BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AB021175.2.1
(1225 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW170038.1|CW170038 104_580_11154992_148_36515_028 Sorgh... 571 e-161
gb|CW245587.1|CW245587 104_706_11221046_148_35077_055 Sorgh... 571 e-161
gb|CD223319.1|CD223319 CCC1_27_G12.b1_A007 Callus culture/c... 571 e-161
gb|CX610525.1|CX610525 ANR1_19_F05.b1_A002 Anaerobic roots ... 571 e-161
gb|BG556244.1|BG556244 EM1_67_E09.g1_A002 Embryo 1 (EM1) So... 565 e-159
gb|CW245588.1|CW245588 104_706_11221046_148_37599_055 Sorgh... 563 e-158
gb|BG739375.1|BG739375 EM1_82_B10.g1_A002 Embryo 1 (EM1) So... 563 e-158
gb|CD227894.1|CD227894 CCC1_56_D12.g1_A007 Callus culture/c... 563 e-158
gb|CD229899.1|CD229899 CCC1_20_C06.g1_A007 Callus culture/c... 563 e-158
gb|CF427473.1|CF427473 PH1_1_H09.g1_A002 Phosphorous-defici... 563 e-158
gb|CX610612.1|CX610612 ANR1_19_F05.g1_A002 Anaerobic roots ... 563 e-158
gb|CX621063.1|CX621063 GABR1_55_F07.g1_A002 GA- or brassino... 563 e-158
gb|BG487560.1|BG487560 EM1_67_E09.b1_A002 Embryo 1 (EM1) So... 557 e-157
gb|BG739542.1|BG739542 EM1_82_B10.b1_A002 Embryo 1 (EM1) So... 557 e-157
gb|CD227920.1|CD227920 CCC1_56_D09.g1_A007 Callus culture/c... 557 e-157
gb|CD430045.1|CD430045 ETH1_13_E09.g1_A002 Ethylene-treated... 557 e-157
gb|CX607132.1|CX607132 ANR1_6_H04.g1_A002 Anaerobic roots S... 557 e-157
gb|CD224076.1|CD224076 CCC1_31_H11.g1_A007 Callus culture/c... 555 e-156
gb|CD225472.1|CD225472 CCC1_3_D06.g1_A007 Callus culture/ce... 555 e-156
gb|CD226863.1|CD226863 CCC1_48_H08.g1_A007 Callus culture/c... 555 e-156
gb|CX607040.1|CX607040 ANR1_6_H04.b1_A002 Anaerobic roots S... 555 e-156
gb|CD227701.1|CD227701 CCC1_53_E01.b1_A007 Callus culture/c... 553 e-155
gb|CD225005.1|CD225005 CCC1_37_F06.g1_A007 Callus culture/c... 549 e-154
gb|CD227802.1|CD227802 CCC1_53_C05.g1_A007 Callus culture/c... 549 e-154
gb|CD223344.1|CD223344 CCC1_27_G12.g1_A007 Callus culture/c... 547 e-154
gb|CD223966.1|CD223966 CCC1_31_H11.b1_A007 Callus culture/c... 541 e-152
gb|BG487643.1|BG487643 EM1_65_E08.g1_A002 Embryo 1 (EM1) So... 539 e-151
gb|CD229676.1|CD229676 CCC1_18_F05.g1_A007 Callus culture/c... 539 e-151
gb|CD219479.1|CD219479 CCC1_57_E11.b1_A007 Callus culture/c... 533 e-149
gb|CD227695.1|CD227695 CCC1_53_E04.b1_A007 Callus culture/c... 529 e-148
gb|CW265262.1|CW265262 104_734_11231767_116_35257_024 Sorgh... 492 e-137
gb|CF432714.1|CF432714 NIT1_18_G04.g1_A002 Nitrogen-deficie... 470 e-130
gb|BG487479.1|BG487479 EM1_65_E08.b1_A002 Embryo 1 (EM1) So... 464 e-129
gb|CD228642.1|CD228642 CCC1_8_A01.g1_A007 Callus culture/ce... 434 e-120
gb|CN127915.1|CN127915 RHOH1_25_H02.g1_A002 Acid- and alkal... 424 e-117
gb|CW245586.1|CW245586 104_706_11221046_116_37600_055 Sorgh... 404 e-111
gb|CD226775.1|CD226775 CCC1_48_H08.b1_A007 Callus culture/c... 402 e-110
gb|CW245585.1|CW245585 104_706_11221046_116_35081_055 Sorgh... 400 e-109
gb|CD224897.1|CD224897 CCC1_37_F06.b1_A007 Callus culture/c... 400 e-109
gb|CN126295.1|CN126295 RHOH1_16_G06.b1_A002 Acid- and alkal... 396 e-108
gb|CN126384.1|CN126384 RHOH1_16_G06.g1_A002 Acid- and alkal... 396 e-108
gb|CF430946.1|CF430946 NIT1_1_H06.g1_A002 Nitrogen-deficien... 373 e-101
gb|CF428909.1|CF428909 PH1_18_E02.g1_A002 Phosphorous-defic... 331 9e-089
gb|CW251968.1|CW251968 104_714_11224234_116_35067_033 Sorgh... 307 1e-081
gb|CW490208.1|CW490208 fsbb001f275i13k0 Sorghum methylation... 307 1e-081
gb|CW072243.1|CW072243 104_325_10592151_116_30541 Sorghum m... 295 5e-078
gb|CW241279.1|CW241279 104_700_11218680_148_37541_090 Sorgh... 289 3e-076
gb|CW257668.1|CW257668 104_723_11227460_148_35155_076 Sorgh... 285 5e-075
gb|CL150226.1|CL150226 104_331_10778370_114_31355_306 Sorgh... 278 1e-072
gb|CW201025.1|CW201025 104_626_11184349_148_36933_051 Sorgh... 268 1e-069
gb|CX620981.1|CX620981 GABR1_55_F07.b1_A002 GA- or brassino... 260 3e-067
gb|CF428899.1|CF428899 PH1_18_E09.g1_A002 Phosphorous-defic... 246 4e-063
gb|CF430845.1|CF430845 NIT1_1_H06.b1_A002 Nitrogen-deficien... 240 3e-061
gb|CW315799.1|CW315799 104_807_11472554_116_35843_015 Sorgh... 226 4e-057
gb|CD235577.1|CD235577 SS1_36_G11.g1_A012 Salt-stressed see... 218 9e-055
gb|CF433982.1|CF433982 NIT1_31_D04.g1_A002 Nitrogen-deficie... 218 9e-055
gb|CN130629.1|CN130629 RHOH1_42_F06.g1_A002 Acid- and alkal... 218 9e-055
gb|CN138740.1|CN138740 OX1_13_D08.g1_A002 Oxidatively-stres... 218 9e-055
gb|CX606349.1|CX606349 ANR1_2_C01.g1_A002 Anaerobic roots S... 218 9e-055
gb|CX609133.1|CX609133 ANR1_10_G12.g1_A002 Anaerobic roots ... 218 9e-055
gb|CX615009.1|CX615009 GABR1_17_D03.g1_A002 GA- or brassino... 218 9e-055
gb|CX618625.1|CX618625 GABR1_40_E09.g1_A002 GA- or brassino... 218 9e-055
gb|CF427457.1|CF427457 PH1_1_D07.g1_A002 Phosphorous-defici... 212 6e-053
gb|CN131509.1|CN131509 RHOH1_48_C08.g1_A002 Acid- and alkal... 210 2e-052
gb|CX615362.1|CX615362 GABR1_19_E05.g1_A002 GA- or brassino... 210 2e-052
gb|CD219581.1|CD219581 CCC1_57_E11.g1_A007 Callus culture/c... 204 1e-050
gb|CX616037.1|CX616037 GABR1_25_B02.g1_A002 GA- or brassino... 202 6e-050
gb|CL189546.1|CL189546 104_406_10902373_114_32469_049 Sorgh... 200 2e-049
gb|CW251969.1|CW251969 104_714_11224234_148_35071_033 Sorgh... 200 2e-049
gb|CW347426.1|CW347426 fsbb001f007f08f0 Sorghum methylation... 200 2e-049
gb|CW382245.1|CW382245 fsbb001f064a16f0 Sorghum methylation... 200 2e-049
gb|CW490207.1|CW490207 fsbb001f275i13f0 Sorghum methylation... 200 2e-049
gb|CL196090.1|CL196090 104_422_10942830_114_32319_031 Sorgh... 194 1e-047
gb|CW257667.1|CW257667 104_723_11227460_116_35159_076 Sorgh... 194 1e-047
gb|CL150227.1|CL150227 104_331_10778370_116_31356_306 Sorgh... 190 2e-046
gb|BZ348485.1|BZ348485 hp58c02.g2 WGS-SbicolorF (JM107 adap... 188 8e-046
gb|CW170171.1|CW170171 104_580_11155065_116_36509_039 Sorgh... 188 8e-046
gb|CW323217.1|CW323217 104_817_11476514_116_35958_009 Sorgh... 178 8e-043
gb|CD225367.1|CD225367 CCC1_3_D06.b1_A007 Callus culture/ce... 157 3e-036
gb|CW222773.1|CW222773 104_658_11202555_116_37181_010 Sorgh... 151 2e-034
gb|CW222774.1|CW222774 104_658_11202555_148_37182_010 Sorgh... 151 2e-034
gb|CW022976.1|CW022976 104_162_10432168_5_30000 Sorghum met... 133 4e-029
gb|CD233122.1|CD233122 SS1_11_D05.g1_A012 Salt-stressed see... 133 4e-029
gb|CX609563.1|CX609563 ANR1_13_A05.g1_A002 Anaerobic roots ... 133 4e-029
gb|CX611921.1|CX611921 ANR1_27_B02.g1_A002 Anaerobic roots ... 133 4e-029
gb|CX612111.1|CX612111 ANR1_28_C05.g1_A002 Anaerobic roots ... 133 4e-029
gb|CX613689.1|CX613689 GABR1_9_D06.g1_A002 GA- or brassinol... 133 4e-029
gb|CD225047.1|CD225047 CCC1_37_H01.g1_A007 Callus culture/c... 131 2e-028
gb|CD429468.1|CD429468 ETH1_4_D08.g1_A002 Ethylene-treated ... 131 2e-028
gb|CX607779.1|CX607779 ANR1_30_E05.g1_A002 Anaerobic roots ... 129 7e-028
gb|CN138657.1|CN138657 OX1_13_D08.b1_A002 Oxidatively-stres... 127 3e-027
gb|CX607377.1|CX607377 ANR1_8_F11.b1_A002 Anaerobic roots S... 127 3e-027
gb|CX615277.1|CX615277 GABR1_19_E05.b1_A002 GA- or brassino... 127 3e-027
gb|CN127041.1|CN127041 RHOH1_20_E05.g1_A002 Acid- and alkal... 125 1e-026
gb|CF431003.1|CF431003 NIT1_4_B04.b1_A002 Nitrogen-deficien... 119 6e-025
gb|CN130552.1|CN130552 RHOH1_42_F06.b1_A002 Acid- and alkal... 119 6e-025
gb|CW363882.1|CW363882 fsbb001f035l01f0 Sorghum methylation... 117 3e-024
gb|CW113669.1|CW113669 104_488_11105572_148_34562_014 Sorgh... 115 1e-023
gb|CL174521.1|CL174521 104_379_10891693_116_31769_061 Sorgh... 111 2e-022
gb|CW040234.1|CW040234 104_273_10505995_114_30263 Sorghum m... 111 2e-022
gb|CW081794.1|CW081794 104_422_10942830_114_32348_031 Sorgh... 111 2e-022
gb|CN128152.1|CN128152 RHOH1_27_H02.b1_A002 Acid- and alkal... 111 2e-022
gb|CX610812.1|CX610812 ANR1_21_A08.b1_A002 Anaerobic roots ... 111 2e-022
gb|CF426888.1|CF426888 PH1_2_A02.b1_A002 Phosphorous-defici... 107 2e-021
gb|CW390165.1|CW390165 fsbb001f075l10k0 Sorghum methylation... 94 4e-017
gb|CW166934.1|CW166934 104_575_11153325_116_36768_081 Sorgh... 92 1e-016
gb|CW270551.1|CW270551 104_742_11402487_116_35332_060 Sorgh... 92 1e-016
gb|CW270552.1|CW270552 104_742_11402487_148_35336_060 Sorgh... 92 1e-016
gb|CW400147.1|CW400147 fsbb001f090f06f0 Sorghum methylation... 92 1e-016
gb|CW396333.1|CW396333 fsbb001f084l18f0 Sorghum methylation... 86 9e-015
gb|CN131436.1|CN131436 RHOH1_48_C08.b1_A002 Acid- and alkal... 86 9e-015
gb|CW265263.1|CW265263 104_734_11231767_148_35261_024 Sorgh... 84 4e-014
gb|CF431046.1|CF431046 NIT1_4_B04.g1_A002 Nitrogen-deficien... 78 2e-012
gb|CW022975.1|CW022975 104_162_10432168_1_30008 Sorghum met... 76 9e-012
gb|CW323218.1|CW323218 104_817_11476514_148_35959_009 Sorgh... 76 9e-012
gb|CW394408.1|CW394408 fsbb001f081p21k0 Sorghum methylation... 76 9e-012
gb|CD233024.1|CD233024 SS1_11_D05.b1_A012 Salt-stressed see... 76 9e-012
gb|CD429417.1|CD429417 ETH1_4_D08.b1_A002 Ethylene-treated ... 76 9e-012
gb|CF430883.1|CF430883 NIT1_1_B10.b1_A002 Nitrogen-deficien... 76 9e-012
gb|CX607694.1|CX607694 ANR1_30_E05.b1_A002 Anaerobic roots ... 76 9e-012
gb|CX609050.1|CX609050 ANR1_10_G12.b1_A002 Anaerobic roots ... 76 9e-012
gb|CX609478.1|CX609478 ANR1_13_A05.b1_A002 Anaerobic roots ... 76 9e-012
gb|CX611834.1|CX611834 ANR1_27_B02.b1_A002 Anaerobic roots ... 76 9e-012
gb|CX612021.1|CX612021 ANR1_28_C05.b1_A002 Anaerobic roots ... 76 9e-012
gb|CW390164.1|CW390164 fsbb001f075l10f0 Sorghum methylation... 72 1e-010
gb|CW463792.1|CW463792 fsbb001f212k15k0 Sorghum methylation... 72 1e-010
gb|CF426915.1|CF426915 PH1_2_A02.g1_A002 Phosphorous-defici... 72 1e-010
gb|CL188962.1|CL188962 104_405_10901951_114_32452_084 Sorgh... 70 5e-010
gb|CW072242.1|CW072242 104_325_10592151_114_30537 Sorghum m... 70 5e-010
gb|CW195234.1|CW195234 104_618_11180531_116_37427_036 Sorgh... 70 5e-010
gb|BE355739.1|BE355739 DG1_116_F07.g1_A002 Dark Grown 1 (DG... 70 5e-010
gb|BE360033.1|BE360033 DG1_60_C03.g2_A002 Dark Grown 1 (DG1... 70 5e-010
gb|CD224935.1|CD224935 CCC1_37_H01.b1_A007 Callus culture/c... 68 2e-009
gb|CF432353.1|CF432353 NIT1_13_D08.b1_A002 Nitrogen-deficie... 68 2e-009
gb|CX610895.1|CX610895 ANR1_21_A08.g1_A002 Anaerobic roots ... 66 8e-009
gb|CX613606.1|CX613606 GABR1_9_D06.b1_A002 GA- or brassinol... 62 1e-007
gb|CW466972.1|CW466972 fsbb001f218h08k0 Sorghum methylation... 56 8e-006
gb|CN125157.1|CN125157 RHOH1_9_G02.b1_A002 Acid- and alkali... 54 3e-005
gb|CX615962.1|CX615962 GABR1_25_B02.b1_A002 GA- or brassino... 54 3e-005
gb|CW166935.1|CW166935 104_575_11153325_148_36767_081 Sorgh... 52 1e-004
gb|BZ343962.1|BZ343962 hp58c02.b2 WGS-SbicolorF (JM107 adap... 50 5e-004
gb|CL188963.1|CL188963 104_405_10901951_116_32456_084 Sorgh... 50 5e-004
gb|CW166936.1|CW166936 104_575_11153326_148_36766_081 Sorgh... 48 0.002
gb|CW363883.1|CW363883 fsbb001f035l01k0 Sorghum methylation... 48 0.002
gb|CL183880.1|CL183880 104_396_10898469_114_31923_309 Sorgh... 44 0.030
gb|CL183881.1|CL183881 104_396_10898469_116_31924_309 Sorgh... 44 0.030
gb|CW067309.1|CW067309 104_314_10524186_115_30127 Sorghum m... 44 0.030
gb|CW104615.1|CW104615 104_473_11012525_148_34489_019 Sorgh... 44 0.030
