BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3838024.2.1
(529 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE358216.1|BE358216 DG1_26_F09.b2_A002 Dark Grown 1 (DG1... 632 e-180
gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkal... 632 e-180
gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots ... 632 e-180
gb|CX616082.1|CX616082 GABR1_25_F01.g1_A002 GA- or brassino... 632 e-180
gb|CF429999.1|CF429999 PH1_25_F09.g1_A002 Phosphorous-defic... 628 e-178
gb|CD236044.1|CD236044 SS1_25_C10.g1_A012 Salt-stressed see... 624 e-177
gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves... 624 e-177
gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots ... 624 e-177
gb|CX610800.1|CX610800 ANR1_20_H05.g1_A002 Anaerobic roots ... 617 e-175
gb|BE359862.1|BE359862 DG1_58_G02.b2_A002 Dark Grown 1 (DG1... 599 e-169
gb|CN151800.1|CN151800 WOUND1_77_E10.g1_A002 Wounded leaves... 579 e-163
gb|BM317539.1|BM317539 LG1_332_H05.b9_A002 Light Grown 1 (L... 533 e-150
gb|BE354980.1|BE354980 DG1_10_F11.b1_A002 Dark Grown 1 (DG1... 472 e-131
gb|CF428925.1|CF428925 PH1_18_D09.g1_A002 Phosphorous-defic... 422 e-116
gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassino... 422 e-116
gb|AW922606.1|AW922606 DG1_46_D12.b1_A002 Dark Grown 1 (DG1... 418 e-115
gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stres... 414 e-114
gb|CW166039.1|CW166039 104_574_11152832_116_36481_022 Sorgh... 345 3e-093
gb|CW201321.1|CW201321 104_627_11184511_116_37109_030 Sorgh... 345 3e-093
gb|CW201322.1|CW201322 104_627_11184511_148_37110_030 Sorgh... 345 3e-093
gb|CW289114.1|CW289114 104_767_11412305_116_35541_065 Sorgh... 345 3e-093
gb|CW325952.1|CW325952 104_821_11477963_116_36062_046 Sorgh... 345 3e-093
gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (L... 339 2e-091
gb|BE361634.1|BE361634 DG1_81_C01.b1_A002 Dark Grown 1 (DG1... 339 2e-091
gb|BG357198.1|BG357198 OV2_11_A05.b1_A002 Ovary 2 (OV2) Sor... 339 2e-091
gb|BG557476.1|BG557476 EM1_44_F08.b1_A002 Embryo 1 (EM1) So... 339 2e-091
gb|BG102815.1|BG102815 RHIZ2_33_G06.b1_A003 Rhizome2 (RHIZ2... 327 6e-088
gb|CW325953.1|CW325953 104_821_11477963_148_36063_046 Sorgh... 321 4e-086
gb|CF429532.1|CF429532 PH1_22_C12.g1_A002 Phosphorous-defic... 321 4e-086
gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorgh... 293 8e-078
gb|CF427844.1|CF427844 PH1_11_F08.b1_A002 Phosphorous-defic... 293 8e-078
gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methy... 285 2e-075
gb|CW130174.1|CW130174 104_512_11114967_116_34770_056 Sorgh... 285 2e-075
gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorgh... 285 2e-075
gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation... 285 2e-075
gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorgh... 281 3e-074
gb|AW283870.1|AW283870 LG1_260_H01.g1_A002 Light Grown 1 (L... 281 3e-074
gb|BG560670.1|BG560670 RHIZ2_58_C08.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BF422262.1|BF422262 FM1_13_B11.b1_A003 Floral-Induced Me... 262 3e-068
gb|CD226724.1|CD226724 CCC1_47_H10.g1_A007 Callus culture/c... 262 3e-068
gb|BE125256.1|BE125256 DG1_18_D01.b1_A002 Dark Grown 1 (DG1... 260 1e-067
gb|CD428137.1|CD428137 ETH1_32_H05.g1_A002 Ethylene-treated... 250 1e-064
gb|CW219580.1|CW219580 104_653_11196859_116_37141_068 Sorgh... 246 2e-063
gb|CF431052.1|CF431052 NIT1_4_H09.g1_A002 Nitrogen-deficien... 236 2e-060
gb|BG560219.1|BG560219 RHIZ2_71_E10.b1_A003 Rhizome2 (RHIZ2... 218 4e-055
gb|CW415288.1|CW415288 fsbb001f115f07f0 Sorghum methylation... 216 2e-054
gb|CW457603.1|CW457603 fsbb001f203h22k0 Sorghum methylation... 216 2e-054
gb|CN143916.1|CN143916 WOUND1_19_D07.b1_A002 Wounded leaves... 167 1e-039
gb|CL148238.1|CL148238 104_328_10592951_116_31783_075 Sorgh... 153 2e-035
gb|CW063399.1|CW063399 104_309_10521981_115_30140 Sorghum m... 143 2e-032
gb|CW130175.1|CW130175 104_512_11114967_148_34774_056 Sorgh... 143 2e-032
gb|CW292510.1|CW292510 104_772_11414127_116_35577_054 Sorgh... 143 2e-032
gb|CW292511.1|CW292511 104_772_11414127_148_35581_054 Sorgh... 143 2e-032
gb|CW063398.1|CW063398 104_309_10521981_114_30134 Sorghum m... 127 1e-027
gb|CW064790.1|CW064790 104_311_10522768_114_30122 Sorghum m... 96 4e-018
gb|CW301137.1|CW301137 104_784_11464043_116_36253_034 Sorgh... 92 6e-017
gb|CX609326.1|CX609326 ANR1_12_B05.b1_A002 Anaerobic roots ... 92 6e-017
gb|CN131128.1|CN131128 RHOH1_46_C04.b1_A002 Acid- and alkal... 90 2e-016
gb|BI140973.1|BI140973 IP1_41_F02.b1_A002 Immature pannicle... 86 4e-015
gb|CL177479.1|CL177479 104_384_10893857_116_31916_305 Sorgh... 84 1e-014
gb|CW044997.1|CW044997 104_281_10509293_114_30236 Sorghum m... 84 1e-014
gb|AW677106.1|AW677106 DG1_4_H09.b1_A002 Dark Grown 1 (DG1)... 82 6e-014
gb|CX609201.1|CX609201 ANR1_11_F09.b1_A002 Anaerobic roots ... 80 2e-013
gb|CL183147.1|CL183147 104_395_10897985_116_31918_209 Sorgh... 76 4e-012
gb|CW128842.1|CW128842 104_510_11114239_116_34758_022 Sorgh... 76 4e-012
gb|CW497689.1|CW497689 fsbb001f290j02k0 Sorghum methylation... 76 4e-012
gb|BZ333054.1|BZ333054 hx32e04.b1 WGS-SbicolorF (JM107 adap... 72 6e-011
gb|CW117366.1|CW117366 104_493_11107618_148_34613_041 Sorgh... 72 6e-011
gb|CW173021.1|CW173021 104_584_11156617_148_36546_007 Sorgh... 72 6e-011
gb|CW393419.1|CW393419 fsbb001f080h11k0 Sorghum methylation... 72 6e-011
gb|CD429366.1|CD429366 ETH1_4_E12.b1_A002 Ethylene-treated ... 72 6e-011
gb|CD429502.1|CD429502 ETH1_4_E12.g1_A002 Ethylene-treated ... 72 6e-011
gb|CL177480.1|CL177480 104_384_10893857_148_31915_305 Sorgh... 68 9e-010
gb|CL154550.1|CL154550 104_339_10781491_114_31371_355 Sorgh... 66 3e-009
gb|CL154551.1|CL154551 104_339_10781491_116_31372_355 Sorgh... 66 3e-009
gb|CW032387.1|CW032387 104_261_10501349_114_30363 Sorghum m... 66 3e-009
gb|CW171233.1|CW171233 104_581_11155631_116_36521_082 Sorgh... 66 3e-009
gb|CW183379.1|CW183379 104_599_11164586_148_36677_011 Sorgh... 66 3e-009
gb|CW236276.1|CW236276 104_692_11215531_116_37501_078 Sorgh... 66 3e-009
gb|CW360230.1|CW360230 fsbb001f028d16f0 Sorghum methylation... 66 3e-009
gb|CW465154.1|CW465154 fsbb001f215m11f0 Sorghum methylation... 66 3e-009
gb|CW370183.1|CW370183 fsbb001f044p12k0 Sorghum methylation... 62 5e-008
gb|CW396733.1|CW396733 fsbb001f085f03f0 Sorghum methylation... 62 5e-008
gb|CN125727.1|CN125727 RHOH1_12_H07.g1_A002 Acid- and alkal... 62 5e-008
gb|CL171167.1|CL171167 104_372_10889229_148_31778_285 Sorgh... 58 9e-007
gb|CL183819.1|CL183819 104_396_10898428_114_31923_268 Sorgh... 58 9e-007
gb|CW178657.1|CW178657 104_592_11159684_116_36620_072 Sorgh... 58 9e-007
gb|CW183688.1|CW183688 104_599_11164747_148_36676_070 Sorgh... 58 9e-007
gb|CW215159.1|CW215159 104_647_11194395_116_37165_010 Sorgh... 58 9e-007
gb|CW369263.1|CW369263 fsbb001f043j14f0 Sorghum methylation... 58 9e-007
gb|CW417037.1|CW417037 fsbb001f117n19f0 Sorghum methylation... 58 9e-007
gb|BI075202.1|BI075202 IP1_17_D05.b1_A002 Immature pannicle... 58 9e-007
gb|CD211845.1|CD211845 HS1_64_C08.g1_A012 Heat-shocked seed... 58 9e-007
gb|CD225014.1|CD225014 CCC1_37_D01.g1_A007 Callus culture/c... 58 9e-007
gb|CD229214.1|CD229214 CCC1_13_B02.g1_A007 Callus culture/c... 58 9e-007
gb|CF427438.1|CF427438 PH1_1_H06.g1_A002 Phosphorous-defici... 58 9e-007
gb|CF433664.1|CF433664 NIT1_28_D06.g1_A002 Nitrogen-deficie... 58 9e-007
gb|CN136100.1|CN136100 OX1_40_F12.g1_A002 Oxidatively-stres... 58 9e-007
gb|CN136666.1|CN136666 OX1_44_D01.g1_A002 Oxidatively-stres... 58 9e-007
gb|CN141940.1|CN141940 WOUND1_2_G05.g1_A002 Wounded leaves ... 58 9e-007
gb|CL165468.1|CL165468 104_360_10808639_114_31818_239 Sorgh... 56 3e-006
gb|CW138453.1|CW138453 104_528_11134704_116_34891_094 Sorgh... 56 3e-006
gb|CW207390.1|CW207390 104_636_11188111_148_36969_024 Sorgh... 56 3e-006
gb|CW262595.1|CW262595 104_730_11230163_116_35225_044 Sorgh... 56 3e-006
gb|CW262596.1|CW262596 104_730_11230163_148_35221_044 Sorgh... 56 3e-006
gb|AW922665.1|AW922665 DG1_45_C01.b1_A002 Dark Grown 1 (DG1... 56 3e-006
gb|CD227647.1|CD227647 CCC1_52_D04.g1_A007 Callus culture/c... 56 3e-006
gb|CW360174.1|CW360174 fsbb001f028c08k0 Sorghum methylation... 54 1e-005
gb|CD231870.1|CD231870 SS1_30_G08.g1_A012 Salt-stressed see... 54 1e-005
gb|CD236653.1|CD236653 SS1_35_H04.g1_A012 Salt-stressed see... 54 1e-005
gb|CX622346.1|CX622346 GABR1_63_A06.g2_A002 GA- or brassino... 54 1e-005
gb|AW677089.1|AW677089 DG1_4_B10.b1_A002 Dark Grown 1 (DG1)... 52 5e-005
gb|CD213004.1|CD213004 HS1_17_C02.g1_A012 Heat-shocked seed... 52 5e-005
gb|CW034966.1|CW034966 104_265_10502869_114_30378 Sorghum m... 50 2e-004
gb|CW053111.1|CW053111 104_293_10515781_114_30184 Sorghum m... 50 2e-004
gb|CW055609.1|CW055609 104_297_10517224_115_30173 Sorghum m... 50 2e-004
gb|CW111252.1|CW111252 104_484_11104205_116_34531_023 Sorgh... 50 2e-004
gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorgh... 50 2e-004
