BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAD10d05.sg.3.3
(1563 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN137898.1|CN137898 OX1_60_A04.g1_A002 Oxidatively-stres... 1374 0.0
gb|BE918200.1|BE918200 OV1_3_B06.b1_A002 Ovary 1 (OV1) Sorg... 1007 0.0
gb|BE918029.1|BE918029 OV1_1_A06.b1_A002 Ovary 1 (OV1) Sorg... 997 0.0
gb|BG053661.1|BG053661 RHIZ2_8_B11.b1_A003 Rhizome2 (RHIZ2)... 920 0.0
gb|BE598799.1|BE598799 PI1_82_A10.b1_A002 Pathogen induced ... 894 0.0
gb|BM322388.1|BM322388 PIC1_4_B11.b1_A002 Pathogen-infected... 888 0.0
gb|BE598959.1|BE598959 PI1_84_D06.b1_A002 Pathogen induced ... 884 0.0
gb|CN137830.1|CN137830 OX1_60_A04.b1_A002 Oxidatively-stres... 878 0.0
gb|AW745463.1|AW745463 WS1_35_G06.b1_A002 Water-stressed 1 ... 870 0.0
gb|BE357292.1|BE357292 DG1_148_C02.b1_A002 Dark Grown 1 (DG... 866 0.0
gb|BG649525.1|BG649525 EM1_80_D11.b1_A002 Embryo 1 (EM1) So... 866 0.0
gb|CD220488.1|CD220488 CCC1_67_D01.g1_A007 Callus culture/c... 866 0.0
gb|BI098235.1|BI098235 IP1_29_G05.b1_A002 Immature pannicle... 854 0.0
gb|BG487461.1|BG487461 EM1_65_C11.b1_A002 Embryo 1 (EM1) So... 842 0.0
gb|BF317924.1|BF317924 OV1_9_D12.b1_A002 Ovary 1 (OV1) Sorg... 839 0.0
gb|CN126107.1|CN126107 RHOH1_15_E04.b1_A002 Acid- and alkal... 819 0.0
gb|BI076094.1|BI076094 IP1_25_F06.b1_A002 Immature pannicle... 817 0.0
gb|BE600643.1|BE600643 PI1_89_F08.b1_A002 Pathogen induced ... 811 0.0
gb|BM323951.1|BM323951 PIC1_29_E12.b1_A002 Pathogen-infecte... 767 0.0
gb|BE594445.1|BE594445 PI1_33_E02.b1_A002 Pathogen induced ... 747 0.0
gb|BG487511.1|BG487511 EM1_65_H11.b1_A002 Embryo 1 (EM1) So... 747 0.0
gb|BE365252.1|BE365252 PI1_26_B07.b1_A002 Pathogen induced ... 735 0.0
gb|BF705573.1|BF705573 RHIZ2_4_G12.b1_A003 Rhizome2 (RHIZ2)... 735 0.0
gb|BF705506.1|BF705506 RHIZ2_4_G12.g1_A003 Rhizome2 (RHIZ2)... 733 0.0
gb|BM323494.1|BM323494 PIC1_20_A01.b1_A002 Pathogen-infecte... 731 0.0
gb|BF587329.1|BF587329 FM1_35_B01.b1_A003 Floral-Induced Me... 729 0.0
gb|BE366493.1|BE366493 PI1_33_E02.g1_A002 Pathogen induced ... 722 0.0
gb|BI643719.1|BI643719 IP1_56_B09.b1_A002 Immature pannicle... 706 0.0
gb|BE357361.1|BE357361 DG1_148_C02.g1_A002 Dark Grown 1 (DG... 680 0.0
gb|BG487624.1|BG487624 EM1_65_C11.g1_A002 Embryo 1 (EM1) So... 658 0.0
gb|BG947477.1|BG947477 IP1_4_H05.b1_A002 Immature pannicle ... 644 0.0
gb|CF489487.1|CF489487 POL1_57_H01.g1_A002 Pollen Sorghum b... 644 0.0
gb|BE918253.1|BE918253 OV1_1_A06.g1_A002 Ovary 1 (OV1) Sorg... 642 0.0
gb|BI074663.1|BI074663 IP1_14_E07.b1_A002 Immature pannicle... 642 0.0
gb|BG487675.1|BG487675 EM1_65_H11.g1_A002 Embryo 1 (EM1) So... 640 0.0
gb|BI098307.1|BI098307 IP1_30_G07.b1_A002 Immature pannicle... 638 0.0
gb|BE598474.1|BE598474 PI1_82_A10.g1_A002 Pathogen induced ... 630 e-179
gb|BI211923.1|BI211923 IP1_62_B06.b1_A002 Immature pannicle... 630 e-179
gb|BI074350.1|BI074350 IP1_14_E08.g1_A002 Immature pannicle... 628 e-178
gb|CF481067.1|CF481067 POL1_69_F08.g1_A002 Pollen Sorghum b... 628 e-178
gb|BI074664.1|BI074664 IP1_14_E08.b1_A002 Immature pannicle... 626 e-177
gb|AW563296.1|AW563296 LG1_228_E07.g1_A002 Light Grown 1 (L... 624 e-177
gb|CD229738.1|CD229738 CCC1_18_C12.g1_A007 Callus culture/c... 624 e-177
gb|BG322490.1|BG322490 EM1_28_F03.b1_A002 Embryo 1 (EM1) So... 622 e-176
gb|BI075949.1|BI075949 IP1_23_D03.b1_A002 Immature pannicle... 622 e-176
gb|CF489399.1|CF489399 POL1_57_H01.b1_A002 Pollen Sorghum b... 620 e-176
gb|BG487731.1|BG487731 FM1_73_F01.b1_A003 Floral-Induced Me... 615 e-174
gb|BE362813.1|BE362813 DG1_89_B03.g2_A002 Dark Grown 1 (DG1... 613 e-173
gb|BE918399.1|BE918399 OV1_3_B06.g1_A002 Ovary 1 (OV1) Sorg... 611 e-173
gb|BG947826.1|BG947826 IP1_5_F06.b1_A002 Immature pannicle ... 609 e-172
gb|BF587967.1|BF587967 FM1_35_B01.g1_A003 Floral-Induced Me... 607 e-171
gb|CF482216.1|CF482216 POL1_5_D03.g1_A002 Pollen Sorghum bi... 603 e-170
gb|CF482730.1|CF482730 POL1_8_F10.g1_A002 Pollen Sorghum bi... 603 e-170
gb|BE360170.1|BE360170 DG1_61_E01.g2_A002 Dark Grown 1 (DG1... 593 e-167
gb|BE598613.1|BE598613 PI1_84_D06.g1_A002 Pathogen induced ... 585 e-165
gb|BG411006.1|BG411006 EM1_28_F03.g1_A002 Embryo 1 (EM1) So... 585 e-165
gb|CD229389.1|CD229389 CCC1_15_H05.b1_A007 Callus culture/c... 583 e-164
gb|AW565477.1|AW565477 LG1_344_C07.g1_A002 Light Grown 1 (L... 581 e-164
gb|BE600114.1|BE600114 PI1_79_E04.b1_A002 Pathogen induced ... 579 e-163
gb|BE365391.1|BE365391 PI1_26_B07.g2_A002 Pathogen induced ... 577 e-162
gb|CF482845.1|CF482845 POL1_9_B11.g1_A002 Pollen Sorghum bi... 573 e-161
gb|CD220462.1|CD220462 CCC1_67_D01.b1_A007 Callus culture/c... 557 e-156
gb|BG947478.1|BG947478 IP1_4_H06.b1_A002 Immature pannicle ... 553 e-155
gb|CF484193.1|CF484193 POL1_3_F03.g1_A002 Pollen Sorghum bi... 549 e-154
gb|CD219919.1|CD219919 CCC1_59_A12.g1_A007 Callus culture/c... 541 e-152
gb|CF488513.1|CF488513 POL1_50_B01.g1_A002 Pollen Sorghum b... 533 e-149
gb|AW745577.1|AW745577 WS1_35_G06.g1_A002 Water-stressed 1 ... 531 e-149
gb|BE601242.1|BE601242 PI1_90_F07.g1_A002 Pathogen induced ... 519 e-145
gb|BF588274.1|BF588274 FM1_39_G06.b1_A003 Floral-Induced Me... 509 e-142
gb|CW117261.1|CW117261 104_493_11107565_148_34612_027 Sorgh... 507 e-142
gb|CW295628.1|CW295628 104_777_11461040_148_35627_032 Sorgh... 507 e-142
gb|CW324886.1|CW324886 104_819_11477395_116_35914_070 Sorgh... 507 e-142
gb|CW387827.1|CW387827 fsbb001f072f11f0 Sorghum methylation... 507 e-142
gb|CD228165.1|CD228165 CCC1_6_G04.b1_A007 Callus culture/ce... 500 e-139
gb|BG560131.1|BG560131 RHIZ2_69_G01.b1_A003 Rhizome2 (RHIZ2... 496 e-138
gb|BF317788.1|BF317788 OV1_9_D12.g1_A002 Ovary 1 (OV1) Sorg... 492 e-137
gb|BG053386.1|BG053386 RHIZ2_8_B11.g1_A003 Rhizome2 (RHIZ2)... 482 e-134
gb|BF587714.1|BF587714 FM1_39_G06.g1_A003 Floral-Induced Me... 480 e-133
gb|BE355070.1|BE355070 DG1_113_G11.b1_A002 Dark Grown 1 (DG... 472 e-131
gb|BF421987.1|BF421987 FM1_11_E04.b1_A003 Floral-Induced Me... 464 e-128
gb|CL152939.1|CL152939 104_336_10780359_114_31365_375 Sorgh... 462 e-128
gb|CW087460.1|CW087460 104_432_10947646_114_32553_095 Sorgh... 462 e-128
gb|CW477214.1|CW477214 fsbb001f234h02k0 Sorghum methylation... 462 e-128
gb|BE601159.1|BE601159 PI1_89_F08.g1_A002 Pathogen induced ... 462 e-128
gb|DN552626.1|DN552626 pSHR-RT-A-H2_A12_S021 pSHR Sorghum h... 456 e-126
gb|BF705230.1|BF705230 RHIZ2_2_C07.b1_A003 Rhizome2 (RHIZ2)... 454 e-125
gb|BG051760.1|BG051760 FM1_58_A06.b1_A003 Floral-Induced Me... 446 e-123
gb|BI097925.1|BI097925 IP1_29_G05.g1_A002 Immature pannicle... 446 e-123
gb|BI097998.1|BI097998 IP1_30_G07.g1_A002 Immature pannicle... 446 e-123
gb|AW287483.2|AW287483 LG1_228_E07.b1_A002 Light Grown 1 (L... 444 e-122
gb|BI074349.1|BI074349 IP1_14_E07.g1_A002 Immature pannicle... 444 e-122
gb|BM330382.1|BM330382 PIC1_51_C05.g1_A002 Pathogen-infecte... 444 e-122
gb|BG051561.1|BG051561 FM1_58_A06.g1_A003 Floral-Induced Me... 442 e-122
gb|BE365337.1|BE365337 PI1_26_B07.g1_A002 Pathogen induced ... 434 e-119
gb|BF421792.1|BF421792 FM1_11_E04.g1_A003 Floral-Induced Me... 434 e-119
gb|BI076312.1|BI076312 IP1_25_F06.g1_A002 Immature pannicle... 432 e-119
gb|BF705171.1|BF705171 RHIZ2_2_C07.g1_A003 Rhizome2 (RHIZ2)... 430 e-118
gb|BE360114.1|BE360114 DG1_61_E01.g1_A002 Dark Grown 1 (DG1... 414 e-113
gb|BM328466.1|BM328466 PIC1_29_E12.g1_A002 Pathogen-infecte... 394 e-108
gb|BM327959.1|BM327959 PIC1_19_E08.g1_A002 Pathogen-infecte... 392 e-107
gb|CL152940.1|CL152940 104_336_10780359_116_31366_375 Sorgh... 387 e-105
gb|BG411967.1|BG411967 OV2_40_D02.g1_A002 Ovary 2 (OV2) Sor... 385 e-105
gb|CW268790.1|CW268790 104_739_11401522_116_35309_035 Sorgh... 379 e-103
gb|CW268791.1|CW268791 104_739_11401522_148_35313_035 Sorgh... 379 e-103
gb|BF317684.1|BF317684 OV1_12_A02.g1_A002 Ovary 1 (OV1) Sor... 379 e-103
gb|BG487800.1|BG487800 FM1_73_F01.g1_A003 Floral-Induced Me... 379 e-103
gb|CF072905.1|CF072905 FE1_26_A02.g1_A002 Iron-deficient se... 379 e-103
gb|BI075651.1|BI075651 IP1_23_D03.g1_A002 Immature pannicle... 365 8e-099
gb|CW455535.1|CW455535 fsbb001f200h07f0 Sorghum methylation... 359 5e-097
gb|BG947533.1|BG947533 IP1_5_F06.g1_A002 Immature pannicle ... 357 2e-096
gb|CW324887.1|CW324887 104_819_11477395_148_35910_070 Sorgh... 355 8e-096
gb|BG557589.1|BG557589 EM1_53_F01.g1_A002 Embryo 1 (EM1) So... 351 1e-094
gb|BF421035.1|BF421035 FM1_5_E01.b1_A003 Floral-Induced Mer... 349 5e-094
gb|BG947390.1|BG947390 IP1_4_H05.g1_A002 Immature pannicle ... 347 2e-093
gb|BG947391.1|BG947391 IP1_4_H06.g1_A002 Immature pannicle ... 347 2e-093
gb|BI141245.1|BI141245 IP1_53_B05.g1_A002 Immature pannicle... 345 8e-093
gb|AW563544.1|AW563544 LG1_239_H08.g1_A002 Light Grown 1 (L... 335 7e-090
gb|AW285021.1|AW285021 LG1_297_D01.g1_A002 Light Grown 1 (L... 331 1e-088
gb|BM327996.1|BM327996 PIC1_20_A01.g1_A002 Pathogen-infecte... 329 5e-088
gb|BI141450.1|BI141450 IP1_56_B09.g1_A002 Immature pannicle... 313 3e-083
gb|BI211850.1|BI211850 IP1_62_B06.g1_A002 Immature pannicle... 313 3e-083
gb|BM318184.1|BM318184 PI1_79_E04.g9_A002 Pathogen induced ... 313 3e-083
gb|CW487692.1|CW487692 fsbb001f253k21k0 Sorghum methylation... 295 6e-078
gb|BG558497.1|BG558497 RHIZ2_56_E02.g1_A003 Rhizome2 (RHIZ2... 276 6e-072
gb|BF420855.1|BF420855 OV1_12_A02.b1_A002 Ovary 1 (OV1) Sor... 274 2e-071
gb|BF704814.1|BF704814 FM1_51_H02.b1_A003 Floral-Induced Me... 272 9e-071
gb|CW389198.1|CW389198 fsbb001f074e16f0 Sorghum methylation... 270 4e-070
gb|BI141513.1|BI141513 IP1_53_B05.b1_A002 Immature pannicle... 270 4e-070
gb|BQ656244.1|BQ656244 pSHR0177.3 Sorghum halepense rhizome... 250 3e-064
gb|CW368922.1|CW368922 fsbb001f043b15k0 Sorghum methylation... 240 3e-061
gb|CW087461.1|CW087461 104_432_10947646_116_32557_095 Sorgh... 236 5e-060
gb|CN126190.1|CN126190 RHOH1_15_E04.g1_A002 Acid- and alkal... 236 5e-060
gb|BE360053.1|BE360053 DG1_61_E01.b1_A002 Dark Grown 1 (DG1... 232 8e-059
gb|CW482573.1|CW482573 fsbb001f242l19k0 Sorghum methylation... 228 1e-057
gb|CF482650.1|CF482650 POL1_8_F10.b1_A002 Pollen Sorghum bi... 196 4e-048
gb|BG054120.1|BG054120 OV2_3_G03.g1_A002 Ovary 2 (OV2) Sorg... 194 2e-047
gb|BQ789585.1|BQ789585 pSHR172.4 Sorghum halepense rhizome ... 190 3e-046
gb|BI140004.1|BI140004 IP1_48_F08.b1_A002 Immature pannicle... 184 2e-044
gb|BF704729.1|BF704729 FM1_50_G09.b1_A003 Floral-Induced Me... 174 2e-041
gb|BZ368249.1|BZ368249 id12c02.g1 WGS-SbicolorF (JM107 adap... 167 4e-039
gb|CW073208.1|CW073208 104_333_10778900_114_31359_068 Sorgh... 167 4e-039
gb|BE355265.1|BE355265 DG1_113_G11.g1_A002 Dark Grown 1 (DG... 159 9e-037
gb|BF317714.1|BF317714 OV1_12_E01.g1_A002 Ovary 1 (OV1) Sor... 153 6e-035
gb|BE355656.1|BE355656 DG1_115_A02.g1_A002 Dark Grown 1 (DG... 139 9e-031
gb|BG412308.1|BG412308 OV2_40_D02.b1_A002 Ovary 2 (OV2) Sor... 117 3e-024
gb|CW073209.1|CW073209 104_333_10778900_116_31360_068 Sorgh... 115 1e-023
gb|CW188763.1|CW188763 104_608_11173218_148_36731_067 Sorgh... 115 1e-023
gb|BF420962.1|BF420962 FM1_5_E01.g1_A003 Floral-Induced Mer... 115 1e-023
gb|BZ368248.1|BZ368248 id12c02.b1 WGS-SbicolorF (JM107 adap... 107 3e-021
gb|CF483897.1|CF483897 POL1_1_H11.b1_A002 Pollen Sorghum bi... 107 3e-021
gb|BG054383.1|BG054383 OV2_3_G03.b1_A002 Ovary 2 (OV2) Sorg... 94 5e-017
gb|CW041762.1|CW041762 104_275_10506732_115_30285 Sorghum m... 82 2e-013
gb|CW455486.1|CW455486 fsbb001f200g03k0 Sorghum methylation... 82 2e-013
gb|CW482572.1|CW482572 fsbb001f242l19f0 Sorghum methylation... 82 2e-013
gb|CF482768.1|CF482768 POL1_9_B11.b1_A002 Pollen Sorghum bi... 82 2e-013
gb|BZ696549.1|BZ696549 SP__Ba0082E03.r SP__Ba Sorghum propi... 60 7e-007
gb|AW563706.1|AW563706 LG1_248_E12.g1_A002 Light Grown 1 (L... 56 1e-005
gb|CF483861.1|CF483861 POL1_1_E01.b1_A002 Pollen Sorghum bi... 56 1e-005
gb|CW455485.1|CW455485 fsbb001f200g03f0 Sorghum methylation... 48 0.002
gb|BG240045.1|BG240045 OV1_17_C02.b1_A002 Ovary 1 (OV1) Sor... 46 0.010
gb|CF430512.1|CF430512 PH1_28_E01.g1_A002 Phosphorous-defic... 46 0.010
gb|CF486921.1|CF486921 POL1_40_D10.g1_A002 Pollen Sorghum b... 46 0.010
gb|CF488606.1|CF488606 POL1_51_B11.b1_A002 Pollen Sorghum b... 46 0.010
gb|CF488677.1|CF488677 POL1_51_B11.g1_A002 Pollen Sorghum b... 46 0.010
gb|CF489600.1|CF489600 POL1_58_C03.g1_A002 Pollen Sorghum b... 46 0.010
gb|CN126085.1|CN126085 RHOH1_15_C05.b1_A002 Acid- and alkal... 46 0.010
