BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4679577.2.1
(833 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD227591.1|CD227591 CCC1_52_A02.g1_A007 Callus culture/c... 684 0.0
gb|CD227568.1|CD227568 CCC1_52_A02.b1_A007 Callus culture/c... 670 0.0
gb|CW056944.1|CW056944 104_298_10517953_114_30151 Sorghum m... 620 e-176
gb|CW324492.1|CW324492 104_819_11477191_148_35910_030 Sorgh... 620 e-176
gb|CW363965.1|CW363965 fsbb001f035m22f0 Sorghum methylation... 620 e-176
gb|CW363966.1|CW363966 fsbb001f035m22k0 Sorghum methylation... 452 e-125
gb|CW405242.1|CW405242 fsbb001f097l13f0 Sorghum methylation... 452 e-125
gb|CW425870.1|CW425870 fsbb001f137a05f0 Sorghum methylation... 428 e-118
gb|CW400946.1|CW400946 fsbb001f091i05k0 Sorghum methylation... 418 e-115
gb|CW324491.1|CW324491 104_819_11477191_116_35914_030 Sorgh... 373 e-101
gb|CW046146.1|CW046146 104_283_10509998_114_30137 Sorghum m... 349 3e-094
gb|CW400945.1|CW400945 fsbb001f091i05f0 Sorghum methylation... 349 3e-094
gb|BE357733.1|BE357733 DG1_22_D10.b1_A002 Dark Grown 1 (DG1... 147 2e-033
gb|CW231901.1|CW231901 104_681_11211372_148_37350_042 Sorgh... 141 1e-031
gb|CW285685.1|CW285685 104_763_11410466_148_35506_013 Sorgh... 141 1e-031
gb|CW489486.1|CW489486 fsbb001f274h04f0 Sorghum methylation... 141 1e-031
gb|BG049497.1|BG049497 OV1_20_G04.g1_A002 Ovary 1 (OV1) Sor... 141 1e-031
gb|BG102665.1|BG102665 RHIZ2_35_G08.g1_A003 Rhizome2 (RHIZ2... 141 1e-031
gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (... 139 5e-031
gb|AW746695.1|AW746695 WS1_54_E02.g1_A002 Water-stressed 1 ... 139 5e-031
gb|AW924422.1|AW924422 WS1_69_C06.b1_A002 Water-stressed 1 ... 139 5e-031
gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 ... 139 5e-031
gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sor... 139 5e-031
gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/ce... 139 5e-031
gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/c... 139 5e-031
gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/c... 139 5e-031
gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds 139 5e-031
gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds 139 5e-031
gb|AW922735.1|AW922735 DG1_45_B06.g1_A002 Dark Grown 1 (DG1... 135 7e-030
gb|CW150339.1|CW150339 104_549_11142974_116_36302_051 Sorgh... 133 3e-029
gb|CW150340.1|CW150340 104_549_11142974_148_36301_051 Sorgh... 133 3e-029
gb|CW318996.1|CW318996 104_811_11474252_116_35881_074 Sorgh... 133 3e-029
gb|CW357974.1|CW357974 fsbb001f024n22k0 Sorghum methylation... 133 3e-029
gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1... 133 3e-029
gb|AW924229.1|AW924229 WS1_51_H04.b1_A002 Water-stressed 1 ... 133 3e-029
gb|BE359997.1|BE359997 DG1_60_H07.g2_A002 Dark Grown 1 (DG1... 133 3e-029
gb|BG556500.1|BG556500 EM1_37_H12.g1_A002 Embryo 1 (EM1) So... 133 3e-029
gb|CD220455.1|CD220455 CCC1_67_F06.b1_A007 Callus culture/c... 133 3e-029
gb|CD223269.1|CD223269 CCC1_27_E04.b1_A007 Callus culture/c... 133 3e-029
gb|CD225586.1|CD225586 CCC1_40_H10.b1_A007 Callus culture/c... 133 3e-029
gb|CD226496.1|CD226496 CCC1_46_E08.b1_A007 Callus culture/c... 133 3e-029
gb|CD227859.1|CD227859 CCC1_56_F04.b1_A007 Callus culture/c... 133 3e-029
gb|CD228687.1|CD228687 CCC1_9_D03.b1_A007 Callus culture/ce... 133 3e-029
gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves... 133 3e-029
gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots ... 133 3e-029
gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinol... 133 3e-029
gb|CX613534.1|CX613534 GABR1_8_E12.g1_A002 GA- or brassinol... 133 3e-029
gb|CX616381.1|CX616381 GABR1_27_C09.g1_A002 GA- or brassino... 133 3e-029
gb|CW098317.1|CW098317 104_464_11002941_148_34366_083 Sorgh... 131 1e-028
gb|CD224145.1|CD224145 CCC1_32_A09.b1_A007 Callus culture/c... 131 1e-028
gb|CD225895.1|CD225895 CCC1_42_B03.b1_A007 Callus culture/c... 131 1e-028
gb|CD423411.1|CD423411 SA1_23_C09.b1_A002 Salicylic acid-tr... 131 1e-028
gb|CD464022.1|CD464022 ETH1_48_G10.b1_A002 Ethylene-treated... 131 1e-028
gb|BE363379.1|BE363379 WS1_62_C05.g1_A002 Water-stressed 1 ... 129 4e-028
gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorg... 129 4e-028
gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorg... 129 4e-028
gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stress... 129 4e-028
gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stress... 129 4e-028
gb|CW088904.1|CW088904 104_434_10948392_114_32602_096 Sorgh... 125 7e-027
gb|CD228140.1|CD228140 CCC1_6_E03.b1_A007 Callus culture/ce... 125 7e-027
gb|CN151443.1|CN151443 WOUND1_75_B02.g1_A002 Wounded leaves... 125 7e-027
gb|CX610094.1|CX610094 ANR1_16_C10.g1_A002 Anaerobic roots ... 125 7e-027
gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gen... 125 7e-027
gb|CD220272.1|CD220272 CCC1_66_G11.b1_A007 Callus culture/c... 123 3e-026
gb|CD229267.1|CD229267 CCC1_14_D09.b1_A007 Callus culture/c... 123 3e-026
gb|CD229477.1|CD229477 CCC1_16_C07.b1_A007 Callus culture/c... 123 3e-026
gb|CD423525.1|CD423525 SA1_23_C09.g1_A002 Salicylic acid-tr... 123 3e-026
gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds 123 3e-026
gb|CL160722.1|CL160722 104_351_10805186_116_31825_242 Sorgh... 121 1e-025
gb|CW365833.1|CW365833 fsbb001f038i18k0 Sorghum methylation... 121 1e-025
gb|AW746018.1|AW746018 WS1_38_H11.g1_A002 Water-stressed 1 ... 121 1e-025
gb|CD223155.1|CD223155 CCC1_26_G01.b1_A007 Callus culture/c... 121 1e-025
gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/c... 121 1e-025
gb|CD224094.1|CD224094 CCC1_32_C12.b1_A007 Callus culture/c... 121 1e-025
gb|CD226332.1|CD226332 CCC1_45_F08.b1_A007 Callus culture/c... 121 1e-025
gb|CD226807.1|CD226807 CCC1_48_C11.b1_A007 Callus culture/c... 121 1e-025
gb|CD228493.1|CD228493 CCC1_8_E11.b1_A007 Callus culture/ce... 121 1e-025
gb|CD432114.1|CD432114 ETH1_26_H07.b1_A002 Ethylene-treated... 121 1e-025
gb|CD222930.1|CD222930 CCC1_25_F06.b1_A007 Callus culture/c... 117 2e-024
gb|CN134928.1|CN134928 OX1_29_A10.g1_A002 Oxidatively-stres... 117 2e-024
gb|CW039394.1|CW039394 104_272_10505475_115_30390 Sorghum m... 115 7e-024
gb|CW110423.1|CW110423 104_483_11103696_148_34524_094 Sorgh... 115 7e-024
gb|CW159280.1|CW159280 104_565_11149276_148_36409_010 Sorgh... 115 7e-024
gb|CW204755.1|CW204755 104_632_11186715_116_37060_002 Sorgh... 115 7e-024
gb|CW265114.1|CW265114 104_734_11231683_148_35261_076 Sorgh... 115 7e-024
gb|AW746206.1|AW746206 WS1_40_B10.b1_A002 Water-stressed 1 ... 115 7e-024
gb|BE362915.2|BE362915 DG1_90_E12.g1_A002 Dark Grown 1 (DG1... 115 7e-024
gb|AW745819.1|AW745819 WS1_37_H11.g1_A002 Water-stressed 1 ... 113 3e-023
gb|CD220568.1|CD220568 CCC1_68_B04.b1_A007 Callus culture/c... 113 3e-023
gb|CW069060.1|CW069060 104_318_10525580_1_30095 Sorghum met... 111 1e-022
gb|CW159279.1|CW159279 104_565_11149276_116_36410_010 Sorgh... 111 1e-022
gb|AW678309.1|AW678309 WS1_14_G01.g1_A002 Water-stressed 1 ... 111 1e-022
gb|BE357811.1|BE357811 DG1_22_D10.g1_A002 Dark Grown 1 (DG1... 109 4e-022
gb|CW284180.1|CW284180 104_760_11409637_148_35487_049 Sorgh... 105 6e-021
gb|CW350033.1|CW350033 fsbb001f011c12f0 Sorghum methylation... 105 6e-021
gb|CW445566.1|CW445566 fsbb001f170m12f0 Sorghum methylation... 105 6e-021
gb|CW464036.1|CW464036 fsbb001f213a24k0 Sorghum methylation... 105 6e-021
gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, ... 105 6e-021
gb|CN134927.1|CN134927 OX1_29_A09.g1_A002 Oxidatively-stres... 101 1e-019
gb|CN135214.1|CN135214 OX1_31_G02.b1_A002 Oxidatively-stres... 101 1e-019
gb|CN135290.1|CN135290 OX1_31_G02.g1_A002 Oxidatively-stres... 101 1e-019
gb|CW066077.1|CW066077 104_313_10523499_114_30148 Sorghum m... 100 4e-019
gb|CW117036.1|CW117036 104_493_11107443_148_34610_016 Sorgh... 100 4e-019
gb|CW246023.1|CW246023 104_706_11221179_148_37598_002 Sorgh... 100 4e-019
gb|CW265113.1|CW265113 104_734_11231683_116_35257_076 Sorgh... 100 4e-019
gb|CW275250.1|CW275250 104_748_11404861_148_35382_055 Sorgh... 100 4e-019
gb|CW448428.1|CW448428 fsbb001f182a11k0 Sorghum methylation... 100 4e-019
gb|BG049053.1|BG049053 OV1_22_F09.g1_A002 Ovary 1 (OV1) Sor... 100 4e-019
gb|CD226725.1|CD226725 CCC1_47_H05.g1_A007 Callus culture/c... 100 4e-019
gb|BG463695.1|BG463695 EM1_50_H02.g1_A002 Embryo 1 (EM1) So... 98 2e-018
gb|AW924442.1|AW924442 WS1_69_C06.g1_A002 Water-stressed 1 ... 94 2e-017
gb|CD220604.1|CD220604 CCC1_68_C10.b1_A007 Callus culture/c... 94 2e-017
gb|CD221392.1|CD221392 CCC1_54_C04.b1_A007 Callus culture/c... 94 2e-017
gb|CD221665.1|CD221665 CCC1_70_G05.b1_A007 Callus culture/c... 94 2e-017
gb|CD222097.1|CD222097 CCC1_2_C04.b1_A007 Callus culture/ce... 94 2e-017
gb|CD228683.1|CD228683 CCC1_9_D11.b1_A007 Callus culture/ce... 94 2e-017
gb|CD463839.1|CD463839 ETH1_47_H03.b1_A002 Ethylene-treated... 94 2e-017
gb|CD463973.1|CD463973 ETH1_47_H03.g1_A002 Ethylene-treated... 94 2e-017
gb|CF770982.1|CF770982 DSBF1_12_D05.g1_A010 Drought-stresse... 94 2e-017
gb|BG464391.1|BG464391 EM1_69_B11.g1_A002 Embryo 1 (EM1) So... 92 1e-016
gb|CD221556.1|CD221556 CCC1_55_F09.g1_A007 Callus culture/c... 90 4e-016
gb|CD222724.1|CD222724 CCC1_23_G10.g1_A007 Callus culture/c... 90 4e-016
gb|CD222883.1|CD222883 CCC1_24_C04.g1_A007 Callus culture/c... 90 4e-016
gb|CD223234.1|CD223234 CCC1_26_D09.g1_A007 Callus culture/c... 90 4e-016
gb|CD226424.1|CD226424 CCC1_45_F08.g1_A007 Callus culture/c... 90 4e-016
gb|CD226602.1|CD226602 CCC1_46_E08.g1_A007 Callus culture/c... 90 4e-016
gb|CD227445.1|CD227445 CCC1_51_E06.g1_A007 Callus culture/c... 90 4e-016
gb|CD229358.1|CD229358 CCC1_14_E11.g1_A007 Callus culture/c... 90 4e-016
gb|CD229697.1|CD229697 CCC1_18_D08.g1_A007 Callus culture/c... 90 4e-016
gb|CD432211.1|CD432211 ETH1_26_H07.g1_A002 Ethylene-treated... 90 4e-016
gb|CD223041.1|CD223041 CCC1_25_F06.g1_A007 Callus culture/c... 88 2e-015
gb|DQ190423.1| Sorghum halepense isolate hal4 chitinase-B (... 88 2e-015
gb|CW119449.1|CW119449 104_496_11108775_116_34638_058 Sorgh... 86 6e-015
gb|CW302450.1|CW302450 104_786_11464725_116_35662_085 Sorgh... 86 6e-015
gb|BG412507.1|BG412507 OV2_35_C01.g1_A002 Ovary 2 (OV2) Sor... 86 6e-015
gb|BG557755.1|BG557755 EM1_56_F01.g1_A002 Embryo 1 (EM1) So... 86 6e-015
gb|CD220577.1|CD220577 CCC1_68_C11.b1_A007 Callus culture/c... 86 6e-015
gb|CD222476.1|CD222476 CCC1_22_B04.b1_A007 Callus culture/c... 86 6e-015
gb|CD222500.1|CD222500 CCC1_22_B03.b1_A007 Callus culture/c... 86 6e-015
gb|CD228603.1|CD228603 CCC1_8_E11.g1_A007 Callus culture/ce... 86 6e-015
gb|CD431984.1|CD431984 ETH1_12_F04.b1_A002 Ethylene-treated... 86 6e-015
gb|DQ190422.1| Sorghum halepense isolate hal3 chitinase-B (... 86 6e-015
