BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713013.2.1
(3807 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkal... 946 0.0
gb|BG465505.1|BG465505 RHIZ2_45_D07.b1_A003 Rhizome2 (RHIZ2... 841 0.0
gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle... 841 0.0
gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/c... 773 0.0
gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed see... 763 0.0
gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle... 751 0.0
gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient se... 743 0.0
gb|BG559985.1|BG559985 RHIZ2_68_A11.b1_A003 Rhizome2 (RHIZ2... 741 0.0
gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2... 729 0.0
gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) So... 722 0.0
gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle... 712 0.0
gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-tr... 654 0.0
gb|CN134244.1|CN134244 OX1_25_E01.b1_A002 Oxidatively-stres... 648 0.0
gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seed... 636 e-180
gb|BG273410.1|BG273410 OV2_25_D04.b1_A002 Ovary 2 (OV2) Sor... 622 e-176
gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle ... 609 e-172
gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2... 535 e-149
gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkal... 525 e-147
gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkal... 490 e-136
gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorgh... 484 e-134
gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum m... 484 e-134
gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorgh... 484 e-134
gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorgh... 474 e-131
gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorgh... 452 e-124
gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG... 448 e-123
gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkal... 434 e-119
gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-defic... 412 e-112
gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced ... 410 e-112
gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stresse... 404 e-110
gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient se... 402 e-110
gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) So... 396 e-108
gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed see... 389 e-105
gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle... 383 e-104
gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation... 375 e-101
gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (L... 375 e-101
gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle ... 359 1e-096
gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum met... 355 2e-095
gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation... 355 2e-095
gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/c... 345 2e-092
gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorgh... 319 1e-084
gb|BI074863.1|BI074863 IP1_16_A11.b1_A002 Immature pannicle... 307 4e-081
gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkal... 305 2e-080
gb|BE357401.1|BE357401 DG1_15_D04.b2_A002 Dark Grown 1 (DG1... 285 1e-074
gb|BI245956.1|BI245956 IP1_65_G03.b1_A002 Immature pannicle... 281 2e-073
gb|BI141114.1|BI141114 IP1_43_D01.b1_A002 Immature pannicle... 278 4e-072
gb|BG241798.1|BG241798 RHIZ2_50_D01.b1_A003 Rhizome2 (RHIZ2... 276 1e-071
gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorgh... 266 1e-068
gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-tre... 266 1e-068
gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-defic... 260 9e-067
gb|CW315969.1|CW315969 104_807_11472644_148_35845_076 Sorgh... 258 3e-066
gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/c... 258 3e-066
gb|BG465855.1|BG465855 RHIZ2_45_D07.g1_A003 Rhizome2 (RHIZ2... 244 5e-062
gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorgh... 242 2e-061
gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorgh... 242 2e-061
gb|CN129000.1|CN129000 RHOH1_32_H10.g1_A002 Acid- and alkal... 240 8e-061
gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorgh... 236 1e-059
gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2... 236 1e-059
gb|CD211954.1|CD211954 HS1_67_A05.g1_A012 Heat-shocked seed... 232 2e-058
gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficie... 224 5e-056
gb|CD423915.1|CD423915 SA1_2_G12.g1_A002 Salicylic acid-tre... 220 7e-055
gb|BI212040.1|BI212040 IP1_63_G04.g1_A002 Immature pannicle... 216 1e-053
gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle... 216 1e-053
gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Mer... 214 5e-053
gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient se... 214 5e-053
gb|CF430600.1|CF430600 NIT1_3_E06.b1_A002 Nitrogen-deficien... 214 5e-053
gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorgh... 204 4e-050
gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation... 204 4e-050
gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (L... 202 2e-049
gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle ... 202 2e-049
gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle... 202 2e-049
gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorgh... 196 1e-047
gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient se... 194 4e-047
gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorg... 188 3e-045
gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorg... 188 3e-045
gb|AW564329.1|AW564329 LG1_290_C06.b1_A002 Light Grown 1 (L... 186 1e-044
gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (L... 184 4e-044
gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG... 184 4e-044
gb|CL177245.1|CL177245 104_384_10893704_116_31916_152 Sorgh... 182 2e-043
gb|CW024405.1|CW024405 104_164_10434936_5_30003 Sorghum met... 182 2e-043
gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced ... 182 2e-043
gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Me... 170 6e-040
gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle... 170 6e-040
gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seed... 168 2e-039
gb|CD233283.1|CD233283 SS1_13_H10.b1_A012 Salt-stressed see... 168 2e-039
gb|BF587214.1|BF587214 FM1_33_F03.b2_A003 Floral-Induced Me... 165 4e-038
gb|BG947539.1|BG947539 IP1_5_G03.g1_A002 Immature pannicle ... 165 4e-038
gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle... 163 1e-037
gb|CW058702.1|CW058702 104_301_10518887_115_30164 Sorghum m... 161 6e-037
gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stres... 161 6e-037
gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots ... 161 6e-037
gb|BQ656197.1|BQ656197 pSHR0113.2 Sorghum halepense rhizome... 159 2e-036
gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficie... 157 9e-036
gb|CW031319.1|CW031319 104_259_10500738_114_30397 Sorghum m... 155 4e-035
