BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829479.2.1
(1245 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sor... 630 e-179
gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Mer... 628 e-178
gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sor... 615 e-174
gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Mer... 613 e-173
gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sor... 609 e-172
gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sor... 581 e-164
gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorg... 557 e-157
gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sor... 492 e-137
gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sor... 486 e-135
gb|BF656758.1|BF656758 OV2_21_E10.g1_A002 Ovary 2 (OV2) Sor... 430 e-118
gb|BE918669.1|BE918669 FM1_1_A12.g1_A003 Floral-Induced Mer... 371 e-100
gb|BG411712.1|BG411712 OV2_37_A12.g1_A002 Ovary 2 (OV2) Sor... 363 3e-098
gb|BE918673.1|BE918673 FM1_1_B06.g1_A003 Floral-Induced Mer... 357 2e-096
gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (L... 333 2e-089
gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sor... 333 2e-089
gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sor... 333 2e-089
gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2... 333 2e-089
gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorgh... 327 1e-087
gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorgh... 327 1e-087
gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorgh... 327 1e-087
gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation... 327 1e-087
gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation... 327 1e-087
gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorgh... 272 7e-071
gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sor... 254 2e-065
gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorg... 232 6e-059
gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorg... 228 1e-057
gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorgh... 222 6e-056
gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum m... 222 6e-056
gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorgh... 222 6e-056
gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorgh... 222 6e-056
gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorgh... 222 6e-056
gb|BF656852.1|BF656852 OV2_23_G05.g1_A002 Ovary 2 (OV2) Sor... 214 1e-053
gb|BG054119.1|BG054119 OV2_3_G02.g1_A002 Ovary 2 (OV2) Sorg... 214 1e-053
gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sor... 178 8e-043
gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation... 176 3e-042
gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sor... 176 3e-042
gb|BF657334.1|BF657334 OV2_20_F03.g1_A002 Ovary 2 (OV2) Sor... 174 1e-041
gb|AY827471.1| Sorghum bicolor MADS box transcription facto... 172 5e-041
gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum m... 168 8e-040
gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum m... 168 8e-040
gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation... 168 8e-040
gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorg... 168 8e-040
gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorg... 168 8e-040
gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sor... 168 8e-040
gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorgh... 165 1e-038
gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorgh... 165 1e-038
gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation... 165 1e-038
gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infecte... 165 1e-038
gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated ... 165 1e-038
gb|BF657618.1|BF657618 OV2_17_D12.g1_A002 Ovary 2 (OV2) Sor... 163 5e-038
gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorg... 161 2e-037
gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sor... 161 2e-037
gb|CW407708.1|CW407708 fsbb001f101e21k0 Sorghum methylation... 159 8e-037
gb|CW077644.1|CW077644 104_383_10893411_116_31773_243 Sorgh... 153 5e-035
gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorgh... 153 5e-035
gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorgh... 153 5e-035
gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorgh... 153 5e-035
gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle ... 153 5e-035
gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle... 153 5e-035
gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription... 153 5e-035
gb|CL181374.1|CL181374 104_392_10896713_116_31926_089 Sorgh... 151 2e-034
gb|CL181375.1|CL181375 104_392_10896713_148_31925_089 Sorgh... 151 2e-034
gb|CW023615.1|CW023615 104_163_10432547_1_30001 Sorghum met... 151 2e-034
gb|CW032483.1|CW032483 104_261_10501401_115_30364 Sorghum m... 151 2e-034
gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorgh... 151 2e-034
gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorgh... 151 2e-034
gb|CD463019.1|CD463019 ETH1_41_H12.g1_A002 Ethylene-treated... 151 2e-034
gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-lik... 151 2e-034
gb|CW028447.1|CW028447 104_255_10499098_116_30393 Sorghum m... 143 4e-032
gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) ... 143 4e-032
gb|CW214921.1|CW214921 104_647_11194268_116_37464_080 Sorgh... 141 2e-031
gb|BF705575.1|BF705575 RHIZ2_4_H03.b1_A003 Rhizome2 (RHIZ2)... 137 3e-030
gb|CW293479.1|CW293479 104_774_11414678_148_35603_063 Sorgh... 133 4e-029
gb|BF317798.1|BF317798 OV1_9_F09.g1_A002 Ovary 1 (OV1) Sorg... 133 4e-029
gb|CW359630.1|CW359630 fsbb001f027f15k0 Sorghum methylation... 129 7e-028
gb|BG240086.1|BG240086 OV1_17_G05.b1_A002 Ovary 1 (OV1) Sor... 129 7e-028
gb|BG241308.1|BG241308 OV1_40_G05.b1_A002 Ovary 1 (OV1) Sor... 129 7e-028
gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box prot... 129 7e-028
gb|CW322676.1|CW322676 104_816_11476224_116_35954_088 Sorgh... 127 3e-027
gb|CW417861.1|CW417861 fsbb001f121b03f0 Sorghum methylation... 121 2e-025
gb|CW452258.1|CW452258 fsbb001f192l07k0 Sorghum methylation... 121 2e-025
gb|CW293027.1|CW293027 104_773_11414425_148_35591_009 Sorgh... 119 6e-025
gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation... 117 3e-024
gb|CW329596.1|CW329596 104_826_11479928_116_35994_028 Sorgh... 115 1e-023
gb|CW329597.1|CW329597 104_826_11479928_148_35993_028 Sorgh... 115 1e-023
gb|CW393458.1|CW393458 fsbb001f080i11k0 Sorghum methylation... 115 1e-023
gb|CW032589.1|CW032589 104_261_10501470_114_30363 Sorghum m... 113 4e-023
gb|CW296923.1|CW296923 104_778_11461772_116_35631_066 Sorgh... 109 6e-022
gb|CW296924.1|CW296924 104_778_11461772_148_35635_066 Sorgh... 109 6e-022
gb|BF704612.1|BF704612 FM1_49_C04.b1_A003 Floral-Induced Me... 109 6e-022
gb|CW209670.1|CW209670 104_639_11189376_116_36992_084 Sorgh... 107 2e-021
gb|CW209671.1|CW209671 104_639_11189376_148_36991_084 Sorgh... 107 2e-021
gb|CW210331.1|CW210331 104_640_11189738_116_37000_003 Sorgh... 105 1e-020
gb|CW275678.1|CW275678 104_749_11405089_148_35390_013 Sorgh... 105 1e-020
gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation... 103 4e-020
gb|BF657151.1|BF657151 OV2_21_D05.b1_A002 Ovary 2 (OV2) Sor... 101 2e-019
gb|CW230669.1|CW230669 104_679_11210696_116_37485_022 Sorgh... 100 6e-019
gb|CW409217.1|CW409217 fsbb001f103g24f0 Sorghum methylation... 100 6e-019
gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seed... 100 6e-019
gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated... 100 6e-019
gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum b... 100 6e-019
gb|BF586649.1|BF586649 FM1_29_H03.b1_A003 Floral-Induced Me... 98 2e-018
gb|CF431741.1|CF431741 NIT1_10_D03.g1_A002 Nitrogen-deficie... 98 2e-018
gb|CW061066.1|CW061066 104_304_10520200_114_30143 Sorghum m... 96 9e-018
gb|CW462985.1|CW462985 fsbb001f211f24f0 Sorghum methylation... 96 9e-018
gb|BZ694660.1|BZ694660 SP__Ba0050A11.f SP__Ba Sorghum propi... 94 4e-017
gb|CW372294.1|CW372294 fsbb001f048c08f0 Sorghum methylation... 94 4e-017
gb|CW489948.1|CW489948 fsbb001f275c14k0 Sorghum methylation... 94 4e-017
gb|CW788871.1|CW788871 SP__Ba0050A11.f SP__Ba Sorghum propi... 94 4e-017
gb|CW072287.1|CW072287 104_325_10592182_114_30538 Sorghum m... 92 1e-016
gb|CW214896.1|CW214896 104_647_11194255_148_37166_032 Sorgh... 92 1e-016
gb|CW386489.1|CW386489 fsbb001f070g18k0 Sorghum methylation... 92 1e-016
gb|CW411862.1|CW411862 fsbb001f107d12k0 Sorghum methylation... 92 1e-016
gb|CW498786.1|CW498786 fsbb001f293d08f0 Sorghum methylation... 92 1e-016
gb|CW502569.1|CW502569 fsbb001f298p16f0 Sorghum methylation... 86 9e-015
gb|CW273794.1|CW273794 104_746_11404091_116_35362_040 Sorgh... 84 4e-014
gb|BG411936.1|BG411936 OV2_40_A01.g1_A002 Ovary 2 (OV2) Sor... 84 4e-014
gb|CL171822.1|CL171822 104_373_10889698_148_31776_370 Sorgh... 82 1e-013
