BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 44956.2.1
(1252 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX618718.1|CX618718 GABR1_41_F07.b1_A002 GA- or brassino... 979 0.0
gb|CN124015.1|CN124015 RHOH1_2_C05.b1_A002 Acid- and alkali... 565 e-159
gb|CN134568.1|CN134568 OX1_27_D10.b1_A002 Oxidatively-stres... 385 e-105
gb|CN134655.1|CN134655 OX1_27_D10.g1_A002 Oxidatively-stres... 303 2e-080
gb|CN133947.1|CN133947 OX1_19_G01.b1_A002 Oxidatively-stres... 299 3e-079
gb|CW235927.1|CW235927 104_691_11215305_148_37401_037 Sorgh... 236 4e-060
gb|CL153422.1|CL153422 104_337_10780704_116_31368_336 Sorgh... 143 4e-032
gb|CW060427.1|CW060427 104_303_10519847_1_30042 Sorghum met... 103 4e-020
gb|CW060428.1|CW060428 104_303_10519847_5_30087 Sorghum met... 103 4e-020
gb|CW377063.1|CW377063 fsbb001f055d13f0 Sorghum methylation... 103 4e-020
gb|CW377064.1|CW377064 fsbb001f055d13k0 Sorghum methylation... 103 4e-020
gb|BZ351920.1|BZ351920 hm74e02.g1 WGS-SbicolorF (JM107 adap... 92 1e-016
gb|CL195984.1|CL195984 104_421_10942758_116_32313_017 Sorgh... 58 2e-006
gb|CW075960.1|CW075960 104_364_10809945_114_31802_009 Sorgh... 58 2e-006
gb|CF482713.1|CF482713 POL1_8_E03.g1_A002 Pollen Sorghum bi... 52 1e-004
gb|CW053738.1|CW053738 104_294_10516142_115_30183 Sorghum m... 48 0.002
gb|CW295218.1|CW295218 104_776_11460814_116_35619_089 Sorgh... 46 0.008
gb|AW563301.1|AW563301 LG1_228_D04.g1_A002 Light Grown 1 (L... 46 0.008
gb|CL192920.1|CL192920 104_416_10940586_114_32268_077 Sorgh... 42 0.12
gb|CW143144.1|CW143144 104_534_11137252_116_34949_002 Sorgh... 42 0.12
gb|CW200461.1|CW200461 104_626_11184072_116_36868_096 Sorgh... 42 0.12
gb|CW200462.1|CW200462 104_626_11184072_148_36867_096 Sorgh... 42 0.12
gb|CW249163.1|CW249163 104_710_11222697_116_35037_033 Sorgh... 42 0.12
gb|CW249164.1|CW249164 104_710_11222697_148_35033_033 Sorgh... 42 0.12
gb|CW360483.1|CW360483 fsbb001f028j11k0 Sorghum methylation... 42 0.12
gb|BE593384.1|BE593384 WS1_97_B11.b1_A002 Water-stressed 1 ... 42 0.12
gb|CD207586.1|CD207586 HS1_33_F01.g1_A012 Heat-shocked seed... 42 0.12
gb|CD427488.1|CD427488 SA1_30_E03.g1_A002 Salicylic acid-tr... 42 0.12
gb|CN125907.1|CN125907 RHOH1_14_C06.b1_A002 Acid- and alkal... 42 0.12
gb|CN126254.1|CN126254 RHOH1_16_C06.b1_A002 Acid- and alkal... 42 0.12
gb|CN138830.1|CN138830 OX1_14_E11.b1_A002 Oxidatively-stres... 42 0.12
gb|BZ367293.1|BZ367293 id03e12.b1 WGS-SbicolorF (JM107 adap... 40 0.48
gb|BZ367294.1|BZ367294 id03e12.g1 WGS-SbicolorF (JM107 adap... 40 0.48
gb|BZ626000.1|BZ626000 ih42d04.g1 WGS-SbicolorF (DH5a methy... 40 0.48
gb|CL154599.1|CL154599 104_340_10781527_116_31470_007 Sorgh... 40 0.48
gb|CL703005.1|CL703005 SP__Ba0091M14.f SP__Ba Sorghum propi... 40 0.48
gb|CW038442.1|CW038442 104_270_10504929_114_30385 Sorghum m... 40 0.48
gb|CW064412.1|CW064412 104_310_10522553_115_30146 Sorghum m... 40 0.48
gb|CW072274.1|CW072274 104_325_10592175_114_30535 Sorghum m... 40 0.48
gb|CW087606.1|CW087606 104_432_10947730_114_32553_043 Sorgh... 40 0.48
gb|CW087607.1|CW087607 104_432_10947730_116_32557_043 Sorgh... 40 0.48
gb|CW218352.1|CW218352 104_652_11196147_148_37529_016 Sorgh... 40 0.48
gb|CW249100.1|CW249100 104_710_11222662_116_35038_083 Sorgh... 40 0.48
gb|CW277260.1|CW277260 104_751_11405930_148_35416_011 Sorgh... 40 0.48
gb|CW314880.1|CW314880 104_805_11472061_148_35819_051 Sorgh... 40 0.48
gb|CW317806.1|CW317806 104_809_11473609_148_35865_003 Sorgh... 40 0.48
gb|CW323958.1|CW323958 104_818_11476904_148_35907_026 Sorgh... 40 0.48
gb|CW336470.1|CW336470 104_835_11483607_116_36096_052 Sorgh... 40 0.48
gb|CW448687.1|CW448687 fsbb001f182h03k0 Sorghum methylation... 40 0.48
gb|CW459904.1|CW459904 fsbb001f206o02f0 Sorghum methylation... 40 0.48
gb|CW461073.1|CW461073 fsbb001f208j04k0 Sorghum methylation... 40 0.48
gb|CW461986.1|CW461986 fsbb001f209o11f0 Sorghum methylation... 40 0.48
gb|CW482067.1|CW482067 fsbb001f241p12f0 Sorghum methylation... 40 0.48
gb|CW489944.1|CW489944 fsbb001f275c11k0 Sorghum methylation... 40 0.48