gb|CW180607.1|CW180607 104_595_11163041_148_36643_075 Sorgh... 155 4e-035
gb|BI076320.1|BI076320 IP1_25_G03.g1_A002 Immature pannicle... 155 4e-035
gb|CD427212.1|CD427212 SA1_18_E03.b1_A002 Salicylic acid-tr... 155 4e-035
gb|CW430835.1|CW430835 fsbb001f144l18k0 Sorghum methylation... 149 2e-033
gb|BI075362.1|BI075362 IP1_19_F06.b1_A002 Immature pannicle... 147 9e-033
gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorgh... 145 3e-032
gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkal... 141 5e-031
gb|CW180606.1|CW180606 104_595_11163041_116_36639_075 Sorgh... 139 2e-030
gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots ... 135 3e-029
gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2)... 133 1e-028
gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (L... 131 5e-028
gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2... 131 5e-028
gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle... 131 5e-028
gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorg... 129 2e-027
gb|CW366545.1|CW366545 fsbb001f039j12k0 Sorghum methylation... 127 8e-027
gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorg... 127 8e-027
gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Me... 127 8e-027
gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG... 121 5e-025
gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle... 121 5e-025
gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle... 121 5e-025
gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/c... 121 5e-025
gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Me... 119 2e-024
gb|BG273290.1|BG273290 OV2_25_D04.g1_A002 Ovary 2 (OV2) Sor... 117 8e-024
gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Me... 115 3e-023
gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkal... 115 3e-023
gb|CW023463.1|CW023463 104_163_10432463_1_30001 Sorghum met... 111 5e-022
gb|CW296109.1|CW296109 104_777_11461315_116_35620_068 Sorgh... 111 5e-022
gb|BG052472.1|BG052472 RHIZ2_13_D07.b1_A003 Rhizome2 (RHIZ2... 109 2e-021
gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2... 107 8e-021
gb|CF433508.1|CF433508 NIT1_27_E11.g1_A002 Nitrogen-deficie... 107 8e-021
gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stress... 107 8e-021
gb|CW296110.1|CW296110 104_777_11461315_148_35624_068 Sorgh... 105 3e-020
gb|BE918278.1|BE918278 OV1_1_D06.g1_A002 Ovary 1 (OV1) Sorg... 105 3e-020
gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Me... 103 1e-019
gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sor... 103 1e-019
gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/c... 103 1e-019
gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots ... 103 1e-019
gb|BE918322.1|BE918322 OV1_2_A10.g1_A002 Ovary 1 (OV1) Sorg... 101 5e-019
gb|BG103164.1|BG103164 RHIZ2_18_H12.g1_A003 Rhizome2 (RHIZ2... 100 2e-018
gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient se... 100 2e-018
gb|CW496561.1|CW496561 fsbb001f288o02f0 Sorghum methylation... 98 7e-018
gb|BF655935.1|BF655935 FM1_42_G12.g1_A003 Floral-Induced Me... 98 7e-018
gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient see... 98 7e-018
gb|CW502291.1|CW502291 fsbb001f298i22k0 Sorghum methylation... 96 3e-017
gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sor... 96 3e-017
gb|CW304966.1|CW304966 104_790_11466066_148_37436_077 Sorgh... 94 1e-016
gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle ... 94 1e-016
gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorgh... 92 5e-016
gb|CW378707.1|CW378707 fsbb001f057j16f0 Sorghum methylation... 92 5e-016
gb|CW502290.1|CW502290 fsbb001f298i22f0 Sorghum methylation... 92 5e-016
gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (L... 92 5e-016
gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorg... 92 5e-016
gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorg... 92 5e-016
gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Me... 92 5e-016
gb|CD213148.1|CD213148 HS1_28_B08.g1_A012 Heat-shocked seed... 90 2e-015
gb|CN129665.1|CN129665 RHOH1_36_E05.g1_A002 Acid- and alkal... 90 2e-015
gb|BE126049.1|BE126049 DG1_65_G07.b1_A002 Dark Grown 1 (DG1... 88 7e-015
gb|CL172543.1|CL172543 104_375_10890237_148_31796_141 Sorgh... 86 3e-014
gb|BI099525.1|BI099525 IP1_43_D01.g1_A002 Immature pannicle... 86 3e-014
gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkal... 84 1e-013
gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation... 82 4e-013
gb|BG158738.1|BG158738 RHIZ2_44_F02.g1_A003 Rhizome2 (RHIZ2... 82 4e-013
gb|BI141001.1|BI141001 IP1_41_H09.b1_A002 Immature pannicle... 80 2e-012
gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots ... 78 7e-012
gb|AW564350.1|AW564350 LG1_290_D05.b1_A002 Light Grown 1 (L... 76 3e-011
gb|AW284365.1|AW284365 LG1_275_F04.g1_A002 Light Grown 1 (L... 74 1e-010
gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2)... 74 1e-010
gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-tr... 74 1e-010
gb|CW056421.1|CW056421 104_298_10517674_114_30156 Sorghum m... 72 4e-010
gb|CW071795.1|CW071795 104_324_10591777_116_30462 Sorghum m... 72 4e-010
gb|CW113232.1|CW113232 104_487_11105330_116_34554_007 Sorgh... 72 4e-010
gb|CW236986.1|CW236986 104_693_11215917_148_37517_093 Sorgh... 72 4e-010
gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation... 72 4e-010
gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation... 72 4e-010
gb|BE357266.1|BE357266 DG1_148_D12.b1_A002 Dark Grown 1 (DG... 72 4e-010
gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1... 72 4e-010
gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle ... 72 4e-010
gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficie... 72 4e-010
gb|CW344900.1|CW344900 104_847_11488203_116_36201_004 Sorgh... 70 2e-009
gb|BE125071.1|BE125071 DG1_15_D04.b1_A002 Dark Grown 1 (DG1... 70 2e-009
gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-defic... 70 2e-009
gb|CW496562.1|CW496562 fsbb001f288o02k0 Sorghum methylation... 68 7e-009
gb|BF586023.1|BF586023 FM1_33_F03.b1_A003 Floral-Induced Me... 68 7e-009
gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficie... 68 7e-009
gb|CW282760.1|CW282760 104_759_11408886_116_35478_031 Sorgh... 66 3e-008
gb|BF585752.1|BF585752 FM1_24_B07.b1_A003 Floral-Induced Me... 66 3e-008
gb|BF655807.1|BF655807 FM1_41_F02.g1_A003 Floral-Induced Me... 66 3e-008
gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2... 66 3e-008
gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassino... 66 3e-008
gb|BZ423529.1|BZ423529 id50c12.g1 WGS-SbicolorF (DH5a methy... 62 4e-007
gb|CW218309.1|CW218309 104_651_11196119_148_37457_082 Sorgh... 62 4e-007
gb|CW480836.1|CW480836 fsbb001f240b20f0 Sorghum methylation... 62 4e-007
gb|BE363036.1|BE363036 DG1_9_B09.b1_A002 Dark Grown 1 (DG1)... 62 4e-007
gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sor... 62 4e-007
gb|CF073359.1|CF073359 FE1_22_A05.g1_A002 Iron-deficient se... 62 4e-007
gb|CW039030.1|CW039030 104_271_10505258_114_30387 Sorghum m... 60 2e-006
gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|BG103825.1|BG103825 RHIZ2_37_C06.b1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infecte... 60 2e-006
gb|CL157591.1|CL157591 104_345_10783695_114_31477_255 Sorgh... 58 6e-006
gb|CL157592.1|CL157592 104_345_10783695_116_31478_255 Sorgh... 58 6e-006
gb|CL197184.1|CL197184 104_424_10943572_114_32383_016 Sorgh... 58 6e-006
gb|CW082277.1|CW082277 104_424_10943572_114_32334_016 Sorgh... 58 6e-006
gb|CW481819.1|CW481819 fsbb001f241j14k0 Sorghum methylation... 58 6e-006
gb|CW501227.1|CW501227 fsbb001f296p02k0 Sorghum methylation... 58 6e-006
gb|BF481629.1|BF481629 FM1_20_D08.g1_A003 Floral-Induced Me... 58 6e-006
gb|BF585894.1|BF585894 FM1_25_H01.g1_A003 Floral-Induced Me... 58 6e-006
gb|BF656010.1|BF656010 FM1_42_G12.b1_A003 Floral-Induced Me... 58 6e-006
gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2... 58 6e-006
gb|CF073760.1|CF073760 FE1_12_E05.b1_A002 Iron-deficient se... 58 6e-006
gb|BZ334230.1|BZ334230 hx77g06.b1 WGS-SbicolorF (JM107 adap... 56 2e-005
gb|BZ334231.1|BZ334231 hx77g06.g1 WGS-SbicolorF (JM107 adap... 56 2e-005
gb|BZ335207.1|BZ335207 hx96c01.b1 WGS-SbicolorF (JM107 adap... 56 2e-005
gb|BZ335208.1|BZ335208 hx96c01.g1 WGS-SbicolorF (JM107 adap... 56 2e-005
gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorgh... 56 2e-005
gb|BF585972.1|BF585972 FM1_25_H01.b1_A003 Floral-Induced Me... 56 2e-005
gb|BG103336.1|BG103336 RHIZ2_18_H12.b1_A003 Rhizome2 (RHIZ2... 56 2e-005
gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2... 56 2e-005
gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2... 56 2e-005
gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (L... 54 1e-004
gb|BF586500.1|BF586500 FM1_29_A05.g1_A003 Floral-Induced Me... 54 1e-004
gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Me... 54 1e-004
gb|BG050513.1|BG050513 FM1_70_D01.g1_A003 Floral-Induced Me... 54 1e-004
gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle ... 54 1e-004
gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle... 54 1e-004
gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle... 54 1e-004
gb|BI099373.1|BI099373 IP1_41_C08.g1_A002 Immature pannicle... 54 1e-004
gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle... 54 1e-004
gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle... 54 1e-004
gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle... 54 1e-004
gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle... 54 1e-004
gb|CD213045.1|CD213045 HS1_28_B08.b1_A012 Heat-shocked seed... 54 1e-004
gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/c... 54 1e-004
gb|CL190999.1|CL190999 104_409_10906474_116_32497_037 Sorgh... 52 4e-004
gb|CW208007.1|CW208007 104_637_11188450_148_37047_041 Sorgh... 52 4e-004
gb|CW213541.1|CW213541 104_645_11191609_116_37038_013 Sorgh... 52 4e-004
gb|CW295974.1|CW295974 104_777_11461240_116_35623_056 Sorgh... 52 4e-004
gb|CW295975.1|CW295975 104_777_11461240_148_35627_056 Sorgh... 52 4e-004
gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorgh... 52 4e-004
gb|CW411521.1|CW411521 fsbb001f106l17k0 Sorghum methylation... 52 4e-004
gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG... 52 4e-004
gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2... 52 4e-004
gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassino... 52 4e-004
gb|CW203376.1|CW203376 104_631_11185990_148_36906_095 Sorgh... 50 0.002
gb|CW237955.1|CW237955 104_694_11216459_116_37393_038 Sorgh... 50 0.002
gb|CW315000.1|CW315000 104_805_11472128_116_35818_018 Sorgh... 50 0.002
gb|CW451925.1|CW451925 fsbb001f192d14f0 Sorghum methylation... 50 0.002
gb|CX608297.1|CX608297 ANR1_37_F12.g1_A002 Anaerobic roots ... 50 0.002
gb|CW113233.1|CW113233 104_487_11105330_148_34550_007 Sorgh... 48 0.006
gb|CW203375.1|CW203375 104_631_11185990_116_37062_095 Sorgh... 48 0.006
gb|CW244204.1|CW244204 104_705_11220467_116_37589_048 Sorgh... 48 0.006
gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorgh... 48 0.006
gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation... 48 0.006
gb|CW382739.1|CW382739 fsbb001f064o11f0 Sorghum methylation... 48 0.006
gb|CW382740.1|CW382740 fsbb001f064o11k0 Sorghum methylation... 48 0.006
gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1... 48 0.006
gb|CD212657.1|CD212657 HS1_6_E10.g1_A012 Heat-shocked seedl... 48 0.006
gb|CD424650.1|CD424650 SA1_8_F02.g1_A002 Salicylic acid-tre... 48 0.006
gb|CF074199.1|CF074199 FE1_21_C05.g1_A002 Iron-deficient se... 48 0.006
gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Me... 46 0.024
gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Me... 46 0.024
gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle... 46 0.024
gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle... 46 0.024
gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficie... 46 0.024
gb|CL161383.1|CL161383 104_352_10805682_114_31826_354 Sorgh... 44 0.095
gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorgh... 44 0.095
gb|CW187969.1|CW187969 104_607_11172768_116_36728_088 Sorgh... 44 0.095
gb|CW350793.1|CW350793 fsbb001f012e11f0 Sorghum methylation... 44 0.095
gb|CW420003.1|CW420003 fsbb001f126b21k0 Sorghum methylation... 44 0.095
gb|CW481818.1|CW481818 fsbb001f241j14f0 Sorghum methylation... 44 0.095
gb|CC058695.1|CC058695 ii14c05.b1 WGS-SbicolorF (DH5a methy... 42 0.37
gb|CW092424.1|CW092424 104_455_10999161_114_33045_047 Sorgh... 42 0.37
gb|CW093556.1|CW093556 104_456_10999845_116_33069_083 Sorgh... 42 0.37
gb|CW116979.1|CW116979 104_492_11107412_116_34607_066 Sorgh... 42 0.37
gb|CW202795.1|CW202795 104_629_11185285_148_36910_061 Sorgh... 42 0.37
gb|CW215502.1|CW215502 104_647_11194572_148_37163_034 Sorgh... 42 0.37
gb|CW233496.1|CW233496 104_686_11213456_148_37375_020 Sorgh... 42 0.37
gb|CW256168.1|CW256168 104_721_11226639_148_35142_062 Sorgh... 42 0.37
gb|CW330457.1|CW330457 104_827_11480385_116_36007_041 Sorgh... 42 0.37
gb|CW330458.1|CW330458 104_827_11480385_148_36008_041 Sorgh... 42 0.37
gb|CW344901.1|CW344901 104_847_11488203_148_36202_004 Sorgh... 42 0.37
gb|CW361556.1|CW361556 fsbb001f030d05k0 Sorghum methylation... 42 0.37
gb|CW420130.1|CW420130 fsbb001f126f01f0 Sorghum methylation... 42 0.37
gb|CW483604.1|CW483604 fsbb001f245f07k0 Sorghum methylation... 42 0.37
gb|BE125179.1|BE125179 DG1_14_A10.b1_A002 Dark Grown 1 (DG1... 42 0.37
gb|BF656753.1|BF656753 OV2_21_E05.g1_A002 Ovary 2 (OV2) Sor... 42 0.37
gb|BG051145.1|BG051145 FM1_56_H02.b1_A003 Floral-Induced Me... 42 0.37
gb|BG356696.1|BG356696 OV2_26_G08.g1_A002 Ovary 2 (OV2) Sor... 42 0.37
