BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713091.2.1
(1013 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD463838.1|CD463838 ETH1_47_F10.b1_A002 Ethylene-treated... 704 0.0
gb|CD463985.1|CD463985 ETH1_47_F10.g1_A002 Ethylene-treated... 702 0.0
gb|CW168013.1|CW168013 104_577_11153917_148_36492_055 Sorgh... 486 e-135
gb|CW224877.1|CW224877 104_662_11204056_116_37206_060 Sorgh... 486 e-135
gb|CD428784.1|CD428784 ETH1_36_F06.b1_A002 Ethylene-treated... 452 e-125
gb|BM330345.1|BM330345 PIC1_50_G02.g1_A002 Pathogen-infecte... 434 e-120
gb|CF071635.1|CF071635 FE1_17_D03.g1_A002 Iron-deficient se... 434 e-120
gb|CW224878.1|CW224878 104_662_11204056_148_37205_060 Sorgh... 418 e-115
gb|CW290371.1|CW290371 104_769_11412975_116_35553_054 Sorgh... 418 e-115
gb|CW459012.1|CW459012 fsbb001f205i21k0 Sorghum methylation... 418 e-115
gb|BM330354.1|BM330354 PIC1_50_H02.g1_A002 Pathogen-infecte... 414 e-114
gb|CW290372.1|CW290372 104_769_11412975_148_35557_054 Sorgh... 396 e-108
gb|CF072870.1|CF072870 FE1_26_A12.b1_A002 Iron-deficient se... 323 2e-086
gb|CW183587.1|CW183587 104_599_11164694_148_36677_055 Sorgh... 159 6e-037
gb|CB925482.1|CB925482 ABA1_33_G05.g1_A012 Abscisic acid-tr... 159 6e-037
gb|CD432214.1|CD432214 ETH1_26_E09.g1_A002 Ethylene-treated... 159 6e-037
gb|CN129146.1|CN129146 RHOH1_33_F09.g1_A002 Acid- and alkal... 159 6e-037
gb|CX622011.1|CX622011 GABR1_61_B06.g2_A002 GA- or brassino... 159 6e-037
gb|CW226157.1|CW226157 104_664_11204738_148_37217_013 Sorgh... 151 1e-034
gb|CW298152.1|CW298152 104_780_11462428_116_35649_006 Sorgh... 151 1e-034
gb|CN140982.1|CN140982 OX1_48_C12.g1_A002 Oxidatively-stres... 151 1e-034
gb|CN147630.1|CN147630 WOUND1_50_H12.g1_A002 Wounded leaves... 151 1e-034
gb|CW095836.1|CW095836 104_461_11001557_148_34328_027 Sorgh... 143 4e-032
gb|BF421185.1|BF421185 FM1_6_E04.b1_A003 Floral-Induced Mer... 143 4e-032
gb|BF421398.1|BF421398 FM1_8_D04.b1_A003 Floral-Induced Mer... 143 4e-032
gb|CW366630.1|CW366630 fsbb001f039l10k0 Sorghum methylation... 127 2e-027
gb|CW161660.1|CW161660 104_568_11150530_148_36435_037 Sorgh... 123 3e-026
gb|BE355015.1|BE355015 DG1_10_E05.b1_A002 Dark Grown 1 (DG1... 123 3e-026
gb|BE355164.1|BE355164 DG1_10_E05.g1_A002 Dark Grown 1 (DG1... 123 3e-026
gb|CW259602.1|CW259602 104_726_11228516_116_35191_080 Sorgh... 117 2e-024
gb|BE355802.1|BE355802 DG1_11_E04.b1_A002 Dark Grown 1 (DG1... 109 5e-022
gb|CN141311.1|CN141311 OX1_50_E02.g1_A002 Oxidatively-stres... 105 8e-021
gb|CN142345.1|CN142345 WOUND1_9_A01.g1_A002 Wounded leaves ... 105 8e-021
gb|CW137912.1|CW137912 104_525_11119926_116_34877_023 Sorgh... 103 3e-020
gb|CW137913.1|CW137913 104_525_11119926_148_34873_023 Sorgh... 103 3e-020
gb|CW434448.1|CW434448 fsbb001f150c10k0 Sorghum methylation... 103 3e-020
gb|CW434882.1|CW434882 fsbb001f150m16k0 Sorghum methylation... 103 3e-020
gb|CW490180.1|CW490180 fsbb001f275h22f0 Sorghum methylation... 103 3e-020
gb|BM323141.1|BM323141 PIC1_8_B08.b1_A002 Pathogen-infected... 103 3e-020
gb|BM324939.1|BM324939 PIC1_37_G06.b1_A002 Pathogen-infecte... 103 3e-020
gb|CD432560.1|CD432560 ETH1_30_D08.g1_A002 Ethylene-treated... 103 3e-020
gb|CW139439.1|CW139439 104_529_11135238_148_34909_021 Sorgh... 100 5e-019
gb|CW215449.1|CW215449 104_647_11194545_116_37165_035 Sorgh... 100 5e-019
gb|CW248190.1|CW248190 104_709_11222168_116_35030_024 Sorgh... 100 5e-019
gb|CW248191.1|CW248191 104_709_11222168_148_35026_024 Sorgh... 100 5e-019
gb|BI643627.1|BI643627 DG1_92_B06.b1_A002 Dark Grown 1 (DG1... 100 5e-019
gb|CN138744.1|CN138744 OX1_13_D12.g1_A002 Oxidatively-stres... 100 5e-019
gb|CL150040.1|CL150040 104_331_10778242_114_31355_178 Sorgh... 98 2e-018
gb|CW268578.1|CW268578 104_739_11401384_116_35309_058 Sorgh... 98 2e-018
gb|CW365896.1|CW365896 fsbb001f038k07f0 Sorghum methylation... 98 2e-018
gb|AW676810.1|AW676810 DG1_1_F08.b1_A002 Dark Grown 1 (DG1)... 98 2e-018
gb|AW676903.1|AW676903 DG1_2_H05.b1_A002 Dark Grown 1 (DG1)... 98 2e-018
gb|BG240513.1|BG240513 OV1_30_H09.b1_A002 Ovary 1 (OV1) Sor... 98 2e-018
gb|BM323139.1|BM323139 PIC1_8_B06.b1_A002 Pathogen-infected... 98 2e-018
gb|BM323592.1|BM323592 PIC1_21_B02.b1_A002 Pathogen-infecte... 98 2e-018
gb|CW033159.1|CW033159 104_262_10501795_115_30362 Sorghum m... 96 8e-018
gb|CW155745.1|CW155745 104_558_11146303_116_36367_026 Sorgh... 96 8e-018
gb|CW226216.1|CW226216 104_664_11204768_116_37222_030 Sorgh... 96 8e-018
gb|CW238007.1|CW238007 104_694_11216489_148_37400_069 Sorgh... 96 8e-018
gb|CW457970.1|CW457970 fsbb001f204a10k0 Sorghum methylation... 96 8e-018
gb|BE125495.1|BE125495 DG1_27_A01.b1_A002 Dark Grown 1 (DG1... 96 8e-018
gb|BE360502.1|BE360502 DG1_64_A05.b1_A002 Dark Grown 1 (DG1... 96 8e-018
gb|CD463496.1|CD463496 ETH1_44_A03.g1_A002 Ethylene-treated... 96 8e-018
gb|CN133158.1|CN133158 OX1_10_B06.g1_A002 Oxidatively-stres... 96 8e-018
gb|CW301871.1|CW301871 104_785_11464426_148_36264_033 Sorgh... 94 3e-017
gb|BM323138.1|BM323138 PIC1_8_B05.b1_A002 Pathogen-infected... 94 3e-017
gb|CW173031.1|CW173031 104_584_11156623_116_36545_024 Sorgh... 92 1e-016
gb|CW177867.1|CW177867 104_591_11159260_116_36614_010 Sorgh... 92 1e-016
gb|CW415526.1|CW415526 fsbb001f115k18f0 Sorghum methylation... 92 1e-016
gb|CF675644.1|CF675644 GST3 Subtractive cDNA library from s... 92 1e-016
gb|BZ342179.1|BZ342179 ic81a06.b1 WGS-SbicolorF (JM107 adap... 90 5e-016
gb|BZ626753.1|BZ626753 ih48b09.b1 WGS-SbicolorF (DH5a methy... 90 5e-016
gb|CW512360.1|CW512360 115_1_10510471_1_30023 Sorghum unfil... 90 5e-016
gb|CW022096.1|CW022096 104_161_10431639_5_30007 Sorghum met... 90 5e-016
gb|CW036817.1|CW036817 104_268_10503984_115_30382 Sorghum m... 90 5e-016
gb|CW091410.1|CW091410 104_453_10998534_114_33029_025 Sorgh... 90 5e-016
gb|CW112321.1|CW112321 104_486_11104821_148_34541_093 Sorgh... 90 5e-016
gb|CW124983.1|CW124983 104_505_11112086_148_34712_063 Sorgh... 90 5e-016
gb|CW396616.1|CW396616 fsbb001f085c05k0 Sorghum methylation... 90 5e-016
gb|BE125671.1|BE125671 DG1_54_E06.b1_A002 Dark Grown 1 (DG1... 90 5e-016
gb|BE358825.1|BE358825 DG1_32_D11.b1_A002 Dark Grown 1 (DG1... 90 5e-016
gb|CD428130.1|CD428130 ETH1_32_C09.g1_A002 Ethylene-treated... 90 5e-016
gb|CD430702.1|CD430702 ETH1_20_G03.g1_A002 Ethylene-treated... 90 5e-016
gb|CN129302.1|CN129302 RHOH1_34_D09.g1_A002 Acid- and alkal... 90 5e-016
gb|CN134649.1|CN134649 OX1_27_D04.g1_A002 Oxidatively-stres... 90 5e-016
gb|CN143625.1|CN143625 WOUND1_17_A02.g1_A002 Wounded leaves... 90 5e-016
gb|CN149574.1|CN149574 WOUND1_63_D02.g1_A002 Wounded leaves... 90 5e-016
gb|CX610774.1|CX610774 ANR1_20_F02.g1_A002 Anaerobic roots ... 90 5e-016
gb|CW141121.1|CW141121 104_532_11136149_116_34932_031 Sorgh... 88 2e-015
gb|CW467395.1|CW467395 fsbb001f219b03k0 Sorghum methylation... 88 2e-015
gb|CW036911.1|CW036911 104_268_10504039_114_30381 Sorghum m... 84 3e-014
gb|CW292718.1|CW292718 104_772_11414235_116_35579_002 Sorgh... 84 3e-014
gb|CW247719.1|CW247719 104_708_11221917_116_36081_083 Sorgh... 78 2e-012
gb|CW302191.1|CW302191 104_786_11464593_116_35664_043 Sorgh... 78 2e-012
gb|CW492797.1|CW492797 fsbb001f283e08f0 Sorghum methylation... 78 2e-012
gb|AW677377.1|AW677377 DG1_6_A05.b1_A002 Dark Grown 1 (DG1)... 78 2e-012
gb|AW677398.1|AW677398 DG1_6_C05.b1_A002 Dark Grown 1 (DG1)... 78 2e-012
gb|AW923105.1|AW923105 DG1_49_F10.b1_A002 Dark Grown 1 (DG1... 78 2e-012
gb|BE358056.1|BE358056 DG1_24_E12.b1_A002 Dark Grown 1 (DG1... 78 2e-012
gb|BE358144.1|BE358144 DG1_24_E12.g1_A002 Dark Grown 1 (DG1... 78 2e-012
gb|CD222182.1|CD222182 CCC1_2_E09.g1_A007 Callus culture/ce... 78 2e-012
gb|CD222247.1|CD222247 CCC1_2_A06.g1_A007 Callus culture/ce... 78 2e-012
gb|CD225294.1|CD225294 CCC1_39_A01.g1_A007 Callus culture/c... 78 2e-012
gb|CN141237.1|CN141237 OX1_50_E02.b1_A002 Oxidatively-stres... 78 2e-012
gb|AW676991.1|AW676991 DG1_3_D10.b1_A002 Dark Grown 1 (DG1)... 76 7e-012
gb|BE358620.1|BE358620 DG1_30_F09.b1_A002 Dark Grown 1 (DG1... 76 7e-012
gb|CL171842.1|CL171842 104_374_10889715_148_31774_003 Sorgh... 74 3e-011
gb|CL178881.1|CL178881 104_387_10894905_116_31906_201 Sorgh... 74 3e-011
gb|CW141974.1|CW141974 104_533_11136596_148_34941_078 Sorgh... 74 3e-011
gb|CW401628.1|CW401628 fsbb001f092i09k0 Sorghum methylation... 74 3e-011
gb|CW415527.1|CW415527 fsbb001f115k18k0 Sorghum methylation... 74 3e-011
gb|AW286086.2|AW286086 LG1_261_C01.b1_A002 Light Grown 1 (L... 74 3e-011
gb|AW287684.2|AW287684 LG1_271_B05.b1_A002 Light Grown 1 (L... 74 3e-011
gb|BG412766.1|BG412766 OV2_34_E08.b1_A002 Ovary 2 (OV2) Sor... 74 3e-011
gb|BG557842.1|BG557842 EM1_55_A10.b1_A002 Embryo 1 (EM1) So... 74 3e-011
gb|CD430870.1|CD430870 ETH1_5_F09.g1_A002 Ethylene-treated ... 74 3e-011
gb|CD430899.1|CD430899 ETH1_5_E09.g1_A002 Ethylene-treated ... 74 3e-011
gb|CD463131.1|CD463131 ETH1_42_D03.g1_A002 Ethylene-treated... 74 3e-011
gb|CF427419.1|CF427419 PH1_1_A12.g1_A002 Phosphorous-defici... 74 3e-011
gb|CN132197.1|CN132197 OX1_4_D12.g1_A002 Oxidatively-stress... 74 3e-011
gb|CN137157.1|CN137157 OX1_55_B10.g1_A002 Oxidatively-stres... 74 3e-011
gb|CN139737.1|CN139737 OX1_23_G08.g1_A002 Oxidatively-stres... 74 3e-011
gb|CN141334.1|CN141334 OX1_50_G06.g1_A002 Oxidatively-stres... 74 3e-011
gb|CN142356.1|CN142356 WOUND1_9_B05.g1_A002 Wounded leaves ... 74 3e-011
gb|CN143356.1|CN143356 WOUND1_15_F02.g1_A002 Wounded leaves... 74 3e-011
gb|CN148797.1|CN148797 WOUND1_58_G11.g1_A002 Wounded leaves... 74 3e-011
gb|CN149218.1|CN149218 WOUND1_61_A02.g1_A002 Wounded leaves... 74 3e-011
gb|CW198655.1|CW198655 104_623_11183089_148_36841_007 Sorgh... 72 1e-010
gb|CW204527.1|CW204527 104_632_11186589_148_36922_087 Sorgh... 72 1e-010
gb|CW310091.1|CW310091 104_799_11469537_116_35745_045 Sorgh... 72 1e-010
