BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBF12h04.xg.3.2
(747 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE917641.1|BE917641 OV1_6_C05.g1_A002 Ovary 1 (OV1) Sorg... 206 2e-051
gb|BE917718.1|BE917718 OV1_6_C05.b1_A002 Ovary 1 (OV1) Sorg... 206 2e-051
gb|CD424417.1|CD424417 SA1_5_E04.b1_A002 Salicylic acid-tre... 206 2e-051
gb|CD463400.1|CD463400 ETH1_44_B06.b1_A002 Ethylene-treated... 206 2e-051
gb|CD463476.1|CD463476 ETH1_44_B06.g1_A002 Ethylene-treated... 206 2e-051
gb|CF757824.1|CF757824 DSAF1_22_G06.g1_A011 Drought-stresse... 206 2e-051
gb|CF760038.1|CF760038 DSAF1_54_G05.b1_A011 Drought-stresse... 206 2e-051
gb|CF760289.1|CF760289 DSAF1_57_H08.b1_A011 Drought-stresse... 206 2e-051
gb|CF760903.1|CF760903 DSAF1_68_D03.b1_A011 Drought-stresse... 206 2e-051
gb|CF772377.1|CF772377 DSBF1_34_C05.g1_A010 Drought-stresse... 206 2e-051
gb|CN143215.1|CN143215 WOUND1_14_G04.g1_A002 Wounded leaves... 206 2e-051
gb|CN143318.1|CN143318 WOUND1_15_B08.g1_A002 Wounded leaves... 206 2e-051
gb|CN147627.1|CN147627 WOUND1_50_H09.g1_A002 Wounded leaves... 206 2e-051
gb|CN147869.1|CN147869 WOUND1_52_F09.g1_A002 Wounded leaves... 206 2e-051
gb|CN147886.1|CN147886 WOUND1_52_H05.g1_A002 Wounded leaves... 206 2e-051
gb|CN148146.1|CN148146 WOUND1_54_A10.g1_A002 Wounded leaves... 206 2e-051
gb|CN151593.1|CN151593 WOUND1_76_H12.b1_A002 Wounded leaves... 206 2e-051
gb|CN151684.1|CN151684 WOUND1_76_H12.g1_A002 Wounded leaves... 206 2e-051
gb|CX615240.1|CX615240 GABR1_19_A10.b1_A002 GA- or brassino... 206 2e-051
gb|DN552676.1|DN552676 pSHR-RT-MR-H1_G06_C165 pSHR Sorghum ... 206 2e-051
gb|BQ656146.1|BQ656146 pRC1148 Sorghum halepense rhizome cD... 204 8e-051
gb|DN552417.1|DN552417 pSHR-L_C01_C038 pSHR Sorghum halepen... 204 8e-051
gb|CF759952.1|CF759952 DSAF1_53_E01.b1_A011 Drought-stresse... 202 3e-050
gb|CF759969.1|CF759969 DSAF1_53_G08.b1_A011 Drought-stresse... 202 3e-050
gb|CW201942.1|CW201942 104_628_11184833_148_37084_079 Sorgh... 198 5e-049
gb|CF758792.1|CF758792 DSAF1_36_F07.g1_A011 Drought-stresse... 198 5e-049
gb|CN149813.1|CN149813 WOUND1_65_B08.b1_A002 Wounded leaves... 198 5e-049
gb|AI723907.1|AI723907 RHIZ1_32_B07.y1_A001 Rhizome1 (RHIZ1... 196 2e-048
gb|AI724485.1|AI724485 RHIZ1_10_F03.y1_A001 Rhizome1 (RHIZ1... 196 2e-048
gb|CF675631.1|CF675631 SCI Subtractive cDNA library from so... 196 2e-048
gb|CD209089.1|CD209089 HS1_46_E09.b1_A012 Heat-shocked seed... 194 8e-048
gb|CD209182.1|CD209182 HS1_46_E09.g1_A012 Heat-shocked seed... 194 8e-048
gb|CN141802.1|CN141802 WOUND1_2_A05.b1_A002 Wounded leaves ... 192 3e-047
gb|CL153208.1|CL153208 104_337_10780561_114_31367_193 Sorgh... 190 1e-046
gb|CW263284.1|CW263284 104_731_11230602_116_35214_073 Sorgh... 186 2e-045
gb|CW263285.1|CW263285 104_731_11230602_148_35218_073 Sorgh... 186 2e-045
gb|CN141877.1|CN141877 WOUND1_2_A05.g1_A002 Wounded leaves ... 182 3e-044
gb|CN149886.1|CN149886 WOUND1_65_B08.g1_A002 Wounded leaves... 182 3e-044
gb|AI724626.1|AI724626 RHIZ1_11_A01.y1_A001 Rhizome1 (RHIZ1... 180 1e-043
gb|BE363428.1|BE363428 WS1_62_H03.g1_A002 Water-stressed 1 ... 178 5e-043
gb|CB928920.1|CB928920 ABA1_38_F08.b1_A012 Abscisic acid-tr... 178 5e-043
gb|CF771131.1|CF771131 DSBF1_14_D03.g1_A010 Drought-stresse... 176 2e-042
gb|CN151903.1|CN151903 WOUND1_78_A07.g1_A002 Wounded leaves... 174 8e-042
gb|AW746262.1|AW746262 WS1_40_H09.b1_A002 Water-stressed 1 ... 172 3e-041
gb|AW746284.1|AW746284 WS1_40_H09.g1_A002 Water-stressed 1 ... 172 3e-041
gb|CL153209.1|CL153209 104_337_10780561_116_31368_193 Sorgh... 167 2e-039
gb|BF481973.1|BF481973 FM1_19_F10.b1_A003 Floral-Induced Me... 163 3e-038
gb|BF588290.1|BF588290 FM1_39_H11.b1_A003 Floral-Induced Me... 163 3e-038
gb|BF588327.1|BF588327 FM1_40_D04.b1_A003 Floral-Induced Me... 163 3e-038
gb|BG050944.1|BG050944 FM1_54_C06.b1_A003 Floral-Induced Me... 163 3e-038
gb|AI723995.1|AI723995 RHIZ1_27_A01.y1_A001 Rhizome1 (RHIZ1... 161 1e-037
gb|CF770705.1|CF770705 DSBF1_9_G02.b1_A010 Drought-stressed... 161 1e-037
gb|CF770789.1|CF770789 DSBF1_9_G02.g1_A010 Drought-stressed... 161 1e-037
gb|CX615323.1|CX615323 GABR1_19_A10.g1_A002 GA- or brassino... 161 1e-037
gb|AI724655.1|AI724655 RHIZ1_11_C11.y2_A001 Rhizome1 (RHIZ1... 159 4e-037
gb|DN552591.1|DN552591 pSHR-RT-A-H2_F04_C128 pSHR Sorghum h... 159 4e-037
gb|DN552655.1|DN552655 pSHR-RT-MR-H1_B02_C144 pSHR Sorghum ... 159 4e-037
gb|CW201941.1|CW201941 104_628_11184833_116_36934_079 Sorgh... 155 7e-036
gb|AW563477.1|AW563477 LG1_235_E06.b1_A002 Light Grown 1 (L... 155 7e-036
gb|BE356331.1|BE356331 DG1_124_C06.b1_A002 Dark Grown 1 (DG... 155 7e-036
gb|BF705217.1|BF705217 RHIZ2_2_B06.b1_A003 Rhizome2 (RHIZ2)... 155 7e-036
gb|BG411245.1|BG411245 EM1_27_D11.b1_A002 Embryo 1 (EM1) So... 155 7e-036
gb|BG947221.1|BG947221 IP1_3_A02.b1_A002 Immature pannicle ... 155 7e-036
gb|BG948422.1|BG948422 IP1_9_E10.b1_A002 Immature pannicle ... 155 7e-036
gb|BI098310.1|BI098310 IP1_30_G11.b1_A002 Immature pannicle... 155 7e-036
gb|BI139868.1|BI139868 IP1_46_F09.b1_A002 Immature pannicle... 155 7e-036
gb|BI140005.1|BI140005 IP1_48_F09.b1_A002 Immature pannicle... 155 7e-036