gb|BG053756.1|BG053756 RHIZ2_9_D04.b1_A003 Rhizome2 (RHIZ2)... 40 0.48
gb|BM324604.1|BM324604 PIC1_33_C08.b1_A002 Pathogen-infecte... 40 0.48
gb|CN127205.1|CN127205 RHOH1_21_D09.g3_A002 Acid- and alkal... 40 0.48
gb|CN134103.1|CN134103 OX1_20_F09.b1_A002 Oxidatively-stres... 40 0.48
gb|CN134183.1|CN134183 OX1_20_F09.g1_A002 Oxidatively-stres... 40 0.48
gb|CX607957.1|CX607957 ANR1_31_F09.g1_A002 Anaerobic roots ... 40 0.48
gb|CX613824.1|CX613824 GABR1_10_A01.g1_A002 GA- or brassino... 40 0.48
gb|CX615898.1|CX615898 GABR1_24_A09.g1_A002 GA- or brassino... 40 0.48
>gb|CX618718.1|CX618718 GABR1_41_F07.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_41_F07_A002 3', mRNA sequence
Length = 645
Score = 979 bits (494), Expect = 0.0
Identities = 607/642 (94%), Gaps = 7/642 (1%)
Strand = Plus / Minus
Query: 70 gatttattaccagagagtattacaaagaaagagacaacactaattt-gttgtccaaaatc 128
|||||||| |||| |||||||||||||| |||||||| ||||||| |||||||||||||
Sbjct: 639 gatttattcccagtgagtattacaaagacagagacaaacctaattttgttgtccaaaatc 580
Query: 129 gcccgtgcacaacaagggtgttcaa---cattaaatgctcagcaaaagtagaagtgcatc 185
|||||||||||| ||| || ||| ||||||||| | ||||||||||||||| ||||
Sbjct: 579 gcccgtgcacaa---gggagtacaataccattaaatgttaagcaaaagtagaagtacatc 523
Query: 186 aagctaactcaaatcttacattaccatccctccgtcaattgtaagcacctgtccagtcat 245
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 522 aagctaactcaaatcttacattaccatccctccatcaattgtaagcacctgtccggtcat 463
Query: 246 atagctagctgcggggttaagggccaggaactcgaccaaccctgcaacttcctctggttg 305
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 462 atagctagctgcggggttaagggccaggaactcgactagccctgcaacttcctctggttg 403
Query: 306 gccatatctccctaacggaatggttgacaagattttcttctcaagctcttctccaagttc 365
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gccgtatctccctaatggaatggttgacaagattttcttctcaagctcttctccaagttc 343
Query: 366 ggcagtcatatcagatgcaatgaaccctggtgcaatagcattcacattgatatttctgct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ggcagtcatatcagatgcaatgaaccctggtgcaatagcattcacattgatatttctgct 283
Query: 426 tgcatactccctggcaactgtttttgtgaaaccaatcactccagccttggctgcgctata 485
|||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 282 tgcatactccctggcaactgttttcgtgaaaccaatcaccccagccttggctgcactata 223
Query: 486 attagcttggccaacattgccagtaagaccaactacagatgcaatgttgataatttttcc 545
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 222 attagcttggccaacattgccagtaaggccaacaacagatgcaatgttgataatttttcc 163
Query: 546 ctttctctttttcatcattacttttgttgcagcctgtgtacaaaggaagacaccagtaag 605
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 162 ctttttctttttcatcattacttttgttgcagcctgtgtacacaggaagacacctgtaag 103
Query: 606 attcagatcaattacgtcttgccactgagatttcttcatcctcatcaacaatgtgtctcg 665
||| ||||||||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 102 attgagatcaattacatcttgccactgagatttcttcatcctcatcaataacgtgtctcg 43
Query: 666 tgtaatccctgcattatttaccagcacatctattgttcccca 707
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tgtaatccctgcattatttaccagcacatctattgttcccca 1
>gb|CN124015.1|CN124015 RHOH1_2_C05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_C05_A002 3', mRNA sequence
Length = 450
Score = 565 bits (285), Expect = e-159
Identities = 401/437 (91%), Gaps = 7/437 (1%)
Strand = Plus / Minus
Query: 70 gatttattaccagagagtattacaaagaaagagacaacactaattt-gttgtccaaaatc 128
|||||||| || | |||||||||||||| ||||| | ||||||| |||||||||||||
Sbjct: 434 gatttattccccgtgagtattacaaagaccgagaccaacctaattttgttgtccaaaatc 375
Query: 129 gcccgtgcacaacaagggtgttcaaca---ttaaatgctcagcaaaagtagaagtgcatc 185
|||||||||||| ||| || ||| | ||||||| | ||||||||||||||| ||||
Sbjct: 374 gcccgtgcacaa---gggagtacaatacccttaaatgttaagcaaaagtagaagtacatc 318
Query: 186 aagctaactcaaatcttacattaccatccctccgtcaattgtaagcacctgtccagtcat 245
||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||
Sbjct: 317 aagctaactcaaatcttacattaccatccctccatcaattgtaagcacctgtccgggcat 258
Query: 246 atagctagctgcggggttaagggccaggaactcgaccaaccctgcaacttcctctggttg 305
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 257 atagctagctgcggggttaagggccaggaactcgaatagccctgcaacttcctctggttg 198