gb|CW416582.1|CW416582 fsbb001f117d07f0 Sorghum methylation... 72 1e-010
gb|CW493277.1|CW493277 fsbb001f283p16f0 Sorghum methylation... 72 1e-010
gb|CN124436.1|CN124436 RHOH1_4_F03.g1_A002 Acid- and alkali... 72 1e-010
gb|CW090101.1|CW090101 104_435_10949088_114_32597_084 Sorgh... 70 4e-010
gb|CW090102.1|CW090102 104_435_10949088_116_32599_084 Sorgh... 70 4e-010
gb|CW256509.1|CW256509 104_721_11226831_148_35142_054 Sorgh... 70 4e-010
gb|BE125309.1|BE125309 DG1_19_A01.b1_A002 Dark Grown 1 (DG1... 70 4e-010
gb|CW139438.1|CW139438 104_529_11135238_116_34905_021 Sorgh... 68 2e-009
gb|CW310613.1|CW310613 104_799_11469805_148_37433_049 Sorgh... 68 2e-009
gb|CW321790.1|CW321790 104_815_11475741_148_35942_091 Sorgh... 68 2e-009
gb|CD431749.1|CD431749 ETH1_10_F11.g1_A002 Ethylene-treated... 68 2e-009
gb|CD463182.1|CD463182 ETH1_42_F03.g1_A002 Ethylene-treated... 68 2e-009
gb|CN143544.1|CN143544 WOUND1_17_A02.b1_A002 Wounded leaves... 68 2e-009
gb|CL172252.1|CL172252 104_374_10890016_116_31775_304 Sorgh... 66 7e-009
gb|CW467394.1|CW467394 fsbb001f219b03f0 Sorghum methylation... 66 7e-009
gb|BG557514.1|BG557514 EM1_54_B10.b1_A002 Embryo 1 (EM1) So... 66 7e-009
gb|BG559403.1|BG559403 RHIZ2_54_D07.b1_A003 Rhizome2 (RHIZ2... 66 7e-009
gb|CD220847.1|CD220847 CCC1_69_F04.g1_A007 Callus culture/c... 66 7e-009
gb|CN129214.1|CN129214 RHOH1_34_D09.b3_A002 Acid- and alkal... 66 7e-009
gb|CN134563.1|CN134563 OX1_27_D04.b1_A002 Oxidatively-stres... 66 7e-009
gb|CN145377.1|CN145377 WOUND1_28_C01.g1_A002 Wounded leaves... 66 7e-009
gb|CW137234.1|CW137234 104_523_11119182_148_34867_023 Sorgh... 62 1e-007
gb|AW677154.1|AW677154 DG1_5_C08.b1_A002 Dark Grown 1 (DG1)... 62 1e-007
gb|AW923329.1|AW923329 DG1_51_F12.b1_A002 Dark Grown 1 (DG1... 62 1e-007
gb|BE361727.1|BE361727 DG1_82_F09.b1_A002 Dark Grown 1 (DG1... 62 1e-007
gb|BE363072.1|BE363072 DG1_9_F01.b1_A002 Dark Grown 1 (DG1)... 62 1e-007
gb|BI643620.1|BI643620 DG1_91_G03.b1_A002 Dark Grown 1 (DG1... 62 1e-007
gb|CD463437.1|CD463437 ETH1_44_B03.g1_A002 Ethylene-treated... 62 1e-007
gb|CN124361.1|CN124361 RHOH1_4_F03.b1_A002 Acid- and alkali... 62 1e-007
gb|CN127401.1|CN127401 RHOH1_22_G02.g3_A002 Acid- and alkal... 62 1e-007
gb|CN129060.1|CN129060 RHOH1_33_F09.b3_A002 Acid- and alkal... 62 1e-007
gb|CN130350.1|CN130350 RHOH1_40_H08.g1_A002 Acid- and alkal... 62 1e-007
gb|CX621928.1|CX621928 GABR1_61_B06.b2_A002 GA- or brassino... 62 1e-007
gb|CX622055.1|CX622055 GABR1_61_F04.g2_A002 GA- or brassino... 62 1e-007
gb|BF705100.1|BF705100 RHIZ2_1_D07.b1_A003 Rhizome2 (RHIZ2)... 60 4e-007
gb|BF705368.1|BF705368 RHIZ2_3_B07.b1_A003 Rhizome2 (RHIZ2)... 60 4e-007
gb|CX610689.1|CX610689 ANR1_20_F02.b1_A002 Anaerobic roots ... 60 4e-007
gb|CW024958.1|CW024958 104_226_10487881_116_30524 Sorghum m... 58 2e-006
gb|CW161070.1|CW161070 104_567_11150217_148_36416_033 Sorgh... 58 2e-006
gb|CW184129.1|CW184129 104_600_11164988_116_36688_076 Sorgh... 58 2e-006
gb|CW190530.1|CW190530 104_612_11174553_148_36834_043 Sorgh... 58 2e-006
gb|BG557805.1|BG557805 EM1_53_E01.b1_A002 Embryo 1 (EM1) So... 58 2e-006
gb|CD232788.1|CD232788 SS1_1_C02.g1_A012 Salt-stressed seed... 58 2e-006
gb|CD429152.1|CD429152 ETH1_2_D06.g1_A002 Ethylene-treated ... 58 2e-006
gb|CD430586.1|CD430586 ETH1_19_E05.g1_A002 Ethylene-treated... 58 2e-006
gb|CX610269.1|CX610269 ANR1_17_D05.g1_A002 Anaerobic roots ... 58 2e-006
gb|CX622414.1|CX622414 GABR1_63_G05.g2_A002 GA- or brassino... 58 2e-006
gb|CW023422.1|CW023422 104_163_10432441_1_30001 Sorghum met... 56 7e-006
gb|CW035319.1|CW035319 104_265_10503086_114_30378 Sorghum m... 56 7e-006
gb|CW067572.1|CW067572 104_315_10524361_114_30124 Sorghum m... 56 7e-006
gb|CW304182.1|CW304182 104_789_11465646_148_35708_031 Sorgh... 56 7e-006
gb|CW386824.1|CW386824 fsbb001f070o12f0 Sorghum methylation... 56 7e-006
gb|BE357599.1|BE357599 DG1_21_C03.b1_A002 Dark Grown 1 (DG1... 56 7e-006
gb|BE362489.1|BE362489 DG1_87_C06.b1_A002 Dark Grown 1 (DG1... 56 7e-006
gb|CD431093.1|CD431093 ETH1_6_H02.g1_A002 Ethylene-treated ... 56 7e-006
gb|CD462982.1|CD462982 ETH1_41_C06.g1_A002 Ethylene-treated... 56 7e-006
gb|CN130948.1|CN130948 RHOH1_44_H12.g1_A002 Acid- and alkal... 56 7e-006
gb|CN132388.1|CN132388 OX1_5_H04.g1_A002 Oxidatively-stress... 56 7e-006
gb|CN141293.1|CN141293 OX1_50_C03.g1_A002 Oxidatively-stres... 56 7e-006
gb|CW180136.1|CW180136 104_594_11160476_148_36633_072 Sorgh... 54 3e-005
gb|CW218302.1|CW218302 104_651_11196114_116_37067_065 Sorgh... 54 3e-005
gb|CW218303.1|CW218303 104_651_11196114_116_37459_065 Sorgh... 54 3e-005
gb|CW218304.1|CW218304 104_651_11196114_148_37066_065 Sorgh... 54 3e-005
gb|CW218305.1|CW218305 104_651_11196114_148_37458_065 Sorgh... 54 3e-005
gb|AW677374.1|AW677374 DG1_6_A02.b1_A002 Dark Grown 1 (DG1)... 54 3e-005
gb|BG411605.1|BG411605 EM1_58_H08.b1_A002 Embryo 1 (EM1) So... 54 3e-005
gb|BE362928.2|BE362928 DG1_91_A07.b1_A002 Dark Grown 1 (DG1... 54 3e-005
gb|CN134143.1|CN134143 OX1_20_B11.g1_A002 Oxidatively-stres... 54 3e-005
gb|CX620716.1|CX620716 GABR1_53_C06.g1_A002 GA- or brassino... 54 3e-005
gb|CL157162.1|CL157162 104_344_10783358_114_31373_302 Sorgh... 52 1e-004
gb|CL157163.1|CL157163 104_344_10783358_116_31374_302 Sorgh... 52 1e-004
gb|CW098399.1|CW098399 104_464_11002986_116_34363_065 Sorgh... 52 1e-004
gb|CW098400.1|CW098400 104_464_11002986_148_34367_065 Sorgh... 52 1e-004
gb|CW173032.1|CW173032 104_584_11156623_148_36546_024 Sorgh... 52 1e-004
gb|CW174398.1|CW174398 104_586_11157384_116_36561_088 Sorgh... 52 1e-004
gb|CW220174.1|CW220174 104_654_11197212_116_37148_036 Sorgh... 52 1e-004
gb|CW238006.1|CW238006 104_694_11216489_116_37395_069 Sorgh... 52 1e-004
gb|CW252883.1|CW252883 104_716_11224767_148_35098_060 Sorgh... 52 1e-004
gb|CW310092.1|CW310092 104_799_11469537_148_35749_045 Sorgh... 52 1e-004
gb|CW447900.1|CW447900 fsbb001f181d19k0 Sorghum methylation... 52 1e-004
gb|CW454471.1|CW454471 fsbb001f198o23k0 Sorghum methylation... 52 1e-004
gb|BG239935.1|BG239935 OV1_30_H09.g1_A002 Ovary 1 (OV1) Sor... 52 1e-004
gb|CN138525.1|CN138525 OX1_64_G04.b1_A002 Oxidatively-stres... 52 1e-004
gb|CW273304.1|CW273304 104_745_11403819_116_35356_004 Sorgh... 50 4e-004
gb|CW304181.1|CW304181 104_789_11465646_116_35704_031 Sorgh... 50 4e-004
gb|BG558048.1|BG558048 RHIZ2_66_A02.g1_A003 Rhizome2 (RHIZ2... 50 4e-004
gb|CN138660.1|CN138660 OX1_13_D12.b1_A002 Oxidatively-stres... 50 4e-004
gb|BZ332713.1|BZ332713 hx30b08.g1 WGS-SbicolorF (JM107 adap... 48 0.002
gb|CW157339.1|CW157339 104_560_11147178_116_36386_069 Sorgh... 48 0.002
gb|CW218492.1|CW218492 104_652_11196219_116_37460_014 Sorgh... 48 0.002
gb|CW279627.1|CW279627 104_754_11407179_148_35439_008 Sorgh... 48 0.002
gb|CW446759.1|CW446759 fsbb001f179j05f0 Sorghum methylation... 48 0.002
gb|CW486287.1|CW486287 fsbb001f249h09f0 Sorghum methylation... 48 0.002
gb|CN124295.1|CN124295 RHOH1_3_G12.g1_A002 Acid- and alkali... 48 0.002
gb|CN125978.1|CN125978 RHOH1_14_A10.g1_A002 Acid- and alkal... 48 0.002
gb|CN130505.1|CN130505 RHOH1_42_A05.b1_A002 Acid- and alkal... 48 0.002
gb|CN141562.1|CN141562 OX1_52_A06.g1_A002 Oxidatively-stres... 48 0.002
gb|CN145297.1|CN145297 WOUND1_28_C01.b2_A002 Wounded leaves... 48 0.002
gb|CX609701.1|CX609701 ANR1_14_F01.b1_A002 Anaerobic roots ... 48 0.002
gb|CX622518.1|CX622518 GABR1_64_A06.g2_A002 GA- or brassino... 48 0.002
gb|BE358852.1|BE358852 DG1_32_D11.g1_A002 Dark Grown 1 (DG1... 46 0.006
gb|CN127318.1|CN127318 RHOH1_22_G02.b1_A002 Acid- and alkal... 46 0.006
gb|CL175363.1|CL175363 104_380_10892393_148_31766_377 Sorgh... 44 0.025
gb|CL179734.1|CL179734 104_389_10895515_148_31907_043 Sorgh... 44 0.025
gb|CL183364.1|CL183364 104_395_10898123_114_31917_347 Sorgh... 44 0.025
gb|CW141973.1|CW141973 104_533_11136596_116_34937_078 Sorgh... 44 0.025
gb|CW301983.1|CW301983 104_786_11464484_148_35667_080 Sorgh... 44 0.025
gb|CW426646.1|CW426646 fsbb001f138c14f0 Sorghum methylation... 44 0.025
gb|CL173618.1|CL173618 104_377_10891001_148_31792_137 Sorgh... 42 0.098
gb|CW023423.1|CW023423 104_163_10432441_5_30009 Sorghum met... 42 0.098
gb|CW035320.1|CW035320 104_265_10503086_115_30379 Sorghum m... 42 0.098
gb|CW097287.1|CW097287 104_463_11002374_116_34345_025 Sorgh... 42 0.098
gb|CW386825.1|CW386825 fsbb001f070o12k0 Sorghum methylation... 42 0.098
gb|CW439222.1|CW439222 fsbb001f157e04f0 Sorghum methylation... 42 0.098
gb|CW457483.1|CW457483 fsbb001f203f04f0 Sorghum methylation... 42 0.098
gb|CW496603.1|CW496603 fsbb001f288o23k0 Sorghum methylation... 42 0.098
gb|AW671936.1|AW671936 LG1_353_D11.b1_A002 Light Grown 1 (L... 42 0.098
gb|BE352946.1|BE352946 DG1_1_F08.g1_A002 Dark Grown 1 (DG1)... 42 0.098
gb|BE359585.1|BE359585 DG1_54_E06.g2_A002 Dark Grown 1 (DG1... 42 0.098
gb|BE362589.1|BE362589 DG1_87_C06.g1_A002 Dark Grown 1 (DG1... 42 0.098
gb|BM322375.1|BM322375 PIC1_4_A05.b1_A002 Pathogen-infected... 42 0.098
gb|CD429806.1|CD429806 ETH1_15_D01.g1_A002 Ethylene-treated... 42 0.098
gb|CD430957.1|CD430957 ETH1_6_H02.b1_A002 Ethylene-treated ... 42 0.098
gb|CD432036.1|CD432036 ETH1_12_D09.g1_A002 Ethylene-treated... 42 0.098
gb|CW032163.1|CW032163 104_261_10501223_115_30364 Sorghum m... 40 0.39
gb|CW033634.1|CW033634 104_263_10502071_114_30359 Sorghum m... 40 0.39
gb|CW155746.1|CW155746 104_558_11146303_148_36368_026 Sorgh... 40 0.39
gb|CW209075.1|CW209075 104_638_11189032_148_36983_050 Sorgh... 40 0.39
gb|CW230586.1|CW230586 104_679_11210644_116_37485_008 Sorgh... 40 0.39
gb|CW252633.1|CW252633 104_715_11224618_148_35091_033 Sorgh... 40 0.39
gb|CW292080.1|CW292080 104_772_11413895_116_35577_096 Sorgh... 40 0.39
gb|CW311029.1|CW311029 104_800_11470021_116_35753_057 Sorgh... 40 0.39
gb|CW311030.1|CW311030 104_800_11470021_148_35757_057 Sorgh... 40 0.39
gb|CW338488.1|CW338488 104_838_11484773_116_36122_017 Sorgh... 40 0.39