gb|CW195540.1|CW195540 104_619_11180693_116_36805_027 Sorgh... 82 1e-013
gb|CW199961.1|CW199961 104_625_11183794_116_36864_043 Sorgh... 82 1e-013
gb|CW249676.1|CW249676 104_711_11222976_116_35044_088 Sorgh... 82 1e-013
gb|CW249677.1|CW249677 104_711_11222976_148_35048_088 Sorgh... 82 1e-013
gb|CW480188.1|CW480188 fsbb001f239c02f0 Sorghum methylation... 82 1e-013
gb|CW480189.1|CW480189 fsbb001f239c02k0 Sorghum methylation... 82 1e-013
gb|CD432822.1|CD432822 ETH1_33_F08.g1_A002 Ethylene-treated... 82 1e-013
gb|CW195541.1|CW195541 104_619_11180693_148_36801_027 Sorgh... 80 6e-013
gb|CW393457.1|CW393457 fsbb001f080i11f0 Sorghum methylation... 80 6e-013
gb|CW040533.1|CW040533 104_274_10506199_116_30433 Sorghum m... 78 2e-012
gb|CW040534.1|CW040534 104_274_10506199_116_30479 Sorghum m... 78 2e-012
gb|CW040535.1|CW040535 104_274_10506199_116_30481 Sorghum m... 78 2e-012
gb|CW142324.1|CW142324 104_533_11136795_116_34938_006 Sorgh... 78 2e-012
gb|CW142325.1|CW142325 104_533_11136795_148_34942_006 Sorgh... 78 2e-012
gb|CW296060.1|CW296060 104_777_11461289_148_35626_069 Sorgh... 78 2e-012
gb|CW448512.1|CW448512 fsbb001f182c17f0 Sorghum methylation... 78 2e-012
gb|CW448513.1|CW448513 fsbb001f182c17k0 Sorghum methylation... 78 2e-012
gb|CW502333.1|CW502333 fsbb001f298j20f0 Sorghum methylation... 78 2e-012
gb|CW502334.1|CW502334 fsbb001f298j20k0 Sorghum methylation... 78 2e-012
gb|AW681038.1|AW681038 WS1_8_D09.b1_A002 Water-stressed 1 (... 78 2e-012
gb|BG739474.1|BG739474 EM1_81_D03.b1_A002 Embryo 1 (EM1) So... 78 2e-012
gb|BM324114.1|BM324114 PIC1_24_D02.b1_A002 Pathogen-infecte... 78 2e-012
gb|BM325449.1|BM325449 PIC1_44_F08.b1_A002 Pathogen-infecte... 78 2e-012
gb|CB927715.1|CB927715 ABA1_27_E04.g1_A012 Abscisic acid-tr... 78 2e-012
gb|CD431870.1|CD431870 ETH1_11_B03.g1_A002 Ethylene-treated... 78 2e-012
gb|CF486426.1|CF486426 POL1_37_D04.g1_A002 Pollen Sorghum b... 78 2e-012
gb|CN135385.1|CN135385 OX1_32_B05.g1_A002 Oxidatively-stres... 78 2e-012
gb|CL150340.1|CL150340 104_332_10778461_116_31358_013 Sorgh... 74 3e-011
gb|CL170087.1|CL170087 104_370_10813531_116_31789_235 Sorgh... 74 3e-011
gb|CL171821.1|CL171821 104_373_10889698_116_31777_370 Sorgh... 74 3e-011
gb|CW088554.1|CW088554 104_433_10948220_114_32568_072 Sorgh... 74 3e-011
gb|CW088555.1|CW088555 104_433_10948220_116_32578_072 Sorgh... 74 3e-011
gb|CW422054.1|CW422054 fsbb001f131c13f0 Sorghum methylation... 74 3e-011
gb|CF430206.1|CF430206 PH1_26_B03.g1_A002 Phosphorous-defic... 74 3e-011
gb|CF432922.1|CF432922 NIT1_19_H01.g1_A002 Nitrogen-deficie... 74 3e-011
gb|CW293478.1|CW293478 104_774_11414678_116_35599_063 Sorgh... 72 1e-010
gb|CW378066.1|CW378066 fsbb001f056k18f0 Sorghum methylation... 70 5e-010
gb|BG412273.1|BG412273 OV2_40_A01.b1_A002 Ovary 2 (OV2) Sor... 70 5e-010
gb|CF487280.1|CF487280 POL1_42_G07.g1_A002 Pollen Sorghum b... 70 5e-010
gb|CW152181.1|CW152181 104_553_11144352_116_36325_092 Sorgh... 68 2e-009
gb|CW472381.1|CW472381 fsbb001f227e20f0 Sorghum methylation... 68 2e-009
gb|BF421169.1|BF421169 FM1_6_C07.b1_A003 Floral-Induced Mer... 68 2e-009
gb|CW034880.1|CW034880 104_265_10502824_115_30379 Sorghum m... 66 8e-009
gb|CW093595.1|CW093595 104_456_10999867_148_37470_068 Sorgh... 66 8e-009
gb|CW457553.1|CW457553 fsbb001f203g17k0 Sorghum methylation... 66 8e-009
gb|CW472382.1|CW472382 fsbb001f227e20k0 Sorghum methylation... 66 8e-009
gb|CD432530.1|CD432530 ETH1_30_C08.g1_A002 Ethylene-treated... 66 8e-009
gb|CW161335.1|CW161335 104_568_11150361_148_36430_043 Sorgh... 64 3e-008
gb|CL176346.1|CL176346 104_382_10893067_116_31763_283 Sorgh... 60 5e-007
gb|CW297229.1|CW297229 104_779_11461931_116_35636_042 Sorgh... 60 5e-007
gb|AW678464.1|AW678464 WS1_16_D12.b1_A002 Water-stressed 1 ... 60 5e-007
gb|AW678480.1|AW678480 WS1_16_D03.b1_A002 Water-stressed 1 ... 60 5e-007
gb|AW746875.1|AW746875 WS1_56_C05.b1_A002 Water-stressed 1 ... 60 5e-007
gb|AW924005.1|AW924005 WS1_32_E02.b1_A002 Water-stressed 1 ... 60 5e-007
gb|AW924046.1|AW924046 WS1_49_D06.b1_A002 Water-stressed 1 ... 60 5e-007
gb|BE365263.1|BE365263 PI1_26_D10.b1_A002 Pathogen induced ... 60 5e-007
gb|BE600878.1|BE600878 PI1_92_D01.b1_A002 Pathogen induced ... 60 5e-007
gb|BE601014.1|BE601014 PI1_95_H02.b1_A002 Pathogen induced ... 60 5e-007
gb|BG355470.1|BG355470 EM1_16_H03.b1_A002 Embryo 1 (EM1) So... 60 5e-007
gb|BG933507.1|BG933507 WS1_4_C03.b1_A002 Water-stressed 1 (... 60 5e-007
gb|BM323902.1|BM323902 PIC1_29_A07.b1_A002 Pathogen-infecte... 60 5e-007
gb|BM324399.1|BM324399 PIC1_27_G12.b1_A002 Pathogen-infecte... 60 5e-007
gb|CF484314.1|CF484314 POL1_4_B10.g1_A002 Pollen Sorghum bi... 60 5e-007
gb|CN129656.1|CN129656 RHOH1_36_D08.g1_A002 Acid- and alkal... 60 5e-007
gb|CN132011.1|CN132011 OX1_3_C05.g1_A002 Oxidatively-stress... 60 5e-007
gb|CN132026.1|CN132026 OX1_3_D10.g1_A002 Oxidatively-stress... 60 5e-007
gb|CN134777.1|CN134777 OX1_28_A03.g1_A002 Oxidatively-stres... 60 5e-007
gb|CN135407.1|CN135407 OX1_32_D03.g1_A002 Oxidatively-stres... 60 5e-007
gb|CW025535.1|CW025535 104_227_10488251_116_30505 Sorghum m... 56 8e-006
gb|CW063376.1|CW063376 104_309_10521968_114_30136 Sorghum m... 56 8e-006
gb|CW068300.1|CW068300 104_317_10525048_1_30096 Sorghum met... 56 8e-006
gb|CW092369.1|CW092369 104_454_10999117_116_33040_049 Sorgh... 56 8e-006
gb|CW206089.1|CW206089 104_634_11187411_148_36952_004 Sorgh... 56 8e-006
gb|CW253750.1|CW253750 104_717_11225270_116_35113_055 Sorgh... 56 8e-006
gb|CW299620.1|CW299620 104_782_11463215_116_35689_086 Sorgh... 56 8e-006
gb|CW327344.1|CW327344 104_823_11478696_116_35978_096 Sorgh... 56 8e-006
gb|BE596704.1|BE596704 PI1_58_F04.b1_A002 Pathogen induced ... 56 8e-006
gb|BM323459.1|BM323459 PIC1_19_E07.b1_A002 Pathogen-infecte... 56 8e-006
gb|CW117952.1|CW117952 104_494_11107937_148_34681_075 Sorgh... 52 1e-004
gb|CW165612.1|CW165612 104_574_11152600_116_36481_064 Sorgh... 52 1e-004
gb|CD430222.1|CD430222 ETH1_17_G03.g1_A002 Ethylene-treated... 52 1e-004
gb|CW028446.1|CW028446 104_255_10499098_114_30394 Sorghum m... 50 5e-004
gb|CW264897.1|CW264897 104_733_11231564_116_35256_066 Sorgh... 50 5e-004
gb|CW302656.1|CW302656 104_786_11464832_148_35669_018 Sorgh... 48 0.002
gb|CW087311.1|CW087311 104_431_10947544_116_33023_052 Sorgh... 46 0.008
gb|CW147167.1|CW147167 104_540_11139371_116_34996_042 Sorgh... 46 0.008
gb|CW147168.1|CW147168 104_540_11139371_148_34992_042 Sorgh... 46 0.008
gb|BZ345206.1|BZ345206 hr47c01.b1 WGS-SbicolorF (JM107 adap... 42 0.12
gb|CL149416.1|CL149416 104_330_10777812_116_31354_132 Sorgh... 42 0.12
gb|CL150400.1|CL150400 104_332_10778502_116_31358_054 Sorgh... 42 0.12
gb|CL152627.1|CL152627 104_336_10780104_114_31365_120 Sorgh... 42 0.12
gb|AW677705.1|AW677705 WS1_10_H04.g1_A002 Water-stressed 1 ... 42 0.12
gb|AW680791.1|AW680791 WS1_7_E02.b1_A002 Water-stressed 1 (... 42 0.12
gb|AW747184.1|AW747184 WS1_66_D05.b1_A002 Water-stressed 1 ... 42 0.12
gb|AW924682.1|AW924682 WS1_71_C02.b1_A002 Water-stressed 1 ... 42 0.12
gb|AW924776.1|AW924776 WS1_72_C01.b1_A002 Water-stressed 1 ... 42 0.12
gb|BE917818.1|BE917818 OV1_7_E04.g1_A002 Ovary 1 (OV1) Sorg... 42 0.12
gb|BE917899.1|BE917899 OV1_7_E04.b1_A002 Ovary 1 (OV1) Sorg... 42 0.12
gb|BG054138.1|BG054138 OV2_1_F11.b1_A002 Ovary 2 (OV2) Sorg... 42 0.12
gb|BG240522.1|BG240522 OV1_31_A06.b1_A002 Ovary 1 (OV1) Sor... 42 0.12
gb|BG357697.1|BG357697 OV2_29_B12.b1_A002 Ovary 2 (OV2) Sor... 42 0.12
gb|CD423163.1|CD423163 SA1_27_H03.g1_A002 Salicylic acid-tr... 42 0.12
gb|CD431735.1|CD431735 ETH1_10_A12.g1_A002 Ethylene-treated... 42 0.12
gb|CD463540.1|CD463540 ETH1_45_G11.b1_A002 Ethylene-treated... 42 0.12
gb|CD463649.1|CD463649 ETH1_45_B01.g1_A002 Ethylene-treated... 42 0.12
gb|CD463663.1|CD463663 ETH1_45_G11.g1_A002 Ethylene-treated... 42 0.12
gb|CF433231.1|CF433231 NIT1_25_F10.g1_A002 Nitrogen-deficie... 42 0.12
gb|CF480762.1|CF480762 POL1_67_E12.g1_A002 Pollen Sorghum b... 42 0.12
gb|CF484172.1|CF484172 POL1_3_D02.g1_A002 Pollen Sorghum bi... 42 0.12
gb|CN144380.1|CN144380 WOUND1_21_G06.g1_A002 Wounded leaves... 42 0.12
gb|CN148492.1|CN148492 WOUND1_57_A06.b1_A002 Wounded leaves... 42 0.12
gb|CN148572.1|CN148572 WOUND1_57_A06.g1_A002 Wounded leaves... 42 0.12
gb|CN151763.1|CN151763 WOUND1_77_A12.g1_A002 Wounded leaves... 42 0.12
gb|CL168526.1|CL168526 104_366_10810894_148_31806_190 Sorgh... 40 0.48
gb|CL173100.1|CL173100 104_376_10890649_116_31795_169 Sorgh... 40 0.48
gb|CL173101.1|CL173101 104_376_10890649_148_31794_169 Sorgh... 40 0.48
gb|CW033470.1|CW033470 104_263_10501978_115_30360 Sorghum m... 40 0.48
gb|CW057575.1|CW057575 104_299_10518295_115_30171 Sorghum m... 40 0.48
gb|CW097364.1|CW097364 104_463_11002415_116_34346_090 Sorgh... 40 0.48
gb|CW413762.1|CW413762 fsbb001f113b07k0 Sorghum methylation... 40 0.48
gb|BF587016.1|BF587016 FM1_32_C03.g1_A003 Floral-Induced Me... 40 0.48