gb|CW307464.1|CW307464 104_795_11468155_116_35728_072 Sorgh... 44 0.030
gb|CW466451.1|CW466451 fsbb001f217l04f0 Sorghum methylation... 44 0.030
gb|CW474682.1|CW474682 fsbb001f230k22k0 Sorghum methylation... 44 0.030
gb|CW497965.1|CW497965 fsbb001f290p17f0 Sorghum methylation... 44 0.030
gb|BG560137.1|BG560137 RHIZ2_69_G07.b1_A003 Rhizome2 (RHIZ2... 44 0.030
gb|CL158039.1|CL158039 104_346_10803258_114_31375_234 Sorgh... 42 0.12
gb|CL158040.1|CL158040 104_346_10803258_116_31376_234 Sorgh... 42 0.12
gb|CL163037.1|CL163037 104_355_10806849_116_31833_369 Sorgh... 42 0.12
gb|CW431738.1|CW431738 fsbb001f146b21f0 Sorghum methylation... 42 0.12
gb|CL698203.2|CL698203 SP__Ba0026J15.f SP__Ba Sorghum propi... 42 0.12
gb|BI140714.1|BI140714 IP1_52_H02.b1_A002 Immature pannicle... 42 0.12
gb|CN128209.1|CN128209 RHOH1_27_F12.g1_A002 Acid- and alkal... 42 0.12
gb|CL154922.1|CL154922 104_340_10781745_114_31469_225 Sorgh... 40 0.47
gb|CL154923.1|CL154923 104_340_10781745_116_31470_225 Sorgh... 40 0.47
gb|CL159818.1|CL159818 104_349_10804535_114_31381_359 Sorgh... 40 0.47
gb|CL174048.1|CL174048 104_378_10891300_148_31770_052 Sorgh... 40 0.47
gb|CW027914.1|CW027914 104_254_10498781_114_30395 Sorghum m... 40 0.47
gb|CW079118.1|CW079118 104_398_10899039_114_32366_060 Sorgh... 40 0.47
gb|CW079119.1|CW079119 104_398_10899039_116_32370_060 Sorgh... 40 0.47
gb|CW094564.1|CW094564 104_459_11000765_116_34275_029 Sorgh... 40 0.47
gb|CW108584.1|CW108584 104_480_11097605_148_34497_025 Sorgh... 40 0.47
gb|CW131688.1|CW131688 104_514_11115806_116_34785_051 Sorgh... 40 0.47
gb|CW168001.1|CW168001 104_577_11153910_148_36493_023 Sorgh... 40 0.47
gb|CW180104.1|CW180104 104_594_11160460_116_36637_008 Sorgh... 40 0.47
gb|CW188347.1|CW188347 104_608_11172980_148_36731_078 Sorgh... 40 0.47
gb|CW198607.1|CW198607 104_623_11183064_116_36843_090 Sorgh... 40 0.47
gb|CW204339.1|CW204339 104_632_11186489_116_37060_075 Sorgh... 40 0.47
gb|CW213829.1|CW213829 104_645_11191771_116_37038_072 Sorgh... 40 0.47
gb|CW221988.1|CW221988 104_657_11202140_116_37451_076 Sorgh... 40 0.47
gb|CW221989.1|CW221989 104_657_11202140_148_37450_076 Sorgh... 40 0.47
gb|CW246660.1|CW246660 104_707_11221432_148_35089_056 Sorgh... 40 0.47
gb|CW246661.1|CW246661 104_707_11221432_148_37607_056 Sorgh... 40 0.47
gb|CW268267.1|CW268267 104_738_11401187_148_35299_034 Sorgh... 40 0.47
gb|CW313582.1|CW313582 104_803_11471360_116_35787_018 Sorgh... 40 0.47
gb|CW321631.1|CW321631 104_815_11475658_116_35946_045 Sorgh... 40 0.47
gb|CW341379.1|CW341379 104_842_11486304_116_36172_084 Sorgh... 40 0.47
gb|CW341380.1|CW341380 104_842_11486304_148_36171_084 Sorgh... 40 0.47
gb|CW383934.1|CW383934 fsbb001f066l10f0 Sorghum methylation... 40 0.47
gb|CW383935.1|CW383935 fsbb001f066l10k0 Sorghum methylation... 40 0.47
gb|CW396087.1|CW396087 fsbb001f084g07f0 Sorghum methylation... 40 0.47
gb|CW419768.1|CW419768 fsbb001f124m09k0 Sorghum methylation... 40 0.47
gb|CW422386.1|CW422386 fsbb001f131k10k0 Sorghum methylation... 40 0.47
gb|CW451001.1|CW451001 fsbb001f189o06k0 Sorghum methylation... 40 0.47
gb|CW453298.1|CW453298 fsbb001f197d24f0 Sorghum methylation... 40 0.47
gb|CW480923.1|CW480923 fsbb001f240d17k0 Sorghum methylation... 40 0.47
gb|CW485990.1|CW485990 fsbb001f249a04f0 Sorghum methylation... 40 0.47
gb|BE366320.1|BE366320 PI1_32_A06.b1_A002 Pathogen induced ... 40 0.47
gb|BE594327.1|BE594327 PI1_32_A06.b2_A002 Pathogen induced ... 40 0.47
gb|BF586384.1|BF586384 FM1_28_C09.g1_A003 Floral-Induced Me... 40 0.47
gb|BF704804.1|BF704804 FM1_51_G03.b1_A003 Floral-Induced Me... 40 0.47
gb|BG355552.1|BG355552 EM1_17_G10.b1_A002 Embryo 1 (EM1) So... 40 0.47
gb|BI351397.1|BI351397 IP1_71_B02.b1_A002 Immature pannicle... 40 0.47
gb|BG355758.2|BG355758 EM1_19_B12.b1_A002 Embryo 1 (EM1) So... 40 0.47
gb|BM317622.1|BM317622 LG1_260_C08.b9_A002 Light Grown 1 (L... 40 0.47
gb|BM324589.1|BM324589 PIC1_33_B02.b1_A002 Pathogen-infecte... 40 0.47
gb|BM325357.1|BM325357 PIC1_43_C06.b1_A002 Pathogen-infecte... 40 0.47
gb|BM326166.1|BM326166 PIC1_66_F01.b1_A002 Pathogen-infecte... 40 0.47
gb|CB928399.1|CB928399 ABA1_15_A03.g1_A012 Abscisic acid-tr... 40 0.47
gb|CD212763.1|CD212763 HS1_16_H05.g1_A012 Heat-shocked seed... 40 0.47
gb|CD231656.1|CD231656 SS1_22_B06.g1_A012 Salt-stressed see... 40 0.47
gb|CD424157.1|CD424157 SA1_3_H02.g1_A002 Salicylic acid-tre... 40 0.47
gb|CD427648.1|CD427648 SA1_37_H08.g1_A002 Salicylic acid-tr... 40 0.47
gb|CD432231.1|CD432231 ETH1_26_E04.g1_A002 Ethylene-treated... 40 0.47
gb|CF432041.1|CF432041 NIT1_16_F08.g1_A002 Nitrogen-deficie... 40 0.47
gb|CN137037.1|CN137037 OX1_54_G02.g1_A002 Oxidatively-stres... 40 0.47
gb|CN141006.1|CN141006 OX1_48_F04.g1_A002 Oxidatively-stres... 40 0.47
gb|CN142969.1|CN142969 WOUND1_13_H10.b1_A002 Wounded leaves... 40 0.47
gb|CN148175.1|CN148175 WOUND1_54_D08.g1_A002 Wounded leaves... 40 0.47
gb|CX612155.1|CX612155 ANR1_28_G03.g1_A002 Anaerobic roots ... 40 0.47
>gb|CW170038.1|CW170038 104_580_11154992_148_36515_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154992, DNA
sequence
Length = 683
Score = 571 bits (288), Expect = e-161
Identities = 402/440 (91%)
Strand = Plus / Minus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 614 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 555
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 554 gcaccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtcttccgcatcgtcgcca 495
Query: 737 gcgtagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacg 796
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 494 acgtcgtgcccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacg 435
Query: 797 acggcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 856
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 acgacgacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 375
Query: 857 tgcacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacat 916
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 374 tccacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacct 315
Query: 917 ccaacatgcccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccg 976
|||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 314 ccaagatgcccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccg 255
Query: 977 actgcgccgtcgcacgcttcggcggacgccgacaccagcaagccaccgccgctaatattg 1036
|||| ||||||||||| || |||| | || ||||| || |||||| ||||||||
Sbjct: 254 actgtgccgtcgcacgatttcgcggcggacgccaccaagccgcgcccgccgttaatattg 195
Query: 1037 ccatgctcaccgacgacgac 1056
||||| ||||||||||||||
Sbjct: 194 ccatggtcaccgacgacgac 175
>gb|CW245587.1|CW245587 104_706_11221046_148_35077_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221046, DNA
sequence
Length = 696
Score = 571 bits (288), Expect = e-161
Identities = 402/440 (91%)
Strand = Plus / Minus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 625 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 566
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 565 gcaccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtcttccgcatcgtcgcca 506
Query: 737 gcgtagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacg 796
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 505 acgtcgtgcccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacg 446
Query: 797 acggcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 856
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acgacgacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 386
Query: 857 tgcacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacat 916
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 tccacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacct 326
Query: 917 ccaacatgcccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccg 976
|||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 ccaagatgcccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccg 266
Query: 977 actgcgccgtcgcacgcttcggcggacgccgacaccagcaagccaccgccgctaatattg 1036
|||| ||||||||||| || |||| | || ||||| || |||||| ||||||||
Sbjct: 265 actgtgccgtcgcacgatttcgcggcggacgccaccaagccgcgcccgccgttaatattg 206
Query: 1037 ccatgctcaccgacgacgac 1056
||||| ||||||||||||||
Sbjct: 205 ccatggtcaccgacgacgac 186
>gb|CD223319.1|CD223319 CCC1_27_G12.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_27_G12_A007 3', mRNA sequence
Length = 605
Score = 571 bits (288), Expect = e-161
Identities = 354/376 (94%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 19 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 78
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 79 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgtcttccgcatcgtcgcca 138
Query: 737 gcgtagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacg 796
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 139 acgtcgtgcccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacg 198
Query: 797 acggcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 856
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 acgacgacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 258
Query: 857 tgcacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacat 916
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 259 tccacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacct 318
Query: 917 ccaacatgcccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccg 976
|||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 319 ccaagatgcccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccg 378
Query: 977 actgcgccgtcgcacg 992
|||| |||||||||||
Sbjct: 379 actgtgccgtcgcacg 394
Score = 54.0 bits (27), Expect = 3e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1022 ccgccgctaatattgccatgctcaccgacgacgac 1056
|||||| ||||||||||||| ||||||||||||||
Sbjct: 424 ccgccgttaatattgccatggtcaccgacgacgac 458
>gb|CX610525.1|CX610525 ANR1_19_F05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_19_F05_A002 3', mRNA sequence
Length = 671
Score = 571 bits (288), Expect = e-161
Identities = 402/440 (91%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 69 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 128
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 129 gcaccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtcttccgcatcgtcgcca 188
Query: 737 gcgtagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacg 796
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 189 acgtcgtgcccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacg 248
Query: 797 acggcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 856
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 acgacgacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 308
Query: 857 tgcacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacat 916
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 309 tccacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacct 368
Query: 917 ccaacatgcccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccg 976
|||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 369 ccaagatgcccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccg 428