gb|CW493211.1|CW493211 fsbb001f283n22k0 Sorghum methylation... 84 2e-014
gb|AW287001.2|AW287001 LG1_264_C03.b1_A002 Light Grown 1 (L... 84 2e-014
gb|CD226002.1|CD226002 CCC1_42_B03.g1_A007 Callus culture/c... 84 2e-014
gb|CW447826.1|CW447826 fsbb001f181b24f0 Sorghum methylation... 82 9e-014
gb|CD223379.1|CD223379 CCC1_27_E04.g1_A007 Callus culture/c... 82 9e-014
gb|CD229356.1|CD229356 CCC1_14_A10.g1_A007 Callus culture/c... 82 9e-014
gb|CD464127.1|CD464127 ETH1_48_G10.g1_A002 Ethylene-treated... 82 9e-014
gb|DQ190424.1| Sorghum halepense isolate hal6 chitinase-B (... 80 4e-013
gb|CW204756.1|CW204756 104_632_11186715_148_36922_002 Sorgh... 78 1e-012
gb|CW230071.1|CW230071 104_671_11207654_116_37270_053 Sorgh... 78 1e-012
gb|BE593437.1|BE593437 WS1_97_H03.b1_A002 Water-stressed 1 ... 78 1e-012
gb|CD220480.1|CD220480 CCC1_67_F06.g1_A007 Callus culture/c... 78 1e-012
gb|CD220708.1|CD220708 CCC1_68_C10.g1_A007 Callus culture/c... 78 1e-012
gb|CD221837.1|CD221837 CCC1_71_F05.b1_A007 Callus culture/c... 78 1e-012
gb|CD222029.1|CD222029 CCC1_1_C09.g1_A007 Callus culture/ce... 78 1e-012
gb|CD222692.1|CD222692 CCC1_23_G09.g1_A007 Callus culture/c... 78 1e-012
gb|CD223848.1|CD223848 CCC1_30_F03.g1_A007 Callus culture/c... 78 1e-012
gb|CD226858.1|CD226858 CCC1_48_E04.g1_A007 Callus culture/c... 78 1e-012
gb|CD227763.1|CD227763 CCC1_53_C09.g1_A007 Callus culture/c... 78 1e-012
gb|CD228252.1|CD228252 CCC1_6_E03.g1_A007 Callus culture/ce... 78 1e-012
gb|CD236439.1|CD236439 SS1_34_G03.b1_A012 Salt-stressed see... 78 1e-012
gb|CD462568.1|CD462568 ETH1_38_G06.g1_A002 Ethylene-treated... 78 1e-012
gb|BG464063.1|BG464063 EM1_69_B11.b1_A002 Embryo 1 (EM1) So... 76 6e-012
gb|CD220668.1|CD220668 CCC1_68_B04.g1_A007 Callus culture/c... 76 6e-012
gb|AW745790.1|AW745790 WS1_37_H11.b1_A002 Water-stressed 1 ... 74 2e-011
gb|AW923860.1|AW923860 DG1_60_H07.g1_A002 Dark Grown 1 (DG1... 74 2e-011
gb|CD229365.1|CD229365 CCC1_14_D09.g1_A007 Callus culture/c... 74 2e-011
gb|CD229563.1|CD229563 CCC1_16_C07.g1_A007 Callus culture/c... 74 2e-011
gb|CN130309.1|CN130309 RHOH1_40_D04.g1_A002 Acid- and alkal... 74 2e-011
gb|CW405243.1|CW405243 fsbb001f097l13k0 Sorghum methylation... 72 9e-011
gb|BG102992.1|BG102992 RHIZ2_35_G08.b1_A003 Rhizome2 (RHIZ2... 72 9e-011
gb|CW280673.1|CW280673 104_756_11407748_148_35454_080 Sorgh... 70 4e-010
gb|CW437319.1|CW437319 fsbb001f154g03k0 Sorghum methylation... 70 4e-010
gb|BG047953.1|BG047953 OV1_25_H02.g1_A002 Ovary 1 (OV1) Sor... 70 4e-010
gb|CD229903.1|CD229903 CCC1_20_C03.g1_A007 Callus culture/c... 70 4e-010
gb|CW200665.1|CW200665 104_626_11184168_148_36867_092 Sorgh... 68 1e-009
gb|CL191324.1|CL191324 104_410_10906720_114_32533_060 Sorgh... 66 6e-009
gb|CD220677.1|CD220677 CCC1_68_C11.g1_A007 Callus culture/c... 66 6e-009
gb|CD224981.1|CD224981 CCC1_37_D02.g1_A007 Callus culture/c... 66 6e-009
gb|CD225687.1|CD225687 CCC1_40_B05.g1_A007 Callus culture/c... 66 6e-009
gb|CD223669.1|CD223669 CCC1_29_G02.g1_A007 Callus culture/c... 64 2e-008
gb|CW263590.1|CW263590 104_731_11230799_148_35217_082 Sorgh... 62 9e-008
gb|CN129927.1|CN129927 RHOH1_38_F07.b1_A002 Acid- and alkal... 62 9e-008
gb|CN130014.1|CN130014 RHOH1_38_F07.g1_A002 Acid- and alkal... 62 9e-008
gb|CW429228.1|CW429228 fsbb001f142f23k0 Sorghum methylation... 60 3e-007
gb|BG649146.1|BG649146 EM1_56_F01.b1_A002 Embryo 1 (EM1) So... 60 3e-007
gb|CD228270.1|CD228270 CCC1_6_F02.g1_A007 Callus culture/ce... 60 3e-007
gb|AW672289.1|AW672289 LG1_358_A05.b1_A002 Light Grown 1 (L... 58 1e-006
gb|AW746429.1|AW746429 WS1_53_G09.b1_A002 Water-stressed 1 ... 58 1e-006
gb|AW922596.1|AW922596 DG1_46_C01.b1_A002 Dark Grown 1 (DG1... 58 1e-006
gb|BE357497.1|BE357497 DG1_20_E06.b2_A002 Dark Grown 1 (DG1... 58 1e-006
gb|BE358239.1|BE358239 DG1_26_D03.b2_A002 Dark Grown 1 (DG1... 58 1e-006
gb|BG356189.1|BG356189 EM1_22_E10.b1_A002 Embryo 1 (EM1) So... 58 1e-006
gb|CD432032.1|CD432032 ETH1_12_F04.g1_A002 Ethylene-treated... 58 1e-006
gb|CF675624.1|CF675624 CHTN3 Subtractive cDNA library from ... 58 1e-006
gb|CD228767.1|CD228767 CCC1_9_D11.g1_A007 Callus culture/ce... 54 2e-005
gb|BZ338038.1|BZ338038 ia92e12.b1 WGS-SbicolorF (JM107 adap... 52 8e-005
gb|CL150624.1|CL150624 104_332_10778666_116_31358_218 Sorgh... 52 8e-005
gb|CL158767.1|CL158767 104_347_10803772_114_31377_364 Sorgh... 52 8e-005
gb|CL161206.1|CL161206 104_352_10805558_116_31827_230 Sorgh... 52 8e-005
gb|CW030154.1|CW030154 104_258_10500091_114_30403 Sorghum m... 52 8e-005
gb|CW054562.1|CW054562 104_295_10516602_114_30186 Sorghum m... 52 8e-005
gb|CW120215.1|CW120215 104_497_11109200_148_34647_024 Sorgh... 52 8e-005
gb|CW259984.1|CW259984 104_726_11228718_148_35189_023 Sorgh... 52 8e-005
gb|CW276618.1|CW276618 104_750_11405587_148_35398_074 Sorgh... 52 8e-005
gb|CW285684.1|CW285684 104_763_11410466_116_35510_013 Sorgh... 52 8e-005
gb|CW357973.1|CW357973 fsbb001f024n22f0 Sorghum methylation... 52 8e-005
gb|CW362042.1|CW362042 fsbb001f030o20k0 Sorghum methylation... 52 8e-005
gb|CW388024.1|CW388024 fsbb001f072j20f0 Sorghum methylation... 52 8e-005
gb|CW388025.1|CW388025 fsbb001f072j20k0 Sorghum methylation... 52 8e-005
gb|CW394373.1|CW394373 fsbb001f081p01f0 Sorghum methylation... 52 8e-005
gb|CW418572.1|CW418572 fsbb001f123b03f0 Sorghum methylation... 52 8e-005
gb|CW429227.1|CW429227 fsbb001f142f23f0 Sorghum methylation... 52 8e-005
gb|CW430428.1|CW430428 fsbb001f144c05f0 Sorghum methylation... 52 8e-005
gb|CW430429.1|CW430429 fsbb001f144c05k0 Sorghum methylation... 52 8e-005
gb|CW448427.1|CW448427 fsbb001f182a11f0 Sorghum methylation... 52 8e-005
gb|CW493210.1|CW493210 fsbb001f283n22f0 Sorghum methylation... 52 8e-005
gb|AW746421.1|AW746421 WS1_53_B03.b1_A002 Water-stressed 1 ... 52 8e-005
gb|BG047595.1|BG047595 OV1_25_H02.b1_A002 Ovary 1 (OV1) Sor... 52 8e-005
gb|BG048760.1|BG048760 OV1_22_F09.b1_A002 Ovary 1 (OV1) Sor... 52 8e-005
gb|CF486597.1|CF486597 POL1_38_D07.g1_A002 Pollen Sorghum b... 52 8e-005
gb|CN130255.1|CN130255 RHOH1_40_F08.b1_A002 Acid- and alkal... 52 8e-005
gb|CN130329.1|CN130329 RHOH1_40_F08.g1_A002 Acid- and alkal... 52 8e-005
gb|CN137269.1|CN137269 OX1_56_F03.b1_A002 Oxidatively-stres... 52 8e-005
gb|CN137353.1|CN137353 OX1_56_F03.g1_A002 Oxidatively-stres... 52 8e-005
gb|BG556657.1|BG556657 EM1_37_H12.b1_A002 Embryo 1 (EM1) So... 50 3e-004
gb|CD220381.1|CD220381 CCC1_66_G11.g1_A007 Callus culture/c... 50 3e-004
gb|CD222193.1|CD222193 CCC1_2_C04.g1_A007 Callus culture/ce... 50 3e-004
gb|CD228772.1|CD228772 CCC1_9_D03.g1_A007 Callus culture/ce... 50 3e-004
gb|CD229825.1|CD229825 CCC1_19_F11.g1_A007 Callus culture/c... 50 3e-004
gb|CD229831.1|CD229831 CCC1_19_B02.g1_A007 Callus culture/c... 50 3e-004
gb|CD236461.1|CD236461 SS1_34_G03.g1_A012 Salt-stressed see... 50 3e-004
gb|CW307372.1|CW307372 104_795_11468105_148_35736_073 Sorgh... 48 0.001
gb|CF675623.1|CF675623 CHTN2 Subtractive cDNA library from ... 48 0.001
gb|CN130235.1|CN130235 RHOH1_40_D04.b1_A002 Acid- and alkal... 46 0.005
gb|CW065719.1|CW065719 104_312_10523301_114_30129 Sorghum m... 44 0.020
gb|CW415388.1|CW415388 fsbb001f115h14f0 Sorghum methylation... 44 0.020
gb|CW451829.1|CW451829 fsbb001f192b10k0 Sorghum methylation... 44 0.020
gb|CL171657.1|CL171657 104_373_10889578_116_31777_250 Sorgh... 42 0.081
gb|CW158696.1|CW158696 104_564_11148955_148_36400_072 Sorgh... 42 0.081
gb|CW193739.1|CW193739 104_616_11179726_148_36783_085 Sorgh... 42 0.081
gb|CW318997.1|CW318997 104_811_11474252_148_35885_074 Sorgh... 42 0.081
gb|CW331683.1|CW331683 104_829_11481030_148_36029_029 Sorgh... 42 0.081
gb|CW408687.1|CW408687 fsbb001f102k22k0 Sorghum methylation... 42 0.081
gb|CW792034.1|CW792034 SP__Ba0086P24.r SP__Ba Sorghum propi... 42 0.081
gb|BZ338459.1|BZ338459 ia95e03.b1 WGS-SbicolorF (JM107 adap... 40 0.32
gb|CW090572.1|CW090572 104_436_10949355_114_32606_008 Sorgh... 40 0.32
gb|CW090573.1|CW090573 104_436_10949355_116_32610_008 Sorgh... 40 0.32
gb|CW206617.1|CW206617 104_635_11187687_116_36961_058 Sorgh... 40 0.32
gb|CW488277.1|CW488277 fsbb001f254j12f0 Sorghum methylation... 40 0.32
gb|CW502385.1|CW502385 fsbb001f298l04k0 Sorghum methylation... 40 0.32
gb|BE597800.1|BE597800 PI1_65_E11.g1_A002 Pathogen induced ... 40 0.32
gb|BE598085.1|BE598085 PI1_65_E11.b1_A002 Pathogen induced ... 40 0.32
gb|BG560305.1|BG560305 RHIZ2_72_F06.b1_A003 Rhizome2 (RHIZ2... 40 0.32
>gb|CD227591.1|CD227591 CCC1_52_A02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_52_A02_A007 5', mRNA sequence
Length = 619
Score = 684 bits (345), Expect = 0.0
Identities = 384/397 (96%)
Strand = Plus / Plus
Query: 16 gtgccagtcgggcccctgcgacgtgccggagaccaacaacgcgtccgtggccagcatcgt 75
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 223 gtgccagtcgggcccctgcgacgtgccggcgaccaacaacgtgtccgtggccagcatcgt 282
Query: 76 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcgtgcgaggccaacgg 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcgtgcgaggccaacgg 342
Query: 136 cttctacacccgcgacgccttcctcgccgccgccggctactacccggcgttcggccgcac 195
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 343 cttctacacccgcgacgccttcctcgccgccgccggctactacccgtccttcggccgcac 402
Query: 196 cggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacga 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacga 462
Query: 256 gaccataaagttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gaccataaagttctgctacatcaacgagatcgacgggccgagcaagaactactgcgacgc 522
Query: 316 gaacaacacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgca 375
|||||||||| |||||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 523 gaacaacacggagtggccgtgccaggcggggaaagggtactacgggcgaggcccgctgca 582
Query: 376 gatctcctggaacttcaactacgggcccgcggggcag 412
|||||| ||||||| |||||||||||| |||||||||
Sbjct: 583 gatctcgtggaactacaactacgggccggcggggcag 619
>gb|CD227568.1|CD227568 CCC1_52_A02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_52_A02_A007 3', mRNA sequence
Length = 618
Score = 670 bits (338), Expect = 0.0
Identities = 413/438 (94%)
Strand = Plus / Plus
Query: 239 ggcaacgccaaccacgagaccataaagttctgctacatcaacgagatcgacgggccgagc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaacgccaaccacgagaccataaagttctgctacatcaacgagatcgacgggccgagc 60
Query: 299 aagaactactgcgaccggaacaacacgcagtggccgtgccaggcggggaaggggtactac 358
||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 61 aagaactactgcgacgcgaacaacacggagtggccgtgccaggcggggaaagggtactac 120
Query: 359 ggccgcggcccgctgcagatctcctggaacttcaactacgggcccgcggggcagagcatc 418
|| || ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||
Sbjct: 121 gggcgaggcccgctgcagatctcgtggaactacaactacgggccggcggggcagagcatc 180