Query: 306 gccatatctccctaacggaatggttgacaagattttcttctcaagctcttctccaagttc 365
| | ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 197 ggcgtatctccctaatggaatggttgacaagattttcttctcaagctcttctcccagttc 138
Query: 366 ggcagtcatatcagatgcaatgaaccctggtgcaatagcattcacattgatatttctgct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ggcagtcatatcagatgcaatgaaccctggtgcaatagcattcacattgatatttctgct 78
Query: 426 tgcatactccctggcaactgtttttgtgaaaccaatcactccagccttggctgcgctata 485
|||||||||||||| ||||||||| |||||||||||||| |||||||||||||| ||| |
Sbjct: 77 tgcatactccctgggaactgttttcgtgaaaccaatcaccccagccttggctgcactaaa 18
Query: 486 attagcttggccaacat 502
|||||||||||||||||
Sbjct: 17 attagcttggccaacat 1
>gb|CN134568.1|CN134568 OX1_27_D10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_D10_A002 3', mRNA sequence
Length = 818
Score = 385 bits (194), Expect = e-105
Identities = 512/618 (82%)
Strand = Plus / Minus
Query: 201 ttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcggg 260
|||||||||||||||||| || || || || ||||||||||| || ||||| || || ||
Sbjct: 621 ttacattaccatccctccatcgatggtgaggacctgtccagtgatgtagcttgcagctgg 562
Query: 261 gttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctccctaa 320
| | ||||| | ||| || |||| ||||| || |||||||| | ||||| | ||||||
Sbjct: 561 gctgagggctaagaattccaccagacctgctacatcctctggccgaccataccgccctaa 502
Query: 321 cggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcaga 380
||||| | ||||| ||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 501 gggaatagctgacagaattttcttctctagctcttctccaagttcagcagtcatatctga 442
Query: 381 tgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctggc 440
|||||| || || || || ||| | || |||| ||||||||||| ||||||||||| ||
Sbjct: 441 tgcaataaagccaggagcgataacgtttgcattaatatttctgctggcatactccctagc 382
Query: 441 aactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaac 500
||||||||| ||||| ||||| || ||||||||||| || |||||||| || ||| |
Sbjct: 381 aactgttttcgtgaacccaataaccccagccttggcagcagcgtaattagcctgtccagc 322
Query: 501 attgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttcat 560
|||||| || | |||||| || ||||| |||||||||||| |||||||| |||| |||||
Sbjct: 321 attgccggttaaaccaacaaccgatgctatgttgataattcttccctttttcttcttcat 262
Query: 561 cattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaattac 620
||||||||||||||||||||| || |||||||| || || |||||||||| |||||| ||
Sbjct: 261 cattacttttgttgcagcctgcgtgcaaaggaaaacgcctgtaagattcaaatcaatcac 202
Query: 621 gtcttgccactgagatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcatt 680
|||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||| ||
Sbjct: 201 atcttgccattgcgatttcttcattctcatcaacaatgtgtcccgtgtgattcctgcgtt 142
Query: 681 atttaccagcacatctattgttccccatttatctagagctgctttcatcatagactctac 740
||||| |||||||| || ||||||||| |||| | ||| ||| |||||||| || ||
Sbjct: 141 gtttactagcacatcaatggttccccatgtatcaacagccatttttatcatagattcaac 82
Query: 741 atcagcttcttttgaaacatctcctccgaaggtgatagcctcaccaccagatgcttcaat 800
|||||| ||||| |||||||||||||| ||||| || |||| || || |||||||||||
Sbjct: 81 atcagcctctttggaaacatctcctccaaaggtaatggcctggcctccggatgcttcaat 22
Query: 801 ctctttggagacctcttc 818
||| || ||||| |||||
Sbjct: 21 ctcctttgagacttcttc 4
>gb|CN134655.1|CN134655 OX1_27_D10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_D10_A002 5', mRNA sequence
Length = 748
Score = 303 bits (153), Expect = 2e-080
Identities = 381/457 (83%)
Strand = Plus / Minus
Query: 484 taattagcttggccaacattgccagtaagaccaactacagatgcaatgttgataattttt 543
|||||||| || ||| ||||||| || | |||||| || ||||| |||||||||||| ||
Sbjct: 739 taattagcctgtccagcattgccggttaaaccaacaaccgatgctatgttgataattctt 680
Query: 544 ccctttctctttttcatcattacttttgttgcagcctgtgtacaaaggaagacaccagta 603
|||||| |||| |||||||||||||||||||||||||| || |||||||| || || |||
Sbjct: 679 ccctttttcttcttcatcattacttttgttgcagcctgcgtgcaaaggaaaacgcctgta 620
Query: 604 agattcagatcaattacgtcttgccactgagatttcttcatcctcatcaacaatgtgtct 663
||||||| |||||| || |||||||| || ||||||||||| |||||||||||||||||
Sbjct: 619 agattcaaatcaatcacatcttgccattgcgatttcttcattctcatcaacaatgtgtcc 560