gb|BF657703.1|BF657703 OV2_20_G02.b1_A002 Ovary 2 (OV2) Sor... 40 0.48
>gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 572
Score = 630 bits (318), Expect = e-179
Identities = 454/498 (91%), Gaps = 15/498 (3%)
Strand = Plus / Minus
Query: 599 ctttctccagcttgccctccatttgtttaagatccctgaggcccatggtgtggatggaat 658
||||||||||| ||||||||| || |||||||||||||||| |||||||||||| ||||
Sbjct: 570 ctttctccagcntgccctccagctgcttaagatccctgaggctcatggtgtggattgaat 511
Query: 659 ctcccactatgttcctagtgtttgcgttttgcaagctgtggatcatctgtcgcagcttgg 718
||||||||||| |||| |||||||||||||||||| ||| |||| ||||||||||
Sbjct: 510 ctcccactatggtcct---gtttgcgttttgcaagctactgatagtctggcgcagcttgg 454
Query: 719 aggactcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagt 778
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 453 aggactcctgctggtagtgctgggcactgacttctgcaactgtgccagagttggaggtgt 394
Query: 779 cactgttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cactgttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgt 334
Query: 839 agaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgaga 898
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 333 agaggcggccgcggctggagaagacgatgagcgcgacctcggcgtcgcagagcaccgaga 274
Query: 899 gctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcg 958
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||
Sbjct: 273 gctcgtacgccttcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttcg 214
Query: 959 tcgtgttctcgatgcgcttgatctcgatcttgcctctcccctgcccctgcctgtcgccgg 1018
| |||||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct: 213 tggtgttctcgatgcgcttgatctcgatcttgcccct------cccctgcttgtcgccgg 160
Query: 1019 agcccgtcggcgccgccgccacctgctccttgaccttggacgacggcccgcagctcagat 1078
|||||||||| |||||||| |||||| | |||| |||||||| |||||||||||
Sbjct: 159 agcccgtcgg---cgccgccagctgctctgtcacct---ccgacggccggcagctcagat 106
Query: 1079 cagtcatcatgttgagca 1096
||||||||||||||||||
Sbjct: 105 cagtcatcatgttgagca 88
>gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 530
Score = 628 bits (317), Expect = e-178
Identities = 454/498 (91%), Gaps = 15/498 (3%)
Strand = Plus / Minus
Query: 599 ctttctccagcttgccctccatttgtttaagatccctgaggcccatggtgtggatggaat 658
||||||||||| ||||||||| || |||||||||||||||| |||||||||||| ||||
Sbjct: 526 ctttctccagcctgccctccagctgcttaagatccctgaggctcatggtgtggattgaat 467
Query: 659 ctcccactatgttcctagtgtttgcgttttgcaagctgtggatcatctgtcgcagcttgg 718
||||||||||| |||| |||||||||||||||||| ||| |||| ||||||||||
Sbjct: 466 ctcccactatggtcct---gtttgcgttttgcaagctactgatagtctggcgcagcttgg 410
Query: 719 aggactcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagt 778
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 409 aggactcctgctggtagtgctgggcactgacttctgcaactgtgccagagttggaggtgt 350
Query: 779 cactgttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cactgttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgt 290
Query: 839 agaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgaga 898
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 289 agaggcggccgcggctggagaagacgatgagcgcgacctcggcgtcgcagagcaccgaga 230
Query: 899 gctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcg 958
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||
Sbjct: 229 gctcgtacgccttcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttcg 170
Query: 959 tcgtgttctcgatgcgcttgatctcgatcttgcctctcccctgcccctgcctgtcgccgg 1018
| |||||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct: 169 tggtgttctcgatgcgcttgatctcgatcttgcccct------cccctgcttgtcgccgg 116
Query: 1019 agcccgtcggcgccgccgccacctgctccttgaccttggacgacggcccgcagctcagat 1078
|||||||||| |||||||| |||||| | |||| |||||||| |||||||||||
Sbjct: 115 agcccgtcgg---cgccgccagctgctctgtcacct---ccgacggccggcagctcagat 62
Query: 1079 cagtcatcatgttgagca 1096
||||||||||||||||||
Sbjct: 61 cagtcatcatgttgagca 44
>gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 474
Score = 615 bits (310), Expect = e-174
Identities = 410/443 (92%), Gaps = 9/443 (2%)
Strand = Plus / Minus
Query: 593 ttatggctttctccagcttgccctccatttgtttaagatccctgaggcccatggtgtgga 652
||||| ||||||||||| ||||||||| || |||||||||||||||| |||||||||||
Sbjct: 474 ttatgcctttctccagcctgccctccagctgcttaagatccctgaggctcatggtgtgga 415
Query: 653 tggaatctcccactatgttcctagtgtttgcgttttgcaagctgtggatcatctgtcgca 712
| ||||||||||||||| |||| |||||||||||||||||| ||| |||| ||||
Sbjct: 414 ttgaatctcccactatggtcct---gtttgcgttttgcaagctactgatagtctggcgca 358
Query: 713 gcttggaggactcctgctggtagtactgggcattgacttctgcaactgtgccagagttgg 772
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 357 gcttggaggactcctgctggtagtgctgggcactgacttctgcaactgtgccagagttgg 298
Query: 773 aggagtcactgttggccttcttgtacctctcaatggtggacttcacactgttgttggcgt 832
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aggtgtcactgttggccttcttgtacctctcaatggtggacttcacactgttgttggcgt 238
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 237 actcgtagaggcggccgcggctggagaagacgatgagcgcgacctcggcgtcgcagagca 178
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 177 ccgagagctcgtacgccttcttgaggaggccgttgcggcgcttgcagaaggtgacctgcc 118
Query: 953 ggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctcccctgcccctgcctgt 1012
|| |||| |||||||||||||||||||||||||||||||| || ||||||| |||
Sbjct: 117 ggttcgtggtgttctcgatgcgcttgatctcgatcttgcccct------cccctgcttgt 64
Query: 1013 cgccggagcccgtcggcgccgcc 1035
|||||||||||||||||||||||
Sbjct: 63 cgccggagcccgtcggcgccgcc 41
>gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 515
Score = 613 bits (309), Expect = e-173
Identities = 443/486 (91%), Gaps = 15/486 (3%)
Strand = Plus / Minus
Query: 611 tgccctccatttgtttaagatccctgaggcccatggtgtggatggaatctcccactatgt 670
||||||||| || |||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 514 tgccctccagctgcttaagatccctgaggctcatggtgtggattgaatctcccactatgg 455
Query: 671 tcctagtgtttgcgttttgcaagctgtggatcatctgtcgcagcttggaggactcctgct 730
|||| |||||||||||||||||| ||| |||| ||||||||||||||||||||||
Sbjct: 454 tcct---gtttgcgttttgcaagctactgatagtctggcgcagcttggaggactcctgct 398
Query: 731 ggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactgttggcct 790
|||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 397 ggtagtgctgggcactgacttctgcaactgtgccagagttggaggtgtcactgttggcct 338
Query: 791 tcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgc 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgc 278
Query: 851 ggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgcct 910
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ggctggagaagacgatgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgcct 218
Query: 911 tcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcga 970
||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||||||
Sbjct: 217 tcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttcgtggtgttctcga 158
Query: 971 tgcgcttgatctcgatcttgcctctcccctgcccctgcctgtcgccggagcccgtcggcg 1030
|||||||||||||||||||||| || ||||||| |||||||||||||||||||
Sbjct: 157 tgcgcttgatctcgatcttgcccct------cccctgcttgtcgccggagcccgtcgg-- 106
Query: 1031 ccgccgccacctgctccttgaccttggacgacggcccgcagctcagatcagtcatcatgt 1090
|||||||| |||||| | |||| |||||||| |||||||||||||||||||||||
Sbjct: 105 -cgccgccagctgctctgtcacct---ccgacggccggcagctcagatcagtcatcatgt 50
Query: 1091 tgagca 1096
||||||
Sbjct: 49 tgagca 44
>gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 507
Score = 609 bits (307), Expect = e-172
Identities = 432/472 (91%), Gaps = 15/472 (3%)
Strand = Plus / Minus
Query: 625 ttaagatccctgaggcccatggtgtggatggaatctcccactatgttcctagtgtttgcg 684
|||||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||
Sbjct: 502 ttaagatccctgaggctcatggtgtggattgaatctcccactatggtcct---gtttgcg 446
Query: 685 ttttgcaagctgtggatcatctgtcgcagcttggaggactcctgctggtagtactgggca 744
||||||||||| ||| |||| |||||||||||||||||||||||||||| |||||||
Sbjct: 445 ttttgcaagctactgatagtctggcgcagcttggaggactcctgctggtagtgctgggca 386
Query: 745 ttgacttctgcaactgtgccagagttggaggagtcactgttggccttcttgtacctctca 804
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 ctgacttctgcaactgtgccagagttggaggtgtcactgttggccttcttgtacctctca 326
Query: 805 atggtggacttcacactgttgttggcgtactcgtagaggcggccgcggctggagaagacg 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atggtggacttcacactgttgttggcgtactcgtagaggcggccgcggctggagaagacg 266
Query: 865 acgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccg 924
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 atgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttgaggaggccg 206
Query: 925 ttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcg 984
|||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||
Sbjct: 205 ttgcggcgcttgcagaaggtgacctgccggttcgtggtgttctcgatgcgcttgatctcg 146
Query: 985 atcttgcctctcccctgcccctgcctgtcgccggagcccgtcggcgccgccgccacctgc 1044
|||||||| || ||||||| ||||||||||||||||||| |||||||| ||||