gb|CD219923.1|CD219923 CCC1_59_E08.g1_A007 Callus culture/c... 155 7e-036
gb|CD227036.1|CD227036 CCC1_49_G02.g1_A007 Callus culture/c... 155 7e-036
gb|CD227503.1|CD227503 CCC1_51_F11.g1_A007 Callus culture/c... 155 7e-036
gb|CF757015.1|CF757015 DSAF1_12_F01.g1_A011 Drought-stresse... 153 3e-035
gb|CF759959.1|CF759959 DSAF1_53_F01.b1_A011 Drought-stresse... 151 1e-034
gb|BI139876.1|BI139876 IP1_46_G09.b1_A002 Immature pannicle... 147 2e-033
gb|CD206887.1|CD206887 HS1_25_G03.g1_A012 Heat-shocked seed... 147 2e-033
gb|CD208428.1|CD208428 HS1_37_C08.g1_A012 Heat-shocked seed... 147 2e-033
gb|CW473868.1|CW473868 fsbb001f229h02k0 Sorghum methylation... 143 3e-032
gb|BF586231.1|BF586231 FM1_27_D02.b1_A003 Floral-Induced Me... 143 3e-032
gb|CB929020.1|CB929020 ABA1_38_F08.g1_A012 Abscisic acid-tr... 139 4e-031
gb|CL185119.1|CL185119 104_398_10899304_114_32369_050 Sorgh... 133 3e-029
gb|CL185120.1|CL185120 104_398_10899304_116_32373_050 Sorgh... 133 3e-029
gb|CW296077.1|CW296077 104_777_11461298_116_35621_003 Sorgh... 133 3e-029
gb|DN552652.1|DN552652 pSHR-RT-MR-H1_A10_C141 pSHR Sorghum ... 131 1e-028
gb|AI724083.1|AI724083 RHIZ1_5_A10.y2_A001 Rhizome1 (RHIZ1)... 127 2e-027
gb|CB925035.1|CB925035 ABA1_29_G03.g1_A012 Abscisic acid-tr... 125 6e-027
gb|CD228250.1|CD228250 CCC1_6_G05.g1_A007 Callus culture/ce... 123 2e-026
gb|CW026034.1|CW026034 104_227_10488539_114_30509 Sorghum m... 115 6e-024
gb|AI724826.1|AI724826 RHIZ1_9_F12.y2_A001 Rhizome1 (RHIZ1)... 107 1e-021
gb|CW084734.1|CW084734 104_427_10945973_114_32505_019 Sorgh... 84 2e-014
gb|BF481218.1|BF481218 FM1_17_A07.b1_A003 Floral-Induced Me... 78 1e-012
gb|CF759315.1|CF759315 DSAF1_43_F06.b1_A011 Drought-stresse... 78 1e-012
gb|CF761178.1|CF761178 DSAF1_72_B03.b1_A011 Drought-stresse... 78 1e-012
gb|CF771438.1|CF771438 DSBF1_19_D07.g1_A010 Drought-stresse... 78 1e-012
gb|CN142249.1|CN142249 WOUND1_4_F08.g1_A002 Wounded leaves ... 74 2e-011
gb|AI723757.1|AI723757 RHIZ1_11_C10.y1_A001 Rhizome1 (RHIZ1... 68 1e-009
gb|AI724044.1|AI724044 RHIZ1_25_E11.y1_A001 Rhizome1 (RHIZ1... 68 1e-009
gb|AI724154.1|AI724154 RHIZ1_7_F01.y2_A001 Rhizome1 (RHIZ1)... 66 5e-009
gb|AI724270.1|AI724270 RHIZ1_33_C01.y2_A001 Rhizome1 (RHIZ1... 50 3e-004
gb|AI724318.1|AI724318 RHIZ1_34_D01.y1_A001 Rhizome1 (RHIZ1... 50 3e-004
gb|CW296078.1|CW296078 104_777_11461298_148_35625_003 Sorgh... 46 0.005
gb|CW276333.1|CW276333 104_750_11405432_148_35399_032 Sorgh... 44 0.018
gb|CW140990.1|CW140990 104_531_11136073_148_34922_003 Sorgh... 40 0.28
gb|CW467179.1|CW467179 fsbb001f218m07k0 Sorghum methylation... 40 0.28
gb|AI724291.1|AI724291 RHIZ1_33_F08.y2_A001 Rhizome1 (RHIZ1... 40 0.28
gb|AI724323.1|AI724323 RHIZ1_34_E01.y1_A001 Rhizome1 (RHIZ1... 40 0.28
gb|AW745627.1|AW745627 WS1_36_B08.b1_A002 Water-stressed 1 ... 40 0.28
gb|BG356143.1|BG356143 EM1_21_H05.b1_A002 Embryo 1 (EM1) So... 40 0.28
gb|BG464155.1|BG464155 EM1_70_C10.b1_A002 Embryo 1 (EM1) So... 40 0.28
gb|BG464481.1|BG464481 EM1_70_C10.g1_A002 Embryo 1 (EM1) So... 40 0.28
gb|BG649315.1|BG649315 EM1_77_B03.b1_A002 Embryo 1 (EM1) So... 40 0.28
gb|BI139869.1|BI139869 IP1_46_F10.b1_A002 Immature pannicle... 40 0.28
gb|CD219558.1|CD219558 CCC1_57_C02.g1_A007 Callus culture/c... 40 0.28
gb|CD221102.1|CD221102 CCC1_73_F07.g1_A007 Callus culture/c... 40 0.28
gb|CD221136.1|CD221136 CCC1_73_F06.g1_A007 Callus culture/c... 40 0.28
gb|CD224976.1|CD224976 CCC1_37_H11.g1_A007 Callus culture/c... 40 0.28
gb|CD229757.1|CD229757 CCC1_19_D09.g1_A007 Callus culture/c... 40 0.28
>gb|BE917641.1|BE917641 OV1_6_C05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 425
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 90 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 149
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 150 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 209
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 210 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 269
Query: 509 gctgataa 516
||||||||
Sbjct: 270 gctgataa 277
>gb|BE917718.1|BE917718 OV1_6_C05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 502
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 90 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 149
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 150 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 209
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 210 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 269
Query: 509 gctgataa 516
||||||||
Sbjct: 270 gctgataa 277
>gb|CD424417.1|CD424417 SA1_5_E04.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_5_E04_A002 3', mRNA sequence
Length = 504
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 113 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 172
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 173 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 232
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 233 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 292
Query: 509 gctgataa 516
||||||||
Sbjct: 293 gctgataa 300
>gb|CD463400.1|CD463400 ETH1_44_B06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_44_B06_A002 3', mRNA sequence