Query: 664 cgtgtaatccctgcattatttaccagcacatctattgttccccatttatctagagctgct 723
||||| || ||||| || ||||| |||||||| || ||||||||| |||| | ||| |
Sbjct: 559 cgtgtgattcctgcgttgtttactagcacatcaatggttccccatgtatcaacagccatt 500
Query: 724 ttcatcatagactctacatcagcttcttttgaaacatctcctccgaaggtgatagcctca 783
|| |||||||| || |||||||| ||||| |||||||||||||| ||||| || ||||
Sbjct: 499 tttatcatagattcaacatcagcctctttggaaacatctcctccaaaggtaatggcctgg 440
Query: 784 ccaccagatgcttcaatctctttggagacctcttcagcctctttcgaggaccgggcatag 843
|| || |||||||||||||| || ||||| ||||| ||||| || || || ||||||||
Sbjct: 439 cctccggatgcttcaatctcctttgagacttcttcggcctcctttgaagatcgggcataa 380
Query: 844 tttaccagaaccttgcatcctgcttttccaagggctagagcagttgccttaccaatccct 903
|| |||| |||||||| |||||||||||||| || | ||||| || || ||||||||
Sbjct: 379 ttcaccaagaccttgcagcctgcttttccaagagccaatgcagtggcttttccaatcccc 320
Query: 904 ctagatgcacctgtaacaacaacaactggagcttcca 940
|| || ||||| ||||||||||| || ||| ||||||
Sbjct: 319 ctggaagcaccagtaacaacaaccacaggaccttcca 283
>gb|CN133947.1|CN133947 OX1_19_G01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_19_G01_A002 3', mRNA sequence
Length = 643
Score = 299 bits (151), Expect = 3e-079
Identities = 379/455 (83%)
Strand = Plus / Minus
Query: 201 ttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcggg 260
|||||||||||||||||| || || || || ||||||||||| || ||||| || || ||
Sbjct: 455 ttacattaccatccctccatcgatggtgaggacctgtccagtgatgtagcttgcagctgg 396
Query: 261 gttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctccctaa 320
| | ||||| | ||| || |||| ||||| || |||||||| | ||||||| ||||||
Sbjct: 395 gctgagggctaagaattccaccagacctgctacatcctctggccgaccatatcgccctaa 336
Query: 321 cggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcaga 380
||||| | ||||| ||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 335 gggaatagctgacagaattttcttctctagctcttctccaagttcagcagtcatatctga 276
Query: 381 tgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctggc 440
|||||| || || || || ||| | || |||| ||||||||||| ||||||||||| ||
Sbjct: 275 tgcaataaagccaggagcgataacgtttgcattaatatttctgctggcatactccctagc 216
Query: 441 aactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaac 500
||||||||| ||||| ||||| || ||||||||||| || |||||||| || ||| |
Sbjct: 215 aactgttttcgtgaacccaataaccccagccttggcagcagcgtaattagcctgtccagc 156
Query: 501 attgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttcat 560
|||||| || | |||||| || ||||| |||||||||||| |||||||| |||| |||||
Sbjct: 155 attgccggttaaaccaacaaccgatgctatgttgataattcttccctttttcttcttcat 96
Query: 561 cattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaattac 620
||||||||||||||||||||| || |||||||| || || |||||||||| |||||| ||
Sbjct: 95 cattacttttgttgcagcctgcgtgcaaaggaaaacgcctgtaagattcaaatcaatcac 36
Query: 621 gtcttgccactgagatttcttcatcctcatcaaca 655
|||||||| || ||||||||||| ||||||||||
Sbjct: 35 atcttgccattgcgatttcttcattctcatcaaca 1
>gb|CW235927.1|CW235927 104_691_11215305_148_37401_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215305, DNA
sequence
Length = 716
Score = 236 bits (119), Expect = 4e-060
Identities = 134/139 (96%)
Strand = Plus / Minus
Query: 409 acattgatatttctgcttgcatactccctggcaactgtttttgtgaaaccaatcactcca 468
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 587 acattgatatttctgcttgcatactccctggcaactgttttcgtgaaaccaatcacccca 528
Query: 469 gccttggctgcgctataattagcttggccaacattgccagtaagaccaactacagatgca 528
||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 527 gccttggctgcactataattagcttggccaacattgccagtaaggccaacaacagatgca 468
Query: 529 atgttgataatttttccct 547
|||||||||||||||||||
Sbjct: 467 atgttgataatttttccct 449
Score = 93.7 bits (47), Expect = 4e-017
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 364 tcggcagtcatatcagatgcaatgaaccctggtgcaatagcattcac 410
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tcggcagtcatatcagatgcaatgaaccctggtgcaatagcattcac 670
>gb|CL153422.1|CL153422 104_337_10780704_116_31368_336 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10780704, DNA
sequence
Length = 706