Query: 977 actgcgccgtcgcacgcttcggcggacgccgacaccagcaagccaccgccgctaatattg 1036
|||| ||||||||||| || |||| | || ||||| || |||||| ||||||||
Sbjct: 429 actgtgccgtcgcacgatttcgcggcggacgccaccaagccgcgcccgccgttaatattg 488
Query: 1037 ccatgctcaccgacgacgac 1056
||||| ||||||||||||||
Sbjct: 489 ccatggtcaccgacgacgac 508
>gb|BG556244.1|BG556244 EM1_67_E09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 578
Score = 565 bits (285), Expect = e-159
Identities = 399/437 (91%)
Strand = Plus / Plus
Query: 620 cgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcacccgca 679
|||||||||||||||| |||||||| |||||||| || || || ||||||||||||||||
Sbjct: 1 cgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcacccgca 60
Query: 680 ccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgccagcg 739
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||
Sbjct: 61 ccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtcttccgcatcgtcgccaacg 120
Query: 740 tagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacgacg 799
| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 121 tcgtgcccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacgacg 180
Query: 800 gcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgc 859
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 181 acgacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtcc 240
Query: 860 acggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacatcca 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 acggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacctcca 300
Query: 920 acatgcccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccgact 979
| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 301 agatgcccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccgact 360
Query: 980 gcgccgtcgcacgcttcggcggacgccgacaccagcaagccaccgccgctaatattgcca 1039
| ||||||||||| || |||| | || ||||| || |||||| |||||||||||
Sbjct: 361 gtgccgtcgcacgatttcgcggcggacgccaccaagccgcgcccgccgttaatattgcca 420
Query: 1040 tgctcaccgacgacgac 1056
|| ||||||||||||||
Sbjct: 421 tggtcaccgacgacgac 437
>gb|CW245588.1|CW245588 104_706_11221046_148_37599_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221046, DNA
sequence
Length = 639
Score = 563 bits (284), Expect = e-158
Identities = 401/440 (91%)
Strand = Plus / Minus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||| ||| |||||||| || || || |||||||||||||
Sbjct: 624 tgccgcgcttcgtcggcgcccgctagtcaccgcccacagctcccgccctgtccgtcaccc 565
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 564 gcaccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtcttccgcatcgtcgcca 505
Query: 737 gcgtagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacg 796
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 504 acgtcgtgcccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacg 445
Query: 797 acggcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 856
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acgacgacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 385
Query: 857 tgcacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacat 916
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 384 tccacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacct 325
Query: 917 ccaacatgcccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccg 976
|||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 ccaagatgcccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccg 265
Query: 977 actgcgccgtcgcacgcttcggcggacgccgacaccagcaagccaccgccgctaatattg 1036
|||| ||||||||||| || |||| | || ||||| || |||||| ||||||||
Sbjct: 264 actgtgccgtcgcacgatttcgcggcggacgccaccaagccgcgcccgccgttaatattg 205
Query: 1037 ccatgctcaccgacgacgac 1056
||||| ||||||||||||||
Sbjct: 204 ccatggtcaccgacgacgac 185
>gb|BG739375.1|BG739375 EM1_82_B10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 446
Score = 563 bits (284), Expect = e-158
Identities = 353/376 (93%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 28 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 87
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 88 gcaccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtcttccgcatcgtcgcca 147
Query: 737 gcgtagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacg 796
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 148 acgtcgtgcccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacg 207
Query: 797 acggcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 856
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 acgacgacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 267
Query: 857 tgcacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacat 916
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 268 tccacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacct 327
Query: 917 ccaacatgcccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccg 976
|||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 328 ccaagatgcccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccg 387
Query: 977 actgcgccgtcgcacg 992
|||| |||||||||||
Sbjct: 388 actgtgccgtcgcacg 403
>gb|CD227894.1|CD227894 CCC1_56_D12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_D12_A007 5', mRNA sequence
Length = 629
Score = 563 bits (284), Expect = e-158
Identities = 374/404 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 204 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 263
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 264 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 323
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 324 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 383
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 384 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 443
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 503
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagaggacgcccagg 549
||||| |||||||||||||||||||||||||||||||||| |||| | ||| |||| |
Sbjct: 504 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaagacccccaag 563
Query: 550 tgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 564 tggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 607
>gb|CD229899.1|CD229899 CCC1_20_C06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_20_C06_A007 5', mRNA sequence
Length = 659
Score = 563 bits (284), Expect = e-158
Identities = 374/404 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 217 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 276
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 277 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 336
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 337 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 396
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 397 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 456
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 516
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagaggacgcccagg 549
||||| |||||||||||||||||||||||||||||||||| |||| | ||| |||| |
Sbjct: 517 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaagacccccaag 576
Query: 550 tgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 577 tggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 620
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctg 641
||||||||||||||||||| |||||
Sbjct: 635 tgccgcgcttcgtcggcgcccgctg 659
>gb|CF427473.1|CF427473 PH1_1_H09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_1_H09_A002 5', mRNA sequence
Length = 713
Score = 563 bits (284), Expect = e-158
Identities = 374/404 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 208 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 267
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 268 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 327
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 328 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 387
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 388 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 447
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 507
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagaggacgcccagg 549
||||| |||||||||||||||||||||||||||||||||| |||| | ||| |||| |
Sbjct: 508 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaagacccccaag 567
Query: 550 tgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 568 tggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 611
Score = 123 bits (62), Expect = 4e-026
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 626 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 685
Query: 677 gcaccgcgcgcgtcaacaccgtcgtc 702
||||||||||||||||||||||||||
Sbjct: 686 gcaccgcgcgcgtcaacaccgtcgtc 711
>gb|CX610612.1|CX610612 ANR1_19_F05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_19_F05_A002 5', mRNA sequence
Length = 783
Score = 563 bits (284), Expect = e-158
Identities = 374/404 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 202 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 261
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 262 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 321
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 322 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 381
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 382 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 441
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 501
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagaggacgcccagg 549
||||| |||||||||||||||||||||||||||||||||| |||| | ||| |||| |
Sbjct: 502 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaagacccccaag 561
Query: 550 tgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 562 tggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 605
Score = 230 bits (116), Expect = 2e-058
Identities = 152/164 (92%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 620 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 679
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 680 gcaccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtcttccgcatcgtcgcca 739
Query: 737 gcgtagtgcccatcaccgccgaggactcgcggatccacaactac 780
||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 740 acgtcgtgcccatcaccgccgaggactccaggatccacaactac 783
>gb|CX621063.1|CX621063 GABR1_55_F07.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_55_F07_A002 5', mRNA sequence
Length = 686
Score = 563 bits (284), Expect = e-158
Identities = 374/404 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 194 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 253
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 254 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 313
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 314 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 373
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 374 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 433
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 493
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagaggacgcccagg 549
||||| |||||||||||||||||||||||||||||||||| |||| | ||| |||| |