Query: 419 ggcttcgacgggctgggcgaccccgacgcggtggcgcgcagcgccgtgctcgcgttccgc 478
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 181 ggcttcgacgggctgggcgaccccgacgcggtggcgcgcagcgccgtcgtcgcgttccgg 240
Query: 479 tccgcgctctggtactggatgaacaacgtgcacggggccatcgtctccggccagggcttc 538
| |||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||
Sbjct: 241 gcggcgctctggtactggatgaacagcgtgcacggggtcttcgtctccgggcagggcttc 300
Query: 539 ggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaaccccaactcc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 ggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaacccggactcc 360
Query: 599 gtcaacaaccgcgtcgcctactacaagcagttctgccaggatttcggcgtcgacccgggc 658
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 361 gtcaacgaccgcgtcgcctactacaagcagttctgccaggatttcggcgtcgacccagga 420
Query: 659 aacaacctcacctgctga 676
| ||||||||| ||||||
Sbjct: 421 agcaacctcacatgctga 438
>gb|CW056944.1|CW056944 104_298_10517953_114_30151 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10517953, DNA
sequence
Length = 652
Score = 620 bits (313), Expect = e-176
Identities = 388/413 (93%)
Strand = Plus / Minus
Query: 264 agttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccggaacaaca 323
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 477 agttctgctacatcaacgagatcgacgggccgagcaagaactactgcgacgcgaacaaca 418
Query: 324 cgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcct 383
|| |||||||||||||||||||||| ||||||||||| || ||||||||||||||||| |
Sbjct: 417 cggagtggccgtgccaggcggggaaagggtactacgggcgaggcccgctgcagatctcgt 358
Query: 384 ggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg 443
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ggaactacaactacgggccggcggggcagagcatcggcttcgacgggctgggcgaccccg 298
Query: 444 acgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaaca 503
|||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||
Sbjct: 297 acgcggtggcgcgcagcgccgtcgtcgcgttccgggcggcgctctggtactggatgaaca 238
Query: 504 acgtgcacggggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacg 563
||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 237 gcgtgcacggggtcttcgtctccgggcagggcttcggcgccaccatccgggccatcaacg 178
Query: 564 gcgcgctcgagtgcgacggcaagaaccccaactccgtcaacaaccgcgtcgcctactaca 623
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 177 gcgcgctcgagtgcgacggcaagaacccggactccgtcaacgaccgcgtcgcctactaca 118
Query: 624 agcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgctga 676
||||||||||||||||||||||||||||||| || | ||||||||| ||||||
Sbjct: 117 agcagttctgccaggatttcggcgtcgacccaggaagcaacctcacatgctga 65
Score = 137 bits (69), Expect = 2e-030
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 195 ccggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacg 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ccggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacg 593
Query: 255 agaccataa 263
|||||||||
Sbjct: 592 agaccataa 584
>gb|CW324492.1|CW324492 104_819_11477191_148_35910_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477191, DNA
sequence
Length = 720
Score = 620 bits (313), Expect = e-176
Identities = 388/413 (93%)
Strand = Plus / Plus
Query: 264 agttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccggaacaaca 323
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 agttctgctacatcaacgagatcgacgggccgagcaagaactactgcgacgcgaacaaca 120
Query: 324 cgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcct 383
|| |||||||||||||||||||||| ||||||||||| || ||||||||||||||||| |
Sbjct: 121 cggagtggccgtgccaggcggggaaagggtactacgggcgaggcccgctgcagatctcgt 180
Query: 384 ggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg 443
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggaactacaactacgggccggcggggcagagcatcggcttcgacgggctgggcgaccccg 240
Query: 444 acgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaaca 503
|||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||
Sbjct: 241 acgcggtggcgcgcagcgccgtcgtcgcgttccgggcggcgctctggtactggatgaaca 300
Query: 504 acgtgcacggggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacg 563
||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 gcgtgcacggggtcttcgtctccgggcagggcttcggcgccaccatccgggccatcaacg 360
Query: 564 gcgcgctcgagtgcgacggcaagaaccccaactccgtcaacaaccgcgtcgcctactaca 623
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 361 gcgcgctcgagtgcgacggcaagaacccggactccgtcaacgaccgcgtcgcctactaca 420
Query: 624 agcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgctga 676
||||||||||||||||||||||||||||||| || | ||||||||| ||||||
Sbjct: 421 agcagttctgccaggatttcggcgtcgacccaggaagcaacctcacatgctga 473
>gb|CW363965.1|CW363965 fsbb001f035m22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035m22, DNA
sequence
Length = 690
Score = 620 bits (313), Expect = e-176
Identities = 388/413 (93%)
Strand = Plus / Minus
Query: 264 agttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccggaacaaca 323
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 570 agttctgctacatcaacgagatcgacgggccgagcaagaactactgcgacgcgaacaaca 511
Query: 324 cgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcct 383
|| |||||||||||||||||||||| ||||||||||| || ||||||||||||||||| |
Sbjct: 510 cggagtggccgtgccaggcggggaaagggtactacgggcgaggcccgctgcagatctcgt 451
Query: 384 ggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg 443
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggaactacaactacgggccggcggggcagagcatcggcttcgacgggctgggcgaccccg 391
Query: 444 acgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaaca 503
|||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||
Sbjct: 390 acgcggtggcgcgcagcgccgtcgtcgcgttccgggcggcgctctggtactggatgaaca 331
Query: 504 acgtgcacggggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacg 563
||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 330 gcgtgcacggggtcttcgtctccgggcagggcttcggcgccaccatccgggccatcaacg 271
Query: 564 gcgcgctcgagtgcgacggcaagaaccccaactccgtcaacaaccgcgtcgcctactaca 623
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 270 gcgcgctcgagtgcgacggcaagaacccggactccgtcaacgaccgcgtcgcctactaca 211
Query: 624 agcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgctga 676
||||||||||||||||||||||||||||||| || | ||||||||| ||||||
Sbjct: 210 agcagttctgccaggatttcggcgtcgacccaggaagcaacctcacatgctga 158
>gb|CW363966.1|CW363966 fsbb001f035m22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035m22, DNA
sequence
Length = 578
Score = 452 bits (228), Expect = e-125
Identities = 243/248 (97%)
Strand = Plus / Plus
Query: 16 gtgccagtcgggcccctgcgacgtgccggagaccaacaacgcgtccgtggccagcatcgt 75
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 284 gtgccagtcgggcccctgcgacgtgccggcgaccaacaacgtgtccgtggccagcatcgt 343
Query: 76 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcgtgcgaggccaacgg 135
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 344 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcctgcgaggccaacgg 403
Query: 136 cttctacacccgcgacgccttcctcgccgccgccggctactacccggcgttcggccgcac 195
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 404 cttctacacccgcgacgccttcctcgccgccgccggctactacccgtccttcggccgcac 463
Query: 196 cggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacga 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacga 523
Query: 256 gaccataa 263
||||||||
Sbjct: 524 gaccataa 531
>gb|CW405242.1|CW405242 fsbb001f097l13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f097l13, DNA
sequence
Length = 641
Score = 452 bits (228), Expect = e-125
Identities = 243/248 (97%)
Strand = Plus / Plus
Query: 16 gtgccagtcgggcccctgcgacgtgccggagaccaacaacgcgtccgtggccagcatcgt 75
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 53 gtgccagtcgggcccctgcgacgtgccggcgaccaacaacgtgtccgtggccagcatcgt 112
Query: 76 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcgtgcgaggccaacgg 135
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 113 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcctgcgaggccaacgg 172
Query: 136 cttctacacccgcgacgccttcctcgccgccgccggctactacccggcgttcggccgcac 195
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 173 cttctacacccgcgacgccttcctcgccgccgccggctactacccgtccttcggccgcac 232
Query: 196 cggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacga 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 cggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacga 292
Query: 256 gaccataa 263
||||||||
Sbjct: 293 gaccataa 300
Score = 339 bits (171), Expect = 2e-091
Identities = 220/235 (93%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 264 agttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccggaacaaca 323
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 407 agttctgctacatcaacgagatcgacgggccgagcaagaactactgcgacgcgaacaaca 466
Query: 324 cgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcct 383
|| |||||||||||||||||||||| ||||||||||| || ||||||||||||||||| |
Sbjct: 467 cggagtggccgtgccaggcggggaaagggtactacgggcgaggcccgctgcagatctcgt 526
Query: 384 ggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcga-cccc 442
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 527 ggaactacaactacgggccggcggggcagagcatcggcttcgacgggctgggcgaccccc 586
Query: 443 gacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactgga 497
||||||||||||||||||||||| |||||||||| | ||||||||||||||||
Sbjct: 587 gacgcggtggcgcgcagcgccgtcgtcgcgttccgggcggcgctctggtactgga 641
>gb|CW425870.1|CW425870 fsbb001f137a05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137a05, DNA
sequence
Length = 484
Score = 428 bits (216), Expect = e-118
Identities = 240/248 (96%)
Strand = Plus / Minus
Query: 16 gtgccagtcgggcccctgcgacgtgccggagaccaacaacgcgtccgtggccagcatcgt 75
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 286 gtgccagtcgggcccctgcgacgtgccggcgaccaacaacgtgtccgtggccagcatcgt 227
Query: 76 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcgtgcgaggccaacgg 135
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 226 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcctgcgaggccaacgg 167
Query: 136 cttctacacccgcgacgccttcctcgccgccgccggctactacccggcgttcggccgcac 195
||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||
Sbjct: 166 cttctacacccgcgacgccttcctccccgccgccggctactacccgtccttcggccgcac 107
Query: 196 cggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacga 255
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 106 cggcaccgtcgacgactccaagcgcgagatccccgccttcttcggcaaccccaaccacga 47
Query: 256 gaccataa 263
||||||||
Sbjct: 46 gaccataa 39
>gb|CW400946.1|CW400946 fsbb001f091i05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f091i05, DNA
sequence
Length = 547
Score = 418 bits (211), Expect = e-115
Identities = 262/279 (93%)
Strand = Plus / Minus