gb|CW253378.1|CW253378 104_717_11225053_116_35110_063 Sorgh... 50 2e-004
gb|CW253379.1|CW253379 104_717_11225053_148_35106_063 Sorgh... 50 2e-004
gb|CW281372.1|CW281372 104_757_11408141_116_35463_031 Sorgh... 50 2e-004
gb|CW281373.1|CW281373 104_757_11408141_148_35459_031 Sorgh... 50 2e-004
gb|CW355876.1|CW355876 fsbb001f020l09k0 Sorghum methylation... 50 2e-004
gb|AW286094.2|AW286094 LG1_261_C11.b1_A002 Light Grown 1 (L... 50 2e-004
gb|AW286780.2|AW286780 LG1_206_D03.b1_A002 Light Grown 1 (L... 50 2e-004
gb|AW286797.2|AW286797 LG1_206_E11.b1_A002 Light Grown 1 (L... 50 2e-004
gb|AW286800.2|AW286800 LG1_206_F03.b1_A002 Light Grown 1 (L... 50 2e-004
gb|AW672522.1|AW672522 LG1_360_D12.b1_A002 Light Grown 1 (L... 50 2e-004
gb|BE356684.1|BE356684 DG1_12_C08.b1_A002 Dark Grown 1 (DG1... 50 2e-004
gb|BE367582.1|BE367582 PI1_9_H05.b1_A002 Pathogen induced 1... 50 2e-004
gb|BG649569.1|BG649569 RHIZ2_81_H11.b1_A003 Rhizome2 (RHIZ2... 50 2e-004
gb|CD204116.1|CD204116 HS1_3_F11.g1_A012 Heat-shocked seedl... 50 2e-004
gb|CD206117.1|CD206117 HS1_20_F09.g1_A012 Heat-shocked seed... 50 2e-004
gb|CD207433.1|CD207433 HS1_65_F03.g1_A012 Heat-shocked seed... 50 2e-004
gb|CD211530.1|CD211530 HS1_60_G11.g1_A012 Heat-shocked seed... 50 2e-004
gb|CN142828.1|CN142828 WOUND1_12_B12.g1_A002 Wounded leaves... 50 2e-004
gb|CN146506.1|CN146506 WOUND1_41_D07.g1_A002 Wounded leaves... 50 2e-004
gb|CN147743.1|CN147743 WOUND1_51_G03.g1_A002 Wounded leaves... 50 2e-004
gb|CX618587.1|CX618587 GABR1_40_B04.g1_A002 GA- or brassino... 50 2e-004
gb|CX621324.1|CX621324 GABR1_57_A12.g1_A002 GA- or brassino... 50 2e-004
gb|BZ780402.1|BZ780402 ii39f06.g1 WGS-SbicolorF (DH5a methy... 48 8e-004
gb|CL165204.1|CL165204 104_360_10808428_116_31819_028 Sorgh... 48 8e-004
gb|CW105399.1|CW105399 104_474_11012877_116_34452_085 Sorgh... 48 8e-004
gb|CW165329.1|CW165329 104_573_11152448_116_36469_022 Sorgh... 48 8e-004
gb|CW169284.1|CW169284 104_579_11154593_116_36499_075 Sorgh... 48 8e-004
gb|CW392542.1|CW392542 fsbb001f079d12f0 Sorghum methylation... 48 8e-004
gb|BZ779778.1|BZ779778 ii34e07.b1 WGS-SbicolorF (DH5a methy... 46 0.003
gb|CL157537.1|CL157537 104_345_10783651_116_31478_211 Sorgh... 46 0.003
gb|CL163760.1|CL163760 104_357_10807385_114_31812_137 Sorgh... 46 0.003
gb|CL197332.1|CL197332 104_424_10943679_116_32337_060 Sorgh... 46 0.003
gb|CW266820.1|CW266820 104_736_11232639_148_35285_052 Sorgh... 46 0.003
gb|CW304769.1|CW304769 104_789_11465956_148_35706_002 Sorgh... 46 0.003
gb|CW307219.1|CW307219 104_795_11468026_116_36059_043 Sorgh... 46 0.003
gb|CW307220.1|CW307220 104_795_11468026_148_36060_043 Sorgh... 46 0.003
gb|CW410294.1|CW410294 fsbb001f104p18f0 Sorghum methylation... 46 0.003
gb|CW428703.1|CW428703 fsbb001f141j01f0 Sorghum methylation... 46 0.003
gb|CW442061.1|CW442061 fsbb001f161i13f0 Sorghum methylation... 46 0.003
gb|CW448024.1|CW448024 fsbb001f181g24k0 Sorghum methylation... 46 0.003
gb|BE125048.1|BE125048 DG1_14_A04.b1_A002 Dark Grown 1 (DG1... 46 0.003
gb|BE357742.1|BE357742 DG1_22_E09.b1_A002 Dark Grown 1 (DG1... 46 0.003
gb|BE917935.1|BE917935 OV1_7_H07.b1_A002 Ovary 1 (OV1) Sorg... 46 0.003
gb|BF481712.1|BF481712 FM1_21_D12.b1_A003 Floral-Induced Me... 46 0.003
gb|BG159192.1|BG159192 RHIZ2_27_D08.b1_A003 Rhizome2 (RHIZ2... 46 0.003
gb|BG947120.1|BG947120 IP1_2_G11.b1_A002 Immature pannicle ... 46 0.003
gb|BI211382.1|BI211382 IP1_60_A09.b1_A002 Immature pannicle... 46 0.003
gb|BG355724.2|BG355724 EM1_18_F11.b1_A002 Embryo 1 (EM1) So... 46 0.003
gb|CD211809.1|CD211809 HS1_64_B07.g1_A012 Heat-shocked seed... 46 0.003
gb|CD211843.1|CD211843 HS1_64_D02.g1_A012 Heat-shocked seed... 46 0.003
gb|CD213565.1|CD213565 HS1_41_D06.g1_A012 Heat-shocked seed... 46 0.003
gb|CN139539.1|CN139539 OX1_22_E01.g1_A002 Oxidatively-stres... 46 0.003
gb|CN149618.1|CN149618 WOUND1_63_H04.g1_A002 Wounded leaves... 46 0.003
gb|CL163761.1|CL163761 104_357_10807385_116_31813_137 Sorgh... 44 0.013
gb|CW045087.1|CW045087 104_281_10509350_114_30237 Sorghum m... 44 0.013
gb|CW075171.1|CW075171 104_355_10806807_114_31832_327 Sorgh... 44 0.013
gb|CW163521.1|CW163521 104_571_11151505_148_36454_011 Sorgh... 44 0.013
gb|CW175933.1|CW175933 104_588_11158217_116_36578_069 Sorgh... 44 0.013
gb|CW221899.1|CW221899 104_657_11202092_116_37451_078 Sorgh... 44 0.013
gb|CW360173.1|CW360173 fsbb001f028c08f0 Sorghum methylation... 44 0.013
gb|CW375801.1|CW375801 fsbb001f053f12f0 Sorghum methylation... 44 0.013
gb|CW382994.1|CW382994 fsbb001f065e16k0 Sorghum methylation... 44 0.013
gb|CW396734.1|CW396734 fsbb001f085f03k0 Sorghum methylation... 44 0.013
gb|CW489176.1|CW489176 fsbb001f265p08f0 Sorghum methylation... 44 0.013
gb|CW493542.1|CW493542 fsbb001f284f17k0 Sorghum methylation... 44 0.013
gb|BE125160.1|BE125160 DG1_13_H08.b1_A002 Dark Grown 1 (DG1... 44 0.013
gb|BE125857.1|BE125857 DG1_58_G02.b1_A002 Dark Grown 1 (DG1... 44 0.013
gb|BE357377.1|BE357377 DG1_15_B01.b2_A002 Dark Grown 1 (DG1... 44 0.013
gb|BE362052.1|BE362052 DG1_84_F03.b1_A002 Dark Grown 1 (DG1... 44 0.013
gb|BE367581.1|BE367581 PI1_9_H06.b1_A002 Pathogen induced 1... 44 0.013
gb|BG487539.1|BG487539 EM1_67_C06.b1_A002 Embryo 1 (EM1) So... 44 0.013
gb|CD235748.1|CD235748 SS1_37_G03.g1_A012 Salt-stressed see... 44 0.013
gb|CD235780.1|CD235780 SS1_37_G02.g1_A012 Salt-stressed see... 44 0.013
gb|CX616548.1|CX616548 GABR1_28_C07.g1_A002 GA- or brassino... 44 0.013
gb|CL164386.1|CL164386 104_358_10807871_116_31815_239 Sorgh... 42 0.051
gb|CW107151.1|CW107151 104_477_11096411_148_34470_044 Sorgh... 42 0.051
gb|CW110080.1|CW110080 104_482_11103487_148_34515_022 Sorgh... 42 0.051
gb|CW142382.1|CW142382 104_533_11136827_116_34936_036 Sorgh... 42 0.051
gb|CW497688.1|CW497688 fsbb001f290j02f0 Sorghum methylation... 42 0.051
gb|BF704669.1|BF704669 FM1_50_A06.b1_A003 Floral-Induced Me... 42 0.051
gb|BG488141.1|BG488141 RHIZ2_60_A07.b1_A003 Rhizome2 (RHIZ2... 42 0.051
gb|BG488213.1|BG488213 RHIZ2_60_H06.b1_A003 Rhizome2 (RHIZ2... 42 0.051
gb|BG558372.1|BG558372 RHIZ2_66_E05.b1_A003 Rhizome2 (RHIZ2... 42 0.051
gb|BG558405.1|BG558405 RHIZ2_67_A09.b1_A003 Rhizome2 (RHIZ2... 42 0.051
gb|BG559301.1|BG559301 RHIZ2_53_B08.b1_A003 Rhizome2 (RHIZ2... 42 0.051
gb|BG560213.1|BG560213 RHIZ2_73_A07.b1_A003 Rhizome2 (RHIZ2... 42 0.051
gb|CW219058.1|CW219058 104_652_11196517_116_37460_049 Sorgh... 40 0.20
gb|CW426513.1|CW426513 fsbb001f137p03f0 Sorghum methylation... 40 0.20
gb|BE355801.1|BE355801 DG1_11_E05.b1_A002 Dark Grown 1 (DG1... 40 0.20
gb|CD204106.1|CD204106 HS1_3_A03.g1_A012 Heat-shocked seedl... 40 0.20
gb|CN139961.1|CN139961 OX1_33_E06.b1_A002 Oxidatively-stres... 40 0.20
gb|CN151725.1|CN151725 WOUND1_77_E10.b1_A002 Wounded leaves... 40 0.20
>gb|BE358216.1|BE358216 DG1_26_F09.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 624
Score = 632 bits (319), Expect = e-180
Identities = 441/481 (91%), Gaps = 3/481 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 95 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 154
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 155 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 214
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 215 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 274
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 275 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 334
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 335 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 394
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 395 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggtgg 454
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 455 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 514
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 528
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggttcgacccggccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 574
Query: 529 t 529
|
Sbjct: 575 t 575
>gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_C04_A002 5', mRNA sequence
Length = 806
Score = 632 bits (319), Expect = e-180
Identities = 441/481 (91%), Gaps = 3/481 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 90 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 149
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 150 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 209
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 210 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 269
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 270 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 329
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 330 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 389
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 390 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggtgg 449