gb|BG465904.1|BG465904 RHIZ2_46_A10.g1_A003 Rhizome2 (RHIZ2... 42 0.37
gb|BG559932.1|BG559932 RHIZ2_75_E02.g1_A003 Rhizome2 (RHIZ2... 42 0.37
gb|BG560522.1|BG560522 RHIZ2_75_E02.b1_A003 Rhizome2 (RHIZ2... 42 0.37
gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (... 42 0.37
gb|BI075512.1|BI075512 IP1_21_D10.g1_A002 Immature pannicle... 42 0.37
gb|CD230751.1|CD230751 SS1_9_C09.b1_A012 Salt-stressed seed... 42 0.37
gb|CD235831.1|CD235831 SS1_24_G02.b1_A012 Salt-stressed see... 42 0.37
gb|CD429907.1|CD429907 ETH1_16_B10.b1_A002 Ethylene-treated... 42 0.37
gb|CF433131.1|CF433131 NIT1_25_B08.b1_A002 Nitrogen-deficie... 42 0.37
gb|CN147170.1|CN147170 WOUND1_48_C07.b1_A002 Wounded leaves... 42 0.37
gb|CX613217.1|CX613217 GABR1_7_A02.b1_A002 GA- or brassinol... 42 0.37
gb|CX614893.1|CX614893 GABR1_17_A10.b1_A002 GA- or brassino... 42 0.37
gb|DR831517.2|DR831517 MT42 Sorghum bicolor greenbug-respon... 42 0.37
gb|DV162747.1|DV162747 P2-N2 Sorghum bicolor greenbug-respo... 42 0.37
>gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_31_H09_A002 5', mRNA sequence
Length = 654
Score = 946 bits (477), Expect = 0.0
Identities = 575/608 (94%), Gaps = 6/608 (0%)
Strand = Plus / Minus
Query: 2929 gaatggttcacatagggaaatggagcacgcttgccaatgttcccagttggggacatcata 2988
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 652 gaatgattcacatagggaaatggagcgcgcttgccaatgttcccagttggggacatcata 593
Query: 2989 tgatggtcaggggaagcaccagggatttctcctgagatctggctgttagtgactgatggg 3048
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 592 tgatggtcaggggaagcaccagggatttctcccgagatctggctgttagtgactgacggg 533
Query: 3049 atgtatccccgaggaatctcgccactgtcatacttggtaagcccgatctcgccactgtca 3108
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 532 atgtatcctcgagggatctcaccactgtcatacttggtaagcccgatctcgccactgtca 473
Query: 3109 tacttggggcgaccaacatccccgctgcccccaacgttcatgcgccagctgcgcattctg 3168
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 472 tacttggggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatcctg 413
Query: 3169 tcggcaatcttctgcttctggtcctcattgccagatgcaaggtaattgaagtcgcta--- 3225
|| |||||||||||||| ||||| |||| |||||||||| |||| ||||||||||||
Sbjct: 412 tcagcaatcttctgcttatggtcatcatcgccagatgcagggtagttgaagtcgctagca 353
Query: 3226 ---tcggcatcagtgtcgtctccttcctccccacggatcgccgggctccccttgtggcgc 3282
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tcatcggcatcagtttcatctccttcctccccacggatcgccgggctccccttgtggcgc 293
Query: 3283 ttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcgtag 3342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcgtag 233
Query: 3343 caggggcggcacaccggaaacccgcagacgtcgcaggcggcgaagacgtccccctccgcc 3402
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 232 caggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtccccctccgcc 173
Query: 3403 gtggtgcccacgccgtcgccgcagatctggcacacctgtccgccaccgcgcctccccgac 3462
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 172 gtggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccgcgcctccccgac 113
Query: 3463 ttcacgccgtccgcgtcgccctccatggcaagcgagctcgccgagaaacgtcgagggagc 3522
|||||||||||||||||||||||||||||| ||||||||||| |||| || |||||||||
Sbjct: 112 ttcacgccgtccgcgtcgccctccatggcaggcgagctcgccaagaaccgacgagggagc 53
Query: 3523 tggcctgg 3530
| ||||||
Sbjct: 52 tagcctgg 45
Score = 44.1 bits (22), Expect = 0.095
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3548 gagccggcaccagtcccgagatccga 3573
|||||||||||| |||||||||||||
Sbjct: 26 gagccggcaccactcccgagatccga 1
>gb|BG465505.1|BG465505 RHIZ2_45_D07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 551
Score = 841 bits (424), Expect = 0.0
Identities = 493/516 (95%)
Strand = Plus / Minus
Query: 2710 gatagaggctgtcgagtttcgtcgttcaataaggcatcttccatgttgtaatcagttgat 2769
||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 551 gatagaggctggcgagtttcatcgttcaataaggcatcttccatgttataatcagttgat 492
Query: 2770 gcatcaatatcaccaacaccccgaccctcagagggagcaatgcttgtgccattcgtcatg 2829
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 491 gcatcaatatcaccaacaccccgaccctcagagggagcaatgcttgtgccatttgtcatg 432
Query: 2830 ggaatcgtccccttgtcctgcttcattttccagccatcaaccctctctttccaggcaaca 2889
||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ggaattgttcccttatcctgtttcattttccagccatcaaccctctctttccaggcaaca 372
Query: 2890 ttcccaatgctaccagagaactcccttgacggatttggcgaatggttcacatagggaaat 2949
|||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 371 ttcccaatgctaccagagaattcccttgacggatttggtgaatgattcacatagggaaat 312
Query: 2950 ggagcacgcttgccaatgttcccagttggggacatcatatgatggtcaggggaagcacca 3009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggagcacgcttgccaatgttcccagttggggacatcatatgatggtcaggggaagcacca 252
Query: 3010 gggatttctcctgagatctggctgttagtgactgatgggatgtatccccgaggaatctcg 3069
||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 251 gggatttctcccgagatctggctgttagtgactgacgggatgtatccccgagggatctca 192
Query: 3070 ccactgtcatacttggtaagcccgatctcgccactgtcatacttggggcgaccaacatcc 3129
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 191 ccactgtcatacttggtaagcccgatctcgccactgtcatacttggggcggccaacatcc 132
Query: 3130 ccgctgcccccaacgttcatgcgccagctgcgcattctgtcggcaatcttctgcttctgg 3189
|||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 131 ccgctgcccccagcgttcatgcgccagctgcgcatcctgtcagcaatcttctgcttctgg 72
Query: 3190 tcctcattgccagatgcaaggtaattgaagtcgcta 3225
|| || |||||||||||| |||| ||||||||||||
Sbjct: 71 tcatcgttgccagatgcagggtagttgaagtcgcta 36
>gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 455
Score = 841 bits (424), Expect = 0.0
Identities = 442/448 (98%)
Strand = Plus / Minus
Query: 2014 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttctgt 2073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttctgt 396
Query: 2074 gccttagcaacaaggccatttaccctaactttgaattcttcatattctctcttcatggcc 2133
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 395 gccttagcaacaaggccatttatcctaactttgaattcttcatattctctcttcatggct 336
Query: 2134 cggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgggag 2193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 335 cggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctggcag 276
Query: 2194 aagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggtacccatttt 2253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggtacccatttt 216
Query: 2254 ctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatcgcagctccatcatca 2313
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 215 ctagcaaactctgaagtctcagctagtgcatcaaatgtcagcattgcagctccatcatca 156
Query: 2314 gatacatagcaagagaccttatccacagggtaatccacagcaagaatggatagcacggta 2373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gatacatagcaagagaccttatccacagggtaatccacagcaagaatggatagcacggta 96
Query: 2374 ttggcagtgacaagaggaggctccttcattgggtcgactgtactgacgaaaatgtcaaca 2433
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ttggcagtaacaagaggaggctccttcattgggtcgactgtactgacgaaaatgtcaaca 36