gb|CW370296.1|CW370296 fsbb001f045c09k0 Sorghum methylation... 40 0.39
gb|CW395210.1|CW395210 fsbb001f083c11f0 Sorghum methylation... 40 0.39
gb|BE356065.1|BE356065 DG1_122_C07.b1_A002 Dark Grown 1 (DG... 40 0.39
gb|BE360387.1|BE360387 DG1_63_F11.b1_A002 Dark Grown 1 (DG1... 40 0.39
gb|BE593909.1|BE593909 WS1_103_H02.g1_A002 Water-stressed 1... 40 0.39
gb|BE594226.1|BE594226 WS1_103_H02.b1_A002 Water-stressed 1... 40 0.39
gb|CD463102.1|CD463102 ETH1_42_D08.b1_A002 Ethylene-treated... 40 0.39
gb|CD463195.1|CD463195 ETH1_42_D08.g1_A002 Ethylene-treated... 40 0.39
gb|CN132861.1|CN132861 OX1_8_E01.g1_A002 Oxidatively-stress... 40 0.39
gb|CN134135.1|CN134135 OX1_20_B02.g1_A002 Oxidatively-stres... 40 0.39
gb|CN139739.1|CN139739 OX1_23_G10.g1_A002 Oxidatively-stres... 40 0.39
>gb|CD463838.1|CD463838 ETH1_47_F10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_47_F10_A002 3', mRNA sequence
Length = 763
Score = 704 bits (355), Expect = 0.0
Identities = 500/548 (91%), Gaps = 14/548 (2%)
Strand = Plus / Plus
Query: 240 caagtccaacccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagtccaacccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctg 60
Query: 300 cgagtcactcgtcatcatgcagtacgtcgacgagctgttcgccggccggccgatcctccc 359
||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||
Sbjct: 61 tgagtcactcgtcatcctgcagtacgtcgacgagctgttcgctggccggtcgatccttcc 120
Query: 360 aaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaagtt 419
| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 agccgaccccttcgagcgcgccactgctcgcttctgggctgcctacgtcgacgacaagtt 180
Query: 420 gtttccagcgtggtacggcatggtgaaggcccaggcggaggaggagagggcggagaaggc 479
||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 181 gttcccggcgtggtacggcatggtgaaagcccaggcggaggaggagagggcggagaaggt 240
Query: 480 gaaggagacgctcgccgccatcgagcacatggaagtgaccttcgccaagtgctccgg--- 536
|||||| ||||| ||||| |||||| | ||||||||| |||||||||||||||||||
Sbjct: 241 gaaggaaacgcttgccgcaatcgagaaaatggaagtggccttcgccaagtgctccggcaa 300
Query: 537 cggcaa---cgccttcttcggtggcgactccatcggctacgtcgacatcgtgctgacgtg 593
|||||| |||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 301 cggcaacgccgccttcttcggtggcgactccattggctacgtcgacatcg--------tg 352
Query: 594 ctcggctccttcttgttctggttcgaggcggtgcgcagggttttcgacctggagatcatt 653
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 353 ctcggctccttcttgttctggttcgaggcggtgcgcagggttgacggcctggagatcatt 412
Query: 654 aacgctagcaagactccgctgttggctgcgtgggcggagcggtttgtagggactgtagaa 713
|||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||
Sbjct: 413 gacgcgagcaagactccgctcttggctgcgtgggcggagcggtttggagggagtgtagaa 472
Query: 714 gcgaaggaggtggtgccgttgcccacggcggacatggcggtacagtacatcaataagctt 773
|||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 473 gcgaaggaggtggtgccggtgcctgaggcggacttggcggtacagtacatcaataagttt 532
Query: 774 catgcccc 781
| ||||||
Sbjct: 533 cgtgcccc 540
Score = 42.1 bits (21), Expect = 0.098
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 934 cagtcgtctcctctgcaataaatat 958
||||||||| |||||||||||||||
Sbjct: 729 cagtcgtctgctctgcaataaatat 753
Score = 40.1 bits (20), Expect = 0.39
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 865 aattccaaccgaataatgtt 884
||||||||||||||||||||
Sbjct: 638 aattccaaccgaataatgtt 657
>gb|CD463985.1|CD463985 ETH1_47_F10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_47_F10_A002 5', mRNA sequence
Length = 598
Score = 702 bits (354), Expect = 0.0
Identities = 490/535 (91%), Gaps = 14/535 (2%)
Strand = Plus / Plus
Query: 93 ggaaacaatggcgggcaaggagggtcttaaggtcctcggcctgcaggtgagcccgttcgt 152
|||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||||
Sbjct: 72 ggaaacaatggcggacaaggaggatcttaagctcctcggcctgcagctgagcccgttcgt 131
Query: 153 gctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacgagtacgtcgaggagga 212
| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 132 gatccgcgtgtgcatggcgctgaccatgaaaggagtgagtttcgagtacgtcgaggagga 191
Query: 213 catatccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgt 272
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cctgaacaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgt 251
Query: 273 gctcatccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacga 332
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 252 gctcatccacaacggtaagcccatctgtgagtcactcgtcatcctgcagtacgtcgacga 311
Query: 333 gctgttcgccggccggccgatcctcccaaccgacccctacgagcgcgccactgctcgctt 392
||||||||| |||||| ||||||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 312 gctgttcgctggccggtcgatccttccagccgaccccttcgagcgcgccactgctcgctt 371
Query: 393 ctgggctgcctacgccgacgacaagttgtttccagcgtggtacggcatggtgaaggccca 452
|||||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 372 ctgggctgcctacgtcgacgacaagttgttcccggcgtggtacggcatggtgaaagccca 431
Query: 453 ggcggaggaggagagggcggagaaggcgaaggagacgctcgccgccatcgagcacatgga 512
|||||||||||||||||||||||||| |||||| ||||| ||||| |||||| | |||||
Sbjct: 432 ggcggaggaggagagggcggagaaggtgaaggaaacgcttgccgcaatcgagaaaatgga 491
Query: 513 agtgaccttcgccaagtgctccgg---cggcaa---cgccttcttcggtggcgactccat 566
|||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 492 agtggccttcgccaagtgctccggcaacggcaacgccgccttcttcggtggcgactccat 551
Query: 567 cggctacgtcgacatcgtgctgacgtgctcggctccttcttgttctggttcgagg 621
|||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 552 tggctacgtcgacatcg--------tgctcggctccttcttgttctggttcgagg 598
>gb|CW168013.1|CW168013 104_577_11153917_148_36492_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153917, DNA
sequence
Length = 635
Score = 486 bits (245), Expect = e-135
Identities = 305/325 (93%)
Strand = Plus / Plus
Query: 93 ggaaacaatggcgggcaaggagggtcttaaggtcctcggcctgcaggtgagcccgttcgt 152
|||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||||
Sbjct: 135 ggaaacaatggcggacaaggaggatcttaagctcctcggcctgcagctgagcccgttcgt 194
Query: 153 gctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacgagtacgtcgaggagga 212
| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 195 gatccgcgtgtgcatggcgctgaccatgaaaggagtgagtttcgagtacgtcgaggagga 254
Query: 213 catatccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgt 272
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cctgaacaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgt 314
Query: 273 gctcatccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacga 332
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 315 gctcatccacaacggtaagcccatctgtgagtcactcgtcatcctgcagtacgtcgacga 374
Query: 333 gctgttcgccggccggccgatcctcccaaccgacccctacgagcgcgccactgctcgctt 392
||||||||| |||||| ||||||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 375 gctgttcgctggccggtcgatccttccagccgaccccttcgagcgcgccactgctcgctt 434
Query: 393 ctgggctgcctacgccgacgacaag 417
|||||||||||||| ||||||||||
Sbjct: 435 ctgggctgcctacgtcgacgacaag 459
Score = 113 bits (57), Expect = 3e-023
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 416 agttgtttccagcgtggtacggcatggtgaaggcccaggcggaggaggagagggcggaga 475
||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 555 agttgttcccggcgtggtacggcatggtgaaagcccaggcggaggaggagagggcggaga 614
Query: 476 aggcgaaggagacgctcgccg 496
||| |||||| ||||| ||||
Sbjct: 615 aggtgaaggaaacgcttgccg 635
Score = 56.0 bits (28), Expect = 7e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 tcttgcacagactcggagcaagataggcctag 38
||||||||||||||||||||||||||| ||||
Sbjct: 40 tcttgcacagactcggagcaagataggactag 71
>gb|CW224877.1|CW224877 104_662_11204056_116_37206_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204056, DNA
sequence
Length = 716
Score = 486 bits (245), Expect = e-135
Identities = 305/325 (93%)
Strand = Plus / Plus
Query: 93 ggaaacaatggcgggcaaggagggtcttaaggtcctcggcctgcaggtgagcccgttcgt 152
|||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||||
Sbjct: 352 ggaaacaatggcggacaaggaggatcttaagctcctcggcctgcagctgagcccgttcgt 411
Query: 153 gctccgcgtgtgcttggcgctgaacatgaaaggagtgagttacgagtacgtcgaggagga 212
| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 412 gatccgcgtgtgcatggcgctgaccatgaaaggagtgagtttcgagtacgtcgaggagga 471
Query: 213 catatccaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgt 272
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cctgaacaacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgt 531
Query: 273 gctcatccacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacga 332
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 532 gctcatccacaacggtaagcccatctgtgagtcactcgtcatcctgcagtacgtcgacga 591
Query: 333 gctgttcgccggccggccgatcctcccaaccgacccctacgagcgcgccactgctcgctt 392
||||||||| |||||| ||||||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 592 gctgttcgctggccggtcgatccttccagccgaccccttcgagcgcgccactgctcgctt 651
Query: 393 ctgggctgcctacgccgacgacaag 417
|||||||||||||| ||||||||||
Sbjct: 652 ctgggctgcctacgtcgacgacaag 676
Score = 56.0 bits (28), Expect = 7e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 tcttgcacagactcggagcaagataggcctag 38
||||||||||||||||||||||||||| ||||
Sbjct: 257 tcttgcacagactcggagcaagataggactag 288
>gb|CD428784.1|CD428784 ETH1_36_F06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_36_F06_A002 3', mRNA sequence
Length = 601
Score = 452 bits (228), Expect = e-125
Identities = 352/393 (89%), Gaps = 14/393 (3%)
Strand = Plus / Plus
Query: 395 gggctgcctacgccgacgacaagttgtttccagcgtggtacggcatggtgaaggcccagg 454
|||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct: 1 gggctgcctacgtcgacgacaagttgttcccggcgtggtacggcatggtgaaagcccagg 60
Query: 455 cggaggaggagagggcggagaaggcgaaggagacgctcgccgccatcgagcacatggaag 514
|||||||||||||||||||||||| |||||| ||||| ||||| |||||| | |||||||
Sbjct: 61 cggaggaggagagggcggagaaggtgaaggaaacgcttgccgcaatcgagaaaatggaag 120
Query: 515 tgaccttcgccaagtgctccggc---ggcaacgcc---ttcttcggtggcgactccatcg 568