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 450 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 509
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 528
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ggttcgacccggccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 569
Query: 529 t 529
|
Sbjct: 570 t 570
>gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_12_B05_A002 5', mRNA sequence
Length = 826
Score = 632 bits (319), Expect = e-180
Identities = 441/481 (91%), Gaps = 3/481 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 88 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 147
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 148 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 207
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 208 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 267
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 268 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 327
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 328 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 387
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 388 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggtgg 447
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 448 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 507
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 528
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ggttcgacccggccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 567
Query: 529 t 529
|
Sbjct: 568 t 568
>gb|CX616082.1|CX616082 GABR1_25_F01.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_25_F01_A002 5', mRNA sequence
Length = 643
Score = 632 bits (319), Expect = e-180
Identities = 441/481 (91%), Gaps = 3/481 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 82 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 141
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 142 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 201
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 202 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 261
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 262 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 321
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 322 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 381
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 382 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggtgg 441
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 442 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 501
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 528
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggttcgacccggccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 561
Query: 529 t 529
|
Sbjct: 562 t 562
>gb|CF429999.1|CF429999 PH1_25_F09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_F09_A002 5', mRNA sequence
Length = 764
Score = 628 bits (317), Expect = e-178
Identities = 439/479 (91%), Gaps = 3/479 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 96 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 155
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 156 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 215
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 216 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 275
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 276 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 335
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 336 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 395
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 396 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggtgg 455
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 456 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 515
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaacatc 527
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggttcgacccggccgccgactaccacacctacaccatcatctggaacccgaccaacatc 574
>gb|CD236044.1|CD236044 SS1_25_C10.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_25_C10_A012 5', mRNA sequence
Length = 681
Score = 624 bits (315), Expect = e-177
Identities = 440/481 (91%), Gaps = 3/481 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 102 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 161
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 162 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 221
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 222 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 281
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 282 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 341
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 342 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 401
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 402 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggtgg 461
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 462 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 521
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 528
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 522 ggttcgacccggccgccgactaccacacctacaccatcgtctggaacccgaccaacatcc 581
Query: 529 t 529
|
Sbjct: 582 t 582
>gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_D07_A002 5', mRNA sequence
Length = 804
Score = 624 bits (315), Expect = e-177
Identities = 440/481 (91%), Gaps = 3/481 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 87 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 146
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 147 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 206
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 207 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 266
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 267 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 326
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 327 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 386
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| ||||||||||||||||||||| |||||||||| | |||||||||||||
Sbjct: 387 gcgacgggcatgacgagatcgacatggagttcctgggcaacgccacggggcagccggtgg 446
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 447 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 506
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 528
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ggttcgacccggccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 566
Query: 529 t 529
|
Sbjct: 567 t 567
>gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_F09_A002 5', mRNA sequence
Length = 810
Score = 624 bits (315), Expect = e-177
Identities = 440/481 (91%), Gaps = 3/481 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 72 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 131
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 132 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 191
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 192 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 251
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
|||||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 252 ccggcgccggcttcgactccaaggagcagtacctctacggccagttcagcgtccagatga 311
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 312 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 371
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 372 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggtgg 431
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 432 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 491
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 528
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ggttcgacccggccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 551
Query: 529 t 529
|
Sbjct: 552 t 552
>gb|CX610800.1|CX610800 ANR1_20_H05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_20_H05_A002 5', mRNA sequence
Length = 676
Score = 617 bits (311), Expect = e-175
Identities = 439/481 (91%), Gaps = 3/481 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 76 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 135
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 136 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 195
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 196 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 255
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 256 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 315
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| | || |||||||
Sbjct: 316 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttgttctggcgacg 375
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | ||||| |||||||
Sbjct: 376 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcaaccggtgg 435