Query: 2434 gcagccaactgagatggctcaccttccc 2461
||||||||||||||||| ||||||||||
Sbjct: 35 gcagccaactgagatggttcaccttccc 8
>gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_F06_A007 5', mRNA sequence
Length = 639
Score = 773 bits (390), Expect = 0.0
Identities = 555/610 (90%)
Strand = Plus / Minus
Query: 802 aagagggagatgaaccagatgctggcgaagttgctgatctctggaatgatgaactttccg 861
||||| || |||||||| || || ||||||||||| ||||||||||||||||| |||||
Sbjct: 610 aagagagaaatgaaccaaatactagcgaagttgctaatctctggaatgatgaattttcca 551
Query: 862 gtgagcagacagatggcgggcaggatgcagtagatgagaagcgggatggacgtgagcggg 921
||||||||||||||||| ||||| || || || |||||||| ||||| || |||||||||
Sbjct: 550 gtgagcagacagatggcaggcagaatacaataaatgagaagtgggatagatgtgagcggg 491
Query: 922 tagatggtggtgttgatgtacgcgaatctctccaggaacttgagccgccctccgtagccg 981
|| ||||||||||||||||| || |||||||||| |||||| || || ||||| ||||||
Sbjct: 490 taaatggtggtgttgatgtaagcaaatctctccaagaacttcaggcgtcctccatagccg 431
Query: 982 taccacagggggcagtgccggctgaagaggatctccacggacccaagagcccaccggagc 1041
||||| | |||||| ||||||||||| || || ||||| || ||||||||||||||||||
Sbjct: 430 taccataaggggcaatgccggctgaaaagaatttccacagaaccaagagcccaccggagc 371
Query: 1042 acctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttg 1101
|| ||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 370 acttggttcagacgatctgaaagattgatgggagcagatcccttgaaagctggccgctta 311
Query: 1102 ggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtct 1161
||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||| |||
Sbjct: 310 ggcatgcagtaaatcgaccgccagcctcgtgcgtgcatcttgaatccagtaagaatatct 251
Query: 1162 tctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatag 1221
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 250 tctgtcacagaaccatagatccacccaatctcagttccccattcagtcttgtcctcatag 191
Query: 1222 ccacagcttataacatggatagcttctttcagaagagactccggagttgcggactgagga 1281
||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 190 ccacaacttataacatggatagcttctttcagaagagattccggagttgcagactgagga 131
Query: 1282 acaccaccatactccatcagagtggaggcaacaaacgctgcggactggccaaatctcttc 1341
||||||||||| ||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 130 acaccaccatattccatcagagtggaggcaacaaaagctgcggattgaccaaatctcttc 71
Query: 1342 tccaggctcatttgagacataagaagtgatttctcgtcgtcaaatccagcgccttcaact 1401
|||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 70 tccaagctcatttgagacataagaagtgatttctcatcatcaaatccagcgccttcaact 11
Query: 1402 ccctcctcta 1411
||||||||||
Sbjct: 10 ccctcctcta 1
>gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_13_G11_A012 5', mRNA sequence
Length = 610
Score = 763 bits (385), Expect = 0.0
Identities = 474/504 (94%), Gaps = 6/504 (1%)
Strand = Plus / Minus
Query: 3033 gttagtgactgatgggatgtatccccgaggaatctcgccactgtcatacttggtaagccc 3092
|||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 610 gttagtgactgacgggatgtatccccgagggatctcaccactgtcatacttagtaagccc 551
Query: 3093 gatctcgccactgtcatacttggggcgaccaacatccccgctgcccccaacgttcatgcg 3152
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 550 gatctcgccactgtcatacttggggcggccaacatccccgctgcccccagcgttcatgcg 491
Query: 3153 ccagctgcgcattctgtcggcaatcttctgcttctggtcctcattgccagatgcaaggta 3212
|||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||| ||||
Sbjct: 490 ccagctgcgcatcctgtcagcaatcttatgcttctggtcatcattgccagatgcagggta 431
Query: 3213 attgaagtcgcta------tcggcatcagtgtcgtctccttcctccccacggatcgccgg 3266
|||||||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct: 430 gttgaagtcgctagcatcatcggcatcagtttcatctccttcctccccacggatcgccgg 371
Query: 3267 gctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcctt 3326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcctt 311
Query: 3327 gcgctcgtactcgtagcaggggcggcacaccggaaacccgcagacgtcgcaggcggcgaa 3386
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 310 gcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaa 251
Query: 3387 gacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgtccgcc 3446
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 250 gacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcc 191
Query: 3447 accgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaagcgagctcgccga 3506
||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 190 cccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcacgcgagctcaccaa 131
Query: 3507 gaaacgtcgagggagctggcctgg 3530
||| || |||||||||| ||||||
Sbjct: 130 gaaccgacgagggagctagcctgg 107
Score = 77.8 bits (39), Expect = 7e-012
Identities = 67/77 (87%), Gaps = 7/77 (9%)
Strand = Plus / Minus
Query: 3548 gagccggcaccagtcccgagatccgagc-------ggggcacggatcaacaccgcatctc 3600
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 88 gagccggcaccactcccgagatccgagcagggaggggggcacggatcagcaccgcatctc 29
Query: 3601 ccgctgcgagagcgctg 3617
|||||||||||| ||||
Sbjct: 28 ccgctgcgagagtgctg 12
>gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 495
Score = 751 bits (379), Expect = 0.0
Identities = 459/486 (94%), Gaps = 6/486 (1%)
Strand = Plus / Minus
Query: 3051 gtatccccgaggaatctcgccactgtcatacttggtaagcccgatctcgccactgtcata 3110
|||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gtatcctcgagggatctcaccactgtcatacttggtaagcccgatctcgccactgtcata 436
Query: 3111 cttggggcgaccaacatccccgctgcccccaacgttcatgcgccagctgcgcattctgtc 3170
||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 435 cttggggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatcctgtc 376
Query: 3171 ggcaatcttctgcttctggtcctcattgccagatgcaaggtaattgaagtcgcta----- 3225
|||||||||||||||||||| ||||||||||||||| |||| ||||||||||||
Sbjct: 375 agcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtcgctagcatc 316
Query: 3226 -tcggcatcagtgtcgtctccttcctccccacggatcgccgggctccccttgtggcgctt 3284
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atcggcatcagtttcatctccttcctccccacggatcgccgggctccccttgtggcgctt 256
Query: 3285 gtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcgtagca 3344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcgtagca 196
Query: 3345 ggggcggcacaccggaaacccgcagacgtcgcaggcggcgaagacgtccccctccgccgt 3404
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 195 ggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtccccctccgccgt 136
Query: 3405 ggtgcccacgccgtcgccgcagatctggcacacctgtccgccaccgcgcctccccgactt 3464
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 135 ggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccgcgcctccccgactt 76
Query: 3465 cacgccgtccgcgtcgccctccatggcaagcgagctcgccgagaaacgtcgagggagctg 3524
|||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||
Sbjct: 75 cacgccgtccgcgtcgccctccatggcaggcgagctcgccaagaaccgacgagggagcta 16
Query: 3525 gcctgg 3530
||||||
Sbjct: 15 gcctgg 10
>gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_19_D03_A002 5', mRNA sequence
Length = 552
Score = 743 bits (375), Expect = 0.0