|| |||||||||||||||||||| ||||||||| |||||||||||||||||||| |
Sbjct: 121 tggccttcgccaagtgctccggcaacggcaacgccgccttcttcggtggcgactccattg 180
Query: 569 gctacgtcgacatcgtgctgacgtgctcggctccttcttgttctggttcgaggcggtgcg 628
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 gctacgtcgacatcgtg--------ctcggctccttcttgttctggttcgaggcggtgcg 232
Query: 629 cagggttttcgacctggagatcattaacgctagcaagactccgctgttggctgcgtgggc 688
||||||| || ||||||||||||| |||| |||||||||||||| ||||||||||||||
Sbjct: 233 cagggttgacggcctggagatcattgacgcgagcaagactccgctcttggctgcgtgggc 292
Query: 689 ggagcggtttgtagggactgtagaagcgaaggaggtggtgccgttgcccacggcggacat 748
||||||||||| ||||| ||||||||||||||||||||||||| |||| ||||||| |
Sbjct: 293 ggagcggtttggagggagtgtagaagcgaaggaggtggtgccggtgcctgaggcggactt 352
Query: 749 ggcggtacagtacatcaataagcttcatgcccc 781
|||||||||||||||||||||| ||| ||||||
Sbjct: 353 ggcggtacagtacatcaataagtttcgtgcccc 385
Score = 42.1 bits (21), Expect = 0.098
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 934 cagtcgtctcctctgcaataaatat 958
||||||||| |||||||||||||||
Sbjct: 574 cagtcgtctgctctgcaataaatat 598
Score = 40.1 bits (20), Expect = 0.39
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 865 aattccaaccgaataatgtt 884
||||||||||||||||||||
Sbjct: 483 aattccaaccgaataatgtt 502
>gb|BM330345.1|BM330345 PIC1_50_G02.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 545
Score = 434 bits (219), Expect = e-120
Identities = 340/380 (89%), Gaps = 14/380 (3%)
Strand = Plus / Plus
Query: 408 cgacgacaagttgtttccagcgtggtacggcatggtgaaggcccaggcggaggaggagag 467
||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2 cgacgacaagttgttcccggcgtggtacggcatggtgaaagcccaggcggaggaggagag 61
Query: 468 ggcggagaaggcgaaggagacgctcgccgccatcgagcacatggaagtgaccttcgccaa 527
||||||||||| |||||| ||||| ||||| |||||| | ||||||||| ||||||||||
Sbjct: 62 ggcggagaaggtgaaggaaacgcttgccgcaatcgagaaaatggaagtggccttcgccaa 121
Query: 528 gtgctccggc---ggcaacgcc---ttcttcggtggcgactccatcggctacgtcgacat 581
|||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 122 gtgctccggcaacggcaacgccgccttcttcggtggcgactccattggctacgtcgacat 181
Query: 582 cgtgctgacgtgctcggctccttcttgttctggttcgaggcggtgcgcagggttttcgac 641
|||| |||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 182 cgtg--------ctcggctccttcttgttctggttcgaggcggtgcgcagggttgacggc 233
Query: 642 ctggagatcattaacgctagcaagactccgctgttggctgcgtgggcggagcggtttgta 701
|||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 234 ctggagatcattgacgcgagcaagactccgctcttggctgcgtgggcggagcggtttgga 293
Query: 702 gggactgtagaagcgaaggaggtggtgccgttgcccacggcggacatggcggtacagtac 761
|||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||
Sbjct: 294 gggagtgtagaagcgaaggaggtggtgccggtgcctgaggcggacttggcggtacagtac 353
Query: 762 atcaataagcttcatgcccc 781
||||||||| ||| ||||||
Sbjct: 354 atcaataagtttcgtgcccc 373
Score = 40.1 bits (20), Expect = 0.39
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 865 aattccaaccgaataatgtt 884
||||||||||||||||||||
Sbjct: 471 aattccaaccgaataatgtt 490
>gb|CF071635.1|CF071635 FE1_17_D03.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_17_D03_A002 5', mRNA sequence
Length = 630
Score = 434 bits (219), Expect = e-120
Identities = 340/380 (89%), Gaps = 14/380 (3%)
Strand = Plus / Minus
Query: 408 cgacgacaagttgtttccagcgtggtacggcatggtgaaggcccaggcggaggaggagag 467
||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 626 cgacgacaagttgttcccggcgtggtacggcatggtgaaagcccaggcggaggaggagag 567
Query: 468 ggcggagaaggcgaaggagacgctcgccgccatcgagcacatggaagtgaccttcgccaa 527
||||||||||| |||||| ||||| ||||| |||||| | ||||||||| ||||||||||
Sbjct: 566 ggcggagaaggtgaaggaaacgcttgccgcaatcgagaaaatggaagtggccttcgccaa 507
Query: 528 gtgctccggc---ggcaacgcc---ttcttcggtggcgactccatcggctacgtcgacat 581
|||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 506 gtgctccggcaacggcaacgccgccttcttcggtggcgactccattggctacgtcgacat 447
Query: 582 cgtgctgacgtgctcggctccttcttgttctggttcgaggcggtgcgcagggttttcgac 641
|||| |||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 446 cgtg--------ctcggctccttcttgttctggttcgaggcggtgcgcagggttgacggc 395
Query: 642 ctggagatcattaacgctagcaagactccgctgttggctgcgtgggcggagcggtttgta 701
|||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 394 ctggagatcattgacgcgagcaagactccgctcttggctgcgtgggcggagcggtttgga 335
Query: 702 gggactgtagaagcgaaggaggtggtgccgttgcccacggcggacatggcggtacagtac 761
|||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||
Sbjct: 334 gggagtgtagaagcgaaggaggtggtgccggtgcctgaggcggacttggcggtacagtac 275
Query: 762 atcaataagcttcatgcccc 781
||||||||| ||| ||||||
Sbjct: 274 atcaataagtttcgtgcccc 255
Score = 42.1 bits (21), Expect = 0.098
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 934 cagtcgtctcctctgcaataaatat 958
||||||||| |||||||||||||||
Sbjct: 66 cagtcgtctgctctgcaataaatat 42
Score = 40.1 bits (20), Expect = 0.39
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 865 aattccaaccgaataatgtt 884
||||||||||||||||||||
Sbjct: 157 aattccaaccgaataatgtt 138
>gb|CW224878.1|CW224878 104_662_11204056_148_37205_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204056, DNA
sequence
Length = 653
Score = 418 bits (211), Expect = e-115
Identities = 332/372 (89%), Gaps = 14/372 (3%)
Strand = Plus / Minus
Query: 416 agttgtttccagcgtggtacggcatggtgaaggcccaggcggaggaggagagggcggaga 475
||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 535 agttgttcccggcgtggtacggcatggtgaaagcccaggcggaggaggagagggcggaga 476
Query: 476 aggcgaaggagacgctcgccgccatcgagcacatggaagtgaccttcgccaagtgctccg 535
||| |||||| ||||| ||||| |||||| | ||||||||| ||||||||||||||||||
Sbjct: 475 aggtgaaggaaacgcttgccgcaatcgagaaaatggaagtggccttcgccaagtgctccg 416
Query: 536 gc---ggcaacgcc---ttcttcggtggcgactccatcggctacgtcgacatcgtgctga 589
|| ||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 415 gcaacggcaacgccgccttcttcggtggcgactccattggctacgtcgacatcgtg---- 360
Query: 590 cgtgctcggctccttcttgttctggttcgaggcggtgcgcagggttttcgacctggagat 649
|||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 359 ----ctcggctccttcttgttctggttcgaggcggtgcgcagggttgacggcctggagat 304
Query: 650 cattaacgctagcaagactccgctgttggctgcgtgggcggagcggtttgtagggactgt 709
|||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||
Sbjct: 303 cattgacgcgagcaagactccgctcttggctgcgtgggcggagcggtttggagggagtgt 244
Query: 710 agaagcgaaggaggtggtgccgttgcccacggcggacatggcggtacagtacatcaataa 769
|||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||
Sbjct: 243 agaagcgaaggaggtggtgccggtgcctgaggcggacttggcggtacagtacatcaataa 184
Query: 770 gcttcatgcccc 781
| ||| ||||||
Sbjct: 183 gtttcgtgcccc 172
Score = 40.1 bits (20), Expect = 0.39
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 865 aattccaaccgaataatgtt 884
||||||||||||||||||||
Sbjct: 74 aattccaaccgaataatgtt 55
>gb|CW290371.1|CW290371 104_769_11412975_116_35553_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412975, DNA
sequence
Length = 638
Score = 418 bits (211), Expect = e-115
Identities = 332/372 (89%), Gaps = 14/372 (3%)
Strand = Plus / Plus
Query: 416 agttgtttccagcgtggtacggcatggtgaaggcccaggcggaggaggagagggcggaga 475
||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 183 agttgttcccggcgtggtacggcatggtgaaagcccaggcggaggaggagagggcggaga 242
Query: 476 aggcgaaggagacgctcgccgccatcgagcacatggaagtgaccttcgccaagtgctccg 535
||| |||||| ||||| ||||| |||||| | ||||||||| ||||||||||||||||||
Sbjct: 243 aggtgaaggaaacgcttgccgcaatcgagaaaatggaagtggccttcgccaagtgctccg 302
Query: 536 gc---ggcaacgcc---ttcttcggtggcgactccatcggctacgtcgacatcgtgctga 589
|| ||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 303 gcaacggcaacgccgccttcttcggtggcgactccattggctacgtcgacatcgtg---- 358
Query: 590 cgtgctcggctccttcttgttctggttcgaggcggtgcgcagggttttcgacctggagat 649
|||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 359 ----ctcggctccttcttgttctggttcgaggcggtgcgcagggttgacggcctggagat 414
Query: 650 cattaacgctagcaagactccgctgttggctgcgtgggcggagcggtttgtagggactgt 709
|||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||
Sbjct: 415 cattgacgcgagcaagactccgctcttggctgcgtgggcggagcggtttggagggagtgt 474
Query: 710 agaagcgaaggaggtggtgccgttgcccacggcggacatggcggtacagtacatcaataa 769
|||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||
Sbjct: 475 agaagcgaaggaggtggtgccggtgcctgaggcggacttggcggtacagtacatcaataa 534
Query: 770 gcttcatgcccc 781
| ||| ||||||
Sbjct: 535 gtttcgtgcccc 546
Score = 125 bits (63), Expect = 9e-027
Identities = 81/87 (93%)
Strand = Plus / Plus
Query: 331 gagctgttcgccggccggccgatcctcccaaccgacccctacgagcgcgccactgctcgc 390
||||||||||| |||||| ||||||| ||| ||||||||| |||||||||||||||||||
Sbjct: 1 gagctgttcgctggccggtcgatccttccagccgaccccttcgagcgcgccactgctcgc 60
Query: 391 ttctgggctgcctacgccgacgacaag 417
|||||||||||||||| ||||||||||
Sbjct: 61 ttctgggctgcctacgtcgacgacaag 87
>gb|CW459012.1|CW459012 fsbb001f205i21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f205i21, DNA
sequence
Length = 673
Score = 418 bits (211), Expect = e-115
Identities = 332/372 (89%), Gaps = 14/372 (3%)
Strand = Plus / Minus
Query: 416 agttgtttccagcgtggtacggcatggtgaaggcccaggcggaggaggagagggcggaga 475
||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 664 agttgttcccggcgtggtacggcatggtgaaagcccaggcggaggaggagagggcggaga 605
Query: 476 aggcgaaggagacgctcgccgccatcgagcacatggaagtgaccttcgccaagtgctccg 535
||| |||||| ||||| ||||| |||||| | ||||||||| ||||||||||||||||||
Sbjct: 604 aggtgaaggaaacgcttgccgcaatcgagaaaatggaagtggccttcgccaagtgctccg 545
Query: 536 gc---ggcaacgcc---ttcttcggtggcgactccatcggctacgtcgacatcgtgctga 589
|| ||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 544 gcaacggcaacgccgccttcttcggtggcgactccattggctacgtcgacatcgtg---- 489
Query: 590 cgtgctcggctccttcttgttctggttcgaggcggtgcgcagggttttcgacctggagat 649
|||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 488 ----ctcggctccttcttgttctggttcgaggcggtgcgcagggttgacggcctggagat 433
Query: 650 cattaacgctagcaagactccgctgttggctgcgtgggcggagcggtttgtagggactgt 709