Query: 398 gggcccgcggggcagagcatcggcttcgacgggctgggcgaccccgacgcggtggcgcgc 457
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gggccggcggggcagagcatcggcttcgacgggctgggcgaccccgacgcggtggcgcgc 488
Query: 458 agcgccgtgctcgcgttccgctccgcgctctggtactggatgaacaacgtgcacggggcc 517
|||||||| |||||||||| | |||||||||||||||||||||| ||||||||||| |
Sbjct: 487 agcgccgtcgtcgcgttccgggcggcgctctggtactggatgaacagcgtgcacggggtc 428
Query: 518 atcgtctccggccagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgc 577
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttcgtctccgggcagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgc 368
Query: 578 gacggcaagaaccccaactccgtcaacaaccgcgtcgcctactacaagcagttctgccag 637
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 367 gacggcaagaacccggactccgtcaacgaccgcgtcgcctactacaagcagttctgccag 308
Query: 638 gatttcggcgtcgacccgggcaacaacctcacctgctga 676
||||||||||||||||| || | ||||||||| ||||||
Sbjct: 307 gatttcggcgtcgacccaggaagcaacctcacatgctga 269
>gb|CW324491.1|CW324491 104_819_11477191_116_35914_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477191, DNA
sequence
Length = 679
Score = 373 bits (188), Expect = e-101
Identities = 236/252 (93%)
Strand = Plus / Minus
Query: 425 gacgggctgggcgaccccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcg 484
||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||
Sbjct: 679 gacgggctgggcgaccccgacgcggtggcgcgcagcgccgtcgtcgcgttccgggcggcg 620
Query: 485 ctctggtactggatgaacaacgtgcacggggccatcgtctccggccagggcttcggcgcc 544
||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||
Sbjct: 619 ctctggtactggatgaacagcgtgcacggggtcttcgtctccgggcagggcttcggcgcc 560
Query: 545 accatccgggccatcaacggcgcgctcgagtgcgacggcaagaaccccaactccgtcaac 604
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 559 accatccgggccatcaacggcgcgctcgagtgcgacggcaagaacccggactccgtcaac 500
Query: 605 aaccgcgtcgcctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaac 664
||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 499 gaccgcgtcgcctactacaagcagttctgccaggatttcggcgtcgacccaggaagcaac 440
Query: 665 ctcacctgctga 676
||||| ||||||
Sbjct: 439 ctcacatgctga 428
>gb|CW046146.1|CW046146 104_283_10509998_114_30137 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509998, DNA
sequence
Length = 487
Score = 349 bits (176), Expect = 3e-094
Identities = 191/196 (97%)
Strand = Plus / Minus
Query: 16 gtgccagtcgggcccctgcgacgtgccggagaccaacaacgcgtccgtggccagcatcgt 75
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 196 gtgccagtcgggcccctgcgacgtgccggcgaccaacaacgtgtccgtggccagcatcgt 137
Query: 76 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcgtgcgaggccaacgg 135
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 136 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcctgcgaggccaacgg 77
Query: 136 cttctacacccgcgacgccttcctcgccgccgccggctactacccggcgttcggccgcac 195
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 76 cttctacacccgcgacgccttcctcgccgccgccggctactacccgtccttcggccgcac 17
Query: 196 cggcaccgtcgacgac 211
||||||||||||||||
Sbjct: 16 cggcaccgtcgacgac 1
>gb|CW400945.1|CW400945 fsbb001f091i05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f091i05, DNA
sequence
Length = 439
Score = 349 bits (176), Expect = 3e-094
Identities = 185/188 (98%)
Strand = Plus / Plus
Query: 76 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcgtgcgaggccaacgg 135
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gacgccggccttcttcgacgcgctcctcgcgcaggccgccgcctcctgcgaggccaacgg 60
Query: 136 cttctacacccgcgacgccttcctcgccgccgccggctactacccggcgttcggccgcac 195
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 61 cttctacacccgcgacgccttcctcgccgccgccggctactacccgtccttcggccgcac 120
Query: 196 cggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacga 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccacga 180
Query: 256 gaccataa 263
||||||||
Sbjct: 181 gaccataa 188
Score = 208 bits (105), Expect = 6e-052
Identities = 135/145 (93%)
Strand = Plus / Plus
Query: 264 agttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccggaacaaca 323
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 295 agttctgctacatcaacgagatcgacgggccgagcaagaactactgcgacgcgaacaaca 354
Query: 324 cgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcct 383
|| |||||||||||||||||||||| ||||||||||| || ||||||||||| ||||| |
Sbjct: 355 cggagtggccgtgccaggcggggaaagggtactacgggcgaggcccgctgcaaatctcgt 414
Query: 384 ggaacttcaactacgggcccgcggg 408
|||||| |||||||||||| |||||
Sbjct: 415 ggaactacaactacgggccggcggg 439
>gb|BE357733.1|BE357733 DG1_22_D10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 593
Score = 147 bits (74), Expect = 2e-033
Identities = 158/186 (84%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||||||||||| ||| || |||||||| | | ||||||||
Sbjct: 404 caagcgcgagatcgccgccttcttcgcgcacgtcacgcacgagactggacatttctgcta 463
Query: 274 catcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacgcagtggcc 333
||||||||||||| |||| |||||| ||||||||||||| |||||||| |||||||||
Sbjct: 464 catcaacgagatcaacggagcgagcaggaactactgcgacgcgaacaacaggcagtggcc 523
Query: 334 gtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctggaacttcaa 393
||| |||||||| ||||||||| |||||||||||||||||||| ||||||| |||
Sbjct: 524 atgcgccccggggaagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 583
Query: 394 ctacgg 399
||||||
Sbjct: 584 ctacgg 589
>gb|CW231901.1|CW231901 104_681_11211372_148_37350_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211372, DNA
sequence
Length = 510
Score = 141 bits (71), Expect = 1e-031
Identities = 143/167 (85%)
Strand = Plus / Minus
Query: 266 ttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacg 325
||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||| |
Sbjct: 206 ttctgctacatcaacgagatcaacggagcgagcaggaactactgcgacgcgaacaacagg 147
Query: 326 cagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctgg 385
|||||||| ||| |||||||| ||||||||| |||||||||||||||||||| |||
Sbjct: 146 cagtggccatgcgccccggggaagaagtactacgggcgcggcccgctgcagatctcgtgg 87
Query: 386 aacttcaactacgggcccgcggggcagagcatcggcttcgacgggct 432
|||| ||||||||| || || || || ||||||||||||||||||
Sbjct: 86 aactacaactacggtcctgccggaaaggccatcggcttcgacgggct 40
>gb|CW285685.1|CW285685 104_763_11410466_148_35506_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410466, DNA
sequence
Length = 285
Score = 141 bits (71), Expect = 1e-031
Identities = 143/167 (85%)
Strand = Plus / Minus
Query: 266 ttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacg 325
||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||| |
Sbjct: 207 ttctgctacatcaacgagatcaacggagcgagcaggaactactgcgacgcgaacaacagg 148
Query: 326 cagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctgg 385
|||||||| ||| |||||||| ||||||||| |||||||||||||||||||| |||
Sbjct: 147 cagtggccatgcgccccggggaagaagtactacgggcgcggcccgctgcagatctcgtgg 88
Query: 386 aacttcaactacgggcccgcggggcagagcatcggcttcgacgggct 432
|||| ||||||||| || || || || ||||||||||||||||||
Sbjct: 87 aactacaactacggtcctgccggaaaggccatcggcttcgacgggct 41
>gb|CW489486.1|CW489486 fsbb001f274h04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f274h04, DNA
sequence
Length = 597
Score = 141 bits (71), Expect = 1e-031
Identities = 143/167 (85%)
Strand = Plus / Plus
Query: 266 ttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacg 325
||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||| |
Sbjct: 4 ttctgctacatcaacgagatcaacggagcgagcaggaactactgcgacgcgaacaacagg 63
Query: 326 cagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctgg 385
|||||||| ||| |||||||| ||||||||| |||||||||||||||||||| |||
Sbjct: 64 cagtggccatgcgccccggggaagaagtactacgggcgcggcccgctgcagatctcgtgg 123
Query: 386 aacttcaactacgggcccgcggggcagagcatcggcttcgacgggct 432
|||| ||||||||| || || || || ||||||||||||||||||
Sbjct: 124 aactacaactacggtcctgccggaaaggccatcggcttcgacgggct 170
Score = 99.6 bits (50), Expect = 4e-019
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 262 caggggttcggcgccaccatccgggccatcaacggcgccctcgagtgcaacggcaagaac 321
Query: 590 cc 591
||
Sbjct: 322 cc 323
Score = 60.0 bits (30), Expect = 3e-007
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 641 ttcggcgtcgacccgggcaacaacctcacctgct 674
||||||||||||||||| ||||||||||||||||
Sbjct: 373 ttcggcgtcgacccggggaacaacctcacctgct 406
Score = 44.1 bits (22), Expect = 0.020
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 482 gcgctctggtactggatgaacaacgtgcac 511
|||||||||| |||||||||||| ||||||
Sbjct: 220 gcgctctggttctggatgaacaatgtgcac 249
>gb|BG049497.1|BG049497 OV1_20_G04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 561
Score = 141 bits (71), Expect = 1e-031
Identities = 143/167 (85%)
Strand = Plus / Plus
Query: 266 ttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacg 325
||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||| |
Sbjct: 1 ttctgctacatcaacgagatcaacggagcgagcaggaactactgcgacgcgaacaacagg 60
Query: 326 cagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctgg 385
|||||||| ||| |||||||| ||||||||| |||||||||||||||||||| |||
Sbjct: 61 cagtggccatgcgccccggggaagaagtactacgggcgcggcccgctgcagatctcgtgg 120
Query: 386 aacttcaactacgggcccgcggggcagagcatcggcttcgacgggct 432
|||| ||||||||| || || || || ||||||||||||||||||
Sbjct: 121 aactacaactacggtcctgccggaaaggccatcggcttcgacgggct 167
Score = 99.6 bits (50), Expect = 4e-019
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 259 caggggttcggcgccaccatccgggccatcaacggcgccctcgagtgcaacggcaagaac 318
Query: 590 cc 591
||
Sbjct: 319 cc 320
Score = 60.0 bits (30), Expect = 3e-007
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 641 ttcggcgtcgacccgggcaacaacctcacctgct 674
||||||||||||||||| ||||||||||||||||
Sbjct: 370 ttcggcgtcgacccggggaacaacctcacctgct 403
Score = 44.1 bits (22), Expect = 0.020
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 482 gcgctctggtactggatgaacaacgtgcac 511
|||||||||| |||||||||||| ||||||
Sbjct: 217 gcgctctggttctggatgaacaatgtgcac 246
>gb|BG102665.1|BG102665 RHIZ2_35_G08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 382
Score = 141 bits (71), Expect = 1e-031
Identities = 143/167 (85%)
Strand = Plus / Plus
Query: 266 ttctgctacatcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacg 325
||||||||||||||||||||| |||| |||||| ||||||||||||| ||||||| |
Sbjct: 37 ttctgctacatcaacgagatcaacggagcgagcaggaactactgcgacgctaacaacagg 96
Query: 326 cagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctgg 385
|||||||| ||| |||||||| ||||||||| |||||||||||||||||||| |||
Sbjct: 97 cagtggccatgcgccccggggaagaagtactacgggcgcggcccgctgcagatctcgtgg 156
Query: 386 aacttcaactacgggcccgcggggcagagcatcggcttcgacgggct 432
|||| |||||||||||| || || || ||||||||||||||||||
Sbjct: 157 aactacaactacgggcctgccggaaaggccatcggcttcgacgggct 203
Score = 109 bits (55), Expect = 4e-022