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 436 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 495
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 528
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggttcgacccggccgccgactaccacacctacaccatcatctggaacccgaccaacatcc 555
Query: 529 t 529
|
Sbjct: 556 t 556
>gb|BE359862.1|BE359862 DG1_58_G02.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 560
Score = 599 bits (302), Expect = e-169
Identities = 433/476 (90%), Gaps = 3/476 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 85 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 144
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| | |||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 145 tggcggacgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 204
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | | ||||||||||||| ||| ||||||||||
Sbjct: 205 tccgcaccaactacgacgagtccggcgcgcatgtggcgatgctcaacctcgaccgcagct 264
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 265 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 324
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 325 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 384
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 385 gcgacgggcatgacgagatcgacatggagctcatgggcaacgccacggggcagccggtgg 444
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 445 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 504
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaac 524
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggttcgacccggccgccgactaccacacctacaccatcatctggaacccgaccaac 560
>gb|CN151800.1|CN151800 WOUND1_77_E10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_77_E10_A002 5', mRNA sequence
Length = 650
Score = 579 bits (292), Expect = e-163
Identities = 423/466 (90%), Gaps = 3/466 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 185 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 244
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 245 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 304
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| | | || | ||||||||||||||| ||| ||||||||||
Sbjct: 305 tccgcaccaactacgacgagcccggcgcgcaggtggcgatgctcaacctcgaccgcagct 364
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||| | |||||||||| |||||| ||||||||||||||||||
Sbjct: 365 ccggcgccggcttcaactccagggagcagtacctctacggccagttcagcgtccagatga 424
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 425 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 484
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||| ||
Sbjct: 485 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggagg 544
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 545 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 604
Query: 469 ggttcgacccctccgccgactaccacacctacaccatcatctggaa 514
|||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 605 ggttcgacccggccgccgactaccacacctacaccatcatctggaa 650
>gb|BM317539.1|BM317539 LG1_332_H05.b9_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 533 bits (269), Expect = e-150
Identities = 385/423 (91%), Gaps = 3/423 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 91 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 150
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 151 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 210
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 211 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 270
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 271 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 330
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 331 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 390
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 391 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggtgg 450
Query: 409 tgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctct 468
|||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 451 tgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgt 510
Query: 469 ggt 471
|||
Sbjct: 511 ggt 513
>gb|BE354980.1|BE354980 DG1_10_F11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 482
Score = 472 bits (238), Expect = e-131
Identities = 348/384 (90%), Gaps = 3/384 (0%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 95 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 154
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 155 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 214
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 215 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 274
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 275 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 334
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacg 348
|||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 335 agctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgacg 394
Query: 349 gcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtgg 408
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 395 gcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggtgg 454
Query: 409 tgctgaacacgaacgtgtgggcca 432
|||| ||||| |||||||||||||
Sbjct: 455 tgctcaacacaaacgtgtgggcca 478
>gb|CF428925.1|CF428925 PH1_18_D09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_18_D09_A002 5', mRNA sequence
Length = 751
Score = 422 bits (213), Expect = e-116
Identities = 307/335 (91%), Gaps = 5/335 (1%)
Strand = Plus / Plus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 219 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 277
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 278 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 337
Query: 315 accgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatg 374
|||||||| ||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 338 accgtctcatgcttctacctttcttccggcgacggcgacgggcacgacgagatcgacatg 397
Query: 375 gagttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagc 434
||||||||||||||||| | ||| |||||||||||||| ||||| ||||||||||||| |
Sbjct: 398 gagttcatgggcaacgccaccggtcagccggtggtgctcaacaccaacgtgtgggccaac 457
Query: 435 ggcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccac 494
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 458 ggcgacggcaagaaggagcaccagttcgacctgtggttcgacccggccgccgactaccac 517
Query: 495 acctacaccatcatctggaacccgaccaacatcct 529
||||||||||||||||||||||| || ||||||||
Sbjct: 518 acctacaccatcatctggaaccctacgaacatcct 552
>gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_28_C04_A002 5', mRNA sequence
Length = 725
Score = 422 bits (213), Expect = e-116
Identities = 307/335 (91%), Gaps = 5/335 (1%)
Strand = Plus / Plus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 195 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 253
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 254 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 313
Query: 315 accgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatg 374
|||||||| ||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 314 accgtctcatgcttctacctttcttccggcgacggcgacgggcacgacgagatcgacatg 373
Query: 375 gagttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagc 434
||||||||||||||||| | ||| |||||||||||||| ||||| ||||||||||||| |
Sbjct: 374 gagttcatgggcaacgccaccggtcagccggtggtgctcaacaccaacgtgtgggccaac 433
Query: 435 ggcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccac 494
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 434 ggcgacggcaagaaggagcaccagttcgacctgtggttcgacccggccgccgactaccac 493
Query: 495 acctacaccatcatctggaacccgaccaacatcct 529
||||||||||||||||||||||| || ||||||||
Sbjct: 494 acctacaccatcatctggaaccctacgaacatcct 528
>gb|AW922606.1|AW922606 DG1_46_D12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 418 bits (211), Expect = e-115
Identities = 305/333 (91%), Gaps = 5/333 (1%)
Strand = Plus / Plus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 190 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 248
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 249 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 308
Query: 315 accgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatg 374
|||||||| ||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 309 accgtctcatgcttctacctttcttccggcgacggcgacgggcacgacgagatcgacatg 368
Query: 375 gagttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagc 434
||||||||||||||||| | ||| |||||||||||||| ||||| ||||||||||||| |
Sbjct: 369 gagttcatgggcaacgccaccggtcagccggtggtgctcaacaccaacgtgtgggccaac 428
Query: 435 ggcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccac 494
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 429 ggcgacggcaagaaggagcaccagttcgacctgtggttcgacccggccgccgactaccac 488
Query: 495 acctacaccatcatctggaacccgaccaacatc 527
||||||||||||||||||||||| || ||||||
Sbjct: 489 acctacaccatcatctggaaccctacgaacatc 521
>gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_E06_A002 5', mRNA sequence
Length = 800
Score = 414 bits (209), Expect = e-114
Identities = 306/335 (91%), Gaps = 5/335 (1%)
Strand = Plus / Plus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 195 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 253
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 254 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 313
Query: 315 accgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatg 374
|||||||| ||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 314 accgtctcatgcttctacctttcttccggcgacggcgacgggcacgacgagatcgacatg 373
Query: 375 gagttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagc 434
||||||||||||||||| | ||| |||||||||||||| ||||| ||||||||||||| |
Sbjct: 374 gagttcatgggcaacgccaccggtcagccggtggtgctcaacaccaacgtgtgggccaac 433
Query: 435 ggcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccac 494
|||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 434 ggcgacagcaagaaggagcaccagttcgacctgtggttcgacccggccgccgactaccac 493
Query: 495 acctacaccatcatctggaacccgaccaacatcct 529
||||||||||||||||||||||| || ||||||||
Sbjct: 494 acctacaccatcatctggaaccctacgaacatcct 528
>gb|CW166039.1|CW166039 104_574_11152832_116_36481_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152832, DNA
sequence
Length = 616
Score = 345 bits (174), Expect = 3e-093
Identities = 257/284 (90%), Gaps = 3/284 (1%)
Strand = Plus / Minus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 441 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 382
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 381 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 322
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 321 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 262
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 261 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 202
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctac 332
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agctcatccccggcaactccgccggcaccgtctcctgcttctac 158
>gb|CW201321.1|CW201321 104_627_11184511_116_37109_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184511, DNA
sequence
Length = 681
Score = 345 bits (174), Expect = 3e-093
Identities = 257/284 (90%), Gaps = 3/284 (1%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 377 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 436
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 437 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 496
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 497 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 556
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 557 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 616
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctac 332
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 617 agctcatccccggcaactccgccggcaccgtctcctgcttctac 660
>gb|CW201322.1|CW201322 104_627_11184511_148_37110_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184511, DNA
sequence
Length = 705
Score = 345 bits (174), Expect = 3e-093
Identities = 257/284 (90%), Gaps = 3/284 (1%)
Strand = Plus / Minus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 393 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 334
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 333 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 274
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 273 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 214
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 213 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 154
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctac 332
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 153 agctcatccccggcaactccgccggcaccgtctcctgcttctac 110
>gb|CW289114.1|CW289114 104_767_11412305_116_35541_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412305, DNA
sequence
Length = 663
Score = 345 bits (174), Expect = 3e-093
Identities = 257/284 (90%), Gaps = 3/284 (1%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 220 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 279
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 280 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 339
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 340 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 399
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 400 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 459
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctac 332
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 460 agctcatccccggcaactccgccggcaccgtctcctgcttctac 503
>gb|CW325952.1|CW325952 104_821_11477963_116_36062_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477963, DNA
sequence
Length = 633
Score = 345 bits (174), Expect = 3e-093
Identities = 257/284 (90%), Gaps = 3/284 (1%)
Strand = Plus / Minus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 437 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 378
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 377 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 318
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 317 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 258
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 257 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 198
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctac 332
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 197 agctcatccccggcaactccgccggcaccgtctcctgcttctac 154
>gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 546
Score = 339 bits (171), Expect = 2e-091
Identities = 237/259 (91%)
Strand = Plus / Plus
Query: 257 gtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcac 316
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 16 gtacctctacggcgagttcagcatccagatgaagctcatccccggcaactccgccggcac 75
Query: 317 cgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatgga 376
|||| | | |||||||||| | || |||||||||||||||||||||||||||||||||||
Sbjct: 76 cgtcacctccttctacctcacctccggcgacggcgacgggcacgacgagatcgacatgga 135
Query: 377 gttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagcgg 436
||||||||||||| | ||||| | || || ||||| ||||| ||||||||||||| |||
Sbjct: 136 gttcatgggcaactccagcggcgaccccgtcgtgctcaacaccaacgtgtgggccaacgg 195
Query: 437 cgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccacac 496
||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 196 cgacggcaagaaggagcaccagttctacctctggttcgacccggccgccgacttccacac 255
Query: 497 ctacaccatcatctggaac 515
|||||||||||||||||||
Sbjct: 256 ctacaccatcatctggaac 274
>gb|BE361634.1|BE361634 DG1_81_C01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 577
Score = 339 bits (171), Expect = 2e-091
Identities = 237/259 (91%)
Strand = Plus / Plus
Query: 257 gtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcac 316
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtacctctacggcgagttcagcatccagatgaagctcatccccggcaactccgccggcac 370
Query: 317 cgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatgga 376
|||| | | |||||||||| | || |||||||||||||||||||||||||||||||||||
Sbjct: 371 cgtcacctccttctacctcacctccggcgacggcgacgggcacgacgagatcgacatgga 430
Query: 377 gttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagcgg 436
||||||||||||| | ||||| | || || ||||| ||||| ||||||||||||| |||
Sbjct: 431 gttcatgggcaactccagcggcgaccccgtcgtgctcaacaccaacgtgtgggccaacgg 490
Query: 437 cgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccacac 496
||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 491 cgacggcaagaaggagcaccagttctacctctggttcgacccggccgccgacttccacac 550
Query: 497 ctacaccatcatctggaac 515
|||||||||||||||||||
Sbjct: 551 ctacaccatcatctggaac 569
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 123 tcggcggactcgtggctctacgacaaggtcaacacggacggca 165
||||||||||||||||| ||||| ||| ||| ||||||||||
Sbjct: 177 tcggcggactcgtggctgtacgagaagttcacgacggacggca 219
>gb|BG357198.1|BG357198 OV2_11_A05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 525
Score = 339 bits (171), Expect = 2e-091
Identities = 237/259 (91%)
Strand = Plus / Plus
Query: 257 gtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcac 316
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 219 gtacctctacggcgagttcagcatccagatgaagctcatccccggcaactccgccggcac 278
Query: 317 cgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatgga 376
|||| | | |||||||||| | || |||||||||||||||||||||||||||||||||||
Sbjct: 279 cgtcacctccttctacctcacctccggcgacggcgacgggcacgacgagatcgacatgga 338
Query: 377 gttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagcgg 436
||||||||||||| | ||||| | || || ||||| ||||| ||||||||||||| |||
Sbjct: 339 gttcatgggcaactccagcggcgaccccgtcgtgctcaacaccaacgtgtgggccaacgg 398
Query: 437 cgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccacac 496