Score = 143 bits (72), Expect = 4e-032
Identities = 84/88 (95%)
Strand = Plus / Minus
Query: 231 cacctgtccagtcatatagctagctgcggggttaagggccaggaactcgaccaaccctgc 290
||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 513 cacctgtccggtcatatagctagctgcggggttaagggccaggaactcgactagccctgc 454
Query: 291 aacttcctctggttggccatatctccct 318
|||||||||||||||||| |||||||||
Sbjct: 453 aacttcctctggttggccgtatctccct 426
Score = 137 bits (69), Expect = 3e-030
Identities = 109/121 (90%), Gaps = 6/121 (4%)
Strand = Plus / Minus
Query: 119 gtccaaaatcgcccgtgcacaacaagggtgttcaa---cattaaatgctcagcaaaagta 175
|||||||||||||||||||||| ||| || ||| ||||||||| | ||||||||||
Sbjct: 706 gtccaaaatcgcccgtgcacaa---gggagtacaataccattaaatgttaagcaaaagta 650
Query: 176 gaagtgcatcaagctaactcaaatcttacattaccatccctccgtcaattgtaagcacct 235
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 649 gaagtacatcaagctaactcaaatcttacattaccatccctccatcaattgtaagcacct 590
Query: 236 g 236
|
Sbjct: 589 g 589
>gb|CW060427.1|CW060427 104_303_10519847_1_30042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519847, DNA
sequence
Length = 609
Score = 103 bits (52), Expect = 4e-020
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 801 ctctttggagacctcttcagcctctttcgaggaccgggcatagtttaccagaacct 856
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 398 ctctttggagacctcttcagcctctttcgaggaccgggcatagttaaccagaacct 343
>gb|CW060428.1|CW060428 104_303_10519847_5_30087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519847, DNA
sequence
Length = 533
Score = 103 bits (52), Expect = 4e-020
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 801 ctctttggagacctcttcagcctctttcgaggaccgggcatagtttaccagaacct 856
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 326 ctctttggagacctcttcagcctctttcgaggaccgggcatagttaaccagaacct 381
>gb|CW377063.1|CW377063 fsbb001f055d13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f055d13, DNA
sequence
Length = 667
Score = 103 bits (52), Expect = 4e-020
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 801 ctctttggagacctcttcagcctctttcgaggaccgggcatagtttaccagaacct 856
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 531 ctctttggagacctcttcagcctctttcgaggaccgggcatagttaaccagaacct 586
>gb|CW377064.1|CW377064 fsbb001f055d13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f055d13, DNA
sequence
Length = 730
Score = 103 bits (52), Expect = 4e-020
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 801 ctctttggagacctcttcagcctctttcgaggaccgggcatagtttaccagaacct 856
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 548 ctctttggagacctcttcagcctctttcgaggaccgggcatagttaaccagaacct 493
>gb|BZ351920.1|BZ351920 hm74e02.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hm74e02 5', DNA sequence
Length = 437
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Minus
Query: 407 tcacattgatatttctgcttgcatactccctggcaactgtttttgtgaaaccaatcactc 466
||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| || |
Sbjct: 138 tcacattaatatttctgctggcatactccctagcaactgttttcgtgaacccaataaccc 79
Query: 467 cagccttggctgcgctataattagcttggccaacattgccagtaagaccaactacagatg 526
|||||||||| || |||||||| || || ||||||| || | |||||| || ||||
Sbjct: 78 cagccttggcagcagcgtaattagcctgctcagcattgccggttaaaccaacaaccgatg 19
Query: 527 caatgttgataatt 540
| ||||||||||||
Sbjct: 18 ctatgttgataatt 5
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 316 cctaacggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcata 375
||||| ||||| | ||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 312 cctaagggaatagctgacagaattttcttctctagctcttctccaagttcagcagtcata 253
Query: 376 tcagatgcaat 386
|| ||||||||
Sbjct: 252 tctgatgcaat 242
>gb|CL195984.1|CL195984 104_421_10942758_116_32313_017 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942758, DNA
sequence
Length = 673
Score = 58.0 bits (29), Expect = 2e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 852 aaccttgcatcctgcttttccaagggctagagcagttgccttaccaatccctctagatgc 911
||||||||| |||||||||||||| || | ||||| || || |||||||| || || ||
Sbjct: 204 aaccttgcagcctgcttttccaagagccaatgcagtggcttttccaatccccctggaagc 145