Sbjct: 494 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaagacccccaag 553
Query: 550 tgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 554 tggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 597
Score = 101 bits (51), Expect = 1e-019
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 612 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 671
Query: 677 gcaccgcgcgcgtca 691
|||||||||||||||
Sbjct: 672 gcaccgcgcgcgtca 686
>gb|BG487560.1|BG487560 EM1_67_E09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 594
Score = 557 bits (281), Expect = e-157
Identities = 329/345 (95%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 196 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 255
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 256 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 315
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 316 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 375
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 376 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 435
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 495
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcc 534
||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 496 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgcc 540
>gb|BG739542.1|BG739542 EM1_82_B10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 557 bits (281), Expect = e-157
Identities = 329/345 (95%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 196 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 255
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 256 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 315
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 316 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 375
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 376 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 435
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 495
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcc 534
||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 496 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgcc 540
>gb|CD227920.1|CD227920 CCC1_56_D09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_D09_A007 5', mRNA sequence
Length = 664
Score = 557 bits (281), Expect = e-157
Identities = 329/345 (95%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 204 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 263
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 264 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 323
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 324 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 383
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 384 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 443
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 503
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcc 534
||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgcc 548
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccac 653
||||||||||||||||||| |||||||| ||||||||
Sbjct: 622 tgccgcgcttcgtcggcgcccgctggtcaccgcccac 658
>gb|CD430045.1|CD430045 ETH1_13_E09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_13_E09_A002 5', mRNA sequence
Length = 642
Score = 557 bits (281), Expect = e-157
Identities = 329/345 (95%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 203 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 262
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 263 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 322
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 323 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 382
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 383 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 442
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 502
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcc 534
||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 503 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgcc 547
Score = 105 bits (53), Expect = 1e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 687 cgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgccagcgtagtgcc 746
|||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||
Sbjct: 574 cgtcaacaccgtcgtcatcgagctcaggggcgtcttccgcatcgtcgccaacgtcgtgcc 633
Query: 747 catcaccgc 755
|||||||||
Sbjct: 634 catcaccgc 642
>gb|CX607132.1|CX607132 ANR1_6_H04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_H04_A002 5', mRNA sequence
Length = 753
Score = 557 bits (281), Expect = e-157
Identities = 329/345 (95%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 200 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 259
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 260 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 319
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 320 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 379
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 380 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 439
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 499
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcc 534
||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 500 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgcc 544
Score = 176 bits (89), Expect = 3e-042
Identities = 126/137 (91%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 618 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 677
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||
Sbjct: 678 gcaccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtc-tccgcatcgtcgcca 736
Query: 737 gcgtagtgcccatcacc 753
||| ||||||||||||
Sbjct: 737 acgtcgtgcccatcacc 753
>gb|CD224076.1|CD224076 CCC1_31_H11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_H11_A007 5', mRNA sequence
Length = 697
Score = 555 bits (280), Expect = e-156
Identities = 373/404 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 208 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 267
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 268 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 327
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 328 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 387
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 388 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 447
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 448 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctgaatccag 507
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagaggacgcccagg 549
||||| |||||||||||||||||||||||||||||||||| |||| | ||| |||| |
Sbjct: 508 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaagacccccaag 567
Query: 550 tgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 568 tggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 611
Score = 95.6 bits (48), Expect = 9e-018
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 626 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 685
Query: 677 gcaccgcgcgcg 688
||||||||||||
Sbjct: 686 gcaccgcgcgcg 697
>gb|CD225472.1|CD225472 CCC1_3_D06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_3_D06_A007 5', mRNA sequence
Length = 667
Score = 555 bits (280), Expect = e-156
Identities = 373/404 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 213 actctcaagtgcaccaacaccaaggacaacaagaccacctgcagcgccacctgcaacaag 272
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 273 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 332
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 333 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 392
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 393 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 452
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 512
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagaggacgcccagg 549
||||| |||||||||||||||||||||||||||||||||| |||| | ||| |||| |
Sbjct: 513 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaagacccccaag 572
Query: 550 tgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 573 tggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 616
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccac 653
||||||||||||||||||| |||||||| ||||||||
Sbjct: 631 tgccgcgcttcgtcggcgcccgctggtcaccgcccac 667
>gb|CD226863.1|CD226863 CCC1_48_H08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_48_H08_A007 5', mRNA sequence
Length = 654
Score = 555 bits (280), Expect = e-156
Identities = 373/404 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 198 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 257
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||
Sbjct: 258 cgatgccctcacaagtgccccatccagtgccccagctgcaagactttctgcttgtgcgac 317
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 318 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 377
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 378 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 437
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 497
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagaggacgcccagg 549
||||| |||||||||||||||||||||||||||||||||| |||| | ||| |||| |
Sbjct: 498 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaagacccccaag 557
Query: 550 tgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 558 tggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 601
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccac 653
||||||||||||||||||| |||||||| ||||||||
Sbjct: 616 tgccgcgcttcgtcggcgcccgctggtcaccgcccac 652
>gb|CX607040.1|CX607040 ANR1_6_H04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_H04_A002 3', mRNA sequence
Length = 740
Score = 555 bits (280), Expect = e-156
Identities = 401/440 (91%), Gaps = 1/440 (0%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 76 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 135
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||
Sbjct: 136 gcaccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtct-ccgcatcgtcgcca 194
Query: 737 gcgtagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacg 796
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 195 acgtcgtgcccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacg 254
Query: 797 acggcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 856
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acgacgacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 314
Query: 857 tgcacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacat 916
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 315 tccacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacct 374
Query: 917 ccaacatgcccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccg 976
|||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 375 ccaagatgcccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccg 434
Query: 977 actgcgccgtcgcacgcttcggcggacgccgacaccagcaagccaccgccgctaatattg 1036
|||| ||||||||||| || |||| | || ||||| || |||||| ||||||||
Sbjct: 435 actgtgccgtcgcacgatttcgcggcggacgccaccaagccgcgcccgccgttaatattg 494