gb|CN128638.1|CN128638 RHOH1_30_E12.g1_A002 Acid- and alkal... 46 0.010
gb|CN129002.1|CN129002 RHOH1_32_H12.g1_A002 Acid- and alkal... 46 0.010
gb|CN129901.1|CN129901 RHOH1_38_D04.b1_A002 Acid- and alkal... 46 0.010
gb|CN129987.1|CN129987 RHOH1_38_D04.g1_A002 Acid- and alkal... 46 0.010
gb|CN134425.1|CN134425 OX1_26_F11.b1_A002 Oxidatively-stres... 46 0.010
gb|CN137927.1|CN137927 OX1_60_D07.g1_A002 Oxidatively-stres... 46 0.010
gb|CN150992.1|CN150992 WOUND1_72_F07.g1_A002 Wounded leaves... 46 0.010
gb|CX609400.1|CX609400 ANR1_12_A11.g1_A002 Anaerobic roots ... 46 0.010
gb|CX611710.1|CX611710 ANR1_26_F06.b1_A002 Anaerobic roots ... 46 0.010
gb|CX611794.1|CX611794 ANR1_26_F06.g1_A002 Anaerobic roots ... 46 0.010
gb|CX613133.1|CX613133 GABR1_6_A07.g1_A002 GA- or brassinol... 46 0.010
gb|CX616328.1|CX616328 GABR1_27_F11.b1_A002 GA- or brassino... 46 0.010
gb|CX616418.1|CX616418 GABR1_27_F11.g1_A002 GA- or brassino... 46 0.010
gb|CX622950.1|CX622950 GABR1_66_H06.g1_A002 GA- or brassino... 46 0.010
gb|AI723796.1|AI723796 RHIZ1_12_B04.y1_A001 Rhizome1 (RHIZ1... 42 0.15
gb|CX613050.1|CX613050 GABR1_6_A07.b1_A002 GA- or brassinol... 42 0.15
>gb|CN137898.1|CN137898 OX1_60_A04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_60_A04_A002 5', mRNA sequence
Length = 825
Score = 1374 bits (693), Expect = 0.0
Identities = 792/825 (96%)
Strand = Plus / Plus
Query: 109 ggcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaa 168
||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 1 ggcaatggcgggcacggtgacggtcccgggggcgtcggtcccctcgacgccgctgctcaa 60
Query: 169 ggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcg 228
||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 61 ggacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggag 120
Query: 229 gcccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccat 288
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 gcccttcttccagccctaccacctcatcatcgtgcaggacggcgaccccaccaagaccat 180
Query: 289 caaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcct 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcct 240
Query: 349 cgggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacat 408
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 241 cggccccaaggcctcctgcatctccttcaaggactcggcgtgccgctgcttcggctacat 300
Query: 409 ggtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccc 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggaccc 360
Query: 469 atctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccac 528
| ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct: 361 aactggcaaggatatcaatgctcttgagcagcacatcaagaacatcatgagcccatccac 420
Query: 529 cccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtgg 588
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 421 cccgttcttcttcaacaccctgtatgacccctaccgcgagggtgctgactttgtgcgtgg 480
Query: 589 ataccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaa 648
||||||||||||||||||||||||| | ||||| || |||||||| ||||||||||||||
Sbjct: 481 ataccccttcagcctcagggagggtacccacactgctgtctcccatggcctgtggctgaa 540
Query: 649 catccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggta 708
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 541 catccctgactatgatgctcccacacagctggtcaagcctaaggagaggaacgagaggta 600
Query: 709 tgttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacct 768
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 601 tgttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgcggcatgaacct 660
Query: 769 tgccttcgacagggatctcattggccctgctatgtactttggtctcatgggtgatggcca 828
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctgcttcgacagggatctcattggccctgctatgtactttggtctcatgggtgatggcca 720
Query: 829 gcccatcggtcgctacgacgacatgtgggcaggatggtgtgtgaaggtcatctgcgacca 888
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 721 gcccattggtcgctacgacgacatgtgggcaggatggtgtgtcaaggtcatctgcgacca 780
Query: 889 cctgagcctgggagtcaagactggcctgccatacatctggcacag 933
| ||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 781 cttgagcctgggagtcaagaccggtctgccatacatctggcacag 825
>gb|BE918200.1|BE918200 OV1_3_B06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 604
Score = 1007 bits (508), Expect = 0.0
Identities = 574/596 (96%)
Strand = Plus / Plus
Query: 292 ggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctcgg 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctcgg 68
Query: 352 gcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatggt 411
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 69 ccccaaggcctcctgcatctccttcaaggactcggcgtgccgctgcttcggctacatggt 128
Query: 412 ctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggacccatc 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 129 ctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggacccaac 188
Query: 472 tggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacccc 531
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 189 tggcaaggatatcaatgctcttgagcagcacatcaagaacatcatgagcccatccacccc 248
Query: 532 gttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtggata 591
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 249 gttcttcttcaacaccctgtatgacccctaccgcgagggtgctgactttgtgcgtggata 308
Query: 592 ccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaacat 651
|||||||||||||||||||||| | ||||| || |||||||| |||||||||||||||||
Sbjct: 309 ccccttcagcctcagggagggtacccacactgctgtctcccatggcctgtggctgaacat 368
Query: 652 ccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtatgt 711
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 369 ccctgactatgatgctcccacacagctggtcaagcctaaggagaggaacgagaggtatgt 428
Query: 712 tgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaaccttgc 771
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 429 tgatgctgtcatgacaatccccaagggaaccttgttccccatgtgcggcatgaacctctg 488
Query: 772 cttcgacagggatctcattggccctgctatgtactttggtctcatgggtgatggccagcc 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cttcgacagggatctcattggccctgctatgtactttggtctcatgggtgatggccagcc 548
Query: 832 catcggtcgctacgacgacatgtgggcaggatggtgtgtgaaggtcatctgcgacc 887
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 549 cattggtcgctacgacgacatgtgggcaggatggtgtgtcaaggtcatctgcgacc 604
>gb|BE918029.1|BE918029 OV1_1_A06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 599
Score = 997 bits (503), Expect = 0.0
Identities = 569/591 (96%)
Strand = Plus / Plus
Query: 292 ggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctcgg 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctcgg 68
Query: 352 gcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatggt 411
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 69 ccccaaggcctcctgcatctccttcaaggactcggcgtgccgctgcttcggctacatggt 128
Query: 412 ctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggacccatc 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 129 ctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggacccaac 188
Query: 472 tggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccacccc 531
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 189 tggcaaggatatcaatgctcttgagcagcacatcaagaacatcatgagcccatccacccc 248
Query: 532 gttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtggata 591
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 249 gttcttcttcaacaccctgtatgacccctaccgcgagggtgctgactttgtgcgtggata 308
Query: 592 ccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaacat 651
|||||||||||||||||||||| | ||||| || |||||||| |||||||||||||||||
Sbjct: 309 ccccttcagcctcagggagggtacccacactgctgtctcccatggcctgtggctgaacat 368
Query: 652 ccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtatgt 711
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 369 ccctgactatgatgctcccacacagctggtcaagcctaaggagaggaacgagaggtatgt 428
Query: 712 tgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaaccttgc 771
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 429 tgatgctgtcatgacaatccccaagggaaccttgttccccatgtgcggcatgaacctctg 488
Query: 772 cttcgacagggatctcattggccctgctatgtactttggtctcatgggtgatggccagcc 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cttcgacagggatctcattggccctgctatgtactttggtctcatgggtgatggccagcc 548
Query: 832 catcggtcgctacgacgacatgtgggcaggatggtgtgtgaaggtcatctg 882
||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 549 cattggtcgctacgacgacatgtgggcaggatggtgtgtcaaggtcatctg 599
>gb|BG053661.1|BG053661 RHIZ2_8_B11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 550
Score = 920 bits (464), Expect = 0.0
Identities = 521/540 (96%)
Strand = Plus / Plus
Query: 105 ctgcggcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgc 164
||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||
Sbjct: 11 ctgcggcaatggcgggcacggtgacggtcccgggggcgtcggtcccctcgacgccgctgc 70
Query: 165 tcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgt 224
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 71 tcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgt 130
Query: 225 ggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaaga 284
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 131 ggaggcccttcttccagccctaccacctcatcatcgtgcaggacggcgaccccaccaaga 190
Query: 285 ccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgca 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgca 250
Query: 345 tcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggct 404
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 251 tcctcggccccaaggcctcctgcatctccttcaaggactccgcgtgccgctgcttcggct 310
Query: 405 acatggtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaagg 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acatggtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaagg 370
Query: 465 acccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccat 524
||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||||
Sbjct: 371 acccaactggcaaggatatcaatgctcttgagcagcacatcaagaacatcatgagcccat 430
Query: 525 ccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgc 584
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 431 ccaccccgttcttcttcaacaccctgtacgacccctaccgcgagggtgctgactttgtgc 490
Query: 585 gtggataccccttcagcctcagggagggtgctcacaccgccgtctcccacggcctgtggc 644
||||||||||||||||||||||||||||| | ||||| || |||||||| ||||||||||
Sbjct: 491 gtggataccccttcagcctcagggagggtacccacactgctgtctcccatggcctgtggc 550
>gb|BE598799.1|BE598799 PI1_82_A10.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 615
Score = 894 bits (451), Expect = 0.0
Identities = 556/589 (94%), Gaps = 4/589 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 15 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 73
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 74 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 133
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 134 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 193
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 194 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 253
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 313
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 314 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 373
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 433
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 434 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 493
Query: 505 caagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccg 564
||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 494 caagaacatcatgagcccatccaccccgttcttcttcaacaccctgtatgacccctaccg 553
Query: 565 tgagggtgctgactttgtgcgtggataccccttcagcctcagggagggt 613
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 cgagggtgctgactttgtgcgtggataccccttcagcctcagggagggt 602
>gb|BM322388.1|BM322388 PIC1_4_B11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 545
Score = 888 bits (448), Expect = 0.0
Identities = 514/536 (95%)
Strand = Plus / Plus
Query: 363 cctgcatctccttcaaggactccgcctgccgctgcttcggctacatggtctccaagaaga 422
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 9 cctgcatctccttcaaggactcggcgtgccgctgcttcggctacatggtctccaagaaga 68
Query: 423 agtacatctacaccatcgacgacgactgcttcgttgccaaggacccatctggcaaggata 482
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 69 agtacatctacaccatcgacgacgactgcttcgttgccaaggacccaactggcaaggata 128
Query: 483 tcaatgctcttgagcagcacatcaagaacctcctcagcccatccaccccgttcttcttca 542
||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 129 tcaatgctcttgagcagcacatcaagaacatcatgagcccatccaccccgttcttcttca 188