Identities = 452/478 (94%), Gaps = 6/478 (1%)
Strand = Plus / Minus
Query: 3059 gaggaatctcgccactgtcatacttggtaagcccgatctcgccactgtcatacttggggc 3118
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gagggatctcaccactgtcatacttggtaagcccgatctcgccactgtcatacttggggc 493
Query: 3119 gaccaacatccccgctgcccccaacgttcatgcgccagctgcgcattctgtcggcaatct 3178
| ||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||
Sbjct: 492 ggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatcctgtcagcaatct 433
Query: 3179 tctgcttctggtcctcattgccagatgcaaggtaattgaagtcgcta------tcggcat 3232
||||||||||||| ||||||||||||||| |||| |||||||||||| |||||||
Sbjct: 432 tctgcttctggtcatcattgccagatgcagggtagttgaagtcgctagcatcatcggcat 373
Query: 3233 cagtgtcgtctccttcctccccacggatcgccgggctccccttgtggcgcttgtacttgg 3292
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cagtttcatctccttcctccccacggatcgccgggctccccttgtggcgcttgtacttgg 313
Query: 3293 tcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcgtagcaggggcggc 3352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcgtagcaggggcggc 253
Query: 3353 acaccggaaacccgcagacgtcgcaggcggcgaagacgtccccctccgccgtggtgccca 3412
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 252 acaccgggaacccgcagacgtcgcaggcggtgaagacgtccccctccgccgtggtgccca 193
Query: 3413 cgccgtcgccgcagatctggcacacctgtccgccaccgcgcctccccgacttcacgccgt 3472
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 192 cgccgtcgccgcagatctggcacacctgcccgcccccgcgcctccccgacttcacgccgt 133
Query: 3473 ccgcgtcgccctccatggcaagcgagctcgccgagaaacgtcgagggagctggcctgg 3530
|||||||||||||||||||| ||||||||||| |||| || |||||||||| ||||||
Sbjct: 132 ccgcgtcgccctccatggcaggcgagctcgccaagaaccgacgagggagctagcctgg 75
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3548 gagccggcaccagtcccgagatccgagc 3575
|||||||||||| |||||||||||||||
Sbjct: 56 gagccggcaccactcccgagatccgagc 29
>gb|BG559985.1|BG559985 RHIZ2_68_A11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 482
Score = 741 bits (374), Expect = 0.0
Identities = 448/473 (94%), Gaps = 6/473 (1%)
Strand = Plus / Minus
Query: 2839 cccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattcccaatg 2898
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cccttatcctgtttcattttccagccatcaaccctctctttccaggcaacattcccaatg 422
Query: 2899 ctaccagagaactcccttgacggatttggcgaatggttcacatagggaaatggagcacgc 2958
||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 421 ctaccagagaattcccttgacggatttggtgaatgattcacatagggaaatggagcacgc 362
Query: 2959 ttgccaatgttcccagttggggacatcatatgatggtcaggggaagcaccagggatttct 3018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgccaatgttcccagttggggacatcatatgatggtcaggggaagcaccagggatttct 302
Query: 3019 cctgagatctggctgttagtgactgatgggatgtatccccgaggaatctcgccactgtca 3078
|| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 301 cccgagatctggctgttagtgactgacgggatgtatccccgagggatctcaccactgtca 242
Query: 3079 tacttggtaagcccgatctcgccactgtcatacttggggcgaccaacatccccgctgccc 3138
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 241 tacttggtaagcccgatctcgccactgtcatacttggggcggccaacatccccgctgccc 182
Query: 3139 ccaacgttcatgcgccagctgcgcattctgtcggcaatcttctgcttctggtcctcattg 3198
||| |||||||||||||||||||||| ||||| |||||||||||||||||||| || |||
Sbjct: 181 ccagcgttcatgcgccagctgcgcatcctgtcagcaatcttctgcttctggtcatcgttg 122
Query: 3199 ccagatgcaaggtaattgaagtcgct------atcggcatcagtgtcgtctccttcctcc 3252
||||||||| |||| ||||||||||| |||||||||||| || ||||||||||||
Sbjct: 121 ccagatgcagggtagttgaagtcgctagcatcatcggcatcagtttcatctccttcctcc 62
Query: 3253 ccacggatcgccgggctccccttgtggcgcttgtacttggtcttgcactgggg 3305
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccacggatcgccgggctccccttgtggcgcttgtacttggtcttgcactgggg 9
>gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 585
Score = 729 bits (368), Expect = 0.0
Identities = 460/491 (93%), Gaps = 6/491 (1%)
Strand = Plus / Minus
Query: 3046 gggatgtatccccgaggaatctcgccactgtcatacttggtaagcccgatctcgccactg 3105
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 581 gggatgtatccccgagggatctcaccactgtcatacttggtaagcccgatctcgccactg 522
Query: 3106 tcatacttggggcgaccaacatccccgctgcccccaacgttcatgcgccagctgcgcatt 3165
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 521 tcatacttggggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatc 462
Query: 3166 ctgtcggcaatcttctgcttctggtcctcattgccagatgcaaggtaattgaagtcgcta 3225
||||| |||||||||||||||||||| || |||||||||||| |||| ||||||||||||
Sbjct: 461 ctgtcagcaatcttctgcttctggtcatcgttgccagatgcagggtagttgaagtcgcta 402
Query: 3226 ------tcggcatcagtgtcgtctccttcctccccacggatcgccgggctccccttgtgg 3279
||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gcatcatcggcatcagtttcatctccttcctccccacggatcgccgggctccccttgtgg 342
Query: 3280 cgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcg 3339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcg 282
Query: 3340 tagcaggggcggcacaccggaaacccgcagacgtcgcaggcggcgaagacgtccccctcc 3399
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||
Sbjct: 281 tagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtccccgtcc 222
Query: 3400 gccgtggtgcccacgccgtcgccgcagatctggcacacctgtccgccaccgcgcctcccc 3459
||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||||
Sbjct: 221 gccgtggtgcccacgccgtcgccacagatctggcacacctgcccgcccccacgcctcccc 162
Query: 3460 gacttcacgccgtccgcgtcgccctccatggcaagcgagctcgccgagaaacgtcgaggg 3519
||||||||||||||||||||||||||||||| | ||||||||||| |||| || ||||||
Sbjct: 161 gacttcacgccgtccgcgtcgccctccatgggaggcgagctcgccaagaaccgacgaggg 102
Query: 3520 agctggcctgg 3530
|||| ||||||
Sbjct: 101 agctagcctgg 91
Score = 60.0 bits (30), Expect = 2e-006
Identities = 55/64 (85%), Gaps = 7/64 (10%)
Strand = Plus / Minus
Query: 3548 gagccggcaccagtcccgagatccgagc-------ggggcacggatcaacaccgcatctc 3600
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 72 gagccggcaccactcccgagatccgagcagggaggggggcacggatcagcaccgcatctc 13
Query: 3601 ccgc 3604
||||
Sbjct: 12 ccgc 9
>gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 506
Score = 722 bits (364), Expect = 0.0
Identities = 464/496 (93%), Gaps = 6/496 (1%)
Strand = Plus / Minus
Query: 1177 tagatccacccgatctcagttccccattcagtcttgtcctcatagccacagcttataaca 1236
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 503 tagatccacccaatctcagttccccattcagtcttgtcctcatagccacaacttataaca 444
Query: 1237 tggatagcttctttcagaagagactccggagttgcggactgaggaacaccaccatactcc 1296
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 443 tggatagcttctttcagaagagattccggagttgcagactgaggaacaccaccatattcc 384
Query: 1297 atcagagtggaggcaacaaacgctgcggactggccaaatctcttctccaggctcatttga 1356
|||||||||||||||||||| ||||| || || |||||||||||||||| ||||||||||
Sbjct: 383 atcagagtggaggcaacaaaagctgcagattgaccaaatctcttctccaagctcatttga 324
Query: 1357 gacataagaagtgatttctcgtcgtcaaatccagcgccttcaactccctcctctatatct 1416
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 323 gacataagaagtgatttctcatcatcaaatccagcgccttcaactccctcctctatatct 264