Query: 1037 ccatgctcaccgacgacgac 1056
||||| ||||||||||||||
Sbjct: 495 ccatggtcaccgacgacgac 514
>gb|CD227701.1|CD227701 CCC1_53_E01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_E01_A007 3', mRNA sequence
Length = 594
Score = 553 bits (279), Expect = e-155
Identities = 390/427 (91%)
Strand = Plus / Plus
Query: 630 cggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcacccgcaccgcgcgcgt 689
|||||| |||||||| |||||||| || || || ||||||||||||||||||||||||||
Sbjct: 1 cggcgcccgctggtcaccgcccacagctcccgccctgtccgtcacccgcaccgcgcgcgt 60
Query: 690 caacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgccagcgtagtgcccat 749
||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||
Sbjct: 61 caacaccgtcgtcgtcgagctcaggggcgtcttccgcatcgtcgccaacgtcgtgcccat 120
Query: 750 caccgccgaggactcgcggatccacaactacggcgtcagggaggacgacggcgacaccct 809
||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||
Sbjct: 121 caccgccgaggactccaggatccacaactacggcgtcaccgaggacgacgacgacagcct 180
Query: 810 cgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgcacggcgtgct 869
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 181 cgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtccacggcgtgct 240
Query: 870 gggccagacctaccgcccggactacgtcaacagcctcaacgtcacatccaacatgcccgt 929
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 241 gggccagacctaccgcccggactacgtcaacagcctcaacgtcacctccaagatgcccgt 300
Query: 930 catgggaggcgcgccggactacctctcctccgacctcttctccaccgactgcgccgtcgc 989
|||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 301 catgggcggcgcgccaaactacctctcctccgacctcttctccaccgactgtgccgtcgc 360
Query: 990 acgcttcggcggacgccgacaccagcaagccaccgccgctaatattgccatgctcaccga 1049
||| || |||| | || ||||| || |||||| ||||||||||||| |||||||
Sbjct: 361 acgatttcgcggcggacgccaccaagccgcgcccgccgttaatattgccatggtcaccga 420
Query: 1050 cgacgac 1056
|||||||
Sbjct: 421 cgacgac 427
>gb|CD225005.1|CD225005 CCC1_37_F06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_F06_A007 5', mRNA sequence
Length = 553
Score = 549 bits (277), Expect = e-154
Identities = 328/345 (95%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 208 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 267
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 268 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 327
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 328 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 387
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 388 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 447
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 448 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctgaatccag 507
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcc 534
||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 508 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgcc 552
>gb|CD227802.1|CD227802 CCC1_53_C05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_C05_A007 5', mRNA sequence
Length = 604
Score = 549 bits (277), Expect = e-154
Identities = 328/345 (95%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 204 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 263
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 264 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 323
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 324 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 383
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 384 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 443
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 444 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggacccag 503
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcc 534
||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgcc 548
>gb|CD223344.1|CD223344 CCC1_27_G12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_27_G12_A007 5', mRNA sequence
Length = 678
Score = 547 bits (276), Expect = e-154
Identities = 372/404 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 214 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 273
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||
Sbjct: 274 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtacgac 333
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 334 ttctaccccggcgtgtcctgcggcgacccacgcttcgcaggcgccgacggcaacaacttc 393
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 394 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 453
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 513
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagaggacgcccagg 549
||||| |||||||||||||||||||||||||||||||||| |||| | ||| |||| |
Sbjct: 514 gcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaagacccccaag 573
Query: 550 tgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 574 tggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 617
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccac 653
||||||||||||||||||| |||||||| ||||||||
Sbjct: 632 tgccgcgcttcgtcggcgcccgctggtcaccgcccac 668
>gb|CD223966.1|CD223966 CCC1_31_H11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_H11_A007 3', mRNA sequence
Length = 588
Score = 541 bits (273), Expect = e-152
Identities = 387/425 (91%)
Strand = Plus / Plus
Query: 632 gcgcgcgctggtccccgcccacggcgccggcgctgtccgtcacccgcaccgcgcgcgtca 691
|||| |||||||| |||||||| || || || ||||||||||||||||||||||||||||
Sbjct: 1 gcgcccgctggtcaccgcccacagctcccgccctgtccgtcacccgcaccgcgcgcgtca 60
Query: 692 acaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgccagcgtagtgcccatca 751
||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 61 acaccgtcgtcgtcgagctcaggggcgtcttccgcatcgtcgccaacgtcgtgcccatca 120
Query: 752 ccgccgaggactcgcggatccacaactacggcgtcagggaggacgacggcgacaccctcg 811
|| |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||
Sbjct: 121 ccaccgaggactccaggatccacaactacggcgtcaccgaggacgacgacgacagcctcg 180
Query: 812 cgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgcacggcgtgctgg 871
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 cgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtccacggcgtgctgg 240
Query: 872 gccagacctaccgcccggactacgtcaacagcctcaacgtcacatccaacatgcccgtca 931
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 241 gccagacctaccgcccggactacgtcaacagcctcaacgtcacctccaagatgcccgtca 300
Query: 932 tgggaggcgcgccggactacctctcctccgacctcttctccaccgactgcgccgtcgcac 991
|||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 tgggcggcgcgccaaactacctctcctccgacctcttctccaccgactgtgccgtcgcac 360
Query: 992 gcttcggcggacgccgacaccagcaagccaccgccgctaatattgccatgctcaccgacg 1051
| || |||| | || ||||| || |||||| ||||||||||||| |||||||||
Sbjct: 361 gatttcgcggcggacgccaccaagccgcgcccgccgttaatattgccatggtcaccgacg 420
Query: 1052 acgac 1056
|||||
Sbjct: 421 acgac 425
>gb|BG487643.1|BG487643 EM1_65_E08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 579
Score = 539 bits (272), Expect = e-151
Identities = 383/420 (91%)
Strand = Plus / Plus
Query: 637 cgctggtccccgcccacggcgccggcgctgtccgtcacccgcaccgcgcgcgtcaacacc 696
|||||||| |||||||| || || || |||||||||||||||||||||||||||||||||
Sbjct: 1 cgctggtcaccgcccacagctcccgccctgtccgtcacccgcaccgcgcgcgtcaacacc 60
Query: 697 gtcgtcgtcgagctcaggggcgccttccgcatcgtcgccagcgtagtgcccatcaccgcc 756
|||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||
Sbjct: 61 gtcgtcatcgagctcaggggcgtcttccgcatcgtcgccaacgtcgtgcccatcaccgcc 120
Query: 757 gaggactcgcggatccacaactacggcgtcagggaggacgacggcgacaccctcgcgcac 816
|||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||
Sbjct: 121 gaggactccaggatccacaactacggcgtcaccgaggacgacgacgacagcctcgcgcac 180
Query: 817 ctcgacctcggcttcaagttctacgacctcaccgacgacgtgcacggcgtgctgggccag 876
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 ctcgacctcggcttcaagttctacgacctcaccgacgacgtccacggcgtgctgggccag 240
Query: 877 acctaccgcccggactacgtcaacagcctcaacgtcacatccaacatgcccgtcatggga 936
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 241 acctaccgcccggactacgtcaacagcctcaacgtcacctccaagatgcccgtcatgggc 300
Query: 937 ggcgcgccggactacctctcctccgacctcttctccaccgactgcgccgtcgcacgcttc 996
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 301 ggcgcgccaaactacctctcctccgacctcttctccaccgactgtgccgtcgcacgattt 360
Query: 997 ggcggacgccgacaccagcaagccaccgccgctaatattgccatgctcaccgacgacgac 1056
|||| | || ||||| || |||||| ||||||||||||| ||||||||||||||
Sbjct: 361 cgcggcggacgccaccaagccgcgcccgccgttaatattgccatggtcaccgacgacgac 420
>gb|CD229676.1|CD229676 CCC1_18_F05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_18_F05_A007 5', mRNA sequence
Length = 549
Score = 539 bits (272), Expect = e-151
Identities = 320/336 (95%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 214 actctcaagtgcaccaacaccaaggacaacaagaccacctgcagcgccacctgcaacaag 273
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 274 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 333
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 334 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 393
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 394 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 453
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccag 513
Query: 490 gcgctgggcatccgcttcgcgcaccaccacctctac 525
||||| ||||||||||||||||||||||||||||||
Sbjct: 514 gcgctcggcatccgcttcgcgcaccaccacctctac 549
>gb|CD219479.1|CD219479 CCC1_57_E11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_57_E11_A007 3', mRNA sequence
Length = 626
Score = 533 bits (269), Expect = e-149
Identities = 362/393 (92%)
Strand = Plus / Plus
Query: 664 ctgtccgtcacccgcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 8 ctgtccgtcacccgcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgtcttc 67
Query: 724 cgcatcgtcgccagcgtagtgcccatcaccgccgaggactcgcggatccacaactacggc 783
||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 68 cgcatcgtcgccaacgtcgtgcccatcaccgccgaggactccaggatccacaactacggc 127
Query: 784 gtcagggaggacgacggcgacaccctcgcgcacctcgacctcggcttcaagttctacgac 843
|||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 128 gtcaccgaggacgacgacgacagcctcgcgcacctcgacctcggcttcaagttctacgac 187
Query: 844 ctcaccgacgacgtgcacggcgtgctgggccagacctaccgcccggactacgtcaacagc 903
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ctcaccgacgacgtccacggcgtgctgggccagacctaccgcccggactacgtcaacagc 247
Query: 904 ctcaacgtcacatccaacatgcccgtcatgggaggcgcgccggactacctctcctccgac 963
||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct: 248 ctcaacgtcacctccaagatgcccgtcatgggcggcgcgccaaactacctctcctccgac 307
Query: 964 ctcttctccaccgactgcgccgtcgcacgcttcggcggacgccgacaccagcaagccacc 1023
||||||||||||||||| ||||||||||| || |||| | || ||||| || ||
Sbjct: 308 ctcttctccaccgactgtgccgtcgcacgatttcgcggcggacgccaccaagccgcgccc 367
Query: 1024 gccgctaatattgccatgctcaccgacgacgac 1056
|||| ||||||||||||| ||||||||||||||
Sbjct: 368 gccgttaatattgccatggtcaccgacgacgac 400
>gb|CD227695.1|CD227695 CCC1_53_E04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_E04_A007 3', mRNA sequence
Length = 632
Score = 529 bits (267), Expect = e-148
Identities = 375/411 (91%)
Strand = Plus / Plus
Query: 646 ccgcccacggcgccggcgctgtccgtcacccgcaccgcgcgcgtcaacaccgtcgtcgtc 705