||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 399 cgacggcaagaaggagcaccagttctacctctggttcgacccggccgccgacttccacac 458
Query: 497 ctacaccatcatctggaac 515
|||||||||||||||||||
Sbjct: 459 ctacaccatcatctggaac 477
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 123 tcggcggactcgtggctctacgacaaggtcaacacggacggca 165
||||||||||||||||| ||||| ||| ||| ||||||||||
Sbjct: 85 tcggcggactcgtggctgtacgagaagttcacgacggacggca 127
>gb|BG557476.1|BG557476 EM1_44_F08.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 473
Score = 339 bits (171), Expect = 2e-091
Identities = 253/277 (91%), Gaps = 5/277 (1%)
Strand = Plus / Plus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 198 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 256
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 257 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 316
Query: 315 accgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatg 374
|||||||| ||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 317 accgtctcatgcttctacctttcttccggcgacggcgacgggcacgacgagatcgacatg 376
Query: 375 gagttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagc 434
||||||||||||||||| | ||| |||||||||||||| ||||| ||||||||||||| |
Sbjct: 377 gagttcatgggcaacgccaccggtcagccggtggtgctcaacaccaacgtgtgggccaac 436
Query: 435 ggcgacggcaagaaggagcaccagttcgacctctggt 471
|||||||||||||||||||||||||||||||| ||||
Sbjct: 437 ggcgacggcaagaaggagcaccagttcgacctgtggt 473
>gb|BG102815.1|BG102815 RHIZ2_33_G06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 463
Score = 327 bits (165), Expect = 6e-088
Identities = 216/233 (92%)
Strand = Plus / Plus
Query: 233 cgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatgaagct 292
||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||
Sbjct: 231 cgccggcttcaactccaaggagcagtacctctacggcgagttcagcatcgagatgaagct 290
Query: 293 catccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacggcga 352
||||| || |||||||||||||||||||| ||||||||||| || || |||||||||||
Sbjct: 291 catccgggggaactccgccggcaccgtctcatgcttctacctttcatctggcgacggcga 350
Query: 353 cgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtggtgct 412
||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||
Sbjct: 351 cgggcacgacgagatcgacatggagttcatgggcaacgccaccggtcagccggtggtgct 410
Query: 413 gaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacc 465
||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 411 caacaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacc 463
>gb|CW325953.1|CW325953 104_821_11477963_148_36063_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477963, DNA
sequence
Length = 714
Score = 321 bits (162), Expect = 4e-086
Identities = 254/284 (89%), Gaps = 3/284 (1%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 417 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 476
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 477 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 536
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 537 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 596
Query: 229 ccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatga 288
||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 597 ccggcgccggcttcaactccaaggagcagtacctctacggccagttcagcgtccagatga 656
Query: 289 agctcatccccggcaactccgccggcaccgtctcgtgcttctac 332
|||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 657 agctcatccccggcaaactcgccggcaccgtctcctgcttctac 700
>gb|CF429532.1|CF429532 PH1_22_C12.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_22_C12_A002 5', mRNA sequence
Length = 393
Score = 321 bits (162), Expect = 4e-086
Identities = 268/300 (89%), Gaps = 5/300 (1%)
Strand = Plus / Plus
Query: 52 acaccatggcgcggcggtccctggccctgctgctcgcgtcgtcgctcgccct---gatgg 108
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 95 acaccatggcgcggcggtctctggcccttctgctcgcgtcgtcgctggccctcgtgatga 154
Query: 109 cggccgccgtcgcatcggcggactcgtggctctacgacaaggtcaacacggacggcaccg 168
||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 155 tggcggccgtcgcgtcggcggactcgtggctctacgagaagttcagcacggacggcaccg 214
Query: 169 tccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggaccgcagct 228
|||||||| | ||||||| ||| || | ||||||||||||||| ||| ||||||||||
Sbjct: 215 tccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgaccgcagct 274
Query: 229 ccggcgccggcttcaa-ctccaagaagcagtacctgtacggcgagttcagcgtccagatg 287
|||||||||||||||| ||||| || ||||||||| |||||| |||||||||||||||||
Sbjct: 275 ccggcgccggcttcaaactccagga-gcagtacctctacggccagttcagcgtccagatg 333
Query: 288 aagctcatccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgac 347
||||||||||||||||||||||||||||||||||| ||||||||||| || || ||||||
Sbjct: 334 aagctcatccccggcaactccgccggcaccgtctcctgcttctacctttcttctggcgac 393
>gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462920, DNA
sequence
Length = 655
Score = 293 bits (148), Expect = 8e-078
Identities = 178/188 (94%)
Strand = Plus / Plus
Query: 342 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcag 401
||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||
Sbjct: 209 ggcgacggcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcag 268
Query: 402 ccggtggtgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttc 461
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 269 ccggtggtgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttc 328
Query: 462 gacctctggttcgacccctccgccgactaccacacctacaccatcatctggaacccgacc 521
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gacctgtggttcgacccggccgccgactaccacacctacaccatcatctggaacccgacc 388
Query: 522 aacatcct 529
||||||||
Sbjct: 389 aacatcct 396
Score = 65.9 bits (33), Expect = 3e-009
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 296 ccccggcaactccgccggcaccgtctcgtgcttctac 332
||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ccccggcaactccgccggcaccgtctcctgcttctac 37
>gb|CF427844.1|CF427844 PH1_11_F08.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_11_F08_A002 3', mRNA sequence
Length = 634
Score = 293 bits (148), Expect = 8e-078
Identities = 178/188 (94%)
Strand = Plus / Minus
Query: 342 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcag 401
||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||
Sbjct: 268 ggcgacggcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcag 209
Query: 402 ccggtggtgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttc 461
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 208 ccggtggtgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttc 149
Query: 462 gacctctggttcgacccctccgccgactaccacacctacaccatcatctggaacccgacc 521
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gacctgtggttcgacccggccgccgactaccacacctacaccatcatctggaacccgacc 89
Query: 522 aacatcct 529
||||||||
Sbjct: 88 aacatcct 81
>gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii34e07, DNA sequence
Length = 670
Score = 285 bits (144), Expect = 2e-075
Identities = 177/188 (94%)
Strand = Plus / Plus
Query: 342 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcag 401
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 32 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgccaccggtcag 91
Query: 402 ccggtggtgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttc 461
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 92 ccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttc 151
Query: 462 gacctctggttcgacccctccgccgactaccacacctacaccatcatctggaacccgacc 521
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 152 gacctgtggttcgacccggccgccgactaccacacctacaccatcatctggaaccctacg 211
Query: 522 aacatcct 529
||||||||
Sbjct: 212 aacatcct 219
>gb|CW130174.1|CW130174 104_512_11114967_116_34770_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114967, DNA
sequence
Length = 581
Score = 285 bits (144), Expect = 2e-075
Identities = 177/188 (94%)
Strand = Plus / Minus
Query: 342 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcag 401
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 239 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgccaccggtcag 180
Query: 402 ccggtggtgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttc 461
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 179 ccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttc 120
Query: 462 gacctctggttcgacccctccgccgactaccacacctacaccatcatctggaacccgacc 521
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 119 gacctgtggttcgacccggccgccgactaccacacctacaccatcatctggaaccctacg 60
Query: 522 aacatcct 529
||||||||
Sbjct: 59 aacatcct 52
Score = 143 bits (72), Expect = 2e-032
Identities = 124/138 (89%), Gaps = 5/138 (3%)
Strand = Plus / Minus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 498 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 440
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 439 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 380
Query: 315 accgtctcgtgcttctac 332