Query: 912 acctgtaacaacaacaactggagcttcca 940
||| ||||||||||| || ||| ||||||
Sbjct: 144 accagtaacaacaaccacaggaccttcca 116
>gb|CW075960.1|CW075960 104_364_10809945_114_31802_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809945, DNA
sequence
Length = 743
Score = 58.0 bits (29), Expect = 2e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 852 aaccttgcatcctgcttttccaagggctagagcagttgccttaccaatccctctagatgc 911
||||||||| |||||||||||||| || | ||||| || || |||||||| || || ||
Sbjct: 166 aaccttgcagcctgcttttccaagagccaatgcagtggcttttccaatccccctggaagc 107
Query: 912 acctgtaacaacaacaactggagcttcca 940
||| ||||||||||| || ||| ||||||
Sbjct: 106 accagtaacaacaaccacaggaccttcca 78
>gb|CF482713.1|CF482713 POL1_8_E03.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_8_E03_A002 5', mRNA sequence
Length = 712
Score = 52.0 bits (26), Expect = 1e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 622 tcttgccactgagatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcatta 681
||||||||||| | |||||||||| ||||| || | ||| |||||||||||||||||
Sbjct: 564 tcttgccactgggtcttcttcatccgcatcagcagcgcgtcacgtgtaatccctgcattg 505
Query: 682 tttaccagcacatc 695
|| ||||| |||||
Sbjct: 504 ttcaccaggacatc 491
>gb|CW053738.1|CW053738 104_294_10516142_115_30183 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516142, DNA
sequence
Length = 275
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1068 ccggcgggaggcggcggcggcccc 1091
||||||||||||||||||||||||
Sbjct: 134 ccggcgggaggcggcggcggcccc 111
>gb|CW295218.1|CW295218 104_776_11460814_116_35619_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11460814, DNA
sequence
Length = 502
Score = 46.1 bits (23), Expect = 0.008
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1118 ctgctgctgctacggtggcggcggcgg 1144
||||||||||| |||||||||||||||
Sbjct: 255 ctgctgctgctgcggtggcggcggcgg 229
>gb|AW563301.1|AW563301 LG1_228_D04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 642
Score = 46.1 bits (23), Expect = 0.008
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1118 ctgctgctgctacggtggcggcggcgg 1144
||||||||||| |||||||||||||||
Sbjct: 254 ctgctgctgctgcggtggcggcggcgg 228
>gb|CL192920.1|CL192920 104_416_10940586_114_32268_077 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10940586, DNA
sequence
Length = 414
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1074 ggaggcggcggcggccccggc 1094
|||||||||||||||||||||
Sbjct: 148 ggaggcggcggcggccccggc 128
>gb|CW143144.1|CW143144 104_534_11137252_116_34949_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137252, DNA
sequence
Length = 607
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 792 tgcttcaatctctttggagac 812
|||||||||||||||||||||
Sbjct: 445 tgcttcaatctctttggagac 425
>gb|CW200461.1|CW200461 104_626_11184072_116_36868_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184072, DNA
sequence
Length = 718
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 792 tgcttcaatctctttggagac 812
|||||||||||||||||||||
Sbjct: 539 tgcttcaatctctttggagac 519
>gb|CW200462.1|CW200462 104_626_11184072_148_36867_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184072, DNA
sequence
Length = 673
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 792 tgcttcaatctctttggagac 812
|||||||||||||||||||||
Sbjct: 608 tgcttcaatctctttggagac 628
>gb|CW249163.1|CW249163 104_710_11222697_116_35037_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222697, DNA
sequence
Length = 590
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1068 ccggcgggaggcggcggcggccccggcgc 1096
|||||| |||||||||||||||| |||||
Sbjct: 428 ccggcgtgaggcggcggcggcccgggcgc 400
>gb|CW249164.1|CW249164 104_710_11222697_148_35033_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222697, DNA
sequence
Length = 591
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1068 ccggcgggaggcggcggcggccccggcgc 1096
|||||| |||||||||||||||| |||||
Sbjct: 387 ccggcgtgaggcggcggcggcccgggcgc 415
>gb|CW360483.1|CW360483 fsbb001f028j11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f028j11, DNA
sequence
Length = 719