Length = 627
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 46 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 105
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 106 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 165
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 166 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 225
Query: 509 gctgataa 516
||||||||
Sbjct: 226 gctgataa 233
>gb|CD463476.1|CD463476 ETH1_44_B06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_44_B06_A002 5', mRNA sequence
Length = 687
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 89 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 148
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 149 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 208
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 209 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 268
Query: 509 gctgataa 516
||||||||
Sbjct: 269 gctgataa 276
>gb|CF757824.1|CF757824 DSAF1_22_G06.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_22_G06_A011 3', mRNA sequence
Length = 546
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 98 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 157
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 158 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 217
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 218 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 277
Query: 509 gctgataa 516
||||||||
Sbjct: 278 gctgataa 285
>gb|CF760038.1|CF760038 DSAF1_54_G05.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_54_G05_A011 5', mRNA sequence
Length = 491
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 89 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 148
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 149 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 208
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 209 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 268
Query: 509 gctgataa 516
||||||||
Sbjct: 269 gctgataa 276
>gb|CF760289.1|CF760289 DSAF1_57_H08.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_57_H08_A011 5', mRNA sequence
Length = 505
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 102 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 161
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 162 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 221
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 222 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 281
Query: 509 gctgataa 516
||||||||
Sbjct: 282 gctgataa 289
>gb|CF760903.1|CF760903 DSAF1_68_D03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_68_D03_A011 5', mRNA sequence
Length = 368
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 89 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 148
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 149 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 208
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 209 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 268
Query: 509 gctgataa 516
||||||||
Sbjct: 269 gctgataa 276
>gb|CF772377.1|CF772377 DSBF1_34_C05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_34_C05_A010 3', mRNA sequence
Length = 487
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 102 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 161
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 162 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 221
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 222 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 281
Query: 509 gctgataa 516
||||||||
Sbjct: 282 gctgataa 289
>gb|CN143215.1|CN143215 WOUND1_14_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_14_G04_A002 5', mRNA sequence
Length = 549
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 86 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 145
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 146 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 205
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 206 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 265
Query: 509 gctgataa 516
||||||||
Sbjct: 266 gctgataa 273
>gb|CN143318.1|CN143318 WOUND1_15_B08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_15_B08_A002 5', mRNA sequence
Length = 518
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 92 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 151
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 152 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 211
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 212 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 271
Query: 509 gctgataa 516
||||||||
Sbjct: 272 gctgataa 279
>gb|CN147627.1|CN147627 WOUND1_50_H09.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_H09_A002 5', mRNA sequence
Length = 517
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 97 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 156
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 157 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 216