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 295 cagggcttcggcgccaccatccgggccatcaacggcgccctcgagtgcaacggcaagaac 354
Query: 590 ccc 592
|||
Sbjct: 355 ccc 357
Score = 44.1 bits (22), Expect = 0.020
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 482 gcgctctggtactggatgaacaacgtgcac 511
|||||||||| |||||||||||| ||||||
Sbjct: 253 gcgctctggttctggatgaacaatgtgcac 282
>gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 139 bits (70), Expect = 5e-031
Identities = 303/376 (80%), Gaps = 11/376 (2%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||| ||||||| | | | || |||||||||| | ||||||||
Sbjct: 13 caagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctgcta 72
Query: 274 catcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacgcagtggcc 333
||||| ||||||| || || ||| |||||||||| || ||||| |||||||||
Sbjct: 73 catcagcgagatcaac---aagaacaacgcctactgcgactcgagcaacaagcagtggcc 129
Query: 334 gtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctggaacttcaa 393
|||| ||||| || ||||||||| |||||||||||||| ||||| ||||||| |||
Sbjct: 130 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 189
Query: 394 ctacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg-acgcggtgg 452
||||||||| || ||| || |||||||||| ||||||| |||| |||| || |||||
Sbjct: 190 ctacgggcctgccgggaaggccatcggcttcaacgggct-cgcgaacccgaacaaggtgg 248
Query: 453 cgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaacaacgtgcacg 512
||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 249 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 308
Query: 513 gggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacggcgcgctcg 572
||| || ||| | |||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 309 gggtgat-gtcgc-----aggggttcggcgccaccatcagggccatcaacggcgccctcg 362
Query: 573 agtgcgacggcaagaa 588
||||| ||||||||||
Sbjct: 363 agtgcaacggcaagaa 378
>gb|AW746695.1|AW746695 WS1_54_E02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 575
Score = 139 bits (70), Expect = 5e-031
Identities = 235/286 (82%), Gaps = 8/286 (2%)
Strand = Plus / Plus
Query: 304 ctactgcgaccggaacaacacgcagtggccgtgccaggcggggaaggggtactacggccg 363
|||||||||| || ||||| ||||||||||||| ||||| || ||||||||| ||
Sbjct: 2 ctactgcgactcgagcaacaagcagtggccgtgcgccgcgggacagaagtactacgggcg 61
Query: 364 cggcccgctgcagatctcctggaacttcaactacgggcccgcggggcagagcatcggctt 423
|||||||||||| ||||| ||||||| |||||||||||| || ||| || |||||||||
Sbjct: 62 cggcccgctgcaaatctcgtggaactacaactacgggcctgccgggaaggccatcggctt 121
Query: 424 cgacgggctgggcgaccccg-acgcggtggcgcgcagcgccgtgctcgcgttccgctccg 482
| ||||||| |||| |||| || |||||||| ||||||| |||||||| | |
Sbjct: 122 caacgggct-cgcgaacccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacgg 180
Query: 483 cgctctggtactggatgaacaacgtgcacggggccatcgtctccggccagggcttcggcg 542
||||||||||||||| ||||||||||||||||| || ||| | |||| |||||||
Sbjct: 181 cgctctggtactggacgaacaacgtgcacggggtgat-gtcgc-----aggggttcggcg 234
Query: 543 ccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaa 588
|||||||| |||||||||||||||| ||||||||| ||||||||||
Sbjct: 235 ccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaa 280
>gb|AW924422.1|AW924422 WS1_69_C06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 511
Score = 139 bits (70), Expect = 5e-031
Identities = 303/376 (80%), Gaps = 11/376 (2%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||| ||||||| | | | || |||||||||| | ||||||||
Sbjct: 143 caagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctgcta 202
Query: 274 catcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacgcagtggcc 333
||||| ||||||| || || ||| |||||||||| || ||||| |||||||||
Sbjct: 203 catcagcgagatcaac---aagaacaacgcctactgcgactcgagcaacaagcagtggcc 259
Query: 334 gtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctggaacttcaa 393
|||| ||||| || ||||||||| |||||||||||||| ||||| ||||||| |||
Sbjct: 260 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 319
Query: 394 ctacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg-acgcggtgg 452
||||||||| || ||| || |||||||||| ||||||| |||| |||| || |||||
Sbjct: 320 ctacgggcctgccgggaaggccatcggcttcaacgggct-cgcgaacccgaacaaggtgg 378
Query: 453 cgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaacaacgtgcacg 512
||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 379 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 438
Query: 513 gggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacggcgcgctcg 572
||| || ||| | |||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 439 gggtgat-gtcgc-----aggggttcggcgccaccatcagggccatcaacggcgccctcg 492
Query: 573 agtgcgacggcaagaa 588
||||| ||||||||||
Sbjct: 493 agtgcaacggcaagaa 508
>gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 705
Score = 139 bits (70), Expect = 5e-031
Identities = 303/376 (80%), Gaps = 11/376 (2%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||| ||||||| | | | || |||||||||| | ||||||||
Sbjct: 15 caagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctgcta 74
Query: 274 catcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacgcagtggcc 333
||||| ||||||| || || ||| |||||||||| || ||||| |||||||||
Sbjct: 75 catcagcgagatcaac---aagaacaacgcctactgcgactcgagcaacaagcagtggcc 131
Query: 334 gtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctggaacttcaa 393
|||| ||||| || ||||||||| |||||||||||||| ||||| ||||||| |||
Sbjct: 132 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 191
Query: 394 ctacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg-acgcggtgg 452
||||||||| || ||| || |||||||||| ||||||| |||| |||| || |||||
Sbjct: 192 ctacgggcctgccgggaaggccatcggcttcaacgggct-cgcgaacccgaacaaggtgg 250
Query: 453 cgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaacaacgtgcacg 512
||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 251 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 310
Query: 513 gggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacggcgcgctcg 572
||| || ||| | |||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 311 gggtgat-gtcgc-----aggggttcggcgccaccatcagggccatcaacggcgccctcg 364
Query: 573 agtgcgacggcaagaa 588
||||| ||||||||||
Sbjct: 365 agtgcaacggcaagaa 380
>gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 519
Score = 139 bits (70), Expect = 5e-031
Identities = 303/376 (80%), Gaps = 11/376 (2%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||| ||||||| | | | || |||||||||| | ||||||||
Sbjct: 107 caagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctgcta 166
Query: 274 catcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacgcagtggcc 333
||||| ||||||| || || ||| |||||||||| || ||||| |||||||||
Sbjct: 167 catcagcgagatcaac---aagaacaacgcctactgcgactcgagcaacaagcagtggcc 223
Query: 334 gtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctggaacttcaa 393
|||| ||||| || ||||||||| |||||||||||||| ||||| ||||||| |||
Sbjct: 224 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 283
Query: 394 ctacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg-acgcggtgg 452
||||||||| || ||| || |||||||||| ||||||| |||| |||| || |||||
Sbjct: 284 ctacgggcctgccgggaaggccatcggcttcaacgggct-cgcgaacccgaacaaggtgg 342
Query: 453 cgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaacaacgtgcacg 512
||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 343 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 402
Query: 513 gggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacggcgcgctcg 572
||| || ||| | |||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 403 gggtgat-gtcgc-----aggggttcggcgccaccatcagggccatcaacggcgccctcg 456
Query: 573 agtgcgacggcaagaa 588
||||| ||||||||||
Sbjct: 457 agtgcaacggcaagaa 472
>gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_C09_A007 3', mRNA sequence
Length = 637
Score = 139 bits (70), Expect = 5e-031
Identities = 303/376 (80%), Gaps = 11/376 (2%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||| ||||||| | | | || |||||||||| | ||||||||
Sbjct: 23 caagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctgcta 82
Query: 274 catcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacgcagtggcc 333
||||| ||||||| || || ||| |||||||||| || ||||| |||||||||
Sbjct: 83 catcagcgagatcaac---aagaacaacgcctactgcgactcgagcaacaagcagtggcc 139
Query: 334 gtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctggaacttcaa 393
|||| ||||| || ||||||||| |||||||||||||| ||||| ||||||| |||
Sbjct: 140 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 199
Query: 394 ctacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg-acgcggtgg 452
||||||||| || ||| || |||||||||| ||||||| |||| |||| || |||||
Sbjct: 200 ctacgggcctgccgggaaggccatcggcttcaacgggct-cgcgaacccgaacaaggtgg 258
Query: 453 cgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaacaacgtgcacg 512
||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 259 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 318
Query: 513 gggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacggcgcgctcg 572
||| || ||| | |||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 319 gggtgat-gtcgc-----aggggttcggcgccaccatcagggccatcaacggcgccctcg 372
Query: 573 agtgcgacggcaagaa 588
||||| ||||||||||
Sbjct: 373 agtgcaacggcaagaa 388
>gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_F09_A007 3', mRNA sequence
Length = 647
Score = 139 bits (70), Expect = 5e-031
Identities = 303/376 (80%), Gaps = 11/376 (2%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||| ||||||| | | | || |||||||||| | ||||||||
Sbjct: 33 caagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctgcta 92
Query: 274 catcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacgcagtggcc 333
||||| ||||||| || || ||| |||||||||| || ||||| |||||||||
Sbjct: 93 catcagcgagatcaac---aagaacaacgcctactgcgactcgagcaacaagcagtggcc 149
Query: 334 gtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctggaacttcaa 393
|||| ||||| || ||||||||| |||||||||||||| ||||| ||||||| |||
Sbjct: 150 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 209
Query: 394 ctacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg-acgcggtgg 452
||||||||| || ||| || |||||||||| ||||||| |||| |||| || |||||
Sbjct: 210 ctacgggcctgccgggaaggccatcggcttcaacgggct-cgcgaacccgaacaaggtgg 268
Query: 453 cgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaacaacgtgcacg 512
||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 269 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 328
Query: 513 gggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacggcgcgctcg 572
||| || ||| | |||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 329 gggtgat-gtcgc-----aggggttcggcgccaccatcagggccatcaacggcgccctcg 382
Query: 573 agtgcgacggcaagaa 588
||||| ||||||||||
Sbjct: 383 agtgcaacggcaagaa 398
>gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_H05_A007 3', mRNA sequence
Length = 658
Score = 139 bits (70), Expect = 5e-031
Identities = 303/376 (80%), Gaps = 11/376 (2%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||| ||||||| | | | || |||||||||| | ||||||||
Sbjct: 35 caagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctgcta 94
Query: 274 catcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacgcagtggcc 333
||||| ||||||| || || ||| |||||||||| || ||||| |||||||||
Sbjct: 95 catcagcgagatcaac---aagaacaacgcctactgcgactcgagcaacaagcagtggcc 151
Query: 334 gtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctggaacttcaa 393
|||| ||||| || ||||||||| |||||||||||||| ||||| ||||||| |||
Sbjct: 152 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 211
Query: 394 ctacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg-acgcggtgg 452
||||||||| || ||| || |||||||||| ||||||| |||| |||| || |||||
Sbjct: 212 ctacgggcctgccgggaaggccatcggcttcaacgggct-cgcgaacccgaacaaggtgg 270
Query: 453 cgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaacaacgtgcacg 512
||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 271 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 330
Query: 513 gggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacggcgcgctcg 572
||| || ||| | |||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 331 gggtgat-gtcgc-----aggggttcggcgccaccatcagggccatcaacggcgccctcg 384
Query: 573 agtgcgacggcaagaa 588
||||| ||||||||||
Sbjct: 385 agtgcaacggcaagaa 400
>gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds
Length = 789
Score = 139 bits (70), Expect = 5e-031
Identities = 303/376 (80%), Gaps = 11/376 (2%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||| ||||||| | | | || |||||||||| | ||||||||
Sbjct: 336 caagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctgcta 395
Query: 274 catcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacgcagtggcc 333
||||| ||||||| || || ||| |||||||||| || ||||| |||||||||
Sbjct: 396 catcagcgagatcaac---aagaacaacgcctactgcgactcgagcaacaagcagtggcc 452
Query: 334 gtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctggaacttcaa 393
|||| ||||| || ||||||||| |||||||||||||| ||||| ||||||| |||
Sbjct: 453 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 512
Query: 394 ctacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg-acgcggtgg 452
||||||||| || ||| || |||||||||| ||||||| |||| |||| || |||||
Sbjct: 513 ctacgggcctgccgggaaggccatcggcttcaacgggct-cgcgaacccgaacaaggtgg 571
Query: 453 cgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaacaacgtgcacg 512
||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 572 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 631
Query: 513 gggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacggcgcgctcg 572
||| || ||| | |||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 632 gggtgat-gtcgc-----aggggttcggcgccaccatcagggccatcaacggcgccctcg 685
Query: 573 agtgcgacggcaagaa 588
||||| ||||||||||
Sbjct: 686 agtgcaacggcaagaa 701
Score = 46.1 bits (23), Expect = 0.005
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 616 ctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgct 674
|||||||||||||| ||||| | | ||||||||||||| || ||||||||||||||
Sbjct: 729 ctactacaagcagtactgccggcagctcggcgtcgaccccgggcccaacctcacctgct 787
>gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds
Length = 819
Score = 139 bits (70), Expect = 5e-031
Identities = 303/376 (80%), Gaps = 11/376 (2%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||| ||||||| | | | || |||||||||| | ||||||||
Sbjct: 366 caagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctgcta 425
Query: 274 catcaacgagatcgacgggccgagcaagaactactgcgaccggaacaacacgcagtggcc 333
||||| ||||||| || || ||| |||||||||| || ||||| |||||||||
Sbjct: 426 catcagcgagatcaac---aagaacaacgcctactgcgactcgagcaacaagcagtggcc 482
Query: 334 gtgccaggcggggaaggggtactacggccgcggcccgctgcagatctcctggaacttcaa 393
|||| ||||| || ||||||||| |||||||||||||| ||||| ||||||| |||
Sbjct: 483 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 542
Query: 394 ctacgggcccgcggggcagagcatcggcttcgacgggctgggcgaccccg-acgcggtgg 452
||||||||| || ||| || |||||||||| ||||||| |||| |||| || |||||
Sbjct: 543 ctacgggcctgccgggaaggccatcggcttcaacgggct-cgcgaacccgaacaaggtgg 601
Query: 453 cgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatgaacaacgtgcacg 512
||| ||||||| |||||||| | |||||||||||||||| ||||||||||||||
Sbjct: 602 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 661
Query: 513 gggccatcgtctccggccagggcttcggcgccaccatccgggccatcaacggcgcgctcg 572
||| || ||| | |||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 662 gggtgat-gtcgc-----aggggttcggcgccaccatcagggccatcaacggcgccctcg 715
Query: 573 agtgcgacggcaagaa 588
||||| ||||||||||
Sbjct: 716 agtgcaacggcaagaa 731
>gb|AW922735.1|AW922735 DG1_45_B06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 645
Score = 135 bits (68), Expect = 7e-030
Identities = 231/284 (81%), Gaps = 6/284 (2%)
Strand = Plus / Plus
Query: 305 tactgcgaccggaacaacacgcagtggccgtgccaggcggggaaggggtactacggccgc 364
||||||||| || ||||| ||||||||||||| ||||| || ||||||||| |||
Sbjct: 33 tactgcgactcgagcaacaagcagtggccgtgcgccgcgggacagaagtactacgggcgc 92
Query: 365 ggcccgctgcagatctcctggaacttcaactacgggcccgcggggcagagcatcggcttc 424
||||||||||| ||||| ||||||| |||||||||||| || ||| || ||||||||||
Sbjct: 93 ggcccgctgcaaatctcgtggaactacaactacgggcctgccgggaaggccatcggcttc 152
Query: 425 gacgggctgggcgaccccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcg 484
||||||| | |||| || |||||||| ||||||| |||||||| | |||
Sbjct: 153 aacgggctcgcaaacccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacggcg 212
Query: 485 ctctggtactggatgaacaacgtgcacggggccatcgtctccggccagggcttcggcgcc 544
||||||||||||| ||||||||||||||||| || ||| | |||| |||||||||
Sbjct: 213 ctctggtactggacgaacaacgtgcacggggtgat-gtcgc-----aggggttcggcgcc 266
Query: 545 accatccgggccatcaacggcgcgctcgagtgcgacggcaagaa 588
|||||| |||||||||||||||| ||||||||| ||||||||||
Sbjct: 267 accatcagggccatcaacggcgccctcgagtgcaacggcaagaa 310
>gb|CW150339.1|CW150339 104_549_11142974_116_36302_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142974, DNA
sequence
Length = 649
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Minus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 532 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 473
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 472 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 413
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 412 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 353
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 352 acaacgtgcacgggg 338
Score = 77.8 bits (39), Expect = 1e-012
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 616 ctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgct 674
|||||||||||||| ||||||| | ||||||||||||||||| | ||||||||||||||
Sbjct: 243 ctactacaagcagtactgccagcagttcggcgtcgacccggggagcaacctcacctgct 185
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| || |||||||||||| | ||||| |||||||| ||||||||| |||| || |||
Sbjct: 329 caggggtttggcgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaac 270
Query: 590 ccc 592
|||
Sbjct: 269 ccc 267
>gb|CW150340.1|CW150340 104_549_11142974_148_36301_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142974, DNA
sequence
Length = 708
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Plus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 471 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 530
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 531 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 590
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 591 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 650
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 651 acaacgtgcacgggg 665
Score = 52.0 bits (26), Expect = 8e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcg 239
||||||||||||||||||||||||||
Sbjct: 266 caagcgcgagatcgccgccttcttcg 291
>gb|CW318996.1|CW318996 104_811_11474252_116_35881_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474252, DNA
sequence
Length = 584
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Minus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 569 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 510
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 509 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 450
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 449 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 390
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 389 acaacgtgcacgggg 375
Score = 77.8 bits (39), Expect = 1e-012
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 616 ctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgct 674
|||||||||||||| ||||||| | ||||||||||||||||| | ||||||||||||||
Sbjct: 280 ctactacaagcagtactgccagcagttcggcgtcgacccggggagcaacctcacctgct 222
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| || |||||||||||| | ||||| |||||||| ||||||||| |||| || |||
Sbjct: 366 caggggtttggcgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaac 307
Query: 590 ccc 592
|||
Sbjct: 306 ccc 304
>gb|CW357974.1|CW357974 fsbb001f024n22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f024n22, DNA
sequence
Length = 686
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Minus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 682 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 623
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 622 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 563
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 562 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 503
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 502 acaacgtgcacgggg 488
Score = 77.8 bits (39), Expect = 1e-012
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 616 ctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgct 674
|||||||||||||| ||||||| | ||||||||||||||||| | ||||||||||||||
Sbjct: 393 ctactacaagcagtactgccagcagttcggcgtcgacccggggagcaacctcacctgct 335
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| || |||||||||||| | ||||| |||||||| ||||||||| |||| || |||
Sbjct: 479 caggggtttggcgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaac 420
Query: 590 ccc 592
|||
Sbjct: 419 ccc 417
>gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 737
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Plus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 185 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 244
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 245 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 304