|||||||| |||||||||
Sbjct: 379 accgtctcatgcttctac 362
>gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11467109, DNA
sequence
Length = 702
Score = 285 bits (144), Expect = 2e-075
Identities = 177/188 (94%)
Strand = Plus / Plus
Query: 342 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcag 401
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 312 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgccaccggtcag 371
Query: 402 ccggtggtgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttc 461
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 372 ccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttc 431
Query: 462 gacctctggttcgacccctccgccgactaccacacctacaccatcatctggaacccgacc 521
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 432 gacctgtggttcgacccggccgccgactaccacacctacaccatcatctggaaccctacg 491
Query: 522 aacatcct 529
||||||||
Sbjct: 492 aacatcct 499
Score = 143 bits (72), Expect = 2e-032
Identities = 124/138 (89%), Gaps = 5/138 (3%)
Strand = Plus / Plus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 53 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 111
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 112 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 171
Query: 315 accgtctcgtgcttctac 332
|||||||| |||||||||
Sbjct: 172 accgtctcatgcttctac 189
>gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191g19, DNA
sequence
Length = 624
Score = 285 bits (144), Expect = 2e-075
Identities = 177/188 (94%)
Strand = Plus / Plus
Query: 342 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcag 401
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 10 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgccaccggtcag 69
Query: 402 ccggtggtgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttc 461
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 70 ccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttc 129
Query: 462 gacctctggttcgacccctccgccgactaccacacctacaccatcatctggaacccgacc 521
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 130 gacctgtggttcgacccggccgccgactaccacacctacaccatcatctggaaccctacg 189
Query: 522 aacatcct 529
||||||||
Sbjct: 190 aacatcct 197
>gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462920, DNA
sequence
Length = 623
Score = 281 bits (142), Expect = 3e-074
Identities = 172/182 (94%)
Strand = Plus / Minus
Query: 348 ggcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtg 407
||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 623 ggcgacgggcatgacgagatcgacatggagttcatgggcaacgccacggggcagccggtg 564
Query: 408 gtgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctc 467
||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 563 gtgctcaacacaaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctg 504
Query: 468 tggttcgacccctccgccgactaccacacctacaccatcatctggaacccgaccaacatc 527
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tggttcgacccggccgccgactaccacacctacaccatcatctggaacccgaccaacatc 444
Query: 528 ct 529
||
Sbjct: 443 ct 442
>gb|AW283870.1|AW283870 LG1_260_H01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 281 bits (142), Expect = 3e-074
Identities = 199/218 (91%)
Strand = Plus / Minus
Query: 257 gtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcac 316
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 218 gtacctctacggcgagttcagcatccagatgaagctcatccccggcaactccgccggcac 159
Query: 317 cgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatgga 376
|||| | | |||||||||| | || |||||||||||||||||||||||||||||||||||
Sbjct: 158 cgtcacctccttctacctcacctccggcgacggcgacgggcacgacgagatcgacatgga 99
Query: 377 gttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagcgg 436
||||||||||||| | ||||| | || || ||||| ||||| ||||||||||||| |||
Sbjct: 98 gttcatgggcaactccagcggcgaccccgtcgtgctcaacaccaacgtgtgggccaacgg 39
Query: 437 cgacggcaagaaggagcaccagttcgacctctggttcg 474
||||||||||||||||||||||||| ||||||||||||
Sbjct: 38 cgacggcaagaaggagcaccagttctacctctggttcg 1
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 123 tcggcggactcgtggctctacgacaaggtcaacacggacggca 165
||||||||||||||||| ||||| ||| ||| ||||||||||
Sbjct: 352 tcggcggactcgtggctgtacgagaagttcacgacggacggca 310
>gb|BG560670.1|BG560670 RHIZ2_58_C08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 452
Score = 280 bits (141), Expect = 1e-073
Identities = 195/213 (91%)
Strand = Plus / Plus
Query: 233 cgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatgaagct 292
||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||
Sbjct: 240 cgccggcttcaactccaaggagcagtacctctacggcgagttcagcatcgagatgaagct 299
Query: 293 catccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacggcga 352
||||| || |||||||||||||||||||| ||||||||||| || || |||||||||||
Sbjct: 300 catccgggggaactccgccggcaccgtctcatgcttctacctttcatctggcgacggcga 359
Query: 353 cgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtggtgct 412
||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||
Sbjct: 360 cgggcacgacgagatcgacatggagttcatgggcaacgccaccggtcagccggtggtgct 419
Query: 413 gaacacgaacgtgtgggccagcggcgacggcaa 445
||||| ||| ||||||||| ||||||||||||
Sbjct: 420 caacaccaacatgtgggccaacggcgacggcaa 452
>gb|BF422262.1|BF422262 FM1_13_B11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 592
Score = 262 bits (132), Expect = 3e-068
Identities = 213/240 (88%)
Strand = Plus / Plus
Query: 256 agtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggca 315
||||||| | |||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 242 agtacctcttcggcgagttcagcgtcgagatgaagctcgtcgccggcaactccgccggca 301
Query: 316 ccgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatgg 375
| ||| | | ||||||||| |||| ||||| ||||||| ||||||||||||||||||||
Sbjct: 302 ctgtcacctccttctacctgacgtccggcgagggcgacgagcacgacgagatcgacatgg 361
Query: 376 agttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagcg 435
|||||||||||||| | |||||| |||| |||||| ||||| ||||||||||||||||
Sbjct: 362 agttcatgggcaactccagcgggtcgccgacggtgctcaacaccaacgtgtgggccagcg 421
Query: 436 gcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccaca 495
|||||||||||||||||||||||||| |||| ||||||||||| ||||||||| |||||
Sbjct: 422 gcgacggcaagaaggagcaccagttctacctgtggttcgacccggccgccgacttccaca 481
>gb|CD226724.1|CD226724 CCC1_47_H10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_H10_A007 5', mRNA sequence
Length = 621
Score = 262 bits (132), Expect = 3e-068
Identities = 213/240 (88%)
Strand = Plus / Plus
Query: 256 agtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggca 315
||||||| | |||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 280 agtacctcttcggcgagttcagcgtcgagatgaagctcgtcgccggcaactccgccggca 339
Query: 316 ccgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatgg 375
| ||| | | ||||||||| |||| ||||| ||||||| ||||||||||||||||||||
Sbjct: 340 ctgtcacctccttctacctgacgtccggcgagggcgacgagcacgacgagatcgacatgg 399
Query: 376 agttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagcg 435
|||||||||||||| | |||||| |||| |||||| ||||| ||||||||||||||||
Sbjct: 400 agttcatgggcaactccagcgggtcgccgacggtgctcaacaccaacgtgtgggccagcg 459
Query: 436 gcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccaca 495
|||||||||||||||||||||||||| |||| ||||||||||| ||||||||| |||||
Sbjct: 460 gcgacggcaagaaggagcaccagttctacctgtggttcgacccggccgccgacttccaca 519
>gb|BE125256.1|BE125256 DG1_18_D01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 424
Score = 260 bits (131), Expect = 1e-067
Identities = 210/233 (90%), Gaps = 5/233 (2%)
Strand = Plus / Plus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 190 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 248
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 249 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 308
Query: 315 accgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatg 374
|||| ||| ||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 309 accggctcatgcttctacctttcttccggcgacggcgacgggcacgacgagatcgacatg 368
Query: 375 gagttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtg 427
||||||||||||||||| | ||| |||||||||||||| ||||| ||||||||
Sbjct: 369 gagttcatgggcaacgccaccggtcagccggtggtgctcaacaccaacgtgtg 421
>gb|CD428137.1|CD428137 ETH1_32_H05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_H05_A002 5', mRNA sequence
Length = 772
Score = 250 bits (126), Expect = 1e-064
Identities = 160/170 (94%), Gaps = 1/170 (0%)
Strand = Plus / Plus
Query: 360 gacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtggtgctgaacacg 419
|||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||
Sbjct: 543 gacgagatcgacatggagttcatgggcaacgccacggggcagccggtggtgctcaacaca 602
Query: 420 aacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctctggttcgacccc 479
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 603 aacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctgtggttcgacccg 662
Query: 480 tccgccgactaccacacctacaccatcatctggaacccgaccaacatcct 529