|||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||
Sbjct: 432 cattgacgcgagcaagactccgctcttggctgcgtgggcggagcggtttggagggagtgt 373
Query: 710 agaagcgaaggaggtggtgccgttgcccacggcggacatggcggtacagtacatcaataa 769
|||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||
Sbjct: 372 agaagcgaaggaggtggtgccggtgcctgaggcggacttggcggtacagtacatcaataa 313
Query: 770 gcttcatgcccc 781
| ||| ||||||
Sbjct: 312 gtttcgtgcccc 301
Score = 42.1 bits (21), Expect = 0.098
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 934 cagtcgtctcctctgcaataaatat 958
||||||||| |||||||||||||||
Sbjct: 112 cagtcgtctgctctgcaataaatat 88
Score = 40.1 bits (20), Expect = 0.39
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 865 aattccaaccgaataatgtt 884
||||||||||||||||||||
Sbjct: 203 aattccaaccgaataatgtt 184
>gb|BM330354.1|BM330354 PIC1_50_H02.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 542
Score = 414 bits (209), Expect = e-114
Identities = 336/378 (88%), Gaps = 14/378 (3%)
Strand = Plus / Plus
Query: 410 acgacaagttgtttccagcgtggtacggcatggtgaaggcccaggcggaggaggagaggg 469
||||||||||||| || |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 1 acgacaagttgttcccggcgtggtacggcatggtgaaagctcaggcggaggaggagaggg 60
Query: 470 cggagaaggcgaaggagacgctcgccgccatcgagcacatggaagtgaccttcgccaagt 529
||||||||| |||||| ||||| ||||| |||||| | ||||||||| ||||||||||||
Sbjct: 61 cggagaaggtgaaggaaacgcttgccgcaatcgagaaaatggaagtggccttcgccaagt 120
Query: 530 gctccggc---ggcaacgcc---ttcttcggtggcgactccatcggctacgtcgacatcg 583
|||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 121 gctccggcaacggcaacgccgccttcttcggtggcgactccatgggctacgtcgacatcg 180
Query: 584 tgctgacgtgctcggctccttcttgttctggttcgaggcggtgcgcagggttttcgacct 643
|| |||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 181 tg--------ctcggctccttcttgttctggttcgaggcggtgcgcagggttgacggcct 232
Query: 644 ggagatcattaacgctagcaagactccgctgttggctgcgtgggcggagcggtttgtagg 703
|||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||| |||
Sbjct: 233 ggagatcattgacgcgagcaagtctccgctcttggctgcgtgggcggagcggtttggagg 292
Query: 704 gactgtagaagcgaaggaggtggtgccgttgcccacggcggacatggcggtacagtacat 763
|| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 293 gagtgtagaagcgaaggaggtggtgccggtgcctgaggcggacttggcggtacagtacat 352
Query: 764 caataagcttcatgcccc 781
||||||| ||| ||||||
Sbjct: 353 caataagtttcgtgcccc 370
>gb|CW290372.1|CW290372 104_769_11412975_148_35557_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412975, DNA
sequence
Length = 615
Score = 396 bits (200), Expect = e-108
Identities = 315/353 (89%), Gaps = 14/353 (3%)
Strand = Plus / Minus
Query: 435 cggcatggtgaaggcccaggcggaggaggagagggcggagaaggcgaaggagacgctcgc 494
|||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||
Sbjct: 615 cggcatggtgaaagcccaggcggaggaggagagggcggagaaggtgaaggaaacgcttgc 556
Query: 495 cgccatcgagcacatggaagtgaccttcgccaagtgctccggc---ggcaacgcc---tt 548
||| |||||| | ||||||||| |||||||||||||||||||| ||||||||| ||
Sbjct: 555 cgcaatcgagaaaatggaagtggccttcgccaagtgctccggcaacggcaacgccgcctt 496
Query: 549 cttcggtggcgactccatcggctacgtcgacatcgtgctgacgtgctcggctccttcttg 608
|||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 495 cttcggtggcgactccattggctacgtcgacatcgtg--------ctcggctccttcttg 444
Query: 609 ttctggttcgaggcggtgcgcagggttttcgacctggagatcattaacgctagcaagact 668
||||||||||||||||||||||||||| || ||||||||||||| |||| |||||||||
Sbjct: 443 ttctggttcgaggcggtgcgcagggttgacggcctggagatcattgacgcgagcaagact 384
Query: 669 ccgctgttggctgcgtgggcggagcggtttgtagggactgtagaagcgaaggaggtggtg 728
||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 383 ccgctcttggctgcgtgggcggagcggtttggagggagtgtagaagcgaaggaggtggtg 324
Query: 729 ccgttgcccacggcggacatggcggtacagtacatcaataagcttcatgcccc 781
||| |||| ||||||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 323 ccggtgcctgaggcggacttggcggtacagtacatcaataagtttcgtgcccc 271
Score = 42.1 bits (21), Expect = 0.098
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 934 cagtcgtctcctctgcaataaatat 958
||||||||| |||||||||||||||
Sbjct: 82 cagtcgtctgctctgcaataaatat 58
Score = 40.1 bits (20), Expect = 0.39
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 865 aattccaaccgaataatgtt 884
||||||||||||||||||||
Sbjct: 173 aattccaaccgaataatgtt 154
>gb|CF072870.1|CF072870 FE1_26_A12.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_26_A12_A002 3', mRNA sequence
Length = 621
Score = 323 bits (163), Expect = 2e-086
Identities = 272/308 (88%), Gaps = 14/308 (4%)
Strand = Plus / Plus
Query: 480 gaaggagacgctcgccgccatcgagcacatggaagtgaccttcgccaagtgctccggc-- 537
|||||| ||||| ||||| |||||| | ||||||||| ||||||||||||||||||||
Sbjct: 94 gaaggaaacgcttgccgcaatcgagaaaatggaagtggccttcgccaagtgctccggcaa 153
Query: 538 -ggcaacgcc---ttcttcggtggcgactccatcggctacgtcgacatcgtgctgacgtg 593
||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 154 cggcaacgccgccttcttcggtggcgactccattggctacgtcgacatcgtg-------- 205
Query: 594 ctcggctccttcttgttctggttcgaggcggtgcgcagggttttcgacctggagatcatt 653
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 206 ctcggctccttcttgttctggttcgaggcggtgcgcagggttgacggcctggagatcatt 265
Query: 654 aacgctagcaagactccgctgttggctgcgtgggcggagcggtttgtagggactgtagaa 713
|||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||
Sbjct: 266 gacgcgagcaagactccgctcttggctgcgtgggcggagcggtttggagggagtgtagaa 325
Query: 714 gcgaaggaggtggtgccgttgcccacggcggacatggcggtacagtacatcaataagctt 773
|||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 326 gcgaaggaggtggtgccggtgcctgaggcggacttggcggtacagtacatcaataagttt 385
Query: 774 catgcccc 781
| ||||||
Sbjct: 386 cgtgcccc 393
Score = 42.1 bits (21), Expect = 0.098
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 934 cagtcgtctcctctgcaataaatat 958
||||||||| |||||||||||||||
Sbjct: 582 cagtcgtctgctctgcaataaatat 606
Score = 40.1 bits (20), Expect = 0.39
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 865 aattccaaccgaataatgtt 884
||||||||||||||||||||
Sbjct: 491 aattccaaccgaataatgtt 510
>gb|CW183587.1|CW183587 104_599_11164694_148_36677_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164694, DNA
sequence
Length = 688
Score = 159 bits (80), Expect = 6e-037
Identities = 170/200 (85%)
Strand = Plus / Plus
Query: 130 ggcctgcaggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtg 189
|||||||| |||||||| |||| ||| |||||| || |||||||| || |||| || ||
Sbjct: 132 ggcctgcacgtgagccctttcgcgcttcgcgtgcgcatggcgctggacctgaagggcctg 191
Query: 190 agttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaac 249
|| ||||||||||||||| ||||| | | | ||||||| || ||||| |||| ||||||
Sbjct: 192 agctacgagtacgtcgagcaggacctgttccacaagagcgacctcctcctcacctccaac 251
Query: 250 ccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactc 309
|| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 252 cccgtgcacaagaaggtccccgtgctcatccacaacggcaagcccatctgcgagtctctc 311
Query: 310 gtcatcatgcagtacgtcga 329
||| || || ||||| ||||
Sbjct: 312 gtcgtcctggagtacctcga 331
Score = 61.9 bits (31), Expect = 1e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 455 cggaggaggagagggcggagaaggcgaaggagacgctcgccgc 497
||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct: 478 cggaggaggagagagcggagaaggtgaaggagacgcacgccgc 520
>gb|CB925482.1|CB925482 ABA1_33_G05.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_33_G05_A012 5', mRNA sequence
Length = 410
Score = 159 bits (80), Expect = 6e-037
Identities = 170/200 (85%)
Strand = Plus / Plus
Query: 130 ggcctgcaggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtg 189
|||||||| |||||||| |||| ||| |||||| || |||||||| || |||| || ||
Sbjct: 114 ggcctgcacgtgagccctttcgcgcttcgcgtgcgcatggcgctggacctgaagggcctg 173
Query: 190 agttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaac 249
|| ||||||||||||||| ||||| | | | ||||||| || ||||| |||| ||||||
Sbjct: 174 agctacgagtacgtcgagcaggacctgttccacaagagcgacctcctcctcacctccaac 233
Query: 250 ccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactc 309
|| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 234 cccgtgcacaagaaggtccccgtgctcatccacaacggcaagcccatctgcgagtctctc 293
Query: 310 gtcatcatgcagtacgtcga 329
||| || || ||||| ||||
Sbjct: 294 gtcgtcctggagtacctcga 313
>gb|CD432214.1|CD432214 ETH1_26_E09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_E09_A002 5', mRNA sequence
Length = 689
Score = 159 bits (80), Expect = 6e-037
Identities = 170/200 (85%)
Strand = Plus / Plus
Query: 130 ggcctgcaggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtg 189
|||||||| |||||||| |||| ||| |||||| || |||||||| || |||| || ||
Sbjct: 114 ggcctgcacgtgagccctttcgcgcttcgcgtgcgcatggcgctggacctgaagggcctg 173
Query: 190 agttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaac 249
|| ||||||||||||||| ||||| | | | ||||||| || ||||| |||| ||||||
Sbjct: 174 agctacgagtacgtcgagcaggacctgttccacaagagcgacctcctcctcacctccaac 233
Query: 250 ccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactc 309
|| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 234 cccgtgcacaagaaggtccccgtgctcatccacaacggcaagcccatctgcgagtctctc 293
Query: 310 gtcatcatgcagtacgtcga 329
||| || || ||||| ||||
Sbjct: 294 gtcgtcctggagtacctcga 313
Score = 61.9 bits (31), Expect = 1e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 455 cggaggaggagagggcggagaaggcgaaggagacgctcgccgc 497
||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct: 460 cggaggaggagagagcggagaaggtgaaggagacgcacgccgc 502
>gb|CN129146.1|CN129146 RHOH1_33_F09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_F09_A002 5', mRNA sequence
Length = 753
Score = 159 bits (80), Expect = 6e-037
Identities = 170/200 (85%)
Strand = Plus / Plus
Query: 130 ggcctgcaggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtg 189
|||||||| |||||||| |||| ||| |||||| || |||||||| || |||| || ||
Sbjct: 108 ggcctgcacgtgagccctttcgcgcttcgcgtgcgcatggcgctggacctgaagggcctg 167