|||||||| || || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcccacagctcccgccctgtccgtcacccgcaccgcgcgcgtcaacaccgtcgtcgtc 60
Query: 706 gagctcaggggcgccttccgcatcgtcgccagcgtagtgcccatcaccgccgaggactcg 765
||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 61 gagctcaggggcgtcttccgcatcgtcgccaacgtcgtgcccatcaccgccgaggactcc 120
Query: 766 cggatccacaactacggcgtcagggaggacgacggcgacaccctcgcgcacctcgacctc 825
||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 121 aggatccacaactacggcgtcaccgaggacgacgacgacagcctcgcgcacctcgacctc 180
Query: 826 ggcttcaagttctacgacctcaccgacgacgtgcacggcgtgctgggccagacctaccgc 885
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 ggcttcaagttctacgacctcaccgacgacgtccacggcgtgctgggccagacctaccgc 240
Query: 886 ccggactacgtcaacagcctcaacgtcacatccaacatgcccgtcatgggaggcgcgccg 945
||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||
Sbjct: 241 ccggactacgtcaacagcctcaacgtcacctccaagatgcccgttatgggcggcgcgcca 300
Query: 946 gactacctctcctccgacctcttctccaccgactgcgccgtcgcacgcttcggcggacgc 1005
|||||||||||||||||||||||||||||||||| ||||||||||| || |||| |
Sbjct: 301 aactacctctcctccgacctcttctccaccgactgtgccgtcgcacgatttcgcggcgga 360
Query: 1006 cgacaccagcaagccaccgccgctaatattgccatgctcaccgacgacgac 1056
|| ||||| || |||||| ||||||||||||| ||||||||||||||
Sbjct: 361 cgccaccaagccgcgcccgccgttaatattgccatggtcaccgacgacgac 411
>gb|CW265262.1|CW265262 104_734_11231767_116_35257_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231767, DNA
sequence
Length = 662
Score = 492 bits (248), Expect = e-137
Identities = 308/328 (93%)
Strand = Plus / Minus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 330 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 271
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 270 gcaccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtcttccgcatcgtcgcca 211
Query: 737 gcgtagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacg 796
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 210 acgtcgtgcccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacg 151
Query: 797 acggcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 856
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 acgacgacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacg 91
Query: 857 tgcacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacat 916
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 90 tccacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacct 31
Query: 917 ccaacatgcccgtcatgggaggcgcgcc 944
|||| |||||||||||||| ||||||||
Sbjct: 30 ccaagatgcccgtcatgggcggcgcgcc 3
Score = 404 bits (204), Expect = e-111
Identities = 270/292 (92%)
Strand = Plus / Minus
Query: 302 tgtgcgacttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggca 361
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 636 tgtgcgacttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggca 577
Query: 362 acaacttctacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccc 421
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||
Sbjct: 576 acaacttctacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacc 517
Query: 422 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacct 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacct 457
Query: 482 ggatccaggcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagagga 541
||||||||||||| |||||||||||||||||||||||||||||||||| |||| | ||
Sbjct: 456 ggatccaggcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaaga 397
Query: 542 cgcccaggtgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
| |||| |||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 396 cccccaagtggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 345
>gb|CF432714.1|CF432714 NIT1_18_G04.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_18_G04_A002 5', mRNA sequence
Length = 636
Score = 470 bits (237), Expect = e-130
Identities = 309/333 (92%)
Strand = Plus / Plus
Query: 261 caagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgacttctatcccgg 320
||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 218 caagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgacttctaccccgg 277
Query: 321 cgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttctacttccacgg 380
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 278 cgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttctacttccacgg 337
Query: 381 caagaaggaccgggacttctgcatcgtctccgacgccgccctccacatcaacgcgcactt 440
||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 338 caacaaggacaaggacttctgcatcgtctccgacgccgacctccacatcaacgcgcactt 397
Query: 441 catcggcaagcgcaacccggccatgagccgcgacttcacctggatccaggcgctgggcat 500
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 398 catcggcaagcgcaacccggccatgagccgcgacttcacctggatccaggcgctcggcat 457
Query: 501 ccgcttcgcgcaccaccacctctacgtcgccgcccagaggacgcccaggtgggacgccgc 560
||||||||||||||||||||||||||||| |||| | ||| |||| |||| || ||
Sbjct: 458 ccgcttcgcgcaccaccacctctacgtcggcgccgccaagacccccaagtggaacagcga 517
Query: 561 cgccgaccacctggcgctggccctcgacgacga 593
|| ||||||||| ||||| ||| ||||||||||
Sbjct: 518 cgtcgaccacctcgcgctcgccttcgacgacga 550
Score = 95.6 bits (48), Expect = 9e-018
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 565 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 624
Query: 677 gcaccgcgcgcg 688
||||||||||||
Sbjct: 625 gcaccgcgcgcg 636
>gb|BG487479.1|BG487479 EM1_65_E08.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 485
Score = 464 bits (234), Expect = e-129
Identities = 276/290 (95%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 196 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 255
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 256 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 315
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 316 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 375
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 376 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 435
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcac 479
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcac 485
>gb|CD228642.1|CD228642 CCC1_8_A01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_A01_A007 5', mRNA sequence
Length = 490
Score = 434 bits (219), Expect = e-120
Identities = 261/275 (94%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 216 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 275
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 276 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 335
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 336 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 395
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 396 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 455
Query: 430 aacgcgcacttcatcggcaagcgcaacccggccat 464
|||||||||||||||||||||||||||||||||||
Sbjct: 456 aacgcgcacttcatcggcaagcgcaacccggccat 490
>gb|CN127915.1|CN127915 RHOH1_25_H02.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_25_H02_A002 5', mRNA sequence
Length = 640
Score = 424 bits (214), Expect = e-117
Identities = 283/306 (92%)
Strand = Plus / Plus
Query: 288 caagacattctgcttgtgcgacttctatcccggcgtgtcctgcggcgacccacgcttcac 347
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 166 caagactttctgcttgtgcgacttctaccccggcgtgtcctgcggcgacccacgcttcac 225
Query: 348 gggcgccgacggcaacaacttctacttccacggcaagaaggaccgggacttctgcatcgt 407
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 226 aggcgccgacggcaacaacttctacttccacggcaacaaggacaaggacttctgcatcgt 285
Query: 408 ctccgacgccgccctccacatcaacgcgcacttcatcggcaagcgcaacccggccatgag 467
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctccgacgccgacctccacatcaacgcgcacttcatcggcaagcgcaacccggccatgag 345
Query: 468 ccgcgacttcacctggatccaggcgctgggcatccgcttcgcgcaccaccacctctacgt 527
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 346 ccgcgacttcacctggatccaggcgctcggcatccgcttcgcgcaccaccacctctacgt 405
Query: 528 cgccgcccagaggacgcccaggtgggacgccgccgccgaccacctggcgctggccctcga 587
|| |||| | ||| |||| |||| || || || ||||||||| ||||| ||| ||||
Sbjct: 406 cggcgccgccaagacccccaagtggaacagcgacgtcgaccacctcgcgctcgccttcga 465
Query: 588 cgacga 593
||||||
Sbjct: 466 cgacga 471
Score = 214 bits (108), Expect = 1e-053
Identities = 138/148 (93%)
Strand = Plus / Plus
Query: 617 tgccgcgcttcgtcggcgcgcgctggtccccgcccacggcgccggcgctgtccgtcaccc 676
||||||||||||||||||| |||||||| |||||||| || || || |||||||||||||
Sbjct: 486 tgccgcgcttcgtcggcgcccgctggtcaccgcccacagctcccgccctgtccgtcaccc 545
Query: 677 gcaccgcgcgcgtcaacaccgtcgtcgtcgagctcaggggcgccttccgcatcgtcgcca 736
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 546 gcaccgcgcgcgtcaacaccgtcgtcatcgagctcaggggcgtcttccgcatcgtcgcca 605
Query: 737 gcgtagtgcccatcaccgccgaggactc 764
||| |||||||||||||||||||||||
Sbjct: 606 acgtcgtgcccatcaccgccgaggactc 633
Score = 54.0 bits (27), Expect = 3e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagac 224
||||||||||||||||||| ||||| |||||||||
Sbjct: 137 actctcaagtgcaccaacaccaagaacaacaagac 171
>gb|CW245586.1|CW245586 104_706_11221046_116_37600_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221046, DNA
sequence
Length = 680
Score = 404 bits (204), Expect = e-111
Identities = 270/292 (92%)
Strand = Plus / Plus
Query: 302 tgtgcgacttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggca 361
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 364 tgtgcgacttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggca 423
Query: 362 acaacttctacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccc 421
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||
Sbjct: 424 acaacttctacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacc 483
Query: 422 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacct 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacct 543
Query: 482 ggatccaggcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcccagagga 541
||||||||||||| |||||||||||||||||||||||||||||||||| |||| | ||
Sbjct: 544 ggatccaggcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccgccaaga 603
Query: 542 cgcccaggtgggacgccgccgccgaccacctggcgctggccctcgacgacga 593
| |||| |||| || || || ||||||||| ||||| ||| ||||||||||
Sbjct: 604 cccccaagtggaacagcgacgtcgaccacctcgcgctcgccttcgacgacga 655
Score = 159 bits (80), Expect = 7e-037
Identities = 104/112 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 166 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 225
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgct 301
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 226 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgct 277
>gb|CD226775.1|CD226775 CCC1_48_H08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_48_H08_A007 3', mRNA sequence
Length = 552
Score = 402 bits (203), Expect = e-110
Identities = 287/315 (91%)
Strand = Plus / Plus
Query: 742 gtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacgacggc 801
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |
Sbjct: 12 gtgcccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacgacgac 71
Query: 802 gacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgcac 861