Query: 543 acaccctgtacgacccctaccgtgagggtgctgactttgtgcgtggataccccttcagcc 602
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 189 acaccctgtatgacccctaccgcgagggtgctgactttgtgcgtggataccccttcagcc 248
Query: 603 tcagggagggtgctcacaccgccgtctcccacggcctgtggctgaacatccctgactatg 662
||||||||||| | ||||| || |||||||| ||||||||||||||||||||||||||||
Sbjct: 249 tcagggagggtacccacactgctgtctcccatggcctgtggctgaacatccctgactatg 308
Query: 663 atgctcccacacagctggtcaagcccaaggagaggaatgagaggtatgttgatgctgtca 722
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 309 atgctcccacacagctggtcaagcctaaggagaggaacgagaggtatgttgatgctgtca 368
Query: 723 tgacaatccccaagggaaccttgttccccatgtgtggcatgaaccttgccttcgacaggg 782
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 369 tgacaatccccaagggaaccttgttccccatgtgcggcatgaacctctgcttcgacaggg 428
Query: 783 atctcattggccctgctatgtactttggtctcatgggtgatggccagcccatcggtcgct 842
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 429 atctcattggccctgctatgtactttggtctcatgggtgatggccagcccattggtcgct 488
Query: 843 acgacgacatgtgggcaggatggtgtgtgaaggtcatctgcgaccacctgagcctg 898
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 489 acgacgacatgtgggcaggatggtgtgtcaaggtcatctgcgaccacttgagcctg 544
>gb|BE598959.1|BE598959 PI1_84_D06.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 581
Score = 884 bits (446), Expect = 0.0
Identities = 512/534 (95%)
Strand = Plus / Plus
Query: 105 ctgcggcaatggcgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgc 164
||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||
Sbjct: 48 ctgcggcaatggcgggcacggtgacggtcccgggggcgtcggtcccctcgacgccgctgc 107
Query: 165 tcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgt 224
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 108 tcaaggacgagctggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgt 167
Query: 225 ggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaaga 284
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 168 ggaggcccttcttccagccctaccacctcatcatcgtgcaggacggcgaccccaccaaga 227
Query: 285 ccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgca 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgca 287
Query: 345 tcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgctgcttcggct 404
||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 288 tcctcggccccaaggcctcctgcatctccttcaaggactcggcgtgccgctgcttcggct 347
Query: 405 acatggtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaagg 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 acatggtctccaagaagaagtacatctacaccatcgacgacgactgcttcgttgccaagg 407
Query: 465 acccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctcctcagcccat 524
||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||||
Sbjct: 408 acccaactggcaaggatatcaatgctcttgagcagcacatcaagaacatcatgagcccat 467
Query: 525 ccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgc 584
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 468 ccaccccgttcttcttcaacaccctgtatgacccctaccgcgagggtgctgactttgtgc 527
Query: 585 gtggataccccttcagcctcagggagggtgctcacaccgccgtctcccacggcc 638
||||||||||||||||||||||||||||| | ||||| || |||||||| ||||
Sbjct: 528 gtggataccccttcagcctcagggagggtacccacactgctgtctcccatggcc 581
>gb|CN137830.1|CN137830 OX1_60_A04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_60_A04_A002 3', mRNA sequence
Length = 809
Score = 878 bits (443), Expect = 0.0
Identities = 533/563 (94%)
Strand = Plus / Plus
Query: 648 acatccctgactatgatgctcccacacagctggtcaagcccaaggagaggaatgagaggt 707
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 1 acatccctgactatgatgctcccacacagctggtcaagcctaaggagaggaacgagaggt 60
Query: 708 atgttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgtggcatgaacc 767
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 atgttgatgctgtcatgacaatccccaagggaaccttgttccccatgtgcggcatgaacc 120
Query: 768 ttgccttcgacagggatctcattggccctgctatgtactttggtctcatgggtgatggcc 827
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 tctgcttcgacagggatctcattggccctgctatgtactttggtctcatgggtgatgccc 180
Query: 828 agcccatcggtcgctacgacgacatgtgggcaggatggtgtgtgaaggtcatctgcgacc 887
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 agcccattggtcgctacgacgacatgtgggcaggatggtgtgtcaaggtcatctgcgacc 240
Query: 888 acctgagcctgggagtcaagactggcctgccatacatctggcacagcaaggctagcaacc 947
|| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 241 acttgagcctgggagtcaagaccggtctgccatacatctggcacagcaaggctagcaacc 300
Query: 948 ccttcgttaacttgaagaaggaatacaagggcatcttctggcaggaggacatcatcccct 1007
|||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctttgtcaacttgaggaaggaatacaagggcatcttctggcaggaggacatcatcccct 360
Query: 1008 tcttccagaacgtgaccatccccaaggactgcgacaccgtccaaaagtgctacatctacc 1067
|||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 361 tcttccagaacgtgaccatccccaaggattgcgacactgtccagaagtgctacatctacc 420
Query: 1068 tctctggacaagtgaaggagaagctgggcacgattgacccctactttgtcaagctcggtg 1127
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 tctctggacaggtgaaggagaagctgggcacgattgacccctactttgtcaagctcgccg 480
Query: 1128 acgccatggtcacctggatcgaggcctgggatgagctgaacccgtcgacccctgccgccg 1187
|| |||||||||||||||| ||||||||||||||||||||||| | |||||| || |||
Sbjct: 481 actccatggtcacctggattgaggcctgggatgagctgaacccagctacccctcccaccg 540
Query: 1188 caaatggcaaggccaagtagatg 1210
|||||||||||||||||||||
Sbjct: 541 agaatggcaaggccaagtagatg 563
Score = 341 bits (172), Expect = 1e-091
Identities = 204/212 (96%), Gaps = 2/212 (0%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 600 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 658
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 659 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 718
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattcagacaataat 1415
|||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||
Sbjct: 719 cttttgtagttgatgaaagggattcgtcgtcactatcatttacataattcagacaataa- 777
Query: 1416 tttatattgtgtaattctgagaatcaaagcac 1447
|||||||||||||||| |||||||||||||||
Sbjct: 778 tttatattgtgtaattttgagaatcaaagcac 809
>gb|AW745463.1|AW745463 WS1_35_G06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 546
Score = 870 bits (439), Expect = 0.0
Identities = 514/539 (95%)
Strand = Plus / Plus
Query: 600 gcctcagggagggtgctcacaccgccgtctcccacggcctgtggctgaacatccctgact 659
|||||||||||||| | ||||| || |||||||| |||||||||||||||||||||||||
Sbjct: 8 gcctcagggagggtacccacactgctgtctcccatggcctgtggctgaacatccctgact 67
Query: 660 atgatgctcccacacagctggtcaagcccaaggagaggaatgagaggtatgttgatgctg 719
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 68 atgatgctcccacacagctggtcaagcctaaggagaggaacgagaggtatgttgatgctg 127
Query: 720 tcatgacaatccccaagggaaccttgttccccatgtgtggcatgaaccttgccttcgaca 779
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 128 tcatgacaatccccaagggaaccttgttccccatgtgcggcatgaacctctgcttcgaca 187
Query: 780 gggatctcattggccctgctatgtactttggtctcatgggtgatggccagcccatcggtc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 188 gggatctcattggccctgctatgtactttggtctcatgggtgatggccagcccattggtc 247
Query: 840 gctacgacgacatgtgggcaggatggtgtgtgaaggtcatctgcgaccacctgagcctgg 899
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 248 gctacgacgacatgtgggcaggatggtgtgtcaaggtcatctgcgaccacttgagcctgg 307
Query: 900 gagtcaagactggcctgccatacatctggcacagcaaggctagcaaccccttcgttaact 959
|||||||||| || |||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 308 gagtcaagaccggtctgccatacatctggcacagcaaggctagcaacccctttgtcaact 367
Query: 960 tgaagaaggaatacaagggcatcttctggcaggaggacatcatccccttcttccagaacg 1019
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgaggaaggaatacaagggcatcttctggcaggaggacatcatccccttcttccagaacg 427
Query: 1020 tgaccatccccaaggactgcgacaccgtccaaaagtgctacatctacctctctggacaag 1079
|||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |
Sbjct: 428 tgaccatccccaaggattgcgacactgtccagaagtgctacatctacctctctggacagg 487
Query: 1080 tgaaggagaagctgggcacgattgacccctactttgtcaagctcggtgacgccatggtc 1138
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 488 tgaaggagaagctgggcacgattgacccctactttgtcaagctcgccgacgccatggtc 546
>gb|BE357292.1|BE357292 DG1_148_C02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 618
Score = 866 bits (437), Expect = 0.0
Identities = 542/575 (94%), Gaps = 4/575 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 45 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 103
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 104 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 163
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 164 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 223
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 224 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 283
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 343
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 344 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 403
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 463
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 464 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 523
Query: 505 caagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccg 564
||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 524 caagaacatcatgagcccatccaccccgttcttcttcaacaccctgtatgacccctaccg 583
Query: 565 tgagggtgctgactttgtgcgtggataccccttca 599
||||||||||||||||||||||||||||||||||
Sbjct: 584 cgagggtgctgactttgtgcgtggataccccttca 618
>gb|BG649525.1|BG649525 EM1_80_D11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 627
Score = 866 bits (437), Expect = 0.0
Identities = 542/575 (94%), Gaps = 4/575 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 54 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 112
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 113 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 172
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 173 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 232
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 233 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 292
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 352
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 353 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 412
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 472
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 473 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 532
Query: 505 caagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccg 564
||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 533 caagaacatcatgagcccatccaccccgttcttcttcaacaccctgtatgacccctaccg 592
Query: 565 tgagggtgctgactttgtgcgtggataccccttca 599
||||||||||||||||||||||||||||||||||
Sbjct: 593 cgagggtgctgactttgtgcgtggataccccttca 627
>gb|CD220488.1|CD220488 CCC1_67_D01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_D01_A007 5', mRNA sequence
Length = 630
Score = 866 bits (437), Expect = 0.0
Identities = 545/579 (94%), Gaps = 4/579 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 53 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 111
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 112 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggccccgggggcgtc 171
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 172 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 231
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 232 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 291
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 351
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 352 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 411
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 471
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 472 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 531
Query: 505 caagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccg 564
||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 532 caagaacatcatgagcccatccaccccgttcttcttcaacaccctgtatgacccctaccg 591
Query: 565 tgagggtgctgactttgtgcgtggataccccttcagcct 603
||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cgagggtgctgactttgtgcgtggataccccttcagcct 630
>gb|BI098235.1|BI098235 IP1_29_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 617
Score = 854 bits (431), Expect = 0.0
Identities = 536/569 (94%), Gaps = 4/569 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 50 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 108