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 305 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 364
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 365 acaacgtgcacgggg 379
Score = 77.8 bits (39), Expect = 1e-012
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 616 ctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgct 674
|||||||||||||| ||||||| | ||||||||||||||||| | ||||||||||||||
Sbjct: 474 ctactacaagcagtactgccagcagttcggcgtcgacccggggagcaacctcacctgct 532
Score = 58.0 bits (29), Expect = 1e-006
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||||||||||| |||||| ||||||||| | | ||||||||
Sbjct: 81 caagcgcgagatcgccgccttcttcgctcacgccacacacgagaccggacatttctgcta 140
Query: 274 catcaacgagatc 286
||| | |||||||
Sbjct: 141 cattagcgagatc 153
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| || |||||||||||| | ||||| |||||||| ||||||||| |||| || |||
Sbjct: 388 caggggtttggcgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaac 447
Query: 590 ccc 592
|||
Sbjct: 448 ccc 450
>gb|AW924229.1|AW924229 WS1_51_H04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 447
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Plus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 52 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 111
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 112 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 171
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 172 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 231
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 232 acaacgtgcacgggg 246
Score = 77.8 bits (39), Expect = 1e-012
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 616 ctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgct 674
|||||||||||||| ||||||| | ||||||||||||||||| | ||||||||||||||
Sbjct: 341 ctactacaagcagtactgccagcagttcggcgtcgacccggggagcaacctcacctgct 399
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| || |||||||||||| | ||||| |||||||| ||||||||| |||| || |||
Sbjct: 255 caggggtttggcgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaac 314
Query: 590 ccc 592
|||
Sbjct: 315 ccc 317
>gb|BE359997.1|BE359997 DG1_60_H07.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 486
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Plus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 16 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 75
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 76 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 135
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 136 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 195
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 196 acaacgtgcacgggg 210
Score = 77.8 bits (39), Expect = 1e-012
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 616 ctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgct 674
|||||||||||||| ||||||| | ||||||||||||||||| | ||||||||||||||
Sbjct: 305 ctactacaagcagtactgccagcagttcggcgtcgacccggggagcaacctcacctgct 363
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| || |||||||||||| | ||||| |||||||| ||||||||| |||| || |||
Sbjct: 219 caggggtttggcgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaac 278
Query: 590 ccc 592
|||
Sbjct: 279 ccc 281
>gb|BG556500.1|BG556500 EM1_37_H12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 441
Score = 133 bits (67), Expect = 3e-029
Identities = 223/271 (82%), Gaps = 8/271 (2%)
Strand = Plus / Plus
Query: 319 caacacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagat 378
||||| ||||||||||||| ||||| || ||||||||| |||||||||||||| ||
Sbjct: 4 caacaagcagtggccgtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaat 63
Query: 379 ctcctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcga 438
||| ||||||| |||||||||||| || ||| || |||||||||| ||||||| ||||
Sbjct: 64 ctcgtggaactacaactacgggcctgccgggaaggccatcggcttcaacgggct-cgcga 122
Query: 439 ccccg-acgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactgga 497
|||| || |||||||| ||||||| |||||||| | ||||||||||||||||
Sbjct: 123 acccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtactgga 182
Query: 498 tgaacaacgtgcacggggccatcgtctccggccagggcttcggcgccaccatccgggcca 557
||||||||||||||||| || ||| | |||| ||||||||||||||| ||||||
Sbjct: 183 cgaacaacgtgcacggggtgat-gtcgc-----aggggttcggcgccaccatcagggcca 236
Query: 558 tcaacggcgcgctcgagtgcgacggcaagaa 588
|||||||||| ||||||||| ||||||||||
Sbjct: 237 tcaacggcgccctcgagtgcaacggcaagaa 267
>gb|CD220455.1|CD220455 CCC1_67_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_F06_A007 3', mRNA sequence
Length = 594
Score = 133 bits (67), Expect = 3e-029
Identities = 223/271 (82%), Gaps = 8/271 (2%)
Strand = Plus / Plus
Query: 319 caacacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagat 378
||||| ||||||||||||| ||||| || ||||||||| |||||||||||||| ||
Sbjct: 10 caacaagcagtggccgtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaat 69
Query: 379 ctcctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcga 438
||| ||||||| |||||||||||| || ||| || |||||||||| ||||||| ||||
Sbjct: 70 ctcgtggaactacaactacgggcctgccgggaaggccatcggcttcaacgggct-cgcga 128
Query: 439 ccccg-acgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactgga 497
|||| || |||||||| ||||||| |||||||| | ||||||||||||||||
Sbjct: 129 acccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtactgga 188
Query: 498 tgaacaacgtgcacggggccatcgtctccggccagggcttcggcgccaccatccgggcca 557
||||||||||||||||| || ||| | |||| ||||||||||||||| ||||||
Sbjct: 189 cgaacaacgtgcacggggtgat-gtcgc-----aggggttcggcgccaccatcagggcca 242
Query: 558 tcaacggcgcgctcgagtgcgacggcaagaa 588
|||||||||| ||||||||| ||||||||||
Sbjct: 243 tcaacggcgccctcgagtgcaacggcaagaa 273
>gb|CD223269.1|CD223269 CCC1_27_E04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_27_E04_A007 3', mRNA sequence
Length = 605
Score = 133 bits (67), Expect = 3e-029
Identities = 223/271 (82%), Gaps = 8/271 (2%)
Strand = Plus / Plus
Query: 319 caacacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagat 378
||||| ||||||||||||| ||||| || ||||||||| |||||||||||||| ||
Sbjct: 3 caacaagcagtggccgtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaat 62
Query: 379 ctcctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcga 438
||| ||||||| |||||||||||| || ||| || |||||||||| ||||||| ||||
Sbjct: 63 ctcgtggaactacaactacgggcctgccgggaaggccatcggcttcaacgggct-cgcga 121
Query: 439 ccccg-acgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactgga 497
|||| || |||||||| ||||||| |||||||| | ||||||||||||||||
Sbjct: 122 acccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtactgga 181
Query: 498 tgaacaacgtgcacggggccatcgtctccggccagggcttcggcgccaccatccgggcca 557
||||||||||||||||| || ||| | |||| ||||||||||||||| ||||||
Sbjct: 182 cgaacaacgtgcacggggtgat-gtcgc-----aggggttcggcgccaccatcagggcca 235
Query: 558 tcaacggcgcgctcgagtgcgacggcaagaa 588
|||||||||| ||||||||| ||||||||||
Sbjct: 236 tcaacggcgccctcgagtgcaacggcaagaa 266
>gb|CD225586.1|CD225586 CCC1_40_H10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_40_H10_A007 3', mRNA sequence
Length = 526
Score = 133 bits (67), Expect = 3e-029
Identities = 223/271 (82%), Gaps = 8/271 (2%)
Strand = Plus / Plus
Query: 319 caacacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagat 378
||||| ||||||||||||| ||||| || ||||||||| |||||||||||||| ||
Sbjct: 5 caacaagcagtggccgtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaat 64
Query: 379 ctcctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcga 438
||| ||||||| |||||||||||| || ||| || |||||||||| ||||||| ||||
Sbjct: 65 ctcgtggaactacaactacgggcctgccgggaaggccatcggcttcaacgggct-cgcga 123
Query: 439 ccccg-acgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactgga 497
|||| || |||||||| ||||||| |||||||| | ||||||||||||||||
Sbjct: 124 acccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtactgga 183
Query: 498 tgaacaacgtgcacggggccatcgtctccggccagggcttcggcgccaccatccgggcca 557
||||||||||||||||| || ||| | |||| ||||||||||||||| ||||||
Sbjct: 184 cgaacaacgtgcacggggtgat-gtcgc-----aggggttcggcgccaccatcagggcca 237
Query: 558 tcaacggcgcgctcgagtgcgacggcaagaa 588
|||||||||| ||||||||| ||||||||||
Sbjct: 238 tcaacggcgccctcgagtgcaacggcaagaa 268
>gb|CD226496.1|CD226496 CCC1_46_E08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_46_E08_A007 3', mRNA sequence
Length = 617
Score = 133 bits (67), Expect = 3e-029
Identities = 223/271 (82%), Gaps = 8/271 (2%)
Strand = Plus / Plus
Query: 319 caacacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagat 378
||||| ||||||||||||| ||||| || ||||||||| |||||||||||||| ||
Sbjct: 3 caacaagcagtggccgtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaat 62
Query: 379 ctcctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcga 438
||| ||||||| |||||||||||| || ||| || |||||||||| ||||||| ||||
Sbjct: 63 ctcgtggaactacaactacgggcctgccgggaaggccatcggcttcaacgggct-cgcga 121
Query: 439 ccccg-acgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactgga 497
|||| || |||||||| ||||||| |||||||| | ||||||||||||||||
Sbjct: 122 acccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtactgga 181
Query: 498 tgaacaacgtgcacggggccatcgtctccggccagggcttcggcgccaccatccgggcca 557
||||||||||||||||| || ||| | |||| ||||||||||||||| ||||||
Sbjct: 182 cgaacaacgtgcacggggtgat-gtcgc-----aggggttcggcgccaccatcagggcca 235
Query: 558 tcaacggcgcgctcgagtgcgacggcaagaa 588
|||||||||| ||||||||| ||||||||||
Sbjct: 236 tcaacggcgccctcgagtgcaacggcaagaa 266
>gb|CD227859.1|CD227859 CCC1_56_F04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_F04_A007 3', mRNA sequence
Length = 622
Score = 133 bits (67), Expect = 3e-029
Identities = 223/271 (82%), Gaps = 8/271 (2%)
Strand = Plus / Plus
Query: 319 caacacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagat 378
||||| ||||||||||||| ||||| || ||||||||| |||||||||||||| ||
Sbjct: 3 caacaagcagtggccgtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaat 62
Query: 379 ctcctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcga 438
||| ||||||| |||||||||||| || ||| || |||||||||| ||||||| ||||
Sbjct: 63 ctcgtggaactacaactacgggcctgccgggaaggccatcggcttcaacgggct-cgcga 121
Query: 439 ccccg-acgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactgga 497
|||| || |||||||| ||||||| |||||||| | ||||||||||||||||
Sbjct: 122 acccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtactgga 181
Query: 498 tgaacaacgtgcacggggccatcgtctccggccagggcttcggcgccaccatccgggcca 557
||||||||||||||||| || ||| | |||| ||||||||||||||| ||||||
Sbjct: 182 cgaacaacgtgcacggggtgat-gtcgc-----aggggttcggcgccaccatcagggcca 235
Query: 558 tcaacggcgcgctcgagtgcgacggcaagaa 588
|||||||||| ||||||||| ||||||||||
Sbjct: 236 tcaacggcgccctcgagtgcaacggcaagaa 266