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 72 gacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtccac 131
Query: 862 ggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacatccaac 921
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 132 ggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacctccaag 191
Query: 922 atgcccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccgactgc 981
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 192 atgcccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccgactgt 251
Query: 982 gccgtcgcacgcttcggcggacgccgacaccagcaagccaccgccgctaatattgccatg 1041
||||||||||| || |||| | || ||||| || |||||| |||||||||||||
Sbjct: 252 gccgtcgcacgatttcgcggcggacgccaccaagccgcgcccgccgttaatattgccatg 311
Query: 1042 ctcaccgacgacgac 1056
||||||||||||||
Sbjct: 312 gtcaccgacgacgac 326
>gb|CW245585.1|CW245585 104_706_11221046_116_35081_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221046, DNA
sequence
Length = 690
Score = 400 bits (202), Expect = e-109
Identities = 226/234 (96%)
Strand = Plus / Plus
Query: 302 tgtgcgacttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggca 361
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 364 tgtgcgacttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggca 423
Query: 362 acaacttctacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccc 421
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||
Sbjct: 424 acaacttctacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacc 483
Query: 422 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacct 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacct 543
Query: 482 ggatccaggcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgccc 535
||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 544 ggatccaggcgctcggcatccgcttcgcgcaccaccacctctacgtcggcgccc 597
Score = 159 bits (80), Expect = 7e-037
Identities = 104/112 (92%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 166 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 225
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgct 301
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 226 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgct 277
>gb|CD224897.1|CD224897 CCC1_37_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_F06_A007 3', mRNA sequence
Length = 493
Score = 400 bits (202), Expect = e-109
Identities = 295/326 (90%)
Strand = Plus / Plus
Query: 731 tcgccagcgtagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcaggg 790
|||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||| |
Sbjct: 1 tcgccaacgtcgtgcccatcaccaccgaggactccaggatccacaactacggcgtcaccg 60
Query: 791 aggacgacggcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccg 850
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggacgacgacgacagcctcgcgcacctcgacctcggcttcaagttctacgacctcaccg 120
Query: 851 acgacgtgcacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacg 910
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgacgtccacggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacg 180
Query: 911 tcacatccaacatgcccgtcatgggaggcgcgccggactacctctcctccgacctcttct 970
|||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 181 tcacctccaagatgcccgtcatgggcggcgcgccaaactacctctcctccgacctcttct 240
Query: 971 ccaccgactgcgccgtcgcacgcttcggcggacgccgacaccagcaagccaccgccgcta 1030
|||||||||| ||||||||||| || |||| | || ||||| || |||||| ||
Sbjct: 241 ccaccgactgtgccgtcgcacgatttcgcggcggacgccaccaagccgcgcccgccgtta 300
Query: 1031 atattgccatgctcaccgacgacgac 1056
||||||||||| ||||||||||||||
Sbjct: 301 atattgccatggtcaccgacgacgac 326
>gb|CN126295.1|CN126295 RHOH1_16_G06.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_16_G06_A002 3', mRNA sequence
Length = 780
Score = 396 bits (200), Expect = e-108
Identities = 284/312 (91%)
Strand = Plus / Plus
Query: 745 cccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacgacggcgac 804
|||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||
Sbjct: 261 cccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacgacgacgac 320
Query: 805 accctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgcacggc 864
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 agcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtccacggc 380
Query: 865 gtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacatccaacatg 924
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 381 gtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacctccaagatg 440
Query: 925 cccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccgactgcgcc 984
||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 441 cccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccgactgtgcc 500
Query: 985 gtcgcacgcttcggcggacgccgacaccagcaagccaccgccgctaatattgccatgctc 1044
|||||||| || |||| | || ||||| || |||||| ||||||||||||| ||
Sbjct: 501 gtcgcacgatttcgcggcggacgccaccaagccgcgcccgccgttaatattgccatggtc 560
Query: 1045 accgacgacgac 1056
||||||||||||
Sbjct: 561 accgacgacgac 572
Score = 351 bits (177), Expect = 1e-094
Identities = 222/237 (93%)
Strand = Plus / Plus
Query: 194 tcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgcacgct 253
||||||||||||||| ||||| ||||||||||||||||||||||||||||||| || |
Sbjct: 31 tcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaagcgat 90
Query: 254 gccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgacttct 313
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 91 gccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgacttct 150
Query: 314 atcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttctact 373
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 151 accccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttctact 210
Query: 374 tccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatca 430
|||||||||| |||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct: 211 tccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccccatca 267
>gb|CN126384.1|CN126384 RHOH1_16_G06.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_16_G06_A002 5', mRNA sequence
Length = 801
Score = 396 bits (200), Expect = e-108
Identities = 284/312 (91%)
Strand = Plus / Plus
Query: 745 cccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacgacggcgac 804
|||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||
Sbjct: 415 cccatcaccgccgaggactccaggatccacaactacggcgtcaccgaggacgacgacgac 474
Query: 805 accctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgcacggc 864
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 475 agcctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtccacggc 534
Query: 865 gtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacatccaacatg 924
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 535 gtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacctccaagatg 594
Query: 925 cccgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccgactgcgcc 984
||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 595 cccgtcatgggcggcgcgccaaactacctctcctccgacctcttctccaccgactgtgcc 654
Query: 985 gtcgcacgcttcggcggacgccgacaccagcaagccaccgccgctaatattgccatgctc 1044
|||||||| || |||| | || ||||| || |||||| ||||||||||||| ||
Sbjct: 655 gtcgcacgatttcgcggcggacgccaccaagccgcgcccgccgttaatattgccatggtc 714
Query: 1045 accgacgacgac 1056
||||||||||||
Sbjct: 715 accgacgacgac 726
Score = 359 bits (181), Expect = 4e-097
Identities = 226/241 (93%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 181 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 240
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 241 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 300
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 360
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct: 361 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccccatc 420
Query: 430 a 430
|
Sbjct: 421 a 421
>gb|CF430946.1|CF430946 NIT1_1_H06.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_1_H06_A002 5', mRNA sequence
Length = 443
Score = 373 bits (188), Expect = e-101
Identities = 230/244 (94%)
Strand = Plus / Plus
Query: 190 actctcaagtgcaccaacatcaagagcaacaagaccacctgcagcgccacctgcaacgca 249
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 200 actctcaagtgcaccaacaccaagaacaacaagaccacctgcagcgccacctgcaacaag 259
Query: 250 cgctgccctcacaagtgcctcatccagtgcccaagctgcaagacattctgcttgtgcgac 309
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 260 cgatgccctcacaagtgcctcatccagtgccccagctgcaagactttctgcttgtgcgac 319
Query: 310 ttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttc 369
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 320 ttctaccccggcgtgtcctgcggcgacccacgcttcacaggcgccgacggcaacaacttc 379
Query: 370 tacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatc 429
|||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 380 tacttccacggcaacaaggacaaggacttctgcatcgtctccgacgccgacctccacatc 439
Query: 430 aacg 433
||||
Sbjct: 440 aacg 443
>gb|CF428909.1|CF428909 PH1_18_E02.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_18_E02_A002 5', mRNA sequence
Length = 643
Score = 331 bits (167), Expect = 9e-089
Identities = 209/223 (93%)
Strand = Plus / Plus
Query: 286 tgcaagacattctgcttgtgcgacttctatcccggcgtgtcctgcggcgacccacgcttc 345
||||||||||||||| |||| |||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 330 tgcaagacattctgcatgtgtgacttctaccccggcgtgtcctgcggtgacccgcgcttc 389
Query: 346 acgggcgccgacggcaacaacttctacttccacggcaagaaggaccgggacttctgcatc 405
|| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 390 accggcggcgacggcaacaacttctacttccacggcaagaaggacggggacttctgcatc 449
Query: 406 gtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcgcaacccggccatg 465
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctctccgacgccaacctccacatcaacgcgcacttcatcggcaagcgcaacccggccatg 509
Query: 466 agccgcgacttcacctggatccaggcgctgggcatccgcttcg 508
|||||||||||||| |||||||||||| | |||||||||||||
Sbjct: 510 agccgcgacttcacgtggatccaggcggtcggcatccgcttcg 552
>gb|CW251968.1|CW251968 104_714_11224234_116_35067_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224234, DNA
sequence
Length = 747
Score = 307 bits (155), Expect = 1e-081
Identities = 194/207 (93%)
Strand = Plus / Plus
Query: 302 tgtgcgacttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggca 361
|||| |||||||| ||||||||||||||||| ||||| |||||||| |||| ||||||||
Sbjct: 123 tgtgtgacttctaccccggcgtgtcctgcggtgacccgcgcttcaccggcggcgacggca 182
Query: 362 acaacttctacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccc 421
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 183 acaacttctacttccacggcaagaaggacggggacttctgcatcctctccgacgccaacc 242
Query: 422 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacct 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 243 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacgt 302
Query: 482 ggatccaggcgctgggcatccgcttcg 508
||||||||||| | |||||||||||||
Sbjct: 303 ggatccaggcggtcggcatccgcttcg 329
Score = 137 bits (69), Expect = 3e-030
Identities = 186/224 (83%), Gaps = 7/224 (3%)
Strand = Plus / Plus
Query: 707 agctcaggggcgccttccgcatcgtcgccagcgtagtgcccatcaccgccgaggactcgc 766
|||||||||||| ||| ||||||||||| ||| |||||||||| || ||||||||||