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 109 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 168
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 228
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 288
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 348
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 408
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 468
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 469 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 528
Query: 505 caagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccg 564
||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 529 caagaacatcatgagcccatccaccccgttcttcttcaacaccctgtatgacccctaccg 588
Query: 565 tgagggtgctgactttgtgcgtggatacc 593
||||||||||||||||||||||||||||
Sbjct: 589 cgagggtgctgactttgtgcgtggatacc 617
>gb|BG487461.1|BG487461 EM1_65_C11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 842 bits (425), Expect = 0.0
Identities = 513/541 (94%), Gaps = 1/541 (0%)
Strand = Plus / Plus
Query: 57 gagagatcgagatccggaggccgcgagtgggagcgccaccaccagcgtctgcggcaatgg 116
|||||||||||||||||||| |||||| | | ||||||||| ||||||||||||
Sbjct: 9 gagagatcgagatccggagg-cgcgagcaccaccaccaccaccacgacctgcggcaatgg 67
Query: 117 cgggcacggtgacggtcccggggtcgtcgaccccctccacgccgctgctcaaggacgagc 176
||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||
Sbjct: 68 cgggcacggtgacggtcccgggggcgtcggtcccctcgacgccgctgctcaaggacgagc 127
Query: 177 tcgacatcgtgatcccgacgatccgcaacctcgacttcctggagatgtggcggcccttct 236
| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 128 tggacatcgtgatcccgacgatccgcaacctcgacttcctcgagatgtggaggcccttct 187
Query: 237 tccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatcaaggtgc 296
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 188 tccagccctaccacctcatcatcgtgcaggacggcgaccccaccaagaccatcaaggtgc 247
Query: 297 ccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctcgggccca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 248 ccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctcggcccca 307
Query: 357 aggcctcctgcatctccttcaaggactccgcctgccgctgcttcggctacatggtctcca 416
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 308 aggcctcctgcatctccttcaaggactcggcgtgccgctgcttcggctacatggtctcca 367
Query: 417 agaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggacccatctggca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 368 agaagaagtacatctacaccatcgacgacgactgcttcgttgccaaggacccaactggca 427
Query: 477 aggatatcaatgctcttgagcagcacatcaagaacctcctcagcccatccaccccgttct 536
||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 428 aggatatcaatgctcttgagcagcacatcaagaacatcatgagcccatccaccccgttct 487
Query: 537 tcttcaacaccctgtacgacccctaccgtgagggtgctgactttgtgcgtggatacccct 596
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 488 tcttcaacaccctgtatgacccctaccgcgagggtgctgactttgtgcgtggatacccct 547
Query: 597 t 597
|
Sbjct: 548 t 548
>gb|BF317924.1|BF317924 OV1_9_D12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 532
Score = 839 bits (423), Expect = 0.0
Identities = 495/519 (95%)
Strand = Plus / Plus
Query: 665 gctcccacacagctggtcaagcccaaggagaggaatgagaggtatgttgatgctgtcatg 724
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 8 gctcccacacagctggtcaagcctaaggagaggaacgagaggtatgttgatgctgtcatg 67
Query: 725 acaatccccaagggaaccttgttccccatgtgtggcatgaaccttgccttcgacagggat 784
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 68 acaatccccaagggaaccttgttccccatgtgcggcatgaacctctgcttcgacagggat 127
Query: 785 ctcattggccctgctatgtactttggtctcatgggtgatggccagcccatcggtcgctac 844
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 128 ctcattggccctgctatgtactttggtctcatgggtgatggccagcccattggtcgctac 187
Query: 845 gacgacatgtgggcaggatggtgtgtgaaggtcatctgcgaccacctgagcctgggagtc 904
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 188 gacgacatgtgggcaggatggtgtgtcaaggtcatctgcgaccacttgagcctgggagtc 247
Query: 905 aagactggcctgccatacatctggcacagcaaggctagcaaccccttcgttaacttgaag 964
||||| || |||||||||||||||||||||||||||||||||||||| || ||||||| |
Sbjct: 248 aagaccggtctgccatacatctggcacagcaaggctagcaacccctttgtcaacttgagg 307
Query: 965 aaggaatacaagggcatcttctggcaggaggacatcatccccttcttccagaacgtgacc 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aaggaatacaagggcatcttctggcaggaggacatcatccccttcttccagaacgtgacc 367
Query: 1025 atccccaaggactgcgacaccgtccaaaagtgctacatctacctctctggacaagtgaag 1084
||||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 368 atccccaaggattgcgacactgtccagaagtgctacatctacctctctggacaggtgaag 427
Query: 1085 gagaagctgggcacgattgacccctactttgtcaagctcggtgacgccatggtcacctgg 1144
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 428 gagaagctgggcacgattgacccctactttgtcaagctcgccgacgccatggtcacctgg 487
Query: 1145 atcgaggcctgggatgagctgaacccgtcgacccctgcc 1183
|| ||||||||||||||||||||||| | |||||||||
Sbjct: 488 attgaggcctgggatgagctgaacccagctacccctgcc 526
>gb|CN126107.1|CN126107 RHOH1_15_E04.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_15_E04_A002 3', mRNA sequence
Length = 754
Score = 819 bits (413), Expect = 0.0
Identities = 494/521 (94%)
Strand = Plus / Plus
Query: 690 aggagaggaatgagaggtatgttgatgctgtcatgacaatccccaagggaaccttgttcc 749
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagaggaacgagaggtatgttgatgctgtcatgacaatccccaagggaaccttgttcc 60
Query: 750 ccatgtgtggcatgaaccttgccttcgacagggatctcattggccctgctatgtactttg 809
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccatgtgcggcatgaacctctgcttcgacagggatctcattggccctgctatgtactttg 120
Query: 810 gtctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggcaggatggtgtg 869
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 121 gtctcatgggtgatggccagcccattggtcgctacgacgacatgtgggcaggatggtgtg 180
Query: 870 tgaaggtcatctgcgaccacctgagcctgggagtcaagactggcctgccatacatctggc 929
| |||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 181 tcaaggtcatctgcgaccacttgagcctgggagtcaagaccggtctgccatacatctggc 240
Query: 930 acagcaaggctagcaaccccttcgttaacttgaagaaggaatacaagggcatcttctggc 989
|||||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||
Sbjct: 241 acagcaaggctagcaacccctttgtcaacttgaggaaggagtacaagggcatcttctggc 300
Query: 990 aggaggacatcatccccttcttccagaacgtgaccatccccaaggactgcgacaccgtcc 1049
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 301 aggaggacatcatccccttcttccagaacgtgaccatccccaaggattgcgacactgtcc 360
Query: 1050 aaaagtgctacatctacctctctggacaagtgaaggagaagctgggcacgattgacccct 1109
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 agaagtgctacatctacctctctggacaggtgaaggagaagctgggcacgattgacccct 420
Query: 1110 actttgtcaagctcggtgacgccatggtcacctggatcgaggcctgggatgagctgaacc 1169
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 421 actttgtcaagctcgccgacgccatggtcacctggattgaggcctgggatgagctgaacc 480
Query: 1170 cgtcgacccctgccgccgcaaatggcaaggccaagtagatg 1210
| | ||||||||| ||| |||||||||||||||||||||
Sbjct: 481 cagctacccctgccaccgagaatggcaaggccaagtagatg 521
Score = 305 bits (154), Expect = 7e-081
Identities = 176/182 (96%), Gaps = 1/182 (0%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 558 aaaagagagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 616
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 617 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 676
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattcagacaataat 1415
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 677 cttttgtagttgatgaaagggatttgtcgtcactatcatttacataattcagacaataat 736
Query: 1416 tt 1417
||
Sbjct: 737 tt 738
>gb|BI076094.1|BI076094 IP1_25_F06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 612
Score = 817 bits (412), Expect = 0.0
Identities = 531/566 (93%), Gaps = 6/566 (1%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 50 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 108
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 109 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 168
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 228
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 288
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 348
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 408
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 468
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 469 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 528
Query: 505 caagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccg 564
||||||| || | |||||||||||||||||||||||| |||||||||| || ||||||||
Sbjct: 529 caagaacatcatgagcccatccaccccgttcttcttc-acaccctgtatga-ccctaccg 586
Query: 565 tgagggtgctgactttgtgcgtggat 590
|||||||||||||||||||||||||
Sbjct: 587 cgagggtgctgactttgtgcgtggat 612
>gb|BE600643.1|BE600643 PI1_89_F08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 584
Score = 811 bits (409), Expect = 0.0
Identities = 514/547 (93%), Gaps = 4/547 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 39 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 97
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 98 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 157
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 158 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 217
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 218 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 277
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 337
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 397
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 457
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 458 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 517
Query: 505 caagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccg 564
||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 518 caagaacatcatgagcccatccaccccgttcttcttcaacaccctgtatgacccctaccg 577
Query: 565 tgagggt 571
||||||
Sbjct: 578 cgagggt 584
>gb|BM323951.1|BM323951 PIC1_29_E12.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 530
Score = 767 bits (387), Expect = 0.0
Identities = 490/523 (93%), Gaps = 1/523 (0%)
Strand = Plus / Plus
Query: 376 caaggactccgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacac 435
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 caaggactcggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacac 68
Query: 436 catcgacgacgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttga 495
|||||||||||||||||||||||||||||| || ||||||||||||||||| | |||
Sbjct: 69 catcgacgacgactgcttcgttgccaaggaggcaactggcaaggatatcaataagcgtga 128
Query: 496 gcagcacatcaagaacctcctcagcccatccaccccgttcttcttcaacaccctgtacga 555
|||||||||||||||| || | ||||||||||||||||||||| | |||||||| ||
Sbjct: 129 gcagcacatcaagaacatcatgagcccatccaccccgttcttcgagag-accctgtatga 187
Query: 556 cccctaccgtgagggtgctgactttgtgcgtggataccccttcagcctcagggagggtgc 615
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 188 cccctaccgcgagggtgctgactttgtgcgtggataccccttcagcctcagggagggtac 247
Query: 616 tcacaccgccgtctcccacggcctgtggctgaacatccctgactatgatgctcccacaca 675
||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ccacactgctgtctcccatggcctgtggctgaacatccctgactatgatgctcccacaca 307
Query: 676 gctggtcaagcccaaggagaggaatgagaggtatgttgatgctgtcatgacaatccccaa 735
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 308 gctggtcaagcctaaggagaggaacgagaggtatgttgatgctgtcatgacaatccccaa 367
Query: 736 gggaaccttgttccccatgtgtggcatgaaccttgccttcgacagggatctcattggccc 795
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 368 gggaaccttgttccccatgtgcggcatgaacctctgcttcgacagggatctcattggccc 427
Query: 796 tgctatgtactttggtctcatgggtgatggccagcccatcggtcgctacgacgacatgtg 855
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 428 tgctatgtactttggtctcatgggtgatggccagcccattggtcgctacgacgacatgtg 487
Query: 856 ggcaggatggtgtgtgaaggtcatctgcgaccacctgagcctg 898
||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 488 ggcaggatggtgtgtcaaggtcatctgcgaccacttgagcctg 530
>gb|BE594445.1|BE594445 PI1_33_E02.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 544
Score = 747 bits (377), Expect = 0.0
Identities = 476/507 (93%), Gaps = 4/507 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 39 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 97
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 98 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 157
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 158 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 217