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 217 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 276
Query: 509 gctgataa 516
||||||||
Sbjct: 277 gctgataa 284
>gb|CN147869.1|CN147869 WOUND1_52_F09.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_52_F09_A002 5', mRNA sequence
Length = 494
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 85 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 144
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 145 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 204
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 205 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 264
Query: 509 gctgataa 516
||||||||
Sbjct: 265 gctgataa 272
>gb|CN147886.1|CN147886 WOUND1_52_H05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_52_H05_A002 5', mRNA sequence
Length = 473
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 89 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 148
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 149 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 208
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 209 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 268
Query: 509 gctgataa 516
||||||||
Sbjct: 269 gctgataa 276
>gb|CN148146.1|CN148146 WOUND1_54_A10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_54_A10_A002 5', mRNA sequence
Length = 481
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 92 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 151
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 152 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 211
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 212 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 271
Query: 509 gctgataa 516
||||||||
Sbjct: 272 gctgataa 279
>gb|CN151593.1|CN151593 WOUND1_76_H12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_76_H12_A002 3', mRNA sequence
Length = 457
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 109 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 168
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 169 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 228
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 229 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 288
Query: 509 gctgataa 516
||||||||
Sbjct: 289 gctgataa 296
>gb|CN151684.1|CN151684 WOUND1_76_H12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_76_H12_A002 5', mRNA sequence
Length = 468
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 97 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 156
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 157 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 216
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 217 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 276
Query: 509 gctgataa 516
||||||||
Sbjct: 277 gctgataa 284
>gb|CX615240.1|CX615240 GABR1_19_A10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_19_A10_A002 3', mRNA sequence
Length = 517
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 168 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 227
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 228 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 287
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 288 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 347
Query: 509 gctgataa 516
||||||||
Sbjct: 348 gctgataa 355
>gb|DN552676.1|DN552676 pSHR-RT-MR-H1_G06_C165 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 631
Score = 206 bits (104), Expect = 2e-051
Identities = 167/188 (88%)
Strand = Plus / Minus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 467 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 408
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 407 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 348
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 347 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 288
Query: 509 gctgataa 516
||||||||
Sbjct: 287 gctgataa 280
>gb|BQ656146.1|BQ656146 pRC1148 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC1148, mRNA sequence
Length = 732
Score = 204 bits (103), Expect = 8e-051
Identities = 166/187 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 145 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 204
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 205 taaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 264
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| |||||||||||||||||| |||
Sbjct: 265 attaccgcaccaaccgcgtccggatcttcgtcgacaccgtcgcccagacgccccatgtcg 324
Query: 509 gctgata 515
|||||||
Sbjct: 325 gctgata 331
>gb|DN552417.1|DN552417 pSHR-L_C01_C038 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 490
Score = 204 bits (103), Expect = 8e-051
Identities = 166/187 (88%)
Strand = Plus / Minus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 391 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 332
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 331 taaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 272
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| |||||||||||||||||| |||