>gb|CD228687.1|CD228687 CCC1_9_D03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_9_D03_A007 3', mRNA sequence
Length = 621
Score = 133 bits (67), Expect = 3e-029
Identities = 223/271 (82%), Gaps = 8/271 (2%)
Strand = Plus / Plus
Query: 319 caacacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagat 378
||||| ||||||||||||| ||||| || ||||||||| |||||||||||||| ||
Sbjct: 3 caacaagcagtggccgtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaat 62
Query: 379 ctcctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcga 438
||| ||||||| |||||||||||| || ||| || |||||||||| ||||||| ||||
Sbjct: 63 ctcgtggaactacaactacgggcctgccgggaaggccatcggcttcaacgggct-cgcga 121
Query: 439 ccccg-acgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactgga 497
|||| || |||||||| ||||||| |||||||| | ||||||||||||||||
Sbjct: 122 acccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtactgga 181
Query: 498 tgaacaacgtgcacggggccatcgtctccggccagggcttcggcgccaccatccgggcca 557
||||||||||||||||| || ||| | |||| ||||||||||||||| ||||||
Sbjct: 182 cgaacaacgtgcacggggtgat-gtcgc-----aggggttcggcgccaccatcagggcca 235
Query: 558 tcaacggcgcgctcgagtgcgacggcaagaa 588
|||||||||| ||||||||| ||||||||||
Sbjct: 236 tcaacggcgccctcgagtgcaacggcaagaa 266
>gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_75_B02_A002 3', mRNA sequence
Length = 715
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Plus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 161 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 220
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 221 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 280
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 281 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 340
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 341 acaacgtgcacgggg 355
Score = 77.8 bits (39), Expect = 1e-012
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 616 ctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgct 674
|||||||||||||| ||||||| | ||||||||||||||||| | ||||||||||||||
Sbjct: 450 ctactacaagcagtactgccagcagttcggcgtcgacccggggagcaacctcacctgct 508
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| || |||||||||||| | ||||| |||||||| ||||||||| |||| || |||
Sbjct: 364 caggggtttggcgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaac 423
Query: 590 ccc 592
|||
Sbjct: 424 ccc 426
Score = 44.1 bits (22), Expect = 0.020
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgcc-ttcttcggcaacgccaaccacgagaccataaagttctgct 272
||||||||||||||||||| ||||||| |||||| ||||||||| | | |||||||
Sbjct: 56 caagcgcgagatcgccgccgttcttcgctcacgccacacacgagaccggacatttctgct 115
Query: 273 acatcaacgagatc 286
|||| | |||||||
Sbjct: 116 acattagcgagatc 129
>gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_16_C10_A002 3', mRNA sequence
Length = 714
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Plus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 313 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 372
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 373 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 432
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 433 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 492
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 493 acaacgtgcacgggg 507
Score = 77.8 bits (39), Expect = 1e-012
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 616 ctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgct 674
|||||||||||||| ||||||| | ||||||||||||||||| | ||||||||||||||
Sbjct: 602 ctactacaagcagtactgccagcagttcggcgtcgacccggggagcaacctcacctgct 660
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| || |||||||||||| | ||||| |||||||| ||||||||| |||| || |||
Sbjct: 516 caggggtttggcgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaac 575
Query: 590 ccc 592
|||
Sbjct: 576 ccc 578
Score = 50.1 bits (25), Expect = 3e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
||||||||||||||||||||| |||| |||||| ||||||||| | | ||||||||
Sbjct: 209 caagcgcgagatcgccgcctttttcgctcacgccacacacgagaccggacatttctgcta 268
Query: 274 catcaacgagatc 286
||| | |||||||
Sbjct: 269 cattagcgagatc 281
>gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_E12_A002 3', mRNA sequence
Length = 722
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Plus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 163 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 222
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 223 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 282
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 283 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 342
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 343 acaacgtgcacgggg 357
Score = 77.8 bits (39), Expect = 1e-012
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 616 ctactacaagcagttctgccaggatttcggcgtcgacccgggcaacaacctcacctgct 674
|||||||||||||| ||||||| | ||||||||||||||||| | ||||||||||||||
Sbjct: 452 ctactacaagcagtactgccagcagttcggcgtcgacccggggagcaacctcacctgct 510
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 530 cagggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaac 589
||||| || |||||||||||| | ||||| |||||||| ||||||||| |||| || |||
Sbjct: 366 caggggtttggcgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaac 425
Query: 590 ccc 592
|||
Sbjct: 426 ccc 428
Score = 50.1 bits (25), Expect = 3e-004
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
||||||||||||||||||||| |||| |||||| ||||||||| | | ||||||||
Sbjct: 59 caagcgcgagatcgccgcctttttcgctcacgccacacacgagaccggacatttctgcta 118
Query: 274 catcaacgagatc 286
||| | |||||||
Sbjct: 119 cattagcgagatc 131
>gb|CX613534.1|CX613534 GABR1_8_E12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_E12_A002 5', mRNA sequence
Length = 773
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Plus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 548 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 607
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 608 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 667
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 668 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 727
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 728 acaacgtgcacgggg 742
Score = 58.0 bits (29), Expect = 1e-006
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||||||||||| |||||| ||||||||| | | ||||||||
Sbjct: 444 caagcgcgagatcgccgccttcttcgctcacgccacacacgagaccggacatttctgcta 503
Query: 274 catcaacgagatc 286
||| | |||||||
Sbjct: 504 cattagcgagatc 516
>gb|CX616381.1|CX616381 GABR1_27_C09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_27_C09_A002 5', mRNA sequence
Length = 742
Score = 133 bits (67), Expect = 3e-029
Identities = 163/195 (83%)
Strand = Plus / Plus
Query: 321 acacgcagtggccgtgccaggcggggaaggggtactacggccgcggcccgctgcagatct 380
|||| |||||||||||| |||||| || ||||||||| | ||||| ||||||||||
Sbjct: 548 acacacagtggccgtgcgccgcggggcagaagtactacggaagaggccccctgcagatct 607
Query: 381 cctggaacttcaactacgggcccgcggggcagagcatcggcttcgacgggctgggcgacc 440
| ||||||| |||||||||||| || || ||||||||||||||||||||||| || |||
Sbjct: 608 cgtggaactacaactacgggccggcaggacagagcatcggcttcgacgggctcgggaacc 667
Query: 441 ccgacgcggtggcgcgcagcgccgtgctcgcgttccgctccgcgctctggtactggatga 500
| ||||| ||||||| ||||||| |||||||| | |||||||||| ||||||||
Sbjct: 668 cggacgccgtggcgcaggacgccgtgatcgcgttcaaggcggcgctctggttctggatga 727
Query: 501 acaacgtgcacgggg 515
|||||||||||||||
Sbjct: 728 acaacgtgcacgggg 742
Score = 58.0 bits (29), Expect = 1e-006
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 214 caagcgcgagatcgccgccttcttcggcaacgccaaccacgagaccataaagttctgcta 273
|||||||||||||||||||||||||| |||||| ||||||||| | | ||||||||
Sbjct: 444 caagcgcgagatcgccgccttcttcgctcacgccacacacgagaccggacatttctgcta 503
Query: 274 catcaacgagatc 286
||| | |||||||
Sbjct: 504 cattagcgagatc 516
>gb|CW098317.1|CW098317 104_464_11002941_148_34366_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002941, DNA
sequence
Length = 422
Score = 131 bits (66), Expect = 1e-028
Identities = 198/238 (83%), Gaps = 8/238 (3%)
Strand = Plus / Minus
Query: 352 gtactacggccgcggcccgctgcagatctcctggaacttcaactacgggcccgcggggca 411
||||||||| |||||||||||||| ||||| ||||||| |||||||||||| || ||| |
Sbjct: 395 gtactacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggaa 336
Query: 412 gagcatcggcttcgacgggctgggcgaccccg-acgcggtggcgcgcagcgccgtgctcg 470
| |||||||||| ||||||| |||| |||| || |||||||| ||||||| |||
Sbjct: 335 ggccatcggcttcaacgggct-cgcgaacccgaacaaggtggcgcaggacgccgtgatcg 277
Query: 471 cgttccgctccgcgctctggtactggatgaacaacgtgcacggggccatcgtctccggcc 530
||||| | |||||||||||||||| ||||||||||||||||| || ||| |
Sbjct: 276 cgttcaagacggcgctctggtactggacgaacaacgtgcacggggtgat-gtcgc----- 223
Query: 531 agggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaa 588
|||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||
Sbjct: 222 aggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaa 165
>gb|CD224145.1|CD224145 CCC1_32_A09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_A09_A007 3', mRNA sequence
Length = 622
Score = 131 bits (66), Expect = 1e-028
Identities = 198/238 (83%), Gaps = 8/238 (3%)
Strand = Plus / Plus
Query: 352 gtactacggccgcggcccgctgcagatctcctggaacttcaactacgggcccgcggggca 411
||||||||| |||||||||||||| ||||| ||||||| |||||||||||| || ||| |
Sbjct: 36 gtactacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggaa 95
Query: 412 gagcatcggcttcgacgggctgggcgaccccg-acgcggtggcgcgcagcgccgtgctcg 470
| |||||||||| ||||||| |||| |||| || |||||||| ||||||| |||
Sbjct: 96 ggccatcggcttcaacgggct-cgcgaacccgaacaaggtggcgcaggacgccgtgatcg 154
Query: 471 cgttccgctccgcgctctggtactggatgaacaacgtgcacggggccatcgtctccggcc 530
||||| | |||||||||||||||| ||||||||||||||||| || ||| |
Sbjct: 155 cgttcaagacggcgctctggtactggacgaacaacgtgcacggggtgat-gtcgc----- 208
Query: 531 agggcttcggcgccaccatccgggccatcaacggcgcgctcgagtgcgacggcaagaa 588
|||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||
Sbjct: 209 aggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaa 266
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 342,137
Number of Sequences: 832831
Number of extensions: 342137
Number of successful extensions: 96239
Number of sequences better than 0.5: 256
Number of HSP's better than 0.5 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95143
Number of HSP's gapped (non-prelim): 891
length of query: 833
length of database: 491,359,669
effective HSP length: 20
effective length of query: 813
effective length of database: 474,703,049
effective search space: 385933578837
effective search space used: 385933578837
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)