Query: 190 agttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaac 249
|| ||||||||||||||| ||||| | | | ||||||| || ||||| |||| ||||||
Sbjct: 168 agctacgagtacgtcgagcaggacctgttccacaagagcgacctcctcctcacctccaac 227
Query: 250 ccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactc 309
|| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 228 cccgtgcacaagaaggtccccgtgctcatccacaacggcaagcccatctgcgagtctctc 287
Query: 310 gtcatcatgcagtacgtcga 329
||| || || ||||| ||||
Sbjct: 288 gtcgtcctggagtacctcga 307
Score = 61.9 bits (31), Expect = 1e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 455 cggaggaggagagggcggagaaggcgaaggagacgctcgccgc 497
||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct: 454 cggaggaggagagagcggagaaggtgaaggagacgcacgccgc 496
>gb|CX622011.1|CX622011 GABR1_61_B06.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_B06_A002 5', mRNA sequence
Length = 760
Score = 159 bits (80), Expect = 6e-037
Identities = 170/200 (85%)
Strand = Plus / Plus
Query: 130 ggcctgcaggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtg 189
|||||||| |||||||| |||| ||| |||||| || |||||||| || |||| || ||
Sbjct: 88 ggcctgcacgtgagccctttcgcgcttcgcgtgcgcatggcgctggacctgaagggcctg 147
Query: 190 agttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaac 249
|| ||||||||||||||| ||||| | | | ||||||| || ||||| |||| ||||||
Sbjct: 148 agctacgagtacgtcgagcaggacctgttccacaagagcgacctcctcctcacctccaac 207
Query: 250 ccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactc 309
|| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 208 cccgtgcacaagaaggtccccgtgctcatccacaacggcaagcccatctgcgagtctctc 267
Query: 310 gtcatcatgcagtacgtcga 329
||| || || ||||| ||||
Sbjct: 268 gtcgtcctggagtacctcga 287
Score = 61.9 bits (31), Expect = 1e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 455 cggaggaggagagggcggagaaggcgaaggagacgctcgccgc 497
||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct: 434 cggaggaggagagagcggagaaggtgaaggagacgcacgccgc 476
>gb|CW226157.1|CW226157 104_664_11204738_148_37217_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204738, DNA
sequence
Length = 647
Score = 151 bits (76), Expect = 1e-034
Identities = 192/231 (83%), Gaps = 6/231 (2%)
Strand = Plus / Minus
Query: 193 tacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccg 252
||||||||||||||||| ||| | ||||||||| |||||||| ||| |||||||||||
Sbjct: 330 tacgagtacgtcgaggaagacctcctcaacaagagcgagctccttctccagtccaacccg 271
Query: 253 gtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtc 312
|||||||||||||||||||||||||||||| |||| ||||| ||| |||||| | |||
Sbjct: 270 gtgcacaagaaggtgcccgtgctcatccacgacggcaagccgatcgccgagtcgcaggtc 211
Query: 313 atcatgcagtacgtcgacgagctgttcgcc------ggccggccgatcctcccaaccgac 366
||| | |||||| |||||||| | |||||| |||| | || ||||||| |||||
Sbjct: 210 atcgtccagtacctcgacgaggtcttcgccggcacgggcccgtcggtcctccccgccgac 151
Query: 367 ccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
||||||| |||||||| || ||||||||||| |||| || ||||||||||
Sbjct: 150 ccctacggccgcgccaccgcccgcttctgggccgccttcgtcgacgacaag 100
>gb|CW298152.1|CW298152 104_780_11462428_116_35649_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462428, DNA
sequence
Length = 609
Score = 151 bits (76), Expect = 1e-034
Identities = 192/231 (83%), Gaps = 6/231 (2%)
Strand = Plus / Plus
Query: 193 tacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccg 252
||||||||||||||||| ||| | ||||||||| |||||||| ||| |||||||||||
Sbjct: 101 tacgagtacgtcgaggaagacctcctcaacaagagcgagctccttctccagtccaacccg 160
Query: 253 gtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtc 312
|||||||||||||||||||||||||||||| |||| ||||| ||| |||||| | |||
Sbjct: 161 gtgcacaagaaggtgcccgtgctcatccacgacggcaagccgatcgccgagtcgcaggtc 220
Query: 313 atcatgcagtacgtcgacgagctgttcgcc------ggccggccgatcctcccaaccgac 366
||| | |||||| |||||||| | |||||| |||| | || ||||||| |||||
Sbjct: 221 atcgtccagtacctcgacgaggtcttcgccggcacgggcccgtcggtcctccccgccgac 280
Query: 367 ccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
||||||| |||||||| || ||||||||||| |||| || ||||||||||
Sbjct: 281 ccctacggccgcgccaccgcccgcttctgggccgccttcgtcgacgacaag 331
>gb|CN140982.1|CN140982 OX1_48_C12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_48_C12_A002 5', mRNA sequence
Length = 511
Score = 151 bits (76), Expect = 1e-034
Identities = 169/200 (84%)
Strand = Plus / Plus
Query: 130 ggcctgcaggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtg 189
|||||||| |||||||| |||| || |||||| || |||||||| || |||| || ||
Sbjct: 84 ggcctgcacgtgagccctttcgcgcctcgcgtgcgcatggcgctggacctgaagggcctg 143
Query: 190 agttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaac 249
|| ||||||||||||||| ||||| | | | ||||||| || ||||| |||| ||||||
Sbjct: 144 agctacgagtacgtcgagcaggacctgttccacaagagcgacctcctcctcacctccaac 203
Query: 250 ccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactc 309
|| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 204 cccgtgcacaagaaggtccccgtgctcatccacaacggcaagcccatctgcgagtctctc 263
Query: 310 gtcatcatgcagtacgtcga 329
||| || || ||||| ||||
Sbjct: 264 gtcgtcctggagtacctcga 283
Score = 61.9 bits (31), Expect = 1e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 455 cggaggaggagagggcggagaaggcgaaggagacgctcgccgc 497
||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct: 430 cggaggaggagagagcggagaaggtgaaggagacgcacgccgc 472
>gb|CN147630.1|CN147630 WOUND1_50_H12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_H12_A002 5', mRNA sequence
Length = 510
Score = 151 bits (76), Expect = 1e-034
Identities = 169/200 (84%)
Strand = Plus / Plus
Query: 130 ggcctgcaggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtg 189
|||||||| |||||||| |||| ||| |||||| || |||||||| || |||| || ||
Sbjct: 103 ggcctgcacgtgagccctttcgcgcttcgcgtgcgcatggcgctggacctgaagggcctg 162
Query: 190 agttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaac 249
|| ||||||||||||||| ||||| | | | ||||||| || ||||| |||| ||||||
Sbjct: 163 agctacgagtacgtcgagcaggacctgttccacaagagcgacctcctcctcacctccaac 222
Query: 250 ccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactc 309
|| |||||||||||||| |||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 223 cccgtgcacaagaaggtccccgtgctcatccacaacggcaagcccatctgcgaggctctc 282
Query: 310 gtcatcatgcagtacgtcga 329
||| || || ||||| ||||
Sbjct: 283 gtcgtcctggagtacctcga 302
Score = 61.9 bits (31), Expect = 1e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 455 cggaggaggagagggcggagaaggcgaaggagacgctcgccgc 497
||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct: 449 cggaggaggagagagcggagaaggtgaaggagacgcacgccgc 491
>gb|CW095836.1|CW095836 104_461_11001557_148_34328_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11001557, DNA
sequence
Length = 583
Score = 143 bits (72), Expect = 4e-032
Identities = 191/231 (82%), Gaps = 6/231 (2%)
Strand = Plus / Minus
Query: 193 tacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccg 252
||||||||||||||||| ||| | ||||||||| |||||||| ||| |||||||||||
Sbjct: 507 tacgagtacgtcgaggaagacctcctcaacaagagcgagctccttctccagtccaacccg 448
Query: 253 gtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtc 312
|||||||||||||||||||||||||||||| |||| ||||| ||| |||||| | |||
Sbjct: 447 gtgcacaagaaggtgcccgtgctcatccacgacggcaagccgatcgccgagtcgcaggtc 388
Query: 313 atcatgcagtacgtcgacgagctgttcgcc------ggccggccgatcctcccaaccgac 366
||| | |||||| |||||||| | |||||| |||| | || ||||||| |||||
Sbjct: 387 atcgtccagtacctcgacgaggtcttcgccggcacgggcccgtcggtcctccccgccgac 328
Query: 367 ccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
||||||| |||||||| || ||||| ||||| |||| || ||||||||||
Sbjct: 327 ccctacggccgcgccaccgcccgcttatgggccgccttcgtcgacgacaag 277
>gb|BF421185.1|BF421185 FM1_6_E04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 440
Score = 143 bits (72), Expect = 4e-032
Identities = 191/231 (82%), Gaps = 6/231 (2%)
Strand = Plus / Plus
Query: 193 tacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccg 252
||||||||||||||||| ||| | ||||||||| |||||||| |||||||||||||||
Sbjct: 89 tacgagtacgtcgaggaagacctcctcaacaagagcgagctccttctcaagtccaacccg 148
Query: 253 gtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtc 312
|||||||||||||||||||||||||||||| |||| ||||| ||| |||||| |||
Sbjct: 149 gtgcacaagaaggtgcccgtgctcatccacgacggcaagccgatcgccgagtcggaagtc 208
Query: 313 atcatgcagtacgtcgacgagctgttcgcc------ggccggccgatcctcccaaccgac 366
||| | |||||| |||| ||| | |||||| |||| | || ||||||| |||||
Sbjct: 209 atcgtccagtacctcgatgaggtcttcgccggcacgggcccgtcggtcctccccgccgac 268
Query: 367 ccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
||||||| |||||||| || ||||||||||| |||| || ||||||||||
Sbjct: 269 ccctacggccgcgccaccgcccgcttctgggccgccttcgtcgacgacaag 319
>gb|BF421398.1|BF421398 FM1_8_D04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 508
Score = 143 bits (72), Expect = 4e-032
Identities = 191/231 (82%), Gaps = 6/231 (2%)
Strand = Plus / Plus
Query: 193 tacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccg 252
||||||||||||||||| ||| | ||||||||| |||||||| |||||||||||||||
Sbjct: 89 tacgagtacgtcgaggaagacctcctcaacaagagcgagctccttctcaagtccaacccg 148
Query: 253 gtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtc 312
|||||||||||||||||||||||||||||| |||| ||||| ||| |||||| |||
Sbjct: 149 gtgcacaagaaggtgcccgtgctcatccacgacggcaagccgatcgccgagtcggaagtc 208
Query: 313 atcatgcagtacgtcgacgagctgttcgcc------ggccggccgatcctcccaaccgac 366
||| | |||||| |||| ||| | |||||| |||| | || ||||||| |||||
Sbjct: 209 atcgtccagtacctcgatgaggtcttcgccggcacgggcccgtcggtcctccccgccgac 268
Query: 367 ccctacgagcgcgccactgctcgcttctgggctgcctacgccgacgacaag 417
||||||| |||||||| || ||||||||||| |||| || ||||||||||
Sbjct: 269 ccctacggccgcgccaccgcccgcttctgggccgccttcgtcgacgacaag 319
>gb|CW366630.1|CW366630 fsbb001f039l10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f039l10, DNA
sequence
Length = 679