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 218 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 277
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 337
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 397
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 457
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 458 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 517
Query: 505 caagaacctcctcagcccatccacccc 531
||||||| || | ||||||||||||||
Sbjct: 518 caagaacatcatgagcccatccacccc 544
>gb|BG487511.1|BG487511 EM1_65_H11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 747 bits (377), Expect = 0.0
Identities = 476/507 (93%), Gaps = 4/507 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 50 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 108
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 109 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 168
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 228
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 288
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 348
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 408
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 468
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 469 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 528
Query: 505 caagaacctcctcagcccatccacccc 531
||||||| || | ||||||||||||||
Sbjct: 529 caagaacatcatgagcccatccacccc 555
>gb|BE365252.1|BE365252 PI1_26_B07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 462
Score = 735 bits (371), Expect = 0.0
Identities = 431/451 (95%)
Strand = Plus / Plus
Query: 448 ctgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaa 507
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9 ctgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacatcaa 68
Query: 508 gaacctcctcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtga 567
|||| || | ||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 69 gaacatcatgagcccatccaccccgttcttcttcaacaccctgtatgacccctaccgcga 128
Query: 568 gggtgctgactttgtgcgtggataccccttcagcctcagggagggtgctcacaccgccgt 627
|||||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||
Sbjct: 129 gggtgctgactttgtgcgtggataccccttcagcctcagggagggtacccacactgctgt 188
Query: 628 ctcccacggcctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcc 687
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctcccatggcctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcc 248
Query: 688 caaggagaggaatgagaggtatgttgatgctgtcatgacaatccccaagggaaccttgtt 747
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 taaggagaggaacgagaggtatgttgatgctgtcatgacaatccccaagggaaccttgtt 308
Query: 748 ccccatgtgtggcatgaaccttgccttcgacagggatctcattggccctgctatgtactt 807
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 309 ccccatgtgcggcatgaacctctgcttcgacagggatctcattggccctgctatgtactt 368
Query: 808 tggtctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggcaggatggtg 867
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 369 tggtctcatgggtgatggccagcccattggtcgctacgacgacatgtgggcaggatggtg 428
Query: 868 tgtgaaggtcatctgcgaccacctgagcctg 898
||| |||||||||||||||||| ||||||||
Sbjct: 429 tgtcaaggtcatctgcgaccacttgagcctg 459
>gb|BF705573.1|BF705573 RHIZ2_4_G12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 533
Score = 735 bits (371), Expect = 0.0
Identities = 472/505 (93%), Gaps = 13/505 (2%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 39 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc------- 91
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| |||| ||||||||| | |||||||||||||||||||||||||||||||||| ||||
Sbjct: 92 gcgagcaccaccaccacc---tgcggcaatggcgggcacggtgacggtcccgggggcgtc 148
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ggtcccctcgacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 208
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 209 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 268
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 328
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 329 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 388
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cgcgtgaggctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 448
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 449 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 508
Query: 505 caagaacctcctcagcccatccacc 529
||||||| || | ||||||||||||
Sbjct: 509 caagaacatcatgagcccatccacc 533
>gb|BF705506.1|BF705506 RHIZ2_4_G12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 674
Score = 733 bits (370), Expect = 0.0
Identities = 445/470 (94%)
Strand = Plus / Plus
Query: 741 ccttgttccccatgtgtggcatgaaccttgccttcgacagggatctcattggccctgcta 800
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ccttgttccccatgtgcggcatgaacctctgcttcgacagggatctcattggccctgcta 60
Query: 801 tgtactttggtctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggcag 860
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 tgtactttggtctcatgggtgatggccagcccattggtcgctacgacgacatgtgggcag 120
Query: 861 gatggtgtgtgaaggtcatctgcgaccacctgagcctgggagtcaagactggcctgccat 920
|||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 121 gatggtgtgtcaaggtcatctgcgaccacttgagcctgggagtcaagaccggcctgccat 180
Query: 921 acatctggcacagcaaggctagcaaccccttcgttaacttgaagaaggaatacaagggca 980
||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||
Sbjct: 181 acatctggcacagcaaggctagcaacccctttgtcaacttgaggaaggaatacaagggca 240
Query: 981 tcttctggcaggaggacatcatccccttcttccagaacgtgaccatccccaaggactgcg 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 241 tcttctggcaggaggacatcatccccttcttccagaacgtgaccatccccaaggattgtg 300
Query: 1041 acaccgtccaaaagtgctacatctacctctctggacaagtgaaggagaagctgggcacga 1100
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 acaccgtccagaagtgctacatctacctctctggacaggtgaaggagaagctgggcacga 360
Query: 1101 ttgacccctactttgtcaagctcggtgacgccatggtcacctggatcgaggcctgggatg 1160
|||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct: 361 ttgacccctactttgtcaagctcgccgatgccatggtcacctggattgaggcctgggatg 420
Query: 1161 agctgaacccgtcgacccctgccgccgcaaatggcaaggccaagtagatg 1210
|||||||||| | |||||||| |||| |||||||||||||||||||||
Sbjct: 421 agctgaacccagctacccctgctgccgagaatggcaaggccaagtagatg 470
Score = 274 bits (138), Expect = 2e-071
Identities = 164/170 (96%), Gaps = 2/170 (1%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 507 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 565
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 566 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 625
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattc 1405
||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 626 cttttgtagttgatgaaagggatttgtcgtcactatc-attacataattc 674
>gb|BM323494.1|BM323494 PIC1_20_A01.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 542
Score = 731 bits (369), Expect = 0.0
Identities = 459/487 (94%), Gaps = 4/487 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 50 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 108
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 109 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 168
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 228
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 288
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 348
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 408
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 468
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 469 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 528
Query: 505 caagaac 511
|||||||
Sbjct: 529 caagaac 535
>gb|BF587329.1|BF587329 FM1_35_B01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 497
Score = 729 bits (368), Expect = 0.0
Identities = 454/482 (94%), Gaps = 13/482 (2%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 26 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc------- 78
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| |||| ||||||||| | |||||||||||||||||||||||||||||||||| ||||
Sbjct: 79 gcgagcaccaccaccacc---tgcggcaatggcgggcacggtgacggtcccgggggcgtc 135
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ggtcccctcgacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 195
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 196 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 255
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 315
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 316 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 375
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cgcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 435
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacat 504
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 436 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagcagcacat 495
Query: 505 ca 506
||
Sbjct: 496 ca 497
>gb|BE366493.1|BE366493 PI1_33_E02.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 713
Score = 722 bits (364), Expect = 0.0
Identities = 439/464 (94%)
Strand = Plus / Plus
Query: 747 tccccatgtgtggcatgaaccttgccttcgacagggatctcattggccctgctatgtact 806
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 tccccatgtgcggcatgaacctctgcttcgacagggatctcattggccctgctatgtact 60
Query: 807 ttggtctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggcaggatggt 866
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ttggtctcatgggtgatggccagcccattggtcgctacgacgacatgtgggcaggatggt 120
Query: 867 gtgtgaaggtcatctgcgaccacctgagcctgggagtcaagactggcctgccatacatct 926
|||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||
Sbjct: 121 gtgtcaaggtcatctgcgaccacttgagcctgggagtcaagaccggtctgccatacatct 180
Query: 927 ggcacagcaaggctagcaaccccttcgttaacttgaagaaggaatacaagggcatcttct 986
||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||
Sbjct: 181 ggcacagcaaggctagcaacccctttgtcaacttgaggaaggaatacaagggcatcttct 240
Query: 987 ggcaggaggacatcatccccttcttccagaacgtgaccatccccaaggactgcgacaccg 1046
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 241 ggcaggaggacatcatccccttcttccagaacgtgaccatccccaaggattgcgacactg 300
Query: 1047 tccaaaagtgctacatctacctctctggacaagtgaaggagaagctgggcacgattgacc 1106
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 301 tccagaagtgctacatctacctctctggacaggtgaaggagaagctgggcacgattgacc 360
Query: 1107 cctactttgtcaagctcggtgacgccatggtcacctggatcgaggcctgggatgagctga 1166
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 361 cctactttgtcaagctcgccgacgccatggtcacctggattgaggcctgggatgagctga 420
Query: 1167 acccgtcgacccctgccgccgcaaatggcaaggccaagtagatg 1210
|||| | ||||||||| ||| |||||||||||||||||||||
Sbjct: 421 acccagctacccctgccaccgagaatggcaaggccaagtagatg 464
Score = 339 bits (171), Expect = 5e-091
Identities = 207/215 (96%), Gaps = 3/215 (1%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 501 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 559
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtg-gt 1354
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 560 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtgngt 619
Query: 1355 tcttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattcagacaataa 1414
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 620 tcttttgtagttgatgaaagggatttgtcgtcactatcatttacataattcagacaataa 679
Query: 1415 ttttatattgtgtaattctgagaatcaaagcactg 1449
|||||||||||||||| |||||||||||||||||
Sbjct: 680 -tttatattgtgtaattttgagaatcaaagcactg 713
>gb|BI643719.1|BI643719 IP1_56_B09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 522
Score = 706 bits (356), Expect = 0.0
Identities = 446/474 (94%), Gaps = 4/474 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 50 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 108
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 109 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 168
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 228
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 288
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 348
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 408
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 468
Query: 445 cgactgcttcgttgccaaggacccatctggcaaggatatcaatgctcttgagca 498
||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 469 cgactgcttcgttgccaaggacccaactggcaaggatatcaatgctcttgagca 522
>gb|BE357361.1|BE357361 DG1_148_C02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 636