Sbjct: 145 atcttgcccct------cccctgcttgtcgccggagcccgtcgg---cgccgccagctgc 95
Query: 1045 tccttgaccttggacgacggcccgcagctcagatcagtcatcatgttgagca 1096
|| | |||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 94 tctgtcacct---ccgacggccggcagctcagatcagtcatcatgttgagca 46
>gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 508
Score = 581 bits (293), Expect = e-164
Identities = 415/454 (91%), Gaps = 15/454 (3%)
Strand = Plus / Minus
Query: 643 atggtgtggatggaatctcccactatgttcctagtgtttgcgttttgcaagctgtggatc 702
||||||||||| ||||||||||||||| |||| |||||||||||||||||| |||
Sbjct: 508 atggtgtggattgaatctcccactatggtcct---gtttgcgttttgcaagctactgata 452
Query: 703 atctgtcgcagcttggaggactcctgctggtagtactgggcattgacttctgcaactgtg 762
|||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 451 gtctggcgcagcttggaggactcctgctggtagtgctgggcactgacttctgcaactgtg 392
Query: 763 ccagagttggaggagtcactgttggccttcttgtacctctcaatggtggacttcacactg 822
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ccagagttggaggtgtcactgttggccttcttgtacctctcaatggtggacttcacactg 332
Query: 823 ttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcg 882
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 331 ttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagcgcgacctcggcg 272
Query: 883 tcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaag 942
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 271 tcgcagagcaccgagagctcgtacgccttcttgaggaggccgttgcggcgcttgcagaag 212
Query: 943 gtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctcccctgc 1002
|| ||||||||| |||| |||||||||||||||||||||||||||||||| || |
Sbjct: 211 gtgacctgccggttcgtggtgttctcgatgcgcttgatctcgatcttgcccct------c 158
Query: 1003 ccctgcctgtcgccggagcccgtcggcgccgccgccacctgctccttgaccttggacgac 1062
|||||| ||||||||||||||||||| |||||||| |||||| | |||| ||||
Sbjct: 157 ccctgcttgtcgccggagcccgtcgg---cgccgccagctgctctgtcacct---ccgac 104
Query: 1063 ggcccgcagctcagatcagtcatcatgttgagca 1096
|||| |||||||||||||||||||||||||||||
Sbjct: 103 ggccggcagctcagatcagtcatcatgttgagca 70
>gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 551
Score = 557 bits (281), Expect = e-157
Identities = 386/420 (91%), Gaps = 12/420 (2%)
Strand = Plus / Minus
Query: 677 tgtttgcgttttgcaagctgtggatcatctgtcgcagcttggaggactcctgctggtagt 736
||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||
Sbjct: 549 tgtttgcgttttgcaagctactgatagtctggcgcagcttggaggactcctgctggtagt 490
Query: 737 actgggcattgacttctgcaactgtgccagagttggaggagtcactgttggccttcttgt 796
||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 489 gctgggcactgacttctgcaactgtgccagagttggaggtgtcactgttggccttcttgt 430
Query: 797 acctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcggctgg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 acctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcggctgg 370
Query: 857 agaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttga 916
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agaagacgatgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttga 310
Query: 917 gcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcgct 976
| |||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||
Sbjct: 309 ggaggccgttgcggcgcttgcagaaggtgacctgccggttcgtggtgttctcgatgcgct 250
Query: 977 tgatctcgatcttgcctctcccctgcccctgcctgtcgccggagcccgtcggcgccgccg 1036
|||||||||||||||| || ||||||| ||||||||||||||||||| |||||
Sbjct: 249 tgatctcgatcttgcccct------cccctgcttgtcgccggagcccgtcgg---cgccg 199
Query: 1037 ccacctgctccttgaccttggacgacggcccgcagctcagatcagtcatcatgttgagca 1096
||| |||||| | |||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 198 ccagctgctctgtcacct---ccgacggccggcagctcagatcagtcatcatgttgagca 142
>gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 436
Score = 492 bits (248), Expect = e-137
Identities = 332/359 (92%), Gaps = 12/359 (3%)
Strand = Plus / Minus
Query: 738 ctgggcattgacttctgcaactgtgccagagttggaggagtcactgttggccttcttgta 797
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 436 ctgggcactgacttctgcaactgtgccagagttggaggtgtcactgttggccttcttgta 377
Query: 798 cctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcggctgga 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcggctgga 317
Query: 858 gaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttgag 917
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gaagacgatgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttgag 257
Query: 918 caggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcgctt 977
|||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||
Sbjct: 256 gaggccgttgcggcgcttgcagaaggtgacctgccggttcgtggtgttctcgatgcgctt 197
Query: 978 gatctcgatcttgcctctcccctgcccctgcctgtcgccggagcccgtcggcgccgccgc 1037
||||||||||||||| || ||||||| ||||||||||||||||||| ||||||
Sbjct: 196 gatctcgatcttgcccct------cccctgcttgtcgccggagcccgtcgg---cgccgc 146
Query: 1038 cacctgctccttgaccttggacgacggcccgcagctcagatcagtcatcatgttgagca 1096
|| |||||| | |||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 145 cagctgctctgtcacct---ccgacggccggcagctcagatcagtcatcatgttgagca 90
>gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 434
Score = 486 bits (245), Expect = e-135
Identities = 339/368 (92%), Gaps = 13/368 (3%)
Strand = Plus / Minus
Query: 729 ctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactgttggc 788
|||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 434 ctggtagtgctgggcactgacttctgcaactgt-ccagagttggaggtgtcactgttggc 376
Query: 789 cttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggcc 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggcc 316
Query: 849 gcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgc 908
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gcggctggagaagacgatgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgc 256
Query: 909 cttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctc 968
||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||||
Sbjct: 255 cttcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttcgtggtgttctc 196
Query: 969 gatgcgcttgatctcgatcttgcctctcccctgcccctgcctgtcgccggagcccgtcgg 1028
|||||||||||||||||||||||| || ||||||| |||||||||||||||||||
Sbjct: 195 gatgcgcttgatctcgatcttgcccct------cccctgcttgtcgccggagcccgtcgg 142
Query: 1029 cgccgccgccacctgctccttgaccttggacgacggcccgcagctcagatcagtcatcat 1088
|||||||| |||||| | |||| |||||||| |||||||||||||||||||||
Sbjct: 141 ---cgccgccagctgctctgtcacct---ccgacggccggcagctcagatcagtcatcat 88
Query: 1089 gttgagca 1096
||||||||
Sbjct: 87 gttgagca 80
>gb|BF656758.1|BF656758 OV2_21_E10.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 637
Score = 430 bits (217), Expect = e-118
Identities = 349/393 (88%), Gaps = 15/393 (3%)
Strand = Plus / Minus
Query: 312 atttcatcatccgagctggagggttgtaggttgcagctgatgggagtagtgctgaggc-- 369
||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 407 atttcgtcatccgagttgcagggttgttggttgcagctgatgggagtagtgctgaggctg 348
Query: 370 -------atgctcacttgcagaaagtttctcgagtcgaaaggggccatgtggtcgtactc 422
||| ||||||| ||||||||||||||||| |||||| ||||||| ||||| ||
Sbjct: 347 ctgcatgatgttcacttgaagaaagtttctcgagtcaaaagggaccatgtgctcgtattc 288
Query: 423 gctcgtcggcggcgctcccatcgtcatgtgcatcgccggctgccccgtttcattactctc 482
||| |||| ||| |||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 287 gcttgtcgatggcactcccatc---atgttcatcgccggctgccccgtttcattattctc 231
Query: 483 agcgatcttgctcctcaggtacatgttgtcagtctgcagatccatctcccttttttgcat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 agcgatcttgctcctcaggtacatgttgtcagtctgcagatccatctcccttttttgcat 171
Query: 543 atagtcaacttcagcgtatagcagctcattctttctagctctaatcttgattatggcttt 602
|||||||||| ||| |||| |||||||||||||||||||||||||||| ||||| ||||
Sbjct: 170 atagtcaactatagcatataacagctcattctttctagctctaatcttgcttatgccttt 111
Query: 603 ctccagcttgccctccatttgtttaagatccctgaggcccatggtgtggatggaatctcc 662
||||||| ||||||||| || |||||||||||||||| |||||||||||| ||||||||
Sbjct: 110 ctccagcctgccctccagctgcttaagatccctgaggctcatggtgtggattgaatctcc 51
Query: 663 cactatgttcctagtgtttgcgttttgcaagct 695
||||||| ||| |||||||||||||||||||
Sbjct: 50 cactatggtcc---tgtttgcgttttgcaagct 21
Score = 50.1 bits (25), Expect = 5e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 233 gatctcgatttggcacatgatataactgcatgc 265
|||||||||| | ||||||||||||||||||||
Sbjct: 485 gatctcgattggacacatgatataactgcatgc 453
Score = 44.1 bits (22), Expect = 0.031
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 176 acagttgcactaatcacaattattaataat 205
||||||| ||||||||| ||||||||||||
Sbjct: 542 acagttgtactaatcacgattattaataat 513
>gb|BE918669.1|BE918669 FM1_1_A12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 684
Score = 371 bits (187), Expect = e-100
Identities = 284/317 (89%), Gaps = 12/317 (3%)
Strand = Plus / Minus
Query: 312 atttcatcatccgagctggagggttgtaggttgcagctgatgggagtagtgctgaggc-- 369
||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 atttcgtcatccgagttgcagggttgttggttgcagctgatgggagtagtgctgaggctg 261