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 792 tgcttcaatctctttggagac 812
|||||||||||||||||||||
Sbjct: 145 tgcttcaatctctttggagac 125
>gb|BE593384.1|BE593384 WS1_97_B11.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 334
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1068 ccggcgggaggcggcggcggccccggcgc 1096
|||||| |||||||||||||||| |||||
Sbjct: 152 ccggcgtgaggcggcggcggcccgggcgc 180
>gb|CD207586.1|CD207586 HS1_33_F01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_33_F01_A012 5', mRNA sequence
Length = 635
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1074 ggaggcggcggcggccccggc 1094
|||||||||||||||||||||
Sbjct: 485 ggaggcggcggcggccccggc 505
>gb|CD427488.1|CD427488 SA1_30_E03.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_30_E03_A002 5', mRNA sequence
Length = 675
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1074 ggaggcggcggcggccccggc 1094
|||||||||||||||||||||
Sbjct: 472 ggaggcggcggcggccccggc 492
>gb|CN125907.1|CN125907 RHOH1_14_C06.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_14_C06_A002 3', mRNA sequence
Length = 727
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1110 ggaggagactgctgctgctac 1130
|||||||||||||||||||||
Sbjct: 476 ggaggagactgctgctgctac 456
>gb|CN126254.1|CN126254 RHOH1_16_C06.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_16_C06_A002 3', mRNA sequence
Length = 781
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1110 ggaggagactgctgctgctac 1130
|||||||||||||||||||||
Sbjct: 530 ggaggagactgctgctgctac 510
>gb|CN138830.1|CN138830 OX1_14_E11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_14_E11_A002 3', mRNA sequence
Length = 763
Score = 42.1 bits (21), Expect = 0.12
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1126 gctacggtggcggcggcggtggcca 1150
||||||||||||||||||| |||||
Sbjct: 348 gctacggtggcggcggcggcggcca 372
>gb|BZ367293.1|BZ367293 id03e12.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id03e12 5', DNA sequence
Length = 500
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 793 gcttcaatctctttggagac 812
||||||||||||||||||||
Sbjct: 472 gcttcaatctctttggagac 453
>gb|BZ367294.1|BZ367294 id03e12.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id03e12 5', DNA sequence
Length = 500
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 793 gcttcaatctctttggagac 812
||||||||||||||||||||
Sbjct: 34 gcttcaatctctttggagac 53
>gb|BZ626000.1|BZ626000 ih42d04.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih42d04 5', DNA sequence
Length = 510
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1130 cggtggcggcggcggtggcc 1149
||||||||||||||||||||
Sbjct: 284 cggtggcggcggcggtggcc 303
>gb|CL154599.1|CL154599 104_340_10781527_116_31470_007 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781527, DNA
sequence
Length = 734
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 540 ttttccctttctctttttca 559
||||||||||||||||||||
Sbjct: 40 ttttccctttctctttttca 59
>gb|CL703005.1|CL703005 SP__Ba0091M14.f SP__Ba Sorghum propinquum genomic clone
SP__Ba0091M14 5', DNA sequence
Length = 200
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 792 tgcttcaatctctttggaga 811
||||||||||||||||||||
Sbjct: 178 tgcttcaatctctttggaga 159
>gb|CW038442.1|CW038442 104_270_10504929_114_30385 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504929, DNA
sequence
Length = 482
Score = 40.1 bits (20), Expect = 0.48
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1121 ctgctgctacggtggcggcggcgg 1144
|||||||| |||||||||||||||
Sbjct: 129 ctgctgctgcggtggcggcggcgg 106
>gb|CW064412.1|CW064412 104_310_10522553_115_30146 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522553, DNA
sequence
Length = 388
Score = 40.1 bits (20), Expect = 0.48
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1072 cgggaggcggcggcggccccggcg 1095
||||| ||||||||||||||||||
Sbjct: 364 cgggacgcggcggcggccccggcg 387
>gb|CW072274.1|CW072274 104_325_10592175_114_30535 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592175, DNA
sequence
Length = 665