Score = 127 bits (64), Expect = 2e-027
Identities = 121/140 (86%)
Strand = Plus / Minus
Query: 193 tacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccg 252
||||||||||||||||| ||| | ||||||||| |||||||| ||| |||||||||||
Sbjct: 155 tacgagtacgtcgaggaagacctcctcaacaagagcgagctccttctccagtccaacccg 96
Query: 253 gtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtc 312
|||||||||||||||||||||||||||||| |||| ||||| ||| |||||| | |||
Sbjct: 95 gtgcacaagaaggtgcccgtgctcatccacgacggcaagccgatcgccgagtcgcaggtc 36
Query: 313 atcatgcagtacgtcgacga 332
||| | |||||| |||||||
Sbjct: 35 atcgtccagtacctcgacga 16
>gb|CW161660.1|CW161660 104_568_11150530_148_36435_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150530, DNA
sequence
Length = 707
Score = 123 bits (62), Expect = 3e-026
Identities = 101/114 (88%)
Strand = Plus / Minus
Query: 220 aacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatc 279
|||||||| |||||||| |||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 304 aacaagagcgagctcctcctcaagtccaaccccgtgcacaaaaaggtacccgtgctcatc 245
Query: 280 cacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
|||||||| |||||| |||||||||| | |||||| |||| ||| ||||||||
Sbjct: 244 cacaacgggaagcccgtctgcgagtcgcgggtcatcctgcaatacatcgacgag 191
Score = 50.1 bits (25), Expect = 4e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctac 405
||||||| ||||||||||| | |||||| ||||||||||||||| ||||||
Sbjct: 165 tcctccctgccgacccctaccaacgcgccgttgctcgcttctgggccgcctac 113
>gb|BE355015.1|BE355015 DG1_10_E05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 452
Score = 123 bits (62), Expect = 3e-026
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 220 aacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatc 279
|||||||| |||||||| |||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 166 aacaagagcgagctcctcctcaagtccaaccccgtgcacaaaaaggtacccgtgctcatc 225
Query: 280 cacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
|||||||| |||||| |||||||||| | |||||| |||| ||| ||||||||
Sbjct: 226 cacaacgggaagcccgtctgcgagtcgcgggtcatcctgcaatacatcgacgag 279
Score = 50.1 bits (25), Expect = 4e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctac 405
||||||| ||||||||||| | |||||| ||||||||||||||| ||||||
Sbjct: 305 tcctccctgccgacccctaccaacgcgccgttgctcgcttctgggccgcctac 357
>gb|BE355164.1|BE355164 DG1_10_E05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 123 bits (62), Expect = 3e-026
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 220 aacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatc 279
|||||||| |||||||| |||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 36 aacaagagcgagctcctcctcaagtccaaccccgtgcacaaaaaggtacccgtgctcatc 95
Query: 280 cacaacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgag 333
|||||||| |||||| |||||||||| | |||||| |||| ||| ||||||||
Sbjct: 96 cacaacgggaagcccgtctgcgagtcgcgggtcatcctgcaatacatcgacgag 149
Score = 50.1 bits (25), Expect = 4e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctac 405
||||||| ||||||||||| | |||||| ||||||||||||||| ||||||
Sbjct: 175 tcctccctgccgacccctaccaacgcgccgttgctcgcttctgggccgcctac 227
>gb|CW259602.1|CW259602 104_726_11228516_116_35191_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228516, DNA
sequence
Length = 629
Score = 117 bits (59), Expect = 2e-024
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 239 tcaagtccaacccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatct 298
|||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 51 tcaagtccaatccggtgcacaagaaggtacccgtcctcatccacaacggcaagcccatct 110
Query: 299 gcgagtcactcgtcatcatgcagtacgtcga 329
||||||||| |||||| |||||||| ||||
Sbjct: 111 gcgagtcacaggtcatcgtgcagtacatcga 141
>gb|BE355802.1|BE355802 DG1_11_E04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 525
Score = 109 bits (55), Expect = 5e-022
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 219 caacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcat 278
||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 436 caacaagagcgagctccttctccagtccaacccggtgcacaagaaggtgcccgtgctcat 495
Query: 279 ccacaacggtaagcc 293
|||| |||| |||||
Sbjct: 496 ccacgacggcaagcc 510
>gb|CN141311.1|CN141311 OX1_50_E02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_50_E02_A002 5', mRNA sequence
Length = 490
Score = 105 bits (53), Expect = 8e-021
Identities = 119/141 (84%)
Strand = Plus / Plus
Query: 193 tacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaacccg 252
||||||||||||||||||||| | | | |||||| || ||||||||| ||||||||||
Sbjct: 152 tacgagtacgtcgaggaggacctcttcggcaagagcgacctcctgctccggtccaacccg 211
Query: 253 gtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcactcgtc 312
||||||||||||||||| || ||||||||| ||| || | |||||||| ||||||
Sbjct: 212 gtgcacaagaaggtgccggtcctcatccacggcggccgcccggtgtgcgagtcgctcgtc 271
Query: 313 atcatgcagtacgtcgacgag 333
||| |||||||||||||||||
Sbjct: 272 atcgtgcagtacgtcgacgag 292
Score = 60.0 bits (30), Expect = 4e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacg 412
||||||| ||||| || |||| |||||||| |||||||||||||| |||||| |||||
Sbjct: 327 tcctccccgccgacgcccacgaccgcgccacggctcgcttctgggcagcctacatcgacg 386
Query: 413 acaagt 418
||||||
Sbjct: 387 acaagt 392
>gb|CN142345.1|CN142345 WOUND1_9_A01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_9_A01_A002 5', mRNA sequence
Length = 269
Score = 105 bits (53), Expect = 8e-021
Identities = 128/153 (83%)
Strand = Plus / Plus
Query: 130 ggcctgcaggtgagcccgttcgtgctccgcgtgtgcttggcgctgaacatgaaaggagtg 189
|||||||| |||||||| |||| ||| |||||| || |||||||| || |||| || ||
Sbjct: 117 ggcctgcacgtgagccctttcgcgcttcgcgtgcgcatggcgctggacctgaagggcctg 176
Query: 190 agttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtccaac 249
|| |||||| |||||||| ||||| | | | ||||||| || ||||| |||| ||||||
Sbjct: 177 agctacgagaacgtcgagcaggacctgttccacaagagcgacctcctcctcacctccaac 236
Query: 250 ccggtgcacaagaaggtgcccgtgctcatccac 282
|| |||||||||||||| |||||||||||||||
Sbjct: 237 cccgtgcacaagaaggtccccgtgctcatccac 269
>gb|CW137912.1|CW137912 104_525_11119926_116_34877_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11119926, DNA
sequence
Length = 607
Score = 103 bits (52), Expect = 3e-020
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 222 caagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatcca 281
|||||| ||||| || ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 425 caagagcgagctgctcctcaagtccaacccggtgcacaagaaggtgcccgtgctcctccg 366
Query: 282 caacggtaagcc 293
||||||||||||
Sbjct: 365 caacggtaagcc 354
Score = 81.8 bits (41), Expect = 1e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacg 412
|||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||||
Sbjct: 288 tcctcccaaccgacccttaccagcgcgccatggctcgcttctggggtgcctacgtcgacg 229
Query: 413 acaag 417
|||||
Sbjct: 228 acaag 224
>gb|CW137913.1|CW137913 104_525_11119926_148_34873_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11119926, DNA
sequence
Length = 644
Score = 103 bits (52), Expect = 3e-020
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 222 caagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatcca 281
|||||| ||||| || ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 218 caagagcgagctgctcctcaagtccaacccggtgcacaagaaggtgcccgtgctcctccg 277
Query: 282 caacggtaagcc 293
||||||||||||
Sbjct: 278 caacggtaagcc 289
Score = 81.8 bits (41), Expect = 1e-013
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 353 tcctcccaaccgacccctacgagcgcgccactgctcgcttctgggctgcctacgccgacg 412
|||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||||
Sbjct: 355 tcctcccaaccgacccttaccagcgcgccatggctcgcttctggggtgcctacgtcgacg 414
Query: 413 acaag 417
|||||
Sbjct: 415 acaag 419
>gb|CW434448.1|CW434448 fsbb001f150c10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f150c10, DNA
sequence
Length = 769
Score = 103 bits (52), Expect = 3e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 220 aacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatc 279
|||||||| |||| || ||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 415 aacaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatc 474
Query: 280 cacaacggtaagcccatctgcgag 303
|||||||| |||||| ||||||||
Sbjct: 475 cacaacggcaagcccgtctgcgag 498
>gb|CW434882.1|CW434882 fsbb001f150m16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f150m16, DNA
sequence
Length = 740
Score = 103 bits (52), Expect = 3e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 220 aacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatc 279
|||||||| |||| || ||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 415 aacaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatc 474
Query: 280 cacaacggtaagcccatctgcgag 303
|||||||| |||||| ||||||||
Sbjct: 475 cacaacggcaagcccgtctgcgag 498
>gb|CW490180.1|CW490180 fsbb001f275h22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f275h22, DNA
sequence
Length = 659
Score = 103 bits (52), Expect = 3e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 220 aacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatc 279
|||||||| |||| || ||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 49 aacaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatc 108
Query: 280 cacaacggtaagcccatctgcgag 303
|||||||| |||||| ||||||||
Sbjct: 109 cacaacggcaagcccgtctgcgag 132
>gb|BM323141.1|BM323141 PIC1_8_B08.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 486
Score = 103 bits (52), Expect = 3e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 220 aacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatc 279
|||||||| |||| || ||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 253 aacaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatc 312
Query: 280 cacaacggtaagcccatctgcgag 303
|||||||| |||||| ||||||||
Sbjct: 313 cacaacggcaagcccgtctgcgag 336
>gb|BM324939.1|BM324939 PIC1_37_G06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 455