Query: 1417 tcaaggttgaatactggcacagaactgtccacatgcttctgcgacttcttcttgtccgag 1476
|| || ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 263 tcgagattgaatactggcacagaactgtccacatgcttctgtgactttttcttgtctgag 204
Query: 1477 ccc---ttctttgatttgcttgccttcttcctaccgccacatagtgatgacaagaaacca 1533
||| |||||||||||| ||| ||||||||| || ||||||||||||||||||||||||
Sbjct: 203 cccttcttctttgatttgtttgtcttcttcctgccaccacatagtgatgacaagaaacca 144
Query: 1534 cccttcttc---tgcttaattgggggctcataaccatatagagctgttcggttgaaaaca 1590
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 143 cccttcttcttttgcttaattgggggctcataaccatatagagctgttctgttgaaaaca 84
Query: 1591 cagccagttccgacataaactggtccttggatgccatcaagacctctcaagttaataccg 1650
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 83 caaccagttcccacataaactggtccttggatgccatcaagacctctcaagttaatatca 24
Query: 1651 aaaaacacggtgttcc 1666
||||||||||||||||
Sbjct: 23 aaaaacacggtgttcc 8
>gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 528
Score = 712 bits (359), Expect = 0.0
Identities = 430/454 (94%), Gaps = 6/454 (1%)
Strand = Plus / Minus
Query: 3083 tggtaagcccgatctcgccactgtcatacttggggcgaccaacatccccgctgcccccaa 3142
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 523 tggtaagcccgatctcgccactgtcatacttggggcggccaacatccccgctgcccccag 464
Query: 3143 cgttcatgcgccagctgcgcattctgtcggcaatcttctgcttctggtcctcattgccag 3202
|||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||
Sbjct: 463 cgttcatgcgccagctgcgcatcctgtcagcaatcttctgcttctggtcatcattgccag 404
Query: 3203 atgcaaggtaattgaagtcgcta------tcggcatcagtgtcgtctccttcctccccac 3256
||||| |||| |||||||||||| ||||||||||| || ||||||||||||||||
Sbjct: 403 atgcagggtagttgaagtcgctagcatcatcggcatcagtttcatctccttcctccccac 344
Query: 3257 ggatcgccgggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcg 3316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggatcgccgggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcg 284
Query: 3317 tgccgtccttgcgctcgtactcgtagcaggggcggcacaccggaaacccgcagacgtcgc 3376
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 283 tgccgtccttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgc 224
Query: 3377 aggcggcgaagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcaca 3436
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aggcggtgaagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcaca 164
Query: 3437 cctgtccgccaccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaagcg 3496
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 163 cctgcccgcccccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaggcg 104
Query: 3497 agctcgccgagaaacgtcgagggagctggcctgg 3530
|||||||| |||| || |||||||||| ||||||
Sbjct: 103 agctcgccaagaaccgacgagggagctagcctgg 70
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3548 gagccggcaccagtcccgagatccgagc 3575
|||||||||||| |||||||||||||||
Sbjct: 51 gagccggcaccactcccgagatccgagc 24
Score = 44.1 bits (22), Expect = 0.095
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3064 atctcgccactgtcatacttgg 3085
||||||||||||||||||||||
Sbjct: 512 atctcgccactgtcatacttgg 491
>gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_18_E03_A002 5', mRNA sequence
Length = 531
Score = 654 bits (330), Expect = 0.0
Identities = 407/433 (93%), Gaps = 6/433 (1%)
Strand = Plus / Minus
Query: 3104 tgtcatacttggggcgaccaacatccccgctgcccccaacgttcatgcgccagctgcgca 3163
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 531 tgtcatacttggggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgca 472
Query: 3164 ttctgtcggcaatcttctgcttctggtcctcattgccagatgcaaggtaattgaagtcgc 3223
| ||||| |||||||||||||||||||| ||||||||||||||| |||| ||||||||||
Sbjct: 471 tcctgtcagcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtcgc 412
Query: 3224 ta------tcggcatcagtgtcgtctccttcctccccacggatcgccgggctccccttgt 3277
|| ||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 411 tagcatcatcggcatcagtttcatctccttcctccccacggatcgccgggctccccttgt 352
Query: 3278 ggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtact 3337
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 351 ggcgcttgtacttggtcttgcactgggggcgcgcctgcgtgccgtccttgcgctcgtact 292
Query: 3338 cgtagcaggggcggcacaccggaaacccgcagacgtcgcaggcggcgaagacgtccccct 3397
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 291 cgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtccccct 232
Query: 3398 ccgccgtggtgcccacgccgtcgccgcagatctggcacacctgtccgccaccgcgcctcc 3457
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 231 ccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccgcgcctcc 172
Query: 3458 ccgacttcacgccgtccgcgtcgccctccatggcaagcgagctcgccgagaaacgtcgag 3517
||||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||
Sbjct: 171 ccgacttcacgccgtccgcgtcgccctccatggcaggcgagctcgccaagaaccgacgag 112
Query: 3518 ggagctggcctgg 3530
||| || ||||||
Sbjct: 111 ggaactagcctgg 99
Score = 65.9 bits (33), Expect = 3e-008
Identities = 66/78 (84%), Gaps = 8/78 (10%)
Strand = Plus / Minus
Query: 3548 gagccggcaccagtcccgagatccgagcgggg--------cacggatcaacaccgcatct 3599
|||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 80 gagccggcaccactcccgagatccgagcagggggggggcgcacggatcagcaccgcatct 21
Query: 3600 cccgctgcgagagcgctg 3617
||||||||||||| ||||
Sbjct: 20 cccgctgcgagagtgctg 3
>gb|CN134244.1|CN134244 OX1_25_E01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_25_E01_A002 3', mRNA sequence
Length = 791
Score = 648 bits (327), Expect = 0.0
Identities = 390/411 (94%)
Strand = Plus / Minus
Query: 2815 gtgccattcgtcatgggaatcgtccccttgtcctgcttcattttccagccatcaaccctc 2874
|||||||||| ||||||||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct: 436 gtgccattcgccatgggaattgttcccttatcctgtttcattttccagccatcaaccctc 377
Query: 2875 tctttccaggcaacattcccaatgctaccagagaactcccttgacggatttggcgaatgg 2934
||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 376 tctttccaggcaacattcccaatgctaccagagaattcccttgacggatttggtgaatga 317
Query: 2935 ttcacatagggaaatggagcacgcttgccaatgttcccagttggggacatcatatgatgg 2994
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttcacatagggaaatggagcgcgcttgccaatgttcccagttggggacatcatatgatgg 257
Query: 2995 tcaggggaagcaccagggatttctcctgagatctggctgttagtgactgatgggatgtat 3054
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 256 tcaggggaagcaccagggatttctcccgagatctggctgttagtgactgacgggatgtat 197
Query: 3055 ccccgaggaatctcgccactgtcatacttggtaagcccgatctcgccactgtcatacttg 3114
|| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cctcgagggatctcaccactgtcatacttggtaagcccgatctcgccactgtcatacttg 137
Query: 3115 gggcgaccaacatccccgctgcccccaacgttcatgcgccagctgcgcattctgtcggca 3174
||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| |||
Sbjct: 136 gggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatcctgtcagca 77
Query: 3175 atcttctgcttctggtcctcattgccagatgcaaggtaattgaagtcgcta 3225
||||||||||||||||| ||||||||||||||| |||| ||||||||||||