Sbjct: 271 attaccgcaccaaccgcgtccggatcttcgtcgacaccgtcgcccagacgccccatgtcg 212
Query: 509 gctgata 515
|||||||
Sbjct: 211 gctgata 205
>gb|CF759952.1|CF759952 DSAF1_53_E01.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_53_E01_A011 5', mRNA sequence
Length = 499
Score = 202 bits (102), Expect = 3e-050
Identities = 165/186 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| || |||||||||||||
Sbjct: 99 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagcaaagaaggtgatcc 158
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||| | | |||||||| |
Sbjct: 159 tcaaggacaagcctgacgccgacatcgtcgtgctgcccgtcggcacgatcgtgaccgcag 218
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
||| | || ||||| ||||| ||||||||||||| |||||||||||| ||||||||||
Sbjct: 219 attttgtgcccaaccgcgtccggatcttcgtcgacaccgtcgcccagacaccccacatcg 278
Query: 509 gctgat 514
||||||
Sbjct: 279 gctgat 284
>gb|CF759969.1|CF759969 DSAF1_53_G08.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_53_G08_A011 5', mRNA sequence
Length = 382
Score = 202 bits (102), Expect = 3e-050
Identities = 165/186 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| || |||||||||||||
Sbjct: 104 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagcaaagaaggtgatcc 163
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||| | | |||||||| |
Sbjct: 164 tcaaggacaagcctgacgccgacatcgtcgtgctgcccgtcggcacgatcgtgaccgcag 223
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
||| | || ||||| ||||| ||||||||||||| |||||||||||| ||||||||||
Sbjct: 224 attttgtgcccaaccgcgtccggatcttcgtcgacaccgtcgcccagacaccccacatcg 283
Query: 509 gctgat 514
||||||
Sbjct: 284 gctgat 289
>gb|CW201942.1|CW201942 104_628_11184833_148_37084_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184833, DNA
sequence
Length = 649
Score = 198 bits (100), Expect = 5e-049
Identities = 166/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
||||||| |||||||| ||| |||| ||||| | ||||||||| ||||||||||||||||
Sbjct: 38 ccaagacatcgtggccggagttggtggggctcaacgtggaggaagccaagaaggtgatcc 97
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| ||||||||||| || ||||||||||||||||| ||||||| ||
Sbjct: 98 tcaaggacaagcctgacgccgacattgtcgtgctgcccgtcggctcgccggtgaccaggg 157
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||||||||| ||||| ||||||||||||||||||||||||||| || | ||||| |||
Sbjct: 158 attatcgccccaaccgcgtccgcatcttcgtcgacatcgtcgccgaggcaccccatgtcg 217
Query: 509 gctgataa 516
||||||||
Sbjct: 218 gctgataa 225
>gb|CF758792.1|CF758792 DSAF1_36_F07.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_36_F07_A011 3', mRNA sequence
Length = 501
Score = 198 bits (100), Expect = 5e-049
Identities = 166/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 79 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 138
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 139 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 198
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||| ||||||| ||||||||||||||||| |||
Sbjct: 199 attaccgcaccaaccgcgtccggatctttgtcgacacagtcgcccagacgccccatgtcg 258
Query: 509 gctgataa 516
||||||||
Sbjct: 259 gctgataa 266
>gb|CN149813.1|CN149813 WOUND1_65_B08.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_B08_A002 3', mRNA sequence
Length = 523
Score = 198 bits (100), Expect = 5e-049
Identities = 166/188 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 113 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatct 172
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 173 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 232
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 233 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 292
Query: 509 gctgataa 516
||||||||
Sbjct: 293 gctgataa 300
>gb|AI723907.1|AI723907 RHIZ1_32_B07.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 641
Score = 196 bits (99), Expect = 2e-048
Identities = 165/187 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 256 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 315
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 316 taaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 375
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 376 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 435
Query: 509 gctgata 515
|||||||
Sbjct: 436 gctgata 442
>gb|AI724485.1|AI724485 RHIZ1_10_F03.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 523
Score = 196 bits (99), Expect = 2e-048
Identities = 165/187 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 48 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 107
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 108 taaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 167
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 168 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 227
Query: 509 gctgata 515
|||||||
Sbjct: 228 gctgata 234
>gb|CF675631.1|CF675631 SCI Subtractive cDNA library from sorghum infested by greenbug
aphids Sorghum bicolor cDNA clone SCI similar to
Subtilisin-chymotrypsin inhibitor, mRNA sequence
Length = 529
Score = 196 bits (99), Expect = 2e-048