Score = 680 bits (343), Expect = 0.0
Identities = 406/427 (95%)
Strand = Plus / Plus
Query: 784 tctcattggccctgctatgtactttggtctcatgggtgatggccagcccatcggtcgcta 843
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 tctcattggccctgctatgtactttggtctcatgggtgatggccagcccattggtcgcta 60
Query: 844 cgacgacatgtgggcaggatggtgtgtgaaggtcatctgcgaccacctgagcctgggagt 903
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 61 cgacgacatgtgggcaggatggtgtgtcaaggtcatctgcgaccacttgagcctgggagt 120
Query: 904 caagactggcctgccatacatctggcacagcaaggctagcaaccccttcgttaacttgaa 963
|||||| || |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 121 caagaccggtctgccatacatctggcacagcaaggctagcaacccctttgtcaacttgag 180
Query: 964 gaaggaatacaagggcatcttctggcaggaggacatcatccccttcttccagaacgtgac 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaggaatacaagggcatcttctggcaggaggacatcatccccttcttccagaacgtgac 240
Query: 1024 catccccaaggactgcgacaccgtccaaaagtgctacatctacctctctggacaagtgaa 1083
|||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 241 catccccaaggattgcgacactgtccagaagtgctacatctacctctctggacaggtgaa 300
Query: 1084 ggagaagctgggcacgattgacccctactttgtcaagctcggtgacgccatggtcacctg 1143
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 301 ggagaagctgggcacgattgacccctactttgtcaagctcgccgacgccatggtcacctg 360
Query: 1144 gatcgaggcctgggatgagctgaacccgtcgacccctgccgccgcaaatggcaaggccaa 1203
||| ||||||||||||||||||||||| | ||||||||| ||| ||||||||||||||
Sbjct: 361 gattgaggcctgggatgagctgaacccagctacccctgccaccgagaatggcaaggccaa 420
Query: 1204 gtagatg 1210
|||||||
Sbjct: 421 gtagatg 427
Score = 285 bits (144), Expect = 6e-075
Identities = 163/168 (97%), Gaps = 1/168 (0%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 464 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 522
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 523 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 582
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataat 1403
||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 583 cttttgtagttgatgaaagggatttgtcgtcactatcatttacataat 630
>gb|BG487624.1|BG487624 EM1_65_C11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 644
Score = 658 bits (332), Expect = 0.0
Identities = 395/416 (94%)
Strand = Plus / Plus
Query: 795 ctgctatgtactttggtctcatgggtgatggccagcccatcggtcgctacgacgacatgt 854
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ctgctatgtactttggtctcatgggtgatggccagcccattggtcgctacgacgacatgt 60
Query: 855 gggcaggatggtgtgtgaaggtcatctgcgaccacctgagcctgggagtcaagactggcc 914
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |
Sbjct: 61 gggcaggatggtgtgtcaaggtcatctgcgaccacttgagcctgggagtcaagaccggtc 120
Query: 915 tgccatacatctggcacagcaaggctagcaaccccttcgttaacttgaagaaggaataca 974
||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 121 tgccatacatctggcacagcaaggctagcaacccctttgtcaacttgaggaaggaataca 180
Query: 975 agggcatcttctggcaggaggacatcatccccttcttccagaacgtgaccatccccaagg 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agggcatcttctggcaggaggacatcatccccttcttccagaacgtgaccatccccaagg 240
Query: 1035 actgcgacaccgtccaaaagtgctacatctacctctctggacaagtgaaggagaagctgg 1094
| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 attgcgacactgtccagaagtgctacatctacctctctggacaggtgaaggagaagctgg 300
Query: 1095 gcacgattgacccctactttgtcaagctcggtgacgccatggtcacctggatcgaggcct 1154
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 301 gcacgattgacccctactttgtcaagctcgccgacgccatggtcacctggattgaggcct 360
Query: 1155 gggatgagctgaacccgtcgacccctgccgccgcaaatggcaaggccaagtagatg 1210
|||||||||||||||| | ||||||||| ||| |||||||||||||||||||||
Sbjct: 361 gggatgagctgaacccagctacccctgccaccgagaatggcaaggccaagtagatg 416
Score = 313 bits (158), Expect = 3e-083
Identities = 177/182 (97%), Gaps = 1/182 (0%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 453 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 511
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 512 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 571
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattcagacaataat 1415
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 572 cttttgtagttgatgaaagggatttgtcgtcactatcatttacataattcagacaataat 631
Query: 1416 tt 1417
||
Sbjct: 632 tt 633
>gb|BG947477.1|BG947477 IP1_4_H05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 476
Score = 644 bits (325), Expect = 0.0
Identities = 412/439 (93%), Gaps = 4/439 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 39 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 97
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 98 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 157
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 158 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 217
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 218 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 277
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 337
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 397
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 457
Query: 445 cgactgcttcgttgccaag 463
|||||||||||||||||||
Sbjct: 458 cgactgcttcgttgccaag 476
>gb|CF489487.1|CF489487 POL1_57_H01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_H01_A002 5', mRNA sequence
Length = 696
Score = 644 bits (325), Expect = 0.0
Identities = 370/385 (96%)
Strand = Plus / Plus
Query: 370 ctccttcaaggactccgcctgccgctgcttcggctacatggtctccaagaagaagtacat 429
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctccttcaaggactcggcgtgccgctgcttcggctacatggtctccaagaagaagtacat 371
Query: 430 ctacaccatcgacgacgactgcttcgttgccaaggacccatctggcaaggatatcaatgc 489
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 372 ctacaccatcgacgacgactgcttcgttgccaaggacccaactggcaaggatatcaatgc 431
Query: 490 tcttgagcagcacatcaagaacctcctcagcccatccaccccgttcttcttcaacaccct 549
|||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||
Sbjct: 432 tcttgagcagcacatcaagaacatcatgagcccatccaccccgttcttcttcaacaccct 491
Query: 550 gtacgacccctaccgtgagggtgctgactttgtgcgtggataccccttcagcctcaggga 609
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtatgacccctaccgcgagggtgctgactttgtgcgtggataccccttcagcctcaggga 551
Query: 610 gggtgctcacaccgccgtctcccacggcctgtggctgaacatccctgactatgatgctcc 669
|||| | ||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 552 gggtacccacactgctgtctcccatggcctgtggctgaacatccctgactatgatgctcc 611
Query: 670 cacacagctggtcaagcccaaggagaggaatgagaggtatgttgatgctgtcatgacaat 729
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 612 cacacagctggtcaagcctaaggagaggaacgagaggtatgttgatgctgtcatgacaat 671
Query: 730 ccccaagggaaccttgttccccatg 754
|||||||||||||||||||||||||
Sbjct: 672 ccccaagggaaccttgttccccatg 696
Score = 170 bits (86), Expect = 2e-040
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 230 cccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatc 289
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 225 cccttcttccagccctaccacctcatcatcgtgcaggacggcgaccccaccaagaccatc 284
Query: 290 aaggtgcccgagggcttcgactacgagctc 319
||||||||||||||||||||||||||||||
Sbjct: 285 aaggtgcccgagggcttcgactacgagctc 314
Score = 111 bits (56), Expect = 2e-022
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 296 cccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctcgg 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 cccgagggcttcgactacgagctctacaaccgcaacgacatcaaccgcatcctcgg 223
Score = 83.8 bits (42), Expect = 4e-014
Identities = 96/112 (85%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 61 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 119
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccg 136
| | ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 120 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccg 171
>gb|BE918253.1|BE918253 OV1_1_A06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 651
Score = 642 bits (324), Expect = 0.0
Identities = 387/408 (94%)
Strand = Plus / Plus
Query: 803 tactttggtctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggcagga 862
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tactttggtctcatgggtgatggccagcccattggtcgctacgacgacatgtgggcagga 60
Query: 863 tggtgtgtgaaggtcatctgcgaccacctgagcctgggagtcaagactggcctgccatac 922
|||||||| |||||||||||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 61 tggtgtgtcaaggtcatctgcgaccacttgagcctgggagtcaagaccggtctgccatac 120
Query: 923 atctggcacagcaaggctagcaaccccttcgttaacttgaagaaggaatacaagggcatc 982
||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||
Sbjct: 121 atctggcacagcaaggctagcaacccctttgtcaacttgaggaaggaatacaagggcatc 180
Query: 983 ttctggcaggaggacatcatccccttcttccagaacgtgaccatccccaaggactgcgac 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 ttctggcaggaggacatcatccccttcttccagaacgtgaccatccccaaggattgcgac 240
Query: 1043 accgtccaaaagtgctacatctacctctctggacaagtgaaggagaagctgggcacgatt 1102
|| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 241 actgtccagaagtgctacatctacctctctggacaggtgaaggagaagctgggcacgatt 300
Query: 1103 gacccctactttgtcaagctcggtgacgccatggtcacctggatcgaggcctgggatgag 1162
|||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 301 gacccctactttgtcaagctcgccgacgccatggtcacctggattgaggcctgggatgag 360
Query: 1163 ctgaacccgtcgacccctgccgccgcaaatggcaaggccaagtagatg 1210
|||||||| | ||||||||| ||| |||||||||||||||||||||
Sbjct: 361 ctgaacccagctacccctgccaccgagaatggcaaggccaagtagatg 408
Score = 325 bits (164), Expect = 7e-087
Identities = 196/204 (96%), Gaps = 2/204 (0%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 445 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 503
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 563
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattcagacaataat 1415
|| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 564 ctcttgtagttgatgaaagggatttgtcgtcactatcatttacataattcagacaataa- 622
Query: 1416 tttatattgtgtaattctgagaat 1439
|||||||||||||||| |||||||
Sbjct: 623 tttatattgtgtaattttgagaat 646
>gb|BI074663.1|BI074663 IP1_14_E07.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 486
Score = 642 bits (324), Expect = 0.0
Identities = 411/438 (93%), Gaps = 4/438 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 50 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 108
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 109 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 168
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 228
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 288
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 348
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 408
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 468
Query: 445 cgactgcttcgttgccaa 462
||||||||||||||||||
Sbjct: 469 cgactgcttcgttgccaa 486
>gb|BG487675.1|BG487675 EM1_65_H11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 640
Score = 640 bits (323), Expect = 0.0
Identities = 386/407 (94%)
Strand = Plus / Plus
Query: 804 actttggtctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggcaggat 863
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 actttggtctcatgggtgatggccagcccattggtcgctacgacgacatgtgggcaggat 60
Query: 864 ggtgtgtgaaggtcatctgcgaccacctgagcctgggagtcaagactggcctgccataca 923
||||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||
Sbjct: 61 ggtgtgtcaaggtcatctgcgaccacttgagcctgggagtcaagaccggtctgccataca 120
Query: 924 tctggcacagcaaggctagcaaccccttcgttaacttgaagaaggaatacaagggcatct 983
|||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||
Sbjct: 121 tctggcacagcaaggctagcaacccctttgtcaacttgaggaaggaatacaagggcatct 180
Query: 984 tctggcaggaggacatcatccccttcttccagaacgtgaccatccccaaggactgcgaca 1043
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 tctggcaggaggacatcatccccttcttccagaacgtgaccatccccaaggattgcgaca 240
Query: 1044 ccgtccaaaagtgctacatctacctctctggacaagtgaaggagaagctgggcacgattg 1103
| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 ctgtccagaagtgctacatctacctctctggacaggtgaaggagaagctgggcacgattg 300
Query: 1104 acccctactttgtcaagctcggtgacgccatggtcacctggatcgaggcctgggatgagc 1163
||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 301 acccctactttgtcaagctcgccgacgccatggtcacctggattgaggcctgggatgagc 360
Query: 1164 tgaacccgtcgacccctgccgccgcaaatggcaaggccaagtagatg 1210
||||||| | ||||||||| ||| |||||||||||||||||||||
Sbjct: 361 tgaacccagctacccctgccaccgagaatggcaaggccaagtagatg 407
Score = 325 bits (164), Expect = 7e-087