Query: 370 -------atgctcacttgcagaaagtttctcgagtcgaaaggggccatgtggtcgtactc 422
||| ||||||| ||||||||||||||||| |||||| ||||||| ||||| ||
Sbjct: 260 ctgcatgatgttcacttgaagaaagtttctcgagtcaaaagggaccatgtgctcgtattc 201
Query: 423 gctcgtcggcggcgctcccatcgtcatgtgcatcgccggctgccccgtttcattactctc 482
||| |||| ||| |||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 200 gcttgtcgatggcactcccatc---atgttcatcgccggctgccccgtttcattattctc 144
Query: 483 agcgatcttgctcctcaggtacatgttgtcagtctgcagatccatctcccttttttgcat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 agcgatcttgctcctcaggtacatgttgtcagtctgcagatccatctcccttttttgcat 84
Query: 543 atagtcaacttcagcgtatagcagctcattctttctagctctaatcttgattatggcttt 602
||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||
Sbjct: 83 atagtcaacttcagcatataacagctcattctttctagctctaatcttgcttatgccttt 24
Query: 603 ctccagcttgccctcca 619
||||||| |||||||||
Sbjct: 23 ctccagcctgccctcca 7
Score = 50.1 bits (25), Expect = 5e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 233 gatctcgatttggcacatgatataactgcatgc 265
|||||||||| | ||||||||||||||||||||
Sbjct: 398 gatctcgattggacacatgatataactgcatgc 366
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/43 (90%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 112 cagctaaattcacacgtacaaatgcacgcacacagtggtggca 154
||||| |||| ||||||||||||||| |||||||||||||||
Sbjct: 621 cagctgaattaacacgtacaaatgca--cacacagtggtggca 581
Score = 44.1 bits (22), Expect = 0.031
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 176 acagttgcactaatcacaattattaataat 205
||||||| ||||||||| ||||||||||||
Sbjct: 455 acagttgtactaatcacgattattaataat 426
>gb|BG411712.1|BG411712 OV2_37_A12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 699
Score = 363 bits (183), Expect = 3e-098
Identities = 280/313 (89%), Gaps = 12/313 (3%)
Strand = Plus / Minus
Query: 312 atttcatcatccgagctggagggttgtaggttgcagctgatgggagtagtgctgaggc-- 369
||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 310 atttcgtcatccgagttgcagggttgttggttgcagctgatgggagtagtgctgaggctg 251
Query: 370 -------atgctcacttgcagaaagtttctcgagtcgaaaggggccatgtggtcgtactc 422
||| ||||||| ||||||||||||||||| |||||| ||||||| ||||| ||
Sbjct: 250 ctgcatgatgttcacttgaagaaagtttctcgagtcaaaagggaccatgtgctcgtattc 191
Query: 423 gctcgtcggcggcgctcccatcgtcatgtgcatcgccggctgccccgtttcattactctc 482
||| |||| ||| |||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 190 gcttgtcgatggcactcccatc---atgttcatcgccggctgccccgtttcattattctc 134
Query: 483 agcgatcttgctcctcaggtacatgttgtcagtctgcagatccatctcccttttttgcat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agcgatcttgctcctcaggtacatgttgtcagtctgcagatccatctcccttttttgcat 74
Query: 543 atagtcaacttcagcgtatagcagctcattctttctagctctaatcttgattatggcttt 602
||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||
Sbjct: 73 atagtcaacttcagcatataacagctcattctttctagctctaatcttgcttatgccttt 14
Query: 603 ctccagcttgccc 615
||||||| |||||
Sbjct: 13 ctccagcctgccc 1
Score = 50.1 bits (25), Expect = 5e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 233 gatctcgatttggcacatgatataactgcatgc 265
|||||||||| | ||||||||||||||||||||
Sbjct: 388 gatctcgattggacacatgatataactgcatgc 356
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/43 (90%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 112 cagctaaattcacacgtacaaatgcacgcacacagtggtggca 154
||||| |||| ||||||||||||||| |||||||||||||||
Sbjct: 611 cagctgaattaacacgtacaaatgca--cacacagtggtggca 571
Score = 44.1 bits (22), Expect = 0.031
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 176 acagttgcactaatcacaattattaataat 205
||||||| ||||||||| ||||||||||||
Sbjct: 445 acagttgtactaatcacgattattaataat 416
>gb|BE918673.1|BE918673 FM1_1_B06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 668
Score = 357 bits (180), Expect = 2e-096
Identities = 274/306 (89%), Gaps = 12/306 (3%)
Strand = Plus / Minus
Query: 312 atttcatcatccgagctggagggttgtaggttgcagctgatgggagtagtgctgaggc-- 369
||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 303 atttcgtcatccgagttgcagggttgttggttgcagctgatgggagtagtgctgaggctg 244
Query: 370 -------atgctcacttgcagaaagtttctcgagtcgaaaggggccatgtggtcgtactc 422
||| ||||||| ||||||||||||||||| |||||| ||||||| ||||| ||
Sbjct: 243 ctgcatgatgttcacttgaagaaagtttctcgagtcaaaagggaccatgtgctcgtattc 184
Query: 423 gctcgtcggcggcgctcccatcgtcatgtgcatcgccggctgccccgtttcattactctc 482
||| |||| ||| |||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 183 gcttgtcgatggcactcccatc---atgttcatcgccggctgccccgtttcattattctc 127
Query: 483 agcgatcttgctcctcaggtacatgttgtcagtctgcagatccatctcccttttttgcat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 agcgatcttgctcctcaggtacatgttgtcagtctgcagatccatctcccttttttgcat 67
Query: 543 atagtcaacttcagcgtatagcagctcattctttctagctctaatcttgattatggcttt 602
||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||
Sbjct: 66 atagtcaacttcagcatataacagctcattctttctagctctaatcttgcttatgccttt 7
Query: 603 ctccag 608
||||||
Sbjct: 6 ctccag 1
Score = 50.1 bits (25), Expect = 5e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 233 gatctcgatttggcacatgatataactgcatgc 265
|||||||||| | ||||||||||||||||||||
Sbjct: 381 gatctcgattggacacatgatataactgcatgc 349
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/43 (90%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 112 cagctaaattcacacgtacaaatgcacgcacacagtggtggca 154
||||| |||| ||||||||||||||| |||||||||||||||
Sbjct: 604 cagctgaattaacacgtacaaatgca--cacacagtggtggca 564
Score = 44.1 bits (22), Expect = 0.031
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 176 acagttgcactaatcacaattattaataat 205
||||||| ||||||||| ||||||||||||
Sbjct: 438 acagttgtactaatcacgattattaataat 409
>gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 333 bits (168), Expect = 2e-089
Identities = 204/216 (94%)
Strand = Plus / Minus
Query: 777 gtcactgttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactc 836
||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct: 512 gtcactgtttgccttcttgtacctctcaatggtggccttcacgctgttgttggagtactc 453
Query: 837 gtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccga 896
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 452 gtagaggcggccgcggctggagaagacgatgagcgcgacctcggcgtcgcagagcacgga 393
Query: 897 gagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggct 956
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |
Sbjct: 392 gagctcgtacgccttcttgaggaggccgttgcggcgcttgcagaaggtcacctgcctgtt 333
Query: 957 cgtcgtgttctcgatgcgcttgatctcgatcttgcc 992
|||||||||||||||||||||||||| |||||||
Sbjct: 332 ggtcgtgttctcgatgcgcttgatctcagtcttgcc 297
>gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 569
Score = 333 bits (168), Expect = 2e-089
Identities = 204/216 (94%)
Strand = Plus / Minus
Query: 777 gtcactgttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactc 836
||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct: 509 gtcactgtttgccttcttgtacctctcaatggtggccttcacgctgttgttggagtactc 450
Query: 837 gtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccga 896
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 449 gtagaggcggccgcggctggagaagacgatgagcgcgacctcggcgtcgcagagcacgga 390
Query: 897 gagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggct 956
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |
Sbjct: 389 gagctcgtacgccttcttgaggaggccgttgcggcgcttgcagaaggtcacctgcctgtt 330
Query: 957 cgtcgtgttctcgatgcgcttgatctcgatcttgcc 992
|||||||||||||||||||||||||| |||||||
Sbjct: 329 ggtcgtgttctcgatgcgcttgatctcagtcttgcc 294
>gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 333 bits (168), Expect = 2e-089
Identities = 204/216 (94%)
Strand = Plus / Minus
Query: 777 gtcactgttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactc 836
||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct: 509 gtcactgtttgccttcttgtacctctcaatggtggccttcacgctgttgttggagtactc 450
Query: 837 gtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccga 896
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 449 gtagaggcggccgcggctggagaagacgatgagcgcgacctcggcgtcgcagagcacgga 390
Query: 897 gagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggct 956
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |
Sbjct: 389 gagctcgtacgccttcttgaggaggccgttgcggcgcttgcagaaggtcacctgcctgtt 330
Query: 957 cgtcgtgttctcgatgcgcttgatctcgatcttgcc 992
|||||||||||||||||||||||||| |||||||
Sbjct: 329 ggtcgtgttctcgatgcgcttgatctcagtcttgcc 294
>gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 535
Score = 333 bits (168), Expect = 2e-089
Identities = 204/216 (94%)
Strand = Plus / Minus
Query: 777 gtcactgttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactc 836
||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct: 514 gtcactgtttgccttcttgtacctctcaatggtggccttcacgctgttgttggagtactc 455
Query: 837 gtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccga 896
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 454 gtagaggcggccgcggctggagaagacgatgagcgcgacctcggcgtcgcagagcacgga 395