Score = 103 bits (52), Expect = 3e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 220 aacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatc 279
|||||||| |||| || ||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 216 aacaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatc 275
Query: 280 cacaacggtaagcccatctgcgag 303
|||||||| |||||| ||||||||
Sbjct: 276 cacaacggcaagcccgtctgcgag 299
>gb|CD432560.1|CD432560 ETH1_30_D08.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_D08_A002 5', mRNA sequence
Length = 730
Score = 103 bits (52), Expect = 3e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 220 aacaagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatc 279
|||||||| |||| || ||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 aacaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatc 384
Query: 280 cacaacggtaagcccatctgcgag 303
|||||||| |||||| ||||||||
Sbjct: 385 cacaacggcaagcccgtctgcgag 408
>gb|CW139439.1|CW139439 104_529_11135238_148_34909_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135238, DNA
sequence
Length = 423
Score = 99.6 bits (50), Expect = 5e-019
Identities = 119/142 (83%)
Strand = Plus / Minus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| ||||||||||||||||||||| | |||||||| ||||||| ||| |||||
Sbjct: 328 tgagctacgagtacgtcgaggaggacgtcaagaacaagagccagctcctcctcgcgtcca 269
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcac 307
| || || ||||||||||||||||||||||||||| |||| |||||| ||||||| ||||
Sbjct: 268 atcccgttcacaagaaggtgcccgtgctcatccacgacgggaagcccgtctgcgaatcac 209
Query: 308 tcgtcatcatgcagtacgtcga 329
|||||| |||| ||| ||||
Sbjct: 208 aggtcatcgtgcactacatcga 187
Score = 50.1 bits (25), Expect = 4e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 362 ccgacccctacgagcgcgccactgctcgcttctgggc 398
|||||||||||||||| ||||| || |||||||||||
Sbjct: 139 ccgacccctacgagcgtgccaccgcccgcttctgggc 103
>gb|CW215449.1|CW215449 104_647_11194545_116_37165_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194545, DNA
sequence
Length = 691
Score = 99.6 bits (50), Expect = 5e-019
Identities = 119/142 (83%)
Strand = Plus / Minus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| ||||||||||||||||||||| | |||||||| ||||||| ||| |||||
Sbjct: 673 tgagctacgagtacgtcgaggaggacgtcaagaacaagagccagctcctcctcgcgtcca 614
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcac 307
| || || ||||||||||||||||||||||||||| |||| |||||| ||||||| ||||
Sbjct: 613 atcccgttcacaagaaggtgcccgtgctcatccacgacgggaagcccgtctgcgaatcac 554
Query: 308 tcgtcatcatgcagtacgtcga 329
|||||| |||| ||| ||||
Sbjct: 553 aggtcatcgtgcactacatcga 532
Score = 50.1 bits (25), Expect = 4e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 362 ccgacccctacgagcgcgccactgctcgcttctgggc 398
|||||||||||||||| ||||| || |||||||||||
Sbjct: 484 ccgacccctacgagcgtgccaccgcccgcttctgggc 448
>gb|CW248190.1|CW248190 104_709_11222168_116_35030_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222168, DNA
sequence
Length = 668
Score = 99.6 bits (50), Expect = 5e-019
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| ||||||||||||||||||||| | |||||||| ||||||| ||| |||||
Sbjct: 502 tgagctacgagtacgtcgaggaggacgtcaagaacaagagccagctcctcctcgcgtcca 561
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcac 307
| || || ||||||||||||||||||||||||||| |||| |||||| ||||||| ||||
Sbjct: 562 atcccgttcacaagaaggtgcccgtgctcatccacgacgggaagcccgtctgcgaatcac 621
Query: 308 tcgtcatcatgcagtacgtcga 329
|||||| |||| ||| ||||
Sbjct: 622 aggtcatcgtgcactacatcga 643
>gb|CW248191.1|CW248191 104_709_11222168_148_35026_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222168, DNA
sequence
Length = 618
Score = 99.6 bits (50), Expect = 5e-019
Identities = 119/142 (83%)
Strand = Plus / Minus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| ||||||||||||||||||||| | |||||||| ||||||| ||| |||||
Sbjct: 483 tgagctacgagtacgtcgaggaggacgtcaagaacaagagccagctcctcctcgcgtcca 424
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcac 307
| || || ||||||||||||||||||||||||||| |||| |||||| ||||||| ||||
Sbjct: 423 atcccgttcacaagaaggtgcccgtgctcatccacgacgggaagcccgtctgcgaatcac 364
Query: 308 tcgtcatcatgcagtacgtcga 329
|||||| |||| ||| ||||
Sbjct: 363 aggtcatcgtgcactacatcga 342
Score = 50.1 bits (25), Expect = 4e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 362 ccgacccctacgagcgcgccactgctcgcttctgggc 398
|||||||||||||||| ||||| || |||||||||||
Sbjct: 294 ccgacccctacgagcgtgccaccgcccgcttctgggc 258
>gb|BI643627.1|BI643627 DG1_92_B06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 99.6 bits (50), Expect = 5e-019
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| ||||||||||||||||||||| | |||||||| ||||||| ||| |||||
Sbjct: 206 tgagctacgagtacgtcgaggaggacgtcaagaacaagagccagctcctcctcgcgtcca 265
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcac 307
| || || ||||||||||||||||||||||||||| |||| |||||| ||||||| ||||
Sbjct: 266 atcccgttcacaagaaggtgcccgtgctcatccacgacgggaagcccgtctgcgaatcac 325
Query: 308 tcgtcatcatgcagtacgtcga 329
|||||| |||| ||| ||||
Sbjct: 326 aggtcatcgtgcactacatcga 347
Score = 50.1 bits (25), Expect = 4e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 362 ccgacccctacgagcgcgccactgctcgcttctgggc 398
|||||||||||||||| ||||| || |||||||||||
Sbjct: 395 ccgacccctacgagcgtgccaccgcccgcttctgggc 431
>gb|CN138744.1|CN138744 OX1_13_D12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_D12_A002 5', mRNA sequence
Length = 608
Score = 99.6 bits (50), Expect = 5e-019
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 188 tgagttacgagtacgtcgaggaggacatatccaacaagagtgagctcctgctcaagtcca 247
|||| ||||||||||||||||||||| | |||||||| ||||||| ||| |||||
Sbjct: 200 tgagctacgagtacgtcgaggaggacgtcaagaacaagagccagctcctcctcgcgtcca 259
Query: 248 acccggtgcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgcgagtcac 307
| || || ||||||||||||||||||||||||||| |||| |||||| ||||||| ||||
Sbjct: 260 atcccgttcacaagaaggtgcccgtgctcatccacgacgggaagcccgtctgcgaatcac 319
Query: 308 tcgtcatcatgcagtacgtcga 329
|||||| |||| ||| ||||
Sbjct: 320 aggtcatcgtgcactacatcga 341
Score = 50.1 bits (25), Expect = 4e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 362 ccgacccctacgagcgcgccactgctcgcttctgggc 398
|||||||||||||||| ||||| || |||||||||||
Sbjct: 389 ccgacccctacgagcgtgccaccgcccgcttctgggc 425
>gb|CL150040.1|CL150040 104_331_10778242_114_31355_178 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778242, DNA
sequence
Length = 725
Score = 97.6 bits (49), Expect = 2e-018
Identities = 157/190 (82%), Gaps = 6/190 (3%)
Strand = Plus / Plus
Query: 222 caagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatcca 281
|||||| ||||| || |||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 477 caagagcgagctgctcctcaagtccaaccctgtgcacaacaaggtacccgtgctcatcca 536
Query: 282 caacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgagctgttcgc 341
|||||| |||||| |||| || || || ||||| |||| ||| |||||||| || ||
Sbjct: 537 caacgggaagcccgtctgtgaatcgctgatcatcctgcaatacatcgacgaggcctttgc 596
Query: 342 cgg--ccgg-ccga---tcctcccaaccgacccctacgagcgcgccactgctcgcttctg 395
||| |||| |||| ||||||| | ||||||||||| |||||| ||||||||||||
Sbjct: 597 cggcaccggcccgaccctcctccctgctgacccctacgaacgcgccgttgctcgcttctg 656
Query: 396 ggctgcctac 405
||| ||||||
Sbjct: 657 ggccgcctac 666
>gb|CW268578.1|CW268578 104_739_11401384_116_35309_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401384, DNA
sequence
Length = 606
Score = 97.6 bits (49), Expect = 2e-018
Identities = 157/190 (82%), Gaps = 6/190 (3%)
Strand = Plus / Plus
Query: 222 caagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatcca 281
|||||| ||||| || |||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 369 caagagcgagctgctcctcaagtccaaccctgtgcacaacaaggtacccgtgctcatcca 428
Query: 282 caacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgagctgttcgc 341
|||||| |||||| |||| || || || ||||| |||| ||| |||||||| || ||
Sbjct: 429 caacgggaagcccgtctgtgaatcgctgatcatcctgcaatacatcgacgaggcctttgc 488
Query: 342 cgg--ccgg-ccga---tcctcccaaccgacccctacgagcgcgccactgctcgcttctg 395
||| |||| |||| ||||||| | ||||||||||| |||||| ||||||||||||
Sbjct: 489 cggcaccggcccgaccctcctccctgctgacccctacgaacgcgccgttgctcgcttctg 548
Query: 396 ggctgcctac 405
||| ||||||
Sbjct: 549 ggccgcctac 558
>gb|CW365896.1|CW365896 fsbb001f038k07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038k07, DNA
sequence
Length = 758
Score = 97.6 bits (49), Expect = 2e-018
Identities = 157/190 (82%), Gaps = 6/190 (3%)
Strand = Plus / Plus
Query: 222 caagagtgagctcctgctcaagtccaacccggtgcacaagaaggtgcccgtgctcatcca 281
|||||| ||||| || |||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 464 caagagcgagctgctcctcaagtccaaccctgtgcacaacaaggtacccgtgctcatcca 523
Query: 282 caacggtaagcccatctgcgagtcactcgtcatcatgcagtacgtcgacgagctgttcgc 341
|||||| |||||| |||| || || || ||||| |||| ||| |||||||| || ||
Sbjct: 524 caacgggaagcccgtctgtgaatcgctgatcatcctgcaatacatcgacgaggcctttgc 583
Query: 342 cgg--ccgg-ccga---tcctcccaaccgacccctacgagcgcgccactgctcgcttctg 395
||| |||| |||| ||||||| | ||||||||||| |||||| ||||||||||||
Sbjct: 584 cggcaccggcccgaccctcctccctgctgacccctacgaacgcgccgttgctcgcttctg 643
Query: 396 ggctgcctac 405
||| ||||||
Sbjct: 644 ggccgcctac 653
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 325,786
Number of Sequences: 832831
Number of extensions: 325786
Number of successful extensions: 99087
Number of sequences better than 0.5: 275
Number of HSP's better than 0.5 without gapping: 272
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 98306
Number of HSP's gapped (non-prelim): 741
length of query: 1013
length of database: 491,359,669
effective HSP length: 20
effective length of query: 993
effective length of database: 474,703,049
effective search space: 471380127657
effective search space used: 471380127657
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)