1s Triticum aestivum cDNA clone wri1s.pk004.o4
5' end, mRNA sequence
Length = 503
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccggcaggtacg 20
||||||||||||||||||||
Sbjct: 1 gcggccgcccggcaggtacg 20
>gb|CA746570.1|CA746570 wri2s.pk004.o5 wri2s Triticum aestivum cDNA clone wri2s.pk004.o5 5'
end, mRNA sequence
Length = 151
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccggcaggtacg 20
||||||||||||||||||||
Sbjct: 147 gcggccgcccggcaggtacg 128
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 129,697
Number of Sequences: 636343
Number of extensions: 129697
Number of successful extensions: 45913
Number of sequences better than 0.5: 38
Number of HSP's better than 0.5 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45809
Number of HSP's gapped (non-prelim): 97
length of query: 622
length of database: 367,240,239
effective HSP length: 19
effective length of query: 603
effective length of database: 355,149,722
effective search space: 214155282366
effective search space used: 214155282366
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)