Query: 897 gagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggct 956
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |
Sbjct: 394 gagctcgtacgccttcttgaggaggccgttgcggcgcttgcagaaggtcacctgcctgtt 335
Query: 957 cgtcgtgttctcgatgcgcttgatctcgatcttgcc 992
|||||||||||||||||||||||||| |||||||
Sbjct: 334 ggtcgtgttctcgatgcgcttgatctcagtcttgcc 299
>gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809549, DNA
sequence
Length = 690
Score = 327 bits (165), Expect = 1e-087
Identities = 203/216 (93%), Gaps = 6/216 (2%)
Strand = Plus / Plus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 435 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagcgcgacctcg 494
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 495 gcgtcgcagagcaccgagagctcgtacgccttcttgaggaggccgttgcggcgcttgcag 554
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctcccc 999
||||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||
Sbjct: 555 aaggtgacctgccggttcgtggtgttctcgatgcgcttgatctcgatcttgcccct---- 610
Query: 1000 tgcccctgcctgtcgccggagcccgtcggcgccgcc 1035
||||||| ||||||||||||||||||||||||||
Sbjct: 611 --cccctgcttgtcgccggagcccgtcggcgccgcc 644
>gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 605
Score = 327 bits (165), Expect = 1e-087
Identities = 203/216 (93%), Gaps = 6/216 (2%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 529 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagcgcgacctcg 470
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 469 gcgtcgcagagcaccgagagctcgtacgccttcttgaggaggccgttgcggcgcttgcag 410
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctcccc 999
||||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||
Sbjct: 409 aaggtgacctgccggttcgtggtgttctcgatgcgcttgatctcgatcttgcccct---- 354
Query: 1000 tgcccctgcctgtcgccggagcccgtcggcgccgcc 1035
||||||| ||||||||||||||||||||||||||
Sbjct: 353 --cccctgcttgtcgccggagcccgtcggcgccgcc 320
>gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 620
Score = 327 bits (165), Expect = 1e-087
Identities = 203/216 (93%), Gaps = 6/216 (2%)
Strand = Plus / Plus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 145 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagcgcgacctcg 204
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 gcgtcgcagagcaccgagagctcgtacgccttcttgaggaggccgttgcggcgcttgcag 264
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctcccc 999
||||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||
Sbjct: 265 aaggtgacctgccggttcgtggtgttctcgatgcgcttgatctcgatcttgcccct---- 320
Query: 1000 tgcccctgcctgtcgccggagcccgtcggcgccgcc 1035
||||||| ||||||||||||||||||||||||||
Sbjct: 321 --cccctgcttgtcgccggagcccgtcggcgccgcc 354
>gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 611
Score = 327 bits (165), Expect = 1e-087
Identities = 203/216 (93%), Gaps = 6/216 (2%)
Strand = Plus / Plus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 288 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagcgcgacctcg 347
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 348 gcgtcgcagagcaccgagagctcgtacgccttcttgaggaggccgttgcggcgcttgcag 407
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctcccc 999
||||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||
Sbjct: 408 aaggtgacctgccggttcgtggtgttctcgatgcgcttgatctcgatcttgcccct---- 463
Query: 1000 tgcccctgcctgtcgccggagcccgtcggcgccgcc 1035
||||||| ||||||||||||||||||||||||||
Sbjct: 464 --cccctgcttgtcgccggagcccgtcggcgccgcc 497
>gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 654
Score = 327 bits (165), Expect = 1e-087
Identities = 203/216 (93%), Gaps = 6/216 (2%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 513 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagcgcgacctcg 454
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 453 gcgtcgcagagcaccgagagctcgtacgccttcttgaggaggccgttgcggcgcttgcag 394
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctcccc 999
||||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||
Sbjct: 393 aaggtgacctgccggttcgtggtgttctcgatgcgcttgatctcgatcttgcccct---- 338
Query: 1000 tgcccctgcctgtcgccggagcccgtcggcgccgcc 1035
||||||| ||||||||||||||||||||||||||
Sbjct: 337 --cccctgcttgtcgccggagcccgtcggcgccgcc 304
>gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226403, DNA
sequence
Length = 572
Score = 272 bits (137), Expect = 7e-071
Identities = 164/173 (94%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 286 ctgttgttggagtactcgtagaggcggccgcggctggagaagacgatgagcgcgacctcg 227
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 226 gcgtcgcagagcacggagagctcgtacgccttcttgaggaggccgttgcggcgcttgcag 167
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcc 992
||||||||||||| | | |||||||||||||||||||||||||| |||||||
Sbjct: 166 aaggtcacctgcctgttggtcgtgttctcgatgcgcttgatctcagtcttgcc 114
>gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 496
Score = 254 bits (128), Expect = 2e-065
Identities = 179/196 (91%)
Strand = Plus / Minus
Query: 788 ccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggc 847
||||||||||||||||||| || | |||||| ||||||||||||||||||||||||||||
Sbjct: 318 ccttcttgtacctctcaatcgtagccttcacgctgttgttggcgtactcgtagaggcggc 259
Query: 848 cgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacg 907
|||||||||||||||||| ||| || |||||||||||||| || || |||||||||||||
Sbjct: 258 cgcggctggagaagacgatgagggccacctcggcgtcgcacaggacggagagctcgtacg 199
Query: 908 ccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttct 967
|||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 198 ccttcttgaggagcccgttgcggcgcttgcagaaggtgacctgccggctcgtgttgttct 139
Query: 968 cgatgcgcttgatctc 983
|||| | |||||||||
Sbjct: 138 cgatcctcttgatctc 123
>gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 288
Score = 232 bits (117), Expect = 6e-059
Identities = 168/185 (90%)
Strand = Plus / Minus
Query: 799 ctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcggctggag 858
|||||||| || | |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctctcaatcgtagccttcacgctgttgttggcgtactcgtagaggcggccgcggctggag 229
Query: 859 aagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttgagc 918
||||||| ||| || |||||||||||||| || || |||||||||||||||||||||||
Sbjct: 228 aagacgatgagggccacctcggcgtcgcacaggacggagagctcgtacgccttcttgagg 169
Query: 919 aggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcgcttg 978
|| ||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||
Sbjct: 168 agcccgttgcggcgcttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttg 109
Query: 979 atctc 983
|||||
Sbjct: 108 atctc 104
>gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 295
Score = 228 bits (115), Expect = 1e-057
Identities = 157/171 (91%)
Strand = Plus / Minus
Query: 813 cttcacactgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgc 872
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 287 cttcacgctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagggc 228
Query: 873 gacctcggcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcg 932
|||||||||||||| || || ||||||||||||||||||||||| || |||||||||||
Sbjct: 227 cacctcggcgtcgcacaggacggagagctcgtacgccttcttgaggagcccgttgcggcg 168
Query: 933 cttgcagaaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctc 983
|||||||||||| |||||||||||||| |||||||||| | |||||||||
Sbjct: 167 cttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 117
>gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809866, DNA
sequence
Length = 713
Score = 222 bits (112), Expect = 6e-056
Identities = 151/164 (92%)
Strand = Plus / Plus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||
Sbjct: 400 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagggccacctcg 459
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||| || || ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 460 gcgtcgcacaggacggagagctcgtacgccttcttgaggagcccgttgcggcgcttgcag 519
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctc 983
||||| |||||||||||||| |||||||||| | |||||||||
Sbjct: 520 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 563
>gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10524173, DNA
sequence
Length = 470
Score = 222 bits (112), Expect = 6e-056
Identities = 151/164 (92%)
Strand = Plus / Plus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||
Sbjct: 148 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagggccacctcg 207
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||| || || ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 208 gcgtcgcacaggacggagagctcgtacgccttcttgaggagcccgttgcggcgcttgcag 267
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctc 983
||||| |||||||||||||| |||||||||| | |||||||||
Sbjct: 268 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 311
>gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104678, DNA
sequence
Length = 621
Score = 222 bits (112), Expect = 6e-056