Identities = 190/196 (96%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 444 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 502
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 503 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 562
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattcagacaataat 1415
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 563 cttttgtagttgatgaaagggatttgtcgtcactatcatttacataattcagacaataa- 621
Query: 1416 tttatattgtgtaatt 1431
||||||||||||||||
Sbjct: 622 tttatattgtgtaatt 637
>gb|BI098307.1|BI098307 IP1_30_G07.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 483
Score = 638 bits (322), Expect = 0.0
Identities = 412/440 (93%), Gaps = 4/440 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 45 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 103
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 104 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 163
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 164 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 223
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 224 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 283
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 343
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 344 ccgcaacgacatcaaccgcatcctcggccccgaggcctcctgcatctccttcaaggactc 403
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 463
Query: 445 cgactgcttcgttgccaagg 464
||||||||||||||||||||
Sbjct: 464 cgactgcttcgttgccaagg 483
>gb|BE598474.1|BE598474 PI1_82_A10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 606
Score = 630 bits (318), Expect = e-179
Identities = 381/402 (94%)
Strand = Plus / Plus
Query: 809 ggtctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggcaggatggtgt 868
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctcatgggtgatggccagcccattggtcgctacgacgacatgtgggcaggatggtgt 60
Query: 869 gtgaaggtcatctgcgaccacctgagcctgggagtcaagactggcctgccatacatctgg 928
|| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||
Sbjct: 61 gtcaaggtcatctgcgaccacttgagcctgggagtcaagaccggtctgccatacatctgg 120
Query: 929 cacagcaaggctagcaaccccttcgttaacttgaagaaggaatacaagggcatcttctgg 988
||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||
Sbjct: 121 cacagcaaggctagcaacccctttgtcaacttgaggaaggaatacaagggcatcttctgg 180
Query: 989 caggaggacatcatccccttcttccagaacgtgaccatccccaaggactgcgacaccgtc 1048
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 181 caggaggacatcatccccttcttccagaacgtgaccatccccaaggattgcgacactgtc 240
Query: 1049 caaaagtgctacatctacctctctggacaagtgaaggagaagctgggcacgattgacccc 1108
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 cagaagtgctacatctacctctctggacaggtgaaggagaagctgggcacgattgacccc 300
Query: 1109 tactttgtcaagctcggtgacgccatggtcacctggatcgaggcctgggatgagctgaac 1168
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 tactttgtcaagctcgccgacgccatggtcacctggattgaggcctgggatgagctgaac 360
Query: 1169 ccgtcgacccctgccgccgcaaatggcaaggccaagtagatg 1210
|| | ||||||||| ||| |||||||||||||||||||||
Sbjct: 361 ccagctacccctgccaccgagaatggcaaggccaagtagatg 402
Score = 283 bits (143), Expect = 2e-074
Identities = 162/167 (97%), Gaps = 1/167 (0%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 439 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 497
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 498 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 557
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataa 1402
||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 558 cttttgtagttgatgaaagggatttgtcgtcactatcatttacataa 604
>gb|BI211923.1|BI211923 IP1_62_B06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 478
Score = 630 bits (318), Expect = e-179
Identities = 405/432 (93%), Gaps = 4/432 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 48 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 106
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 107 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 166
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 167 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 226
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 227 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 286
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 346
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 347 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 406
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 466
Query: 445 cgactgcttcgt 456
||||||||||||
Sbjct: 467 cgactgcttcgt 478
>gb|BI074350.1|BI074350 IP1_14_E08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 628 bits (317), Expect = e-178
Identities = 380/401 (94%)
Strand = Plus / Plus
Query: 810 gtctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggcaggatggtgtg 869
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctcatgggtgatggccagcccattggtcgctacgacgacatgtgggcaggatggtgtg 60
Query: 870 tgaaggtcatctgcgaccacctgagcctgggagtcaagactggcctgccatacatctggc 929
| |||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 61 tcaaggtcatctgcgaccacttgagcctgggagtcaagaccggtctgccatacatctggc 120
Query: 930 acagcaaggctagcaaccccttcgttaacttgaagaaggaatacaagggcatcttctggc 989
|||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||
Sbjct: 121 acagcaaggctagcaacccctttgtcaacttgaggaaggaatacaagggcatcttctggc 180
Query: 990 aggaggacatcatccccttcttccagaacgtgaccatccccaaggactgcgacaccgtcc 1049
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 181 aggaggacatcatccccttcttccagaacgtgaccatccccaaggattgcgacactgtcc 240
Query: 1050 aaaagtgctacatctacctctctggacaagtgaaggagaagctgggcacgattgacccct 1109
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 241 agaagtgctacatctacctctctggacaggtgaaggagaagctgggcacgattgacccct 300
Query: 1110 actttgtcaagctcggtgacgccatggtcacctggatcgaggcctgggatgagctgaacc 1169
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 actttgtcaagctcgccgacgccatggtcacctggattgaggcctgggatgagctgaacc 360
Query: 1170 cgtcgacccctgccgccgcaaatggcaaggccaagtagatg 1210
| | ||||||||| ||| |||||||||||||||||||||
Sbjct: 361 cagctacccctgccaccgagaatggcaaggccaagtagatg 401
Score = 272 bits (137), Expect = 9e-071
Identities = 153/157 (97%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 438 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 496
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 497 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 556
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatc 1392
||||||||||||||||||||||||||||||| |||||
Sbjct: 557 cttttgtagttgatgaaagggatttgtcgtcactatc 593
>gb|CF481067.1|CF481067 POL1_69_F08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_69_F08_A002 5', mRNA sequence
Length = 815
Score = 628 bits (317), Expect = e-178
Identities = 591/681 (86%), Gaps = 1/681 (0%)
Strand = Plus / Plus
Query: 156 cgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttcc 215
|||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 135 cgccgccgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttcc 194
Query: 216 tggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgacc 275
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 195 tggagatgtggcggcccttcttccagccgtaccacctcatcatcgtgcaggacggcgacc 254
Query: 276 cgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaaccgcaacgaca 335
|| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 255 cggccaagacgatcaaggtgcccgaggggttcgactacgagctctacaaccgcaacgaca 314
Query: 336 tcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactccgcctgccgct 395
||||| |||||||| |||| ||| || ||||||||||||||||||||||| |||||||
Sbjct: 315 tcaacaagatcctcggccccagggcgtcgtgcatctccttcaaggactccgcgtgccgct 374
Query: 396 gcttcggctacatggtctccaagaagaagtacatctacaccatcgacgacgactgcttcg 455
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 375 gcttcggctacatggtgtccaagaagaagtacatctacacgatcgacgacgactgcttcg 434
Query: 456 ttgccaaggacccatctggcaaggatatcaatgctcttgagcagcacatcaagaacctcc 515
| ||||||||||| | |||||||| ||| | || || | |||||||||||||||||| |
Sbjct: 435 tggccaaggaccccacgggcaaggacatcgacgcgctggcgcagcacatcaagaacctgc 494
Query: 516 tcagcccatccaccccgttcttcttcaacaccctgtacgacccctaccgtgagggtgctg 575
| |||| ||||| ||| |||||||||||||||| |||||||||||| ||| || |
Sbjct: 495 tgtgcccgtccacgccgctcttcttcaacaccctctacgacccctacgcgccgggcgccg 554
Query: 576 actttgtgcgtggatacccctt-cagcctcagggagggtgctcacaccgccgtctcccac 634
|||| ||||| || ||||| || ||||||| ||||||| | | || ||||| || |||
Sbjct: 555 acttcgtgcgcggctacccgttncagcctccgggagggcgtgccgacggccgtgtcgcac 614
Query: 635 ggcctgtggctgaacatccctgactatgatgctcccacacagctggtcaagcccaaggag 694
|| |||||||| |||||||| ||||| || || ||||| |||||||| |||||| ||||
Sbjct: 615 gggctgtggctcaacatcccggactacgacgcgcccacgcagctggtgaagccccgggag 674
Query: 695 aggaatgagaggtatgttgatgctgtcatgacaatccccaagggaaccttgttccccatg 754
|||| |||||||| || | || || ||||| ||||||||||| ||| | |||||||||
Sbjct: 675 cggaacgagaggtacgtgaacgccgtgatgaccatccccaagggcaccctcttccccatg 734
Query: 755 tgtggcatgaaccttgccttcgacagggatctcattggccctgctatgtactttggtctc 814
|| ||||||||||| ||||||||| | || ||||| ||||| || |||||||| || |||
Sbjct: 735 tgcggcatgaacctcgccttcgaccgcgacctcatcggccccgccatgtacttcggcctc 794
Query: 815 atgggtgatggccagcccatc 835
||||| || || |||||||||
Sbjct: 795 atgggcgacggacagcccatc 815
>gb|BI074664.1|BI074664 IP1_14_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 478
Score = 626 bits (316), Expect = e-177
Identities = 403/430 (93%), Gaps = 4/430 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 50 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 108
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 109 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 168
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 228
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 288
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 348
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 408
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 468
Query: 445 cgactgcttc 454
||||||||||
Sbjct: 469 cgactgcttc 478
>gb|AW563296.1|AW563296 LG1_228_E07.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 694
Score = 624 bits (315), Expect = e-177
Identities = 378/399 (94%)
Strand = Plus / Plus
Query: 812 ctcatgggtgatggccagcccatcggtcgctacgacgacatgtgggcaggatggtgtgtg 871
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcatgggtgatggccagcccattggtcgctacgacgacatgtgggcaggatggtgtgtc 60
Query: 872 aaggtcatctgcgaccacctgagcctgggagtcaagactggcctgccatacatctggcac 931
|||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||
Sbjct: 61 aaggtcatctgcgaccacttgagcctgggagtcaagaccggtctgccatacatctggcac 120
Query: 932 agcaaggctagcaaccccttcgttaacttgaagaaggaatacaagggcatcttctggcag 991
|||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||
Sbjct: 121 agcaaggctagcaacccctttgtcaacttgaggaaggaatacaagggcatcttctggcag 180
Query: 992 gaggacatcatccccttcttccagaacgtgaccatccccaaggactgcgacaccgtccaa 1051
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 181 gaggacatcatccccttcttccagaacgtgaccatccccaaggattgcgacactgtccag 240
Query: 1052 aagtgctacatctacctctctggacaagtgaaggagaagctgggcacgattgacccctac 1111
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 aagtgctacatctacctctctggacaggtgaaggagaagctgggcacgattgacccctac 300
Query: 1112 tttgtcaagctcggtgacgccatggtcacctggatcgaggcctgggatgagctgaacccg 1171
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 tttgtcaagctcgccgacgccatggtcacctggattgaggcctgggatgagctgaaccca 360
Query: 1172 tcgacccctgccgccgcaaatggcaaggccaagtagatg 1210
| ||||||||| ||| |||||||||||||||||||||
Sbjct: 361 gctacccctgccaccgagaatggcaaggccaagtagatg 399
Score = 379 bits (191), Expect = e-103
Identities = 220/227 (96%), Gaps = 2/227 (0%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 436 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 494
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 495 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 554
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattcagacaataat 1415
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 555 cttttgtagttgatgaaagggatttgtcgtcactatcatttacataattcagacaataa- 613
Query: 1416 tttatattgtgtaattctgagaatcaaagcactgtttgtgttatagc 1462
|||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 614 tttatattgtgtaattttgagaatcaaagcactgtttgtgttatagc 660
>gb|CD229738.1|CD229738 CCC1_18_C12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_18_C12_A007 5', mRNA sequence
Length = 479
Score = 624 bits (315), Expect = e-177