Identities = 165/187 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 99 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 158
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 159 taaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 218
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 219 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 278
Query: 509 gctgata 515
|||||||
Sbjct: 279 gctgata 285
>gb|CD209089.1|CD209089 HS1_46_E09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_46_E09_A012 3', mRNA sequence
Length = 496
Score = 194 bits (98), Expect = 8e-048
Identities = 164/186 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 109 ccaagacgtcgtggccggaggtggtcggaaagagcgtggaggaagccaagaaagtgatcc 168
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 169 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 228
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 229 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 288
Query: 509 gctgat 514
||||||
Sbjct: 289 gctgat 294
>gb|CD209182.1|CD209182 HS1_46_E09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_46_E09_A012 5', mRNA sequence
Length = 512
Score = 194 bits (98), Expect = 8e-048
Identities = 164/186 (88%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| ||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 103 ccaagacgtcgtggccggaggtggtcggaaagagcgtggaggaagccaagaaagtgatcc 162
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 163 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 222
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 223 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 282
Query: 509 gctgat 514
||||||
Sbjct: 283 gctgat 288
>gb|CN141802.1|CN141802 WOUND1_2_A05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_2_A05_A002 3', mRNA sequence
Length = 475
Score = 192 bits (97), Expect = 3e-047
Identities = 160/181 (88%)
Strand = Plus / Plus
Query: 336 gtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcctcaagga 395
||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||
Sbjct: 115 gtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcctcaagga 174
Query: 396 caagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcggattatcg 455
|||||| |||||||||||||| ||||||||||||||||| ||||||| |||||| ||
Sbjct: 175 caagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatggattaccg 234
Query: 456 ccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcggctgata 515
| | ||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 235 caccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcggctgata 294
Query: 516 a 516
|
Sbjct: 295 a 295
>gb|CL153208.1|CL153208 104_337_10780561_114_31367_193 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10780561, DNA
sequence
Length = 670
Score = 190 bits (96), Expect = 1e-046
Identities = 165/188 (87%)
Strand = Plus / Minus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
||||||| |||||||| ||| |||| ||||| | ||||||||| ||||||||||||||||
Sbjct: 650 ccaagacatcgtggccggagttggtggggctcaacgtggaggaagccaagaaggtgatcc 591
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| ||||||||||| || ||||||||||||||||| ||||||| ||
Sbjct: 590 tcaaggacaagcctgacgccgacattgtcgtgctgcccgtcggctcgccggtgaccaggg 531
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||||||||| ||||| |||||||||||||| |||||||||||| || | ||||| |||
Sbjct: 530 attatcgccccaaccgcgtccgcatcttcgtggacatcgtcgccgaggcaccccatgtcg 471
Query: 509 gctgataa 516
||||||||
Sbjct: 470 gctgataa 463
>gb|CW263284.1|CW263284 104_731_11230602_116_35214_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230602, DNA
sequence
Length = 734
Score = 186 bits (94), Expect = 2e-045
Identities = 163/186 (87%)
Strand = Plus / Minus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| || |||||||||||||
Sbjct: 384 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagcaaagaaggtgatcc 325
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||| | | |||||||| |
Sbjct: 324 tcaaggacaagcctgacgccgacatcgtcgtgctgcccgtcggcacgattgtgaccgcag 265
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
||| | || | ||| || || ||||||||||||| |||||||||||| ||||||||||
Sbjct: 264 attttgtgcccagccgcgtgcgtatcttcgtcgacaccgtcgcccagacaccccacatcg 205
Query: 509 gctgat 514
||||||
Sbjct: 204 gctgat 199
>gb|CW263285.1|CW263285 104_731_11230602_148_35218_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230602, DNA
sequence
Length = 739
Score = 186 bits (94), Expect = 2e-045
Identities = 163/186 (87%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| || |||||||||||||
Sbjct: 362 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagcaaagaaggtgatcc 421
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||| | | |||||||| |
Sbjct: 422 tcaaggacaagcctgacgccgacatcgtcgtgctgcccgtcggcacgattgtgaccgcag 481
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
||| | || | ||| || || ||||||||||||| |||||||||||| ||||||||||
Sbjct: 482 attttgtgcccagccgcgtgcgtatcttcgtcgacaccgtcgcccagacaccccacatcg 541
Query: 509 gctgat 514
||||||
Sbjct: 542 gctgat 547
>gb|CN141877.1|CN141877 WOUND1_2_A05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_2_A05_A002 5', mRNA sequence
Length = 491
Score = 182 bits (92), Expect = 3e-044