Identities = 151/164 (92%)
Strand = Plus / Plus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||
Sbjct: 269 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagggccacctcg 328
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||| || || ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 329 gcgtcgcacaggacggagagctcgtacgccttcttgaggagcccgttgcggcgcttgcag 388
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctc 983
||||| |||||||||||||| |||||||||| | |||||||||
Sbjct: 389 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 432
>gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113875, DNA
sequence
Length = 660
Score = 222 bits (112), Expect = 6e-056
Identities = 151/164 (92%)
Strand = Plus / Plus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||
Sbjct: 425 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagggccacctcg 484
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||| || || ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 485 gcgtcgcacaggacggagagctcgtacgccttcttgaggagcccgttgcggcgcttgcag 544
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctc 983
||||| |||||||||||||| |||||||||| | |||||||||
Sbjct: 545 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 588
>gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404091, DNA
sequence
Length = 618
Score = 222 bits (112), Expect = 6e-056
Identities = 151/164 (92%)
Strand = Plus / Plus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||
Sbjct: 398 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgatgagggccacctcg 457
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
|||||||| || || ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 458 gcgtcgcacaggacggagagctcgtacgccttcttgaggagcccgttgcggcgcttgcag 517
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctc 983
||||| |||||||||||||| |||||||||| | |||||||||
Sbjct: 518 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 561
>gb|BF656852.1|BF656852 OV2_23_G05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 578
Score = 214 bits (108), Expect = 1e-053
Identities = 193/222 (86%), Gaps = 12/222 (5%)
Strand = Plus / Minus
Query: 312 atttcatcatccgagctggagggttgtaggttgcagctgatgggagtagtgctgaggc-- 369
||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 219 atttcgtcatccgagttgcagggttgttggttgcagctgatgggagtagtgctgaggctg 160
Query: 370 -------atgctcacttgcagaaagtttctcgagtcgaaaggggccatgtggtcgtactc 422
||| ||||||| ||||||||||||||||| |||||| ||||||| ||||| ||
Sbjct: 159 ctgcatgatgttcacttgaagaaagtttctcgagtcaaaagggaccatgtgctcgtattc 100
Query: 423 gctcgtcggcggcgctcccatcgtcatgtgcatcgccggctgccccgtttcattactctc 482
||| |||| ||| |||||||| |||| ||||||||| ||||||||||||||| ||||
Sbjct: 99 gcttgtcgatggcactcccatc---atgttcatcgccgggtgccccgtttcattattctc 43
Query: 483 agcgatcttgctcctcaggtacatgttgtcagtctgcagatc 524
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 agcgatcttgctcctcaggtacatgttgtcagtctgcagatc 1
Score = 50.1 bits (25), Expect = 5e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 233 gatctcgatttggcacatgatataactgcatgc 265
|||||||||| | ||||||||||||||||||||
Sbjct: 297 gatctcgattggacacatgatataactgcatgc 265
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/43 (90%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 112 cagctaaattcacacgtacaaatgcacgcacacagtggtggca 154
||||| |||| ||||||||||||||| |||||||||||||||
Sbjct: 520 cagctgaattaacacgtacaaatgca--cacacagtggtggca 480
Score = 44.1 bits (22), Expect = 0.031
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 176 acagttgcactaatcacaattattaataat 205
||||||| ||||||||| ||||||||||||
Sbjct: 354 acagttgtactaatcacgattattaataat 325
>gb|BG054119.1|BG054119 OV2_3_G02.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 525
Score = 214 bits (108), Expect = 1e-053
Identities = 190/218 (87%), Gaps = 12/218 (5%)
Strand = Plus / Minus
Query: 312 atttcatcatccgagctggagggttgtaggttgcagctgatgggagtagtgctgaggc-- 369
||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 215 atttcgtcatccgagttgcagggttgttggttgcagctgatgggagtagtgctgaggctg 156
Query: 370 -------atgctcacttgcagaaagtttctcgagtcgaaaggggccatgtggtcgtactc 422
||| ||||||| ||||||||||||||||| |||||| ||||||| ||||| ||
Sbjct: 155 ctgcatgatgttcacttgaagaaagtttctcgagtcaaaagggaccatgtgctcgtattc 96
Query: 423 gctcgtcggcggcgctcccatcgtcatgtgcatcgccggctgccccgtttcattactctc 482
||| |||| ||| |||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 95 gcttgtcgatggcactcccatc---atgttcatcgccggctgccccgtttcattattctc 39
Query: 483 agcgatcttgctcctcaggtacatgttgtcagtctgca 520
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 agcgatcttgctcctcaggtacatgttgtcagtctgca 1
Score = 50.1 bits (25), Expect = 5e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 233 gatctcgatttggcacatgatataactgcatgc 265
|||||||||| | ||||||||||||||||||||
Sbjct: 293 gatctcgattggacacatgatataactgcatgc 261
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/43 (90%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 112 cagctaaattcacacgtacaaatgcacgcacacagtggtggca 154
||||| |||| ||||||||||||||| |||||||||||||||
Sbjct: 516 cagctgaattaacacgtacaaatgca--cacacagtggtggca 476
Score = 44.1 bits (22), Expect = 0.031
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 176 acagttgcactaatcacaattattaataat 205
||||||| ||||||||| ||||||||||||
Sbjct: 350 acagttgtactaatcacgattattaataat 321
>gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 475
Score = 178 bits (90), Expect = 8e-043
Identities = 120/130 (92%)
Strand = Plus / Minus
Query: 788 ccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggc 847
||||||||||||||||||| || | |||||| ||||||||||||||||||||||||||||
Sbjct: 142 ccttcttgtacctctcaatcgtagccttcacgctgttgttggcgtactcgtagaggcggc 83
Query: 848 cgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacg 907
|||||||||||||||||| ||| || |||||||||||||| || || |||||||||||||
Sbjct: 82 cgcggctggagaagacgatgagggccacctcggcgtcgcacaggacggagagctcgtacg 23
Query: 908 ccttcttgag 917
||||||||||
Sbjct: 22 ccttcttgag 13
>gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f209d06, DNA
sequence
Length = 779
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
||||| |||||||||||||||||||||||| || ||| ||||||||||||||||||||||
Sbjct: 336 actcgaagaggcggccgcggctggagaagatgatgagggcgacctcggcgtcgcagagca 395
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
|||| ||||||||||||||||||||||| ||||| ||||||||| ||| ||||||||||
Sbjct: 396 ccgacagctcgtacgccttcttgagcagcccgttccggcgcttggcgaacgtcacctgcc 455
Query: 953 ggctcgtcgtgttctcgatgcgctt 977
|||| || |||||||||| |||||
Sbjct: 456 ggctgatcttgttctcgatccgctt 480
>gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 407
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 213 actcgtagagcttgccgcggctggagaagatgatgagcgcgacctcggcgtcgcagagca 154
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
Sbjct: 153 cggagagctcgtacgccttcttgagcaggccgttgcggcgcttggagaaggtgacctggc 94
Query: 953 ggctcgtcgtgttctcgatgcgctt 977
|| | || |||||||||| |||||
Sbjct: 93 ggttgatcttgttctcgatccgctt 69
>gb|BF657334.1|BF657334 OV2_20_F03.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 530
Score = 174 bits (88), Expect = 1e-041
Identities = 170/198 (85%), Gaps = 12/198 (6%)
Strand = Plus / Minus
Query: 312 atttcatcatccgagctggagggttgtaggttgcagctgatgggagtagtgctgaggc-- 369
||||| ||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 195 atttcgtcatccgagttgcagggttgttggttgcagctgatgggagtagtgctgaggctg 136
Query: 370 -------atgctcacttgcagaaagtttctcgagtcgaaaggggccatgtggtcgtactc 422
||| ||||||| ||||||||||||||||| |||||| ||||||| ||||| ||
Sbjct: 135 ctgcatgatgttcacttgaagaaagtttctcgagtcaaaagggaccatgtgctcgtattc 76
Query: 423 gctcgtcggcggcgctcccatcgtcatgtgcatcgccggctgccccgtttcattactctc 482
||| |||| ||| |||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 75 gcttgtcgatggcactcccatc---atgttcatcgccggctgccccgtttcattattctc 19
Query: 483 agcgatcttgctcctcag 500
||||||||||||||||||
Sbjct: 18 agcgatcttgctcctcag 1
Score = 50.1 bits (25), Expect = 5e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 233 gatctcgatttggcacatgatataactgcatgc 265
|||||||||| | ||||||||||||||||||||
Sbjct: 273 gatctcgattggacacatgatataactgcatgc 241
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/43 (90%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 112 cagctaaattcacacgtacaaatgcacgcacacagtggtggca 154
||||| |||| ||||||||||||||| |||||||||||||||
Sbjct: 496 cagctgaattaacacgtacaaatgca--cacacagtggtggca 456
Score = 44.1 bits (22), Expect = 0.031
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 176 acagttgcactaatcacaattattaataat 205
||||||| ||||||||| ||||||||||||
Sbjct: 330 acagttgtactaatcacgattattaataat 301
>gb|AY827471.1| Sorghum bicolor MADS box transcription factor mRNA, partial cds
Length = 829
Score = 172 bits (87), Expect = 5e-041
Identities = 126/139 (90%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
||||| |||||||||||||||||||||||| || ||| ||||||||||||||||||||||