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 663 gccgccgactaccacacctacaccatcatctggaacccga-caacatcct 711
Score = 220 bits (111), Expect = 1e-055
Identities = 156/171 (91%)
Strand = Plus / Plus
Query: 162 ggcaccgtccgcacccagtacgacgcgtcggggcaggaggtggcgatgctcagcctggac 221
||||||||||||||| | ||||||| ||| || | ||||||||||||||| ||| |||
Sbjct: 98 ggcaccgtccgcaccaactacgacgagtccggcgcgcaggtggcgatgctcaacctcgac 157
Query: 222 cgcagctccggcgccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtc 281
|||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||
Sbjct: 158 cgcagctccggcgctggcttcaactccaaggagcagtacctctacggccagttcagcgtc 217
Query: 282 cagatgaagctcatccccggcaactccgccggcaccgtctcgtgcttctac 332
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 218 cagatgaagctcatccccggcaactccgccggcaccgtctcctgcttctac 268
Score = 105 bits (53), Expect = 4e-021
Identities = 88/99 (88%), Gaps = 3/99 (3%)
Strand = Plus / Plus
Query: 81 ctgctcgcgtcgtcgctcgccct---gatggcggccgccgtcgcatcggcggactcgtgg 137
||||||||||||||||| ||||| |||| ||| |||||||| |||||||||||||||
Sbjct: 438 ctgctcgcgtcgtcgctggccctcgtgatgatggcggccgtcgcgtcggcggactcgtgg 497
Query: 138 ctctacgacaaggtcaacacggacggcaccgtccgcacc 176
|||||||| ||| ||| ||||||||||||||||||||||
Sbjct: 498 ctctacgagaagttcagcacggacggcaccgtccgcacc 536
>gb|CW219580.1|CW219580 104_653_11196859_116_37141_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196859, DNA
sequence
Length = 525
Score = 246 bits (124), Expect = 2e-063
Identities = 160/172 (93%)
Strand = Plus / Minus
Query: 342 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcag 401
|||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||
Sbjct: 172 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaccgccaccggtcac 113
Query: 402 ccggtggtgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttc 461
||||||||||| ||| | ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 112 ccggtggtgctcaactccaacgtgtgggccaacggcgacggcaagaaggagcaccagttc 53
Query: 462 gacctctggttcgacccctccgccgactaccacacctacaccatcatctgga 513
||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 52 gacctgtggttcgacccggccgccgactaccacacctacaccatcatctgga 1
Score = 105 bits (53), Expect = 4e-021
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 234 gccggcttcaactccaagaagcagtacctgtacggcgagttcagcgtccagatgaagctc 293
|||||||||||||||||| |||||||||| || |||||||||||| | |||||||||||
Sbjct: 393 gccggcttcaactccaaggagcagtacctctaaggcgagttcagcattgagatgaagctc 334
Query: 294 atccccggcaactccgccggcaccgtctcgtgcttct 330
|| | ||| |||||||||||||| ||||| |||||||
Sbjct: 333 atgcgcgggaactccgccggcacagtctcatgcttct 297
>gb|CF431052.1|CF431052 NIT1_4_H09.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_4_H09_A002 5', mRNA sequence
Length = 363
Score = 236 bits (119), Expect = 2e-060
Identities = 180/197 (91%), Gaps = 5/197 (2%)
Strand = Plus / Plus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 163 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 221
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 222 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 281
Query: 315 accgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatg 374
|||||||| ||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 282 accgtctcatgcttctacctttcttccggcgacggcgacgggcacgacgagatcgacatg 341
Query: 375 gagttcatgggcaacgc 391
|||||||||||||||||
Sbjct: 342 gagttcatgggcaacgc 358
>gb|BG560219.1|BG560219 RHIZ2_71_E10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 501
Score = 218 bits (110), Expect = 4e-055
Identities = 164/182 (90%)
Strand = Plus / Plus
Query: 257 gtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcac 316
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtacctctacggcgagttcagcatccagatgaagctcatccccggcaactccgccggcac 379
Query: 317 cgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatgga 376
|||| | | |||||||||| | || |||||||||||||||||||||||||||||||||||
Sbjct: 380 cgtcacctccttctacctcacctccggcgacggcgacgggcacgacgagatcgacatgga 439
Query: 377 gttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagcgg 436
||||||||||||| | ||||| | || || ||||| ||||| ||||||||||||| |||
Sbjct: 440 gttcatgggcaactccagcggcgaccccgtcgtgctcaacaccaacgtgtgggccaacgg 499
Query: 437 cg 438
||
Sbjct: 500 cg 501
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 123 tcggcggactcgtggctctacgacaaggtcaacacggacggca 165
||||||||||||||||| ||||| ||| ||| ||||||||||
Sbjct: 186 tcggcggactcgtggctgtacgagaagttcacgacggacggca 228
>gb|CW415288.1|CW415288 fsbb001f115f07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f115f07, DNA
sequence
Length = 325
Score = 216 bits (109), Expect = 2e-054
Identities = 142/153 (92%)
Strand = Plus / Plus
Query: 377 gttcatgggcaacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagcgg 436
||||||||||||||| | ||| |||||||||||||| ||||| ||||||||||||| |||
Sbjct: 1 gttcatgggcaacgccaccggtcagccggtggtgctcaacaccaacgtgtgggccaacgg 60
Query: 437 cgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccacac 496
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 61 cgacggcaagaaggagcaccagttcgacctgtggttcgacccggccgccgactaccacac 120
Query: 497 ctacaccatcatctggaacccgaccaacatcct 529
||||||||||||||||||||| || ||||||||
Sbjct: 121 ctacaccatcatctggaaccctacgaacatcct 153
>gb|CW457603.1|CW457603 fsbb001f203h22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f203h22, DNA
sequence
Length = 431
Score = 216 bits (109), Expect = 2e-054
Identities = 130/137 (94%)
Strand = Plus / Plus
Query: 342 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcag 401
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 294 ggcgacggcgacgggcacgacgagatcgacatggagttcatgggcaacgccaccggtcag 353
Query: 402 ccggtggtgctgaacacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttc 461
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 354 ccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttc 413
Query: 462 gacctctggttcgaccc 478
||||| |||||||||||
Sbjct: 414 gacctgtggttcgaccc 430
Score = 143 bits (72), Expect = 2e-032
Identities = 124/138 (89%), Gaps = 5/138 (3%)
Strand = Plus / Plus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 35 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 93
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 94 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 153
Query: 315 accgtctcgtgcttctac 332
|||||||| |||||||||
Sbjct: 154 accgtctcatgcttctac 171
>gb|CN143916.1|CN143916 WOUND1_19_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_D07_A002 3', mRNA sequence
Length = 682
Score = 167 bits (84), Expect = 1e-039
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 434 cggcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactacca 493
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 5 cggcgacggcaagaaggagcaccagttcgacctgtggttcgacccggccgccgactacca 64
Query: 494 cacctacaccatcatctggaacccgaccaacatcct 529
||||||||||||||||||||||||||||||||||||
Sbjct: 65 cacctacaccatcatctggaacccgaccaacatcct 100
>gb|CL148238.1|CL148238 104_328_10592951_116_31783_075 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592951, DNA
sequence
Length = 325
Score = 153 bits (77), Expect = 2e-035
Identities = 95/101 (94%)
Strand = Plus / Plus
Query: 415 acacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctctggttcg 474
|||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 acaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttctacctctggttcg 60
Query: 475 acccctccgccgactaccacacctacaccatcatctggaac 515
|||| ||||||||| |||||||||||||||||||||||||
Sbjct: 61 acccggccgccgacttccacacctacaccatcatctggaac 101
>gb|CW063399.1|CW063399 104_309_10521981_115_30140 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10521981, DNA
sequence
Length = 604
Score = 143 bits (72), Expect = 2e-032
Identities = 124/138 (89%), Gaps = 5/138 (3%)
Strand = Plus / Plus
Query: 199 aggtggcgatgctcagcctggacc-gcagctccgg---cgccggcttcaactccaagaag 254
|||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||| ||
Sbjct: 351 aggtggtgatgctcagcctcgaccagca-ctccggcgccgccggcttcaactccaaggag 409
Query: 255 cagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccggc 314
|||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||
Sbjct: 410 cagtacctctacggcgagttcagcatcgagatgaagctcatccgcgggaactccgccggc 469
Query: 315 accgtctcgtgcttctac 332
|||||||| |||||||||
Sbjct: 470 accgtctcatgcttctac 487
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 214,882
Number of Sequences: 832831
Number of extensions: 214882
Number of successful extensions: 63657
Number of sequences better than 0.5: 210
Number of HSP's better than 0.5 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63143
Number of HSP's gapped (non-prelim): 451
length of query: 529
length of database: 491,359,669
effective HSP length: 19
effective length of query: 510
effective length of database: 475,535,880
effective search space: 242523298800
effective search space used: 242523298800
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)