Identities = 164/188 (87%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||| ||||| |||||||||||| ||||||||||| ||||| || |||||||
Sbjct: 101 ccaagacgtcttggccggaggtggtcgggaaaagcgtggaggaagccaaaaaagtgatcc 160
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 161 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 220
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 221 attaccgcaccaaccgcgtccggatcttcgtcgacacagtcgcccagacgccccatgtcg 280
Query: 509 gctgataa 516
||||||||
Sbjct: 281 gctgataa 288
>gb|CN149886.1|CN149886 WOUND1_65_B08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_B08_A002 5', mRNA sequence
Length = 475
Score = 182 bits (92), Expect = 3e-044
Identities = 164/188 (87%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| ||| |||| ||||||
Sbjct: 88 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagcctagaaagtgatct 147
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 148 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 207
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| |||||||||||| ||||||||||||||||| |||
Sbjct: 208 attaccgcaccaaccgcgtccggatcttcgtcgacgcagtcgcccagacgccccatgtcg 267
Query: 509 gctgataa 516
||||||||
Sbjct: 268 gctgataa 275
>gb|AI724626.1|AI724626 RHIZ1_11_A01.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 488
Score = 180 bits (91), Expect = 1e-043
Identities = 163/187 (87%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||| ||||||||||| |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 97 ccaaaacgtcgtggccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 156
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 157 taaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 216
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| || |||||||||| ||||||||||||||||| |||
Sbjct: 217 attaccgcaccaaccgcgtccggattttcgtcgacacagtcgcccagacgccccatgtcg 276
Query: 509 gctgata 515
|||||||
Sbjct: 277 gctgata 283
>gb|BE363428.1|BE363428 WS1_62_H03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 338
Score = 178 bits (90), Expect = 5e-043
Identities = 162/186 (87%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||||||| |||||||||||| || |||||||||||||
Sbjct: 98 ccaagacgtcgtggccggaggtggtcgggaagagcgtggaggaagcaaagaaggtgatcc 157
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||| | | |||||||| |
Sbjct: 158 tcaaggacaagcctgacgccgacatcgtcgtgctgcccgtcggcacgattgtgaccgcag 217
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
||| | || | ||| || || || |||||||||| |||||||||||| ||||||||||
Sbjct: 218 attttgtgcccagccgcgtgcgtatattcgtcgacaccgtcgcccagacaccccacatcg 277
Query: 509 gctgat 514
||||||
Sbjct: 278 gctgat 283
>gb|CB928920.1|CB928920 ABA1_38_F08.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_38_F08_A012 3', mRNA sequence
Length = 433
Score = 178 bits (90), Expect = 5e-043
Identities = 162/186 (87%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
||||||||||||| || |||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 16 ccaagacgtcgtgcccggaggtggtcgggaagagcgtggaggaagccaagaaagtgatcc 75
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 76 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 135
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| || || ||||||| ||||||||||||||||| |||
Sbjct: 136 attaccgcaccaaccgcgtccggattttggtcgacacagtcgcccagacgccccatgtcg 195
Query: 509 gctgat 514
||||||
Sbjct: 196 gctgat 201
>gb|CF771131.1|CF771131 DSBF1_14_D03.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_14_D03_A010 3', mRNA sequence
Length = 514
Score = 176 bits (89), Expect = 2e-042
Identities = 152/173 (87%)
Strand = Plus / Plus
Query: 331 aagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcctc 390
|||||||||||||| |||||||| || || ||| | ||||| ||||||||||||||||||
Sbjct: 110 aagacgtcgtggccggaggtggttggcctcagcatagaggaagccaagaaggtgatcctc 169
Query: 391 aaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcggat 450
||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 170 aaggacaagcctgacgccgacatcgtcgtgctgcccgtcggctcgaaggtgaccgatgat 229
Query: 451 tatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgcccca 503
|||| ||| ||||| ||||| |||||||||||| ||||||| ||||||||||
Sbjct: 230 tatctgcctgaccgtttccgcgtcttcgtcgacaccgtcgccgagacgcccca 282
>gb|CN151903.1|CN151903 WOUND1_78_A07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_78_A07_A002 5', mRNA sequence
Length = 441
Score = 174 bits (88), Expect = 8e-042
Identities = 163/188 (86%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| ||||||||| || |||||||||||| |||||||| |||||||
Sbjct: 95 ccaagacgtcgtggccggaggtggtcaggaagagcgtggaggaagccaagaaagtgatcc 154
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||
Sbjct: 155 tcaaggacaagcccgacgccgacatcgtcgtgctgcccgtcggctcgccggtgaccatgg 214
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcg 508
|||| ||| | ||||| ||||| |||||||| || ||||||||||||||||| |||
Sbjct: 215 attaccgcaccaaccgcgtccggatcttcgtgaactcagtcgcccagacgccccatgtcg 274
Query: 509 gctgataa 516
||||||||
Sbjct: 275 gctgataa 282
>gb|AW746262.1|AW746262 WS1_40_H09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 548
Score = 172 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||| || || ||| | ||||| ||||||||||||||||