Sbjct: 151 actcgaagaggcggccgcggctggagaagatgatgagggcgacctcggcgtcgcagagca 92
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
|||| ||||||||||||||||||||||| ||||| ||||||||| ||| ||||||||||
Sbjct: 91 ccgacagctcgtacgccttcttgagcagcccgttccggcgcttggcgaacgtcacctgcc 32
Query: 953 ggctcgtcgtgttctcgat 971
|||| || ||||||||||
Sbjct: 31 ggctgatcttgttctcgat 13
>gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 697
Score = 168 bits (85), Expect = 8e-040
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 283 actcgtagagcttgccgcggttggagaagatgatgagcgcgacctcggcgtcgcagagca 342
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 343 cggagagctcgtacgccttcttgagcaggccgttgcggcgcttggcgaaggtgacctggc 402
Query: 953 ggctcgtcgtgttctcgatgcgcttgatctcga 985
|| | || |||||||||| ||||||| |||||
Sbjct: 403 ggttgatcttgttctcgatccgcttgagctcga 435
>gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 716
Score = 168 bits (85), Expect = 8e-040
Identities = 136/153 (88%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 634 actcgtagagcttgccgcggttggagaagatgatgagcgcgacctcggcgtcgcagagca 575
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 574 cggagagctcgtacgccttcttgagcaggccgttgcggcgcttggcgaaggtgacctggc 515
Query: 953 ggctcgtcgtgttctcgatgcgcttgatctcga 985
|| | || |||||||||| ||||||| |||||
Sbjct: 514 ggttgatcttgttctcgatccgcttgagctcga 482
>gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i06, DNA
sequence
Length = 725
Score = 168 bits (85), Expect = 8e-040
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 536 actcgtagagcttgccgcggttggagaagatgatgagcgcgacctcggcgtcgcagagca 595
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 596 cggagagctcgtacgccttcttgagcaggccgttgcggcgcttggcgaaggtgacctggc 655
Query: 953 ggctcgtcgtgttctcgatgcgcttgatctcga 985
|| | || |||||||||| ||||||| |||||
Sbjct: 656 ggttgatcttgttctcgatccgcttgagctcga 688
>gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 561
Score = 168 bits (85), Expect = 8e-040
Identities = 136/153 (88%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 211 actcgtagagcttgccgcggttggagaagatgatgagcgcgacctcggcgtcgcagagca 152
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 151 cggagagctcgtacgccttcttgagcaggccgttgcggcgcttggcgaaggtgacctggc 92
Query: 953 ggctcgtcgtgttctcgatgcgcttgatctcga 985
|| | || |||||||||| ||||||| |||||
Sbjct: 91 ggttgatcttgttctcgatccgcttgagctcga 59
>gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 377
Score = 168 bits (85), Expect = 8e-040
Identities = 136/153 (88%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 331 actcgtagagcttgccgcggttggagaagatgatgagcgcgacctcggcgtcgcagagca 272
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 271 cggagagctcgtacgccttcttgagcaggccgttgcggcgcttggcgaaggtgacctggc 212
Query: 953 ggctcgtcgtgttctcgatgcgcttgatctcga 985
|| | || |||||||||| ||||||| |||||
Sbjct: 211 ggttgatcttgttctcgatccgcttgagctcga 179
>gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 168 bits (85), Expect = 8e-040
Identities = 136/153 (88%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 327 actcgtagagcttgccgcggttggagaagatgatgagcgcgacctcggcgtcgcagagca 268
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 267 cggagagctcgtacgccttcttgagcaggccgttgcggcgcttggcgaaggtgacctggc 208
Query: 953 ggctcgtcgtgttctcgatgcgcttgatctcga 985
|| | || |||||||||| ||||||| |||||
Sbjct: 207 ggttgatcttgttctcgatccgcttgagctcga 175
>gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155545, DNA
sequence
Length = 655
Score = 165 bits (83), Expect = 1e-038
Identities = 116/127 (91%)
Strand = Plus / Plus
Query: 856 gagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttg 915
||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 498 gagaagacgacgagcgcgacctcggcgtcgcagaggacggagagctcgaacgccttcttg 557
Query: 916 agcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcgc 975
||||||||||||||||||||| ||||||| ||||| ||||| |||| |||||| || |||
Sbjct: 558 agcaggccgttgcggcgcttggagaaggtgacctggcggctggtcgcgttctctatccgc 617
Query: 976 ttgatct 982
|| ||||
Sbjct: 618 ttcatct 624
>gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481239, DNA
sequence
Length = 584
Score = 165 bits (83), Expect = 1e-038
Identities = 113/123 (91%)
Strand = Plus / Plus
Query: 855 ggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttctt 914
||||||||||| |||| ||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 295 ggagaagacgatgagcccgacctcagcgtcgcagagcacggagagctcgtaggccttctt 354
Query: 915 gagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcg 974
|||||| ||||||||||||||| |||||||||||||||||||||||| |||||| || ||
Sbjct: 355 gagcagcccgttgcggcgcttggagaaggtcacctgccggctcgtcgcgttctctatccg 414
Query: 975 ctt 977
|||
Sbjct: 415 ctt 417
>gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f098e17, DNA
sequence
Length = 631
Score = 165 bits (83), Expect = 1e-038
Identities = 113/123 (91%)
Strand = Plus / Plus
Query: 855 ggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttctt 914
||||||||||| |||| ||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 212 ggagaagacgatgagcccgacctcagcgtcgcagagcacggagagctcgtaggccttctt 271
Query: 915 gagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcg 974
|||||| ||||||||||||||| |||||||||||||||||||||||| |||||| || ||
Sbjct: 272 gagcagcccgttgcggcgcttggagaaggtcacctgccggctcgtcgcgttctctatccg 331
Query: 975 ctt 977
|||
Sbjct: 332 ctt 334
>gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 421
Score = 165 bits (83), Expect = 1e-038
Identities = 113/123 (91%)
Strand = Plus / Minus
Query: 855 ggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttctt 914
||||||||||| |||| ||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 309 ggagaagacgatgagcccgacctcagcgtcgcagagcacggagagctcgtaggccttctt 250
Query: 915 gagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcg 974
|||||| ||||||||||||||| |||||||||||||||||||||||| |||||| || ||
Sbjct: 249 gagcagcccgttgcggcgcttggagaaggtcacctgccggctcgtcgcgttctctatccg 190
Query: 975 ctt 977
|||
Sbjct: 189 ctt 187
>gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_2_E10_A002 5', mRNA sequence
Length = 447
Score = 165 bits (83), Expect = 1e-038
Identities = 113/123 (91%)
Strand = Plus / Minus
Query: 855 ggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttctt 914
||||||||||| |||| ||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 346 ggagaagacgatgagcccgacctcagcgtcgcagagcacggagagctcgtaggccttctt 287
Query: 915 gagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcg 974
|||||| ||||||||||||||| |||||||||||||||||||||||| |||||| || ||
Sbjct: 286 gagcagcccgttgcggcgcttggagaaggtcacctgccggctcgtcgcgttctctatccg 227
Query: 975 ctt 977
|||
Sbjct: 226 ctt 224
>gb|BF657618.1|BF657618 OV2_17_D12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 599
Score = 163 bits (82), Expect = 5e-038
Identities = 167/196 (85%), Gaps = 12/196 (6%)
Strand = Plus / Minus
Query: 312 atttcatcatccgagctggagggttgtaggttgcagctgatgggagtagtgctgaggc-- 369
||||| ||||||||| || | |||||| ||||||||||||||||||||||||||||||
Sbjct: 193 atttcgtcatccgagttgcaaggttgttggttgcagctgatgggagtagtgctgaggctg 134
Query: 370 -------atgctcacttgcagaaagtttctcgagtcgaaaggggccatgtggtcgtactc 422
||| ||||||| ||||||||||||||||| |||||| ||||||| ||||| ||
Sbjct: 133 ctgcatgatgttcacttgaagaaagtttctcgagtcaaaagggaccatgtgctcgtattc 74
Query: 423 gctcgtcggcggcgctcccatcgtcatgtgcatcgccggctgccccgtttcattactctc 482
||| |||| ||| |||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 73 gcttgtcgatggcactcccatc---atgttcatcgccggctgccccgtttcattattctc 17
Query: 483 agcgatcttgctcctc 498
||||||||||||||||
Sbjct: 16 agcgatcttgctcctc 1
Score = 50.1 bits (25), Expect = 5e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 233 gatctcgatttggcacatgatataactgcatgc 265
|||||||||| | ||||||||||||||||||||
Sbjct: 271 gatctcgattggacacatgatataactgcatgc 239
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/43 (90%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 112 cagctaaattcacacgtacaaatgcacgcacacagtggtggca 154
||||| |||| ||||||||||||||| |||||||||||||||
Sbjct: 494 cagctgaattaacacgtacaaatgca--cacacagtggtggca 454
Score = 44.1 bits (22), Expect = 0.031
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 176 acagttgcactaatcacaattattaataat 205
||||||| ||||||||| ||||||||||||
Sbjct: 328 acagttgtactaatcacgattattaataat 299
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 385,733
Number of Sequences: 832831
Number of extensions: 385733
Number of successful extensions: 116506
Number of sequences better than 0.5: 242
Number of HSP's better than 0.5 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115948
Number of HSP's gapped (non-prelim): 502
length of query: 1245
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1225
effective length of database: 474,703,049
effective search space: 581511235025
effective search space used: 581511235025
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)