Sbjct: 531 agctcaggggcgtgttcgacatcgtcgccaacgtggtgcccatcagcgaggaggactcgc 590
Query: 767 ggatccacaactacggcgtcagggaggacgacggcgacaccctcgcgcacctcgacctcg 826
| |||||||||||||||| | ||||||||| || ||||||||| |||||||||
Sbjct: 591 gcgtccacaactacggcgtgaccgaggacgacagc------ctcgcgcacttcgacctcg 644
Query: 827 gcttcaagttctacgacctcaccgacgacgtgcacggcgtgctgggccagacctaccgcc 886
| ||||||| || ||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 645 ggttcaagt-cttcgacctcaccgacgacgtgcatggcgtcctcggccagacctaccgcg 703
Query: 887 cggactacgtcaacagcctcaacgtcacatccaacatgcccgtc 930
| |||||| ||||| |||| ||||| ||||| |||||||||
Sbjct: 704 ccgactacatcaaccagctcagcgtcagctccaagatgcccgtc 747
>gb|CW490208.1|CW490208 fsbb001f275i13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f275i13, DNA
sequence
Length = 708
Score = 307 bits (155), Expect = 1e-081
Identities = 194/207 (93%)
Strand = Plus / Plus
Query: 302 tgtgcgacttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggca 361
|||| |||||||| ||||||||||||||||| ||||| |||||||| |||| ||||||||
Sbjct: 96 tgtgtgacttctaccccggcgtgtcctgcggtgacccgcgcttcaccggcggcgacggca 155
Query: 362 acaacttctacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccc 421
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 156 acaacttctacttccacggcaagaaggacggggacttctgcatcctctccgacgccaacc 215
Query: 422 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacct 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 216 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacgt 275
Query: 482 ggatccaggcgctgggcatccgcttcg 508
||||||||||| | |||||||||||||
Sbjct: 276 ggatccaggcggtcggcatccgcttcg 302
Score = 149 bits (75), Expect = 7e-034
Identities = 164/194 (84%), Gaps = 6/194 (3%)
Strand = Plus / Plus
Query: 707 agctcaggggcgccttccgcatcgtcgccagcgtagtgcccatcaccgccgaggactcgc 766
|||||||||||| ||| ||||||||||| ||| |||||||||| || ||||||||||
Sbjct: 504 agctcaggggcgtgttcgacatcgtcgccaacgtggtgcccatcagcgaggaggactcgc 563
Query: 767 ggatccacaactacggcgtcagggaggacgacggcgacaccctcgcgcacctcgacctcg 826
| |||||||||||||||| | ||||||||| || ||||||||| |||||||||
Sbjct: 564 gcgtccacaactacggcgtgaccgaggacgacagc------ctcgcgcacttcgacctcg 617
Query: 827 gcttcaagttctacgacctcaccgacgacgtgcacggcgtgctgggccagacctaccgcc 886
| |||||||||| ||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 618 ggttcaagttcttcgacctcaccgacgacgtgcatggcgtcctcggccagacctaccgcg 677
Query: 887 cggactacgtcaac 900
| |||||| |||||
Sbjct: 678 ccgactacatcaac 691
>gb|CW072243.1|CW072243 104_325_10592151_116_30541 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592151, DNA
sequence
Length = 636
Score = 295 bits (149), Expect = 5e-078
Identities = 182/193 (94%)
Strand = Plus / Plus
Query: 316 cccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaacaacttctacttc 375
||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||
Sbjct: 1 cccggcgtgtcctgcggtgacccgcgcttcaccggcggcgacggcaacaacttctacttc 60
Query: 376 cacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctccacatcaacgcg 435
||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 61 cacggcaagaaggacggggacttctgcatcctctccgacgccaacctccacatcaacgcg 120
Query: 436 cacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccaggcgctg 495
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 121 cacttcatcggcaagcgcaacccggccatgagccgcgacttcacgtggatccaggcggtc 180
Query: 496 ggcatccgcttcg 508
|||||||||||||
Sbjct: 181 ggcatccgcttcg 193
Score = 165 bits (83), Expect = 1e-038
Identities = 199/238 (83%), Gaps = 6/238 (2%)
Strand = Plus / Plus
Query: 707 agctcaggggcgccttccgcatcgtcgccagcgtagtgcccatcaccgccgaggactcgc 766
|||||||||||| ||| ||||||||||| ||| |||||||||| || ||||||||||
Sbjct: 395 agctcaggggcgtgttcgacatcgtcgccaacgtggtgcccatcagcgaggaggactcgc 454
Query: 767 ggatccacaactacggcgtcagggaggacgacggcgacaccctcgcgcacctcgacctcg 826
| |||||||||||||||| | ||||||||| || ||||||||| |||||||||
Sbjct: 455 gcgtccacaactacggcgtgaccgaggacgacagc------ctcgcgcacttcgacctcg 508
Query: 827 gcttcaagttctacgacctcaccgacgacgtgcacggcgtgctgggccagacctaccgcc 886
| |||||||||| ||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 509 ggttcaagttcttcgacctcaccgacgacgtgcatggcgtcctcggccagacctaccgcg 568
Query: 887 cggactacgtcaacagcctcaacgtcacatccaacatgcccgtcatgggaggcgcgcc 944
| |||||| ||||| |||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 569 ccgactacatcaaccagctcagcgtcagctccaagatgcccgtcatgggtggggcgcc 626
>gb|CW241279.1|CW241279 104_700_11218680_148_37541_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218680, DNA
sequence
Length = 497
Score = 289 bits (146), Expect = 3e-076
Identities = 179/190 (94%)
Strand = Plus / Minus
Query: 302 tgtgcgacttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggca 361
|||| |||||||| ||||||||||||||||| ||||| |||||||| |||| ||||||||
Sbjct: 190 tgtgtgacttctaccccggcgtgtcctgcggtgacccgcgcttcaccggcggcgacggca 131
Query: 362 acaacttctacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccc 421
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 130 acaacttctacttccacggcaagaaggacggggacttctgcatcctctccgacgccaacc 71
Query: 422 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacct 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 70 tccacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacgt 11
Query: 482 ggatccaggc 491
||||||||||
Sbjct: 10 ggatccaggc 1
>gb|CW257668.1|CW257668 104_723_11227460_148_35155_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227460, DNA
sequence
Length = 565
Score = 285 bits (144), Expect = 5e-075
Identities = 260/296 (87%), Gaps = 7/296 (2%)
Strand = Plus / Plus
Query: 302 tgtgcgacttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggca 361
||||||||||||| ||||||||||| ||||||||||| || | |||||||||||||||||
Sbjct: 12 tgtgcgacttctaccccggcgtgtcgtgcggcgacccgcggtacacgggcgccgacggca 71
Query: 362 acaacttctacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccc 421
||| |||||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||
Sbjct: 72 acaccttctacttccacggcaaaaaggaccaggacttctgcatcgtcaccgacgccggcc 131
Query: 422 tccacatcaacgcgcacttcatcggcaagcgcaacc----cggccatgagccgcgacttc 477
|||||||||||||||||||||||||||| | ||||| |||||| | ||||||||||
Sbjct: 132 tccacatcaacgcgcacttcatcggcaaccacaaccgggccggccaccaaccgcgacttc 191
Query: 478 acctggatccaggcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcc-ca 536
|| |||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
Sbjct: 192 acgtggatccaggcgctgggcatccatttcgcgcaccacagcctctacgtcggcgccgcc 251
Query: 537 gaggacgc--ccaggtgggacgccgccgccgaccacctggcgctggccctcgacga 590
| |||| ||| ||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 252 gccaacgctgccaagtgggacgccgccgccgaccacctggccctcgccttcgacga 307
Score = 113 bits (57), Expect = 4e-023
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 655 gcgccggcgctgtccgtcacccgcaccgcgcgcgtcaacaccgtcgtcgtcgagctcagg 714
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||
Sbjct: 366 gcgccggcgctgtccgtcacccgcaccgcgcgcgccaacgccgtcgtcgtcgagctccgg 425
Query: 715 ggcgccttccgcatcgt 731
|||| ||||||| ||||
Sbjct: 426 ggcgtcttccgcgtcgt 442
Score = 109 bits (55), Expect = 6e-022
Identities = 115/133 (86%), Gaps = 4/133 (3%)
Strand = Plus / Plus
Query: 737 gcgtagtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacg 796
|||| |||||||||||||||||||||||||| |||| || ||||||| ||||||||
Sbjct: 436 gcgtcgtgcccatcaccgccgaggactcgcgcgtccatggatatggcgtcacggaggacg 495
Query: 797 acggcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccg-acgac 855
|| || | |||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 496 actgccgc---ctcgcgcacctcgacctcgggttcaagttctacgacctcaccgaacgac 552
Query: 856 gtgcacggcgtgc 868
|| ||||||||||
Sbjct: 553 gtccacggcgtgc 565
>gb|CL150226.1|CL150226 104_331_10778370_114_31355_306 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778370, DNA
sequence
Length = 536
Score = 278 bits (140), Expect = 1e-072
Identities = 259/296 (87%), Gaps = 7/296 (2%)
Strand = Plus / Plus
Query: 302 tgtgcgacttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggca 361
||||||||||||| ||||||||||| ||||||||||| || | |||||||||||||||||
Sbjct: 36 tgtgcgacttctaccccggcgtgtcgtgcggcgacccgcggtacacgggcgccgacggca 95
Query: 362 acaacttctacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccc 421
||| |||||||||||||||||| | ||||| |||||||||||||||| ||||||||| ||
Sbjct: 96 acaccttctacttccacggcaaaatggaccaggacttctgcatcgtcaccgacgccggcc 155
Query: 422 tccacatcaacgcgcacttcatcggcaagcgcaacc----cggccatgagccgcgacttc 477
|||||||||||||||||||||||||||| | ||||| |||||| | ||||||||||
Sbjct: 156 tccacatcaacgcgcacttcatcggcaaccacaaccgggccggccaccaaccgcgacttc 215
Query: 478 acctggatccaggcgctgggcatccgcttcgcgcaccaccacctctacgtcgccgcc-ca 536
|| |||||||||||||||||||||| |||||||||||| ||||||||||| |||| |
Sbjct: 216 acgtggatccaggcgctgggcatccatttcgcgcaccacagcctctacgtcggcgccgcc 275
Query: 537 gaggacgc--ccaggtgggacgccgccgccgaccacctggcgctggccctcgacga 590
| |||| ||| ||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 276 gccaacgctgccaagtgggacgccgccgccgaccacctggccctcgccttcgacga 331
Score = 113 bits (57), Expect = 4e-023
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 655 gcgccggcgctgtccgtcacccgcaccgcgcgcgtcaacaccgtcgtcgtcgagctcagg 714
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||
Sbjct: 390 gcgccggcgctgtccgtcacccgcaccgcgcgcgccaacgccgtcgtcgtcgagctccgg 449
Query: 715 ggcgccttccgcatcgt 731
|||| ||||||| ||||
Sbjct: 450 ggcgtcttccgcgtcgt 466
Score = 54.0 bits (27), Expect = 3e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 737 gcgtagtgcccatcaccgccgaggactcgcg 767
|||| ||||||||||||||||||||||||||
Sbjct: 460 gcgtcgtgcccatcaccgccgaggactcgcg 490
>gb|CW201025.1|CW201025 104_626_11184349_148_36933_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184349, DNA
sequence
Length = 745
Score = 268 bits (135), Expect = 1e-069
Identities = 198/219 (90%)
Strand = Plus / Minus
Query: 304 tgcgacttctatcccggcgtgtcctgcggcgacccacgcttcacgggcgccgacggcaac 363
||||||||||| |||||| |||| ||||||||||| || |||||||||| ||||||||||
Sbjct: 219 tgcgacttctaccccggcatgtcgtgcggcgacccgcggttcacgggcggcgacggcaac 160
Query: 364 aacttctacttccacggcaagaaggaccgggacttctgcatcgtctccgacgccgccctc 423
| |||||||||||||||| ||||||| ||||||||||||| || ||||||||| ||||
Sbjct: 159 accttctacttccacggcggcaaggaccaggacttctgcatcttcaccgacgccggcctc 100
Query: 424 cacatcaacgcgcacttcatcggcaagcgcaacccggccatgagccgcgacttcacctgg 483
|| |||||||||||||||||||| | |||| |||| ||||||||||||||||||||||||
Sbjct: 99 catatcaacgcgcacttcatcgggaggcgcgaccccgccatgagccgcgacttcacctgg 40
Query: 484 atccaggcgctgggcatccgcttcgcgcaccaccacctc 522
||||||||||| |||||||||||||||||||||| ||||
Sbjct: 39 atccaggcgctcggcatccgcttcgcgcaccaccgcctc 1
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 764,810
Number of Sequences: 832831
Number of extensions: 764810
Number of successful extensions: 292092
Number of sequences better than 0.5: 217
Number of HSP's better than 0.5 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 291184
Number of HSP's gapped (non-prelim): 785
length of query: 1225
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1205
effective length of database: 474,703,049
effective search space: 572017174045
effective search space used: 572017174045
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)