Identities = 404/432 (93%), Gaps = 4/432 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 49 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 107
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 108 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 167
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 168 ggtcccctcgacgccgctgctcaaggacgagctggacatcgngatcccgacgatccgcaa 227
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 228 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 287
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 347
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 348 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 407
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 467
Query: 445 cgactgcttcgt 456
||||||||||||
Sbjct: 468 cgactgcttcgt 479
>gb|BG322490.1|BG322490 EM1_28_F03.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 622 bits (314), Expect = e-176
Identities = 401/428 (93%), Gaps = 4/428 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 50 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 108
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 109 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 168
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 228
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 288
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 348
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 408
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 468
Query: 445 cgactgct 452
||||||||
Sbjct: 469 cgactgct 476
>gb|BI075949.1|BI075949 IP1_23_D03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 465
Score = 622 bits (314), Expect = e-176
Identities = 401/428 (93%), Gaps = 4/428 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 39 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 97
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 98 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 157
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 158 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 217
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 218 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 277
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 337
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 397
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ggcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 457
Query: 445 cgactgct 452
||||||||
Sbjct: 458 cgactgct 465
>gb|CF489399.1|CF489399 POL1_57_H01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_H01_A002 3', mRNA sequence
Length = 631
Score = 620 bits (313), Expect = e-176
Identities = 376/397 (94%)
Strand = Plus / Plus
Query: 814 catgggtgatggccagcccatcggtcgctacgacgacatgtgggcaggatggtgtgtgaa 873
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 catgggtgatggccagcccattggtcgctacgacgacatgtgggcaggatggtgtgtcaa 60
Query: 874 ggtcatctgcgaccacctgagcctgggagtcaagactggcctgccatacatctggcacag 933
|||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 61 ggtcatctgcgaccacttgagcctgggagtcaagaccggtctgccatacatctggcacag 120
Query: 934 caaggctagcaaccccttcgttaacttgaagaaggaatacaagggcatcttctggcagga 993
|||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||
Sbjct: 121 caaggctagcaacccctttgtcaacttgaggaaggaatacaagggcatcttctggcagga 180
Query: 994 ggacatcatccccttcttccagaacgtgaccatccccaaggactgcgacaccgtccaaaa 1053
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 181 ggacatcatccccttcttccagaacgtgaccatccccaaggattgcgacactgtccagaa 240
Query: 1054 gtgctacatctacctctctggacaagtgaaggagaagctgggcacgattgacccctactt 1113
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgctacatctacctctctggacaggtgaaggagaagctgggcacgattgacccctactt 300
Query: 1114 tgtcaagctcggtgacgccatggtcacctggatcgaggcctgggatgagctgaacccgtc 1173
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 301 tgtcaagctcgccgacgccatggtcacctggattgaggcctgggatgagctgaacccagc 360
Query: 1174 gacccctgccgccgcaaatggcaaggccaagtagatg 1210
||||||||| ||| |||||||||||||||||||||
Sbjct: 361 tacccctgccaccgagaatggcaaggccaagtagatg 397
Score = 325 bits (164), Expect = 7e-087
Identities = 190/196 (96%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 434 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 492
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 493 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 552
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattcagacaataat 1415
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 553 cttttgtagttgatgaaagggatttgtcgtcactatcatttacataattcagacaataa- 611
Query: 1416 tttatattgtgtaatt 1431
||||||||||||||||
Sbjct: 612 tttatattgtgtaatt 627
>gb|BG487731.1|BG487731 FM1_73_F01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 440
Score = 615 bits (310), Expect = e-174
Identities = 393/420 (93%), Gaps = 13/420 (3%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 31 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc------- 83
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| |||| ||||||||| | |||||||||||||||||||||||||||||||||| ||||
Sbjct: 84 gcgagcaccaccaccacc---tgcggcaatggcgggcacggtgacggtcccgggggcgtc 140
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ggtcccctcgacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 200
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 260
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 320
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 380
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgcgtgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 440
>gb|BE362813.1|BE362813 DG1_89_B03.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 634
Score = 613 bits (309), Expect = e-173
Identities = 372/393 (94%)
Strand = Plus / Plus
Query: 818 ggtgatggccagcccatcggtcgctacgacgacatgtgggcaggatggtgtgtgaaggtc 877
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 ggtgatggccagcccattggtcgctacgacgacatgtgggcaggatggtgtgtcaaggtc 60
Query: 878 atctgcgaccacctgagcctgggagtcaagactggcctgccatacatctggcacagcaag 937
|||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 61 atctgcgaccacttgagcctgggagtcaagaccggtctgccatacatctggcacagcaag 120
Query: 938 gctagcaaccccttcgttaacttgaagaaggaatacaagggcatcttctggcaggaggac 997
|||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 121 gctagcaacccctttgtcaacttgaggaaggaatacaagggcatcttctggcaggaggac 180
Query: 998 atcatccccttcttccagaacgtgaccatccccaaggactgcgacaccgtccaaaagtgc 1057
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 181 atcatccccttcttccagaacgtgaccatccccaaggattgcgacactgtccagaagtgc 240
Query: 1058 tacatctacctctctggacaagtgaaggagaagctgggcacgattgacccctactttgtc 1117
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tacatctacctctctggacaggtgaaggagaagctgggcacgattgacccctactttgtc 300
Query: 1118 aagctcggtgacgccatggtcacctggatcgaggcctgggatgagctgaacccgtcgacc 1177
||||||| |||||||||||||||||||| ||||||||||||||||||||||| | |||
Sbjct: 301 aagctcgccgacgccatggtcacctggattgaggcctgggatgagctgaacccagctacc 360
Query: 1178 cctgccgccgcaaatggcaaggccaagtagatg 1210
|||||| ||| |||||||||||||||||||||
Sbjct: 361 cctgccaccgagaatggcaaggccaagtagatg 393
Score = 317 bits (160), Expect = 2e-084
Identities = 200/208 (96%), Gaps = 4/208 (1%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 430 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 488
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 489 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 548
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattcaga-caataa 1414
||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||
Sbjct: 549 cttttgtagttgatgaaagggatttgtcgtcactatcatttacataattcagaccaataa 608
Query: 1415 ttttatattgtgtaattctgagaatcaa 1442
|||||||||||||||| ||||||||||
Sbjct: 609 -tttatattgtgtaatt-tgagaatcaa 634
>gb|BE918399.1|BE918399 OV1_3_B06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 632
Score = 611 bits (308), Expect = e-173
Identities = 371/392 (94%)
Strand = Plus / Plus
Query: 819 gtgatggccagcccatcggtcgctacgacgacatgtgggcaggatggtgtgtgaaggtca 878
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 gtgatggccagcccattggtcgctacgacgacatgtgggcaggatggtgtgtcaaggtca 60
Query: 879 tctgcgaccacctgagcctgggagtcaagactggcctgccatacatctggcacagcaagg 938
||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 61 tctgcgaccacttgagcctgggagtcaagaccggtctgccatacatctggcacagcaagg 120
Query: 939 ctagcaaccccttcgttaacttgaagaaggaatacaagggcatcttctggcaggaggaca 998
||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 ctagcaacccctttgtcaacttgaggaaggaatacaagggcatcttctggcaggaggaca 180
Query: 999 tcatccccttcttccagaacgtgaccatccccaaggactgcgacaccgtccaaaagtgct 1058
||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 181 tcatccccttcttccagaacgtgaccatccccaaggattgcgacactgtccagaagtgct 240
Query: 1059 acatctacctctctggacaagtgaaggagaagctgggcacgattgacccctactttgtca 1118
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acatctacctctctggacaggtgaaggagaagctgggcacgattgacccctactttgtca 300
Query: 1119 agctcggtgacgccatggtcacctggatcgaggcctgggatgagctgaacccgtcgaccc 1178
|||||| |||||||||||||||||||| ||||||||||||||||||||||| | ||||
Sbjct: 301 agctcgccgacgccatggtcacctggattgaggcctgggatgagctgaacccagctaccc 360
Query: 1179 ctgccgccgcaaatggcaaggccaagtagatg 1210
||||| ||| |||||||||||||||||||||
Sbjct: 361 ctgccaccgagaatggcaaggccaagtagatg 392
Score = 317 bits (160), Expect = 2e-084
Identities = 189/196 (96%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 1236 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttttgagaagg 1295
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 429 aaaagaaagtatgattgggtcctgcctaggccccatagatatagctcttttt-gagaggg 487
Query: 1296 aagagagattaattcagcagcagcttttataaattctttgttgtcatgaagcaggtggtt 1355
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 488 aagagagattaattcagcagcagcttttataaattctttgttgttatgaagcaggtggtt 547
Query: 1356 cttttgtagttgatgaaagggatttgtcgtcgctatcgtttacataattcagacaataat 1415
|| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 548 ctcttgtagttgatgaaagggatttgtcgtcactatcatttacataattcagacaataa- 606
Query: 1416 tttatattgtgtaatt 1431
||||||||||||||||
Sbjct: 607 tttatattgtgtaatt 622
>gb|BG947826.1|BG947826 IP1_5_F06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 477
Score = 609 bits (307), Expect = e-172
Identities = 400/429 (93%), Gaps = 4/429 (0%)
Strand = Plus / Plus
Query: 28 ccggtccggcagcagagagcgg---gggtgcagagagatcgagatccggaggccgcgagt 84
||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 50 ccggtccggtagcagagagcggagagggggcagagagatcgagatccggaggc-gcgagc 108
Query: 85 gggagcgccaccaccagcgtctgcggcaatggcgggcacggtgacggtcccggggtcgtc 144
| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 109 accaccaccaccaccacgacctgcggcaatggcgggcacggtgacggtcccgggggcgtc 168
Query: 145 gaccccctccacgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaa 204
| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 ggtcccctcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaa 228
Query: 205 cctcgacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgca 264
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctcgacttcctcgagatgtggaggcccttcttccagccctaccacctcatcatcgtgca 288
Query: 265 ggacggcgacccgaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 324
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggacggcgaccccaccaagaccatcaaggtgcccgagggcttcgactacgagctctacaa 348
Query: 325 ccgcaacgacatcaaccgcatcctcgggcccaaggcctcctgcatctccttcaaggactc 384
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ccgcaacgacatcaaccgcatcctcggccccaaggcctcctgcatctccttcaaggactc 408
Query: 385 cgcctgccgctgcttcggctacatggtctccaagaagaagtacatctacaccatcgacga 444
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 409 ggcgtgccgctgcttcggctacatggtctccaagaaagagtacatctacaccatcgacga 468
Query: 445 cgactgctt 453
|||||||||
Sbjct: 469 cgactgctt 477
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 455,395
Number of Sequences: 832831
Number of extensions: 455395
Number of successful extensions: 127721
Number of sequences better than 0.5: 182
Number of HSP's better than 0.5 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127050
Number of HSP's gapped (non-prelim): 515
length of query: 1563
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1543
effective length of database: 474,703,049
effective search space: 732466804607
effective search space used: 732466804607
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)