Sbjct: 123 ccaagacgtcgtggccggaggtggttggcctcagcatagaggaagccaagaaggtgatcc 182
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| || ||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 183 tcaaggacaagcctgatgccgacatcgtcgtgctgcccgtcggctcgaaggtgaccggtg 242
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgcccca 503
|||||| ||| |||| |||||| |||||||||||| ||||||| ||||||||||
Sbjct: 243 attatctgcctgaccgcgtccgcgtcttcgtcgacaccgtcgccgagacgcccca 297
>gb|AW746284.1|AW746284 WS1_40_H09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 525
Score = 172 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 329 ccaagacgtcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcc 388
|||||||||||||||| |||||||| || || ||| | ||||| ||||||||||||||||
Sbjct: 123 ccaagacgtcgtggccggaggtggttggcctcagcatagaggaagccaagaaggtgatcc 182
Query: 389 tcaaggacaagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcgg 448
||||||||||||| || ||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 183 tcaaggacaagcctgatgccgacatcgtcgtgctgcccgtcggctcgaaggtgaccggtg 242
Query: 449 attatcgccctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgcccca 503
|||||| ||| |||| |||||| |||||||||||| ||||||| ||||||||||
Sbjct: 243 attatctgcctgaccgcgtccgcgtcttcgtcgacaccgtcgccgagacgcccca 297
>gb|CL153209.1|CL153209 104_337_10780561_116_31368_193 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10780561, DNA
sequence
Length = 503
Score = 167 bits (84), Expect = 2e-039
Identities = 156/180 (86%)
Strand = Plus / Plus
Query: 337 tcgtggcctgaggtggtcgggctgagcgtggaggacgccaagaaggtgatcctcaaggac 396
|||||||| ||| |||| ||||| | |||| |||| ||||||||||||||||||||||||
Sbjct: 250 tcgtggccggagttggtggggctcaacgtgaaggaagccaagaaggtgatcctcaaggac 309
Query: 397 aagccggacgccgacatcgtggtgctgcccgtcggctccgtggtgaccgcggattatcgc 456
|| || ||||||||||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 310 aaacctgacgccgacattgacgtgctgcccgtcggctcgccggtgaccagggattatcgc 369
Query: 457 cctaaccgtgtccgcatcttcgtcgacatcgtcgcccagacgccccacatcggctgataa 516
|| ||||| ||||||||||||||||||||||||||| || | ||||| |||||||||||
Sbjct: 370 cccaaccgcgtccgcatcttcgtcgacatcgtcgccgaggcaccccatgtcggctgataa 429
>gb|BF481973.1|BF481973 FM1_19_F10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 511
Score = 163 bits (82), Expect = 3e-038
Identities = 105/112 (93%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 1 agcaggccatcctccaccggagccgctgaggccgggcgggcgggcgccgcc---aggaga 57
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 387 agcaggccatcctccaccggagccgccgaggccgggcgggcgggcgccgccaggaggaga 328
Query: 58 agcagcgccagcaatgcgagcctcgtcgtcgccgaatctggctccatctcct 109
||||| |||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 327 agcagagccagcaatgcgagcctcttcctcgccgaatctggctccatctcct 276
>gb|BF588290.1|BF588290 FM1_39_H11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 521
Score = 163 bits (82), Expect = 3e-038
Identities = 105/112 (93%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 1 agcaggccatcctccaccggagccgctgaggccgggcgggcgggcgccgcc---aggaga 57
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 393 agcaggccatcctccaccggagccgccgaggccgggcgggcgggcgccgccaggaggaga 334
Query: 58 agcagcgccagcaatgcgagcctcgtcgtcgccgaatctggctccatctcct 109
||||| |||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 333 agcagagccagcaatgcgagcctcttcctcgccgaatctggctccatctcct 282
>gb|BF588327.1|BF588327 FM1_40_D04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 483
Score = 163 bits (82), Expect = 3e-038
Identities = 105/112 (93%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 1 agcaggccatcctccaccggagccgctgaggccgggcgggcgggcgccgcca---ggaga 57
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 392 agcaggccatcctccaccggagccgccgaggccgggcgggcgggcgccgccaggaggaga 333
Query: 58 agcagcgccagcaatgcgagcctcgtcgtcgccgaatctggctccatctcct 109
||||| |||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 332 agcagagccagcaatgcgagcctcttcctcgccgaatctggctccatctcct 281
>gb|BG050944.1|BG050944 FM1_54_C06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 513
Score = 163 bits (82), Expect = 3e-038
Identities = 105/112 (93%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 1 agcaggccatcctccaccggagccgctgaggccgggcgggcgggcgccgcca---ggaga 57
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 392 agcaggccatcctccaccggagccgccgaggccgggcgggcgggcgccgccaggaggaga 333
Query: 58 agcagcgccagcaatgcgagcctcgtcgtcgccgaatctggctccatctcct 109
||||| |||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 332 agcagagccagcaatgcgagcctcttcctcgccgaatctggctccatctcct 281
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 212,363
Number of Sequences: 832831
Number of extensions: 212363
Number of successful extensions: 65018
Number of sequences better than 0.5: 115
Number of HSP's better than 0.5 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64700
Number of HSP's gapped (non-prelim): 266
length of query: 747
length of database: 491,359,669
effective HSP length: 20
effective length of query: 727
effective length of database: 474,703,049
effective search space: 345109116623
effective search space used: 345109116623
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)