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1077 ggcggcggcggccccggcgc 1096
||||||||||||||||||||
Sbjct: 52 ggcggcggcggccccggcgc 71
>gb|CW087606.1|CW087606 104_432_10947730_114_32553_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947730, DNA
sequence
Length = 732
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1077 ggcggcggcggccccggcgc 1096
||||||||||||||||||||
Sbjct: 645 ggcggcggcggccccggcgc 626
>gb|CW087607.1|CW087607 104_432_10947730_116_32557_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947730, DNA
sequence
Length = 693
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1077 ggcggcggcggccccggcgc 1096
||||||||||||||||||||
Sbjct: 582 ggcggcggcggccccggcgc 601
>gb|CW218352.1|CW218352 104_652_11196147_148_37529_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196147, DNA
sequence
Length = 490
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1077 ggcggcggcggccccggcgc 1096
||||||||||||||||||||
Sbjct: 303 ggcggcggcggccccggcgc 284
>gb|CW249100.1|CW249100 104_710_11222662_116_35038_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222662, DNA
sequence
Length = 616
Score = 40.1 bits (20), Expect = 0.48
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1170 gaaggagccgaagaggaggcggga 1193
|||||||||||||||||| |||||
Sbjct: 589 gaaggagccgaagaggagacggga 612
>gb|CW277260.1|CW277260 104_751_11405930_148_35416_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405930, DNA
sequence
Length = 201
Score = 40.1 bits (20), Expect = 0.48
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1072 cgggaggcggcggcggccccggcg 1095
||||| ||||||||||||||||||
Sbjct: 126 cgggacgcggcggcggccccggcg 103
>gb|CW314880.1|CW314880 104_805_11472061_148_35819_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472061, DNA
sequence
Length = 644
Score = 40.1 bits (20), Expect = 0.48
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1118 ctgctgctgctacggtggcggcggcggtggcc 1149
||||||||||| ||| ||||||||||| ||||
Sbjct: 522 ctgctgctgctgcggcggcggcggcggaggcc 553
>gb|CW317806.1|CW317806 104_809_11473609_148_35865_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473609, DNA
sequence
Length = 571
Score = 40.1 bits (20), Expect = 0.48
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1121 ctgctgctacggtggcggcggcgg 1144
|||||||| |||||||||||||||
Sbjct: 30 ctgctgctgcggtggcggcggcgg 7
>gb|CW323958.1|CW323958 104_818_11476904_148_35907_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476904, DNA
sequence
Length = 712
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1077 ggcggcggcggccccggcgc 1096
||||||||||||||||||||
Sbjct: 481 ggcggcggcggccccggcgc 500
>gb|CW336470.1|CW336470 104_835_11483607_116_36096_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483607, DNA
sequence
Length = 636
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 540 ttttccctttctctttttca 559
||||||||||||||||||||
Sbjct: 27 ttttccctttctctttttca 46
>gb|CW448687.1|CW448687 fsbb001f182h03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182h03, DNA
sequence
Length = 703
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 793 gcttcaatctctttggagac 812
||||||||||||||||||||
Sbjct: 103 gcttcaatctctttggagac 84
>gb|CW459904.1|CW459904 fsbb001f206o02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f206o02, DNA
sequence
Length = 622
Score = 40.1 bits (20), Expect = 0.48
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 793 gcttcaatctctttggagac 812
||||||||||||||||||||
Sbjct: 410 gcttcaatctctttggagac 429
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 586,890
Number of Sequences: 832831
Number of extensions: 586890
Number of successful extensions: 195887
Number of sequences better than 0.5: 63
Number of HSP's better than 0.5 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 195721
Number of HSP's gapped (non-prelim): 159
length of query: 1252
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1232
effective length of database: 474,703,049
effective search space: 584834156368
effective search space used: 584834156368
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)