Sbjct: 76 atcttctgcttctggtcatcattgccagatgcagggtagttgaagtcgcta 26
Score = 155 bits (78), Expect = 4e-035
Identities = 122/135 (90%), Gaps = 5/135 (3%)
Strand = Plus / Minus
Query: 42 aaaactcgtctgtcagccactctcctcaaagta---taaattatatcaacaaaagaatgc 98
|||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 747 aaaactcgtctgtcagacactctccacaaagtagtataacttatatcaacaaaagaatgc 688
Query: 99 atattaacacaagtaaaactttgtggtaaacaatatccactggtctgtacgtagctgtaa 158
|||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 687 atatcaacacaagtaa--ctttgtgataaacaatatcccctggtctgtacgtagctgtaa 630
Query: 159 ataacgccacttgct 173
|| ||||||| ||||
Sbjct: 629 atgacgccacctgct 615
Score = 133 bits (67), Expect = 1e-028
Identities = 91/99 (91%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 538 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 479
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaagga 335
||||||||||| ||||| ||||||||||||||||||||
Sbjct: 478 acgggtggtgaacgggtctatgcgaacccacagcaagga 440
>gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_66_G06_A012 5', mRNA sequence
Length = 537
Score = 636 bits (321), Expect = e-180
Identities = 403/431 (93%), Gaps = 6/431 (1%)
Strand = Plus / Minus
Query: 3106 tcatacttggggcgaccaacatccccgctgcccccaacgttcatgcgccagctgcgcatt 3165
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 537 tcatacttggggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatc 478
Query: 3166 ctgtcggcaatcttctgcttctggtcctcattgccagatgcaaggtaattgaagtcgcta 3225
||||| |||||||||||||||||||| ||||||||||||||| |||| ||||||||||||
Sbjct: 477 ctgtcagcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtcgcta 418
Query: 3226 ------tcggcatcagtgtcgtctccttcctccccacggatcgccgggctccccttgtgg 3279
||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gcatcatcggcatcagtttcatctccttcctccccacggatcgccgggctccccttgtgg 358
Query: 3280 cgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcg 3339
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 357 cgcttgtacttggtcttgcactgggggcacgcctgcgncccgtccttgcgctcgtactcg 298
Query: 3340 tagcaggggcggcacaccggaaacccgcagacgtcgcaggcggcgaagacgtccccctcc 3399
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 297 tagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtccccctcc 238
Query: 3400 gccgtggtgcccacgccgtcgccgcagatctggcacacctgtccgccaccgcgcctcccc 3459
|| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 237 gctgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccgcgcctcccc 178
Query: 3460 gacttcacgccgtccgcgtcgccctccatggcaagcgagctcgccgagaaacgtcgaggg 3519
||||||||||||||||||||||||||||||||| |||||||| || |||| || ||||||
Sbjct: 177 gacttcacgccgtccgcgtcgccctccatggcacgcgagctcaccaagaaccgacgaggg 118
Query: 3520 agctggcctgg 3530
|||| ||||||
Sbjct: 117 agctagcctgg 107
Score = 77.8 bits (39), Expect = 7e-012
Identities = 67/77 (87%), Gaps = 7/77 (9%)
Strand = Plus / Minus
Query: 3548 gagccggcaccagtcccgagatccgagc-------ggggcacggatcaacaccgcatctc 3600
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 88 gagccggcaccactcccgagatccgagcagggaggggggcacggatcagcaccgcatctc 29
Query: 3601 ccgctgcgagagcgctg 3617
|||||||||||| ||||
Sbjct: 28 ccgctgcgagagtgctg 12
>gb|BG273410.1|BG273410 OV2_25_D04.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 370
Score = 622 bits (314), Expect = e-176
Identities = 350/362 (96%)
Strand = Plus / Minus
Query: 2536 atccacgaaagagcaaaccagatctcacatataacagatagaagccataatgggtatgca 2595
||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 370 atccaggaaagagcgaaccagatctcacatataacagacagaagccataatgggtatgca 311
Query: 2596 ttgcgcacaggatttgtgatacggtagtgcaagaagatgcttagaacaatcaatcgcagc 2655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 310 ttgcgcacaggatttgtgatacggtagtgcaagaagatgcttagaacaatcaatcgtagc 251
Query: 2656 acaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagataga 2715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagataga 191
Query: 2716 ggctgtcgagtttcgtcgttcaataaggcatcttccatgttgtaatcagttgatgcatca 2775
||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 190 ggctggcgagtttcatcgttcaataaggcatcttccatgttataatcagttgatgcatca 131
Query: 2776 atatcaccaacaccccgaccctcagagggagcaatgcttgtgccattcgtcatgggaatc 2835
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 130 atatcaccaacaccccgaccctcagagggagcaatgctcgtgccattcgtcatgggaatt 71
Query: 2836 gtccccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattccca 2895
|| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gttcccttatcctgtttcattttccagccatcaaccctctctttccaggcaacattccca 11
Query: 2896 at 2897
||
Sbjct: 10 at 9
>gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 464
Score = 609 bits (307), Expect = e-172
Identities = 372/394 (94%), Gaps = 6/394 (1%)
Strand = Plus / Minus
Query: 3143 cgttcatgcgccagctgcgcattctgtcggcaatcttctgcttctggtcctcattgccag 3202
|||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||
Sbjct: 463 cgttcatgcgccagctgcgcatcctgtcagcaatcttctgcttctggtcatcattgccag 404
Query: 3203 atgcaaggtaattgaagtcgcta------tcggcatcagtgtcgtctccttcctccccac 3256
||||| |||| |||||||||||| ||||||||||| || ||||||||||||||||
Sbjct: 403 atgcagggtagttgaagtcgctagcatcatcggcatcagtttcatctccttcctccccac 344
Query: 3257 ggatcgccgggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcg 3316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggatcgccgggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcg 284
Query: 3317 tgccgtccttgcgctcgtactcgtagcaggggcggcacaccggaaacccgcagacgtcgc 3376
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 283 tgccgtccttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgc 224
Query: 3377 aggcggcgaagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcaca 3436
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aggcggtgaagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcaca 164
Query: 3437 cctgtccgccaccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaagcg 3496
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 163 cctgcccgcccccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaggcg 104
Query: 3497 agctcgccgagaaacgtcgagggagctggcctgg 3530
|||||||| |||| || |||||||||| ||||||
Sbjct: 103 agctcgccaagaaccgacgagggagctagcctgg 70
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3548 gagccggcaccagtcccgagatccgagc 3575
|||||||||||| |||||||||||||||
Sbjct: 51 gagccggcaccactcccgagatccgagc 24
>gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 669
Score = 535 bits (270), Expect = e-149
Identities = 504/582 (86%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 588 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 529
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggat 356
||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 528 acgggtggtgaacgggtcgatgcgaacccacagcaaggagaagatcgacgccaacaggat 469
Query: 357 ggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| || |||||||||||||||||||| |||| |||||||| |||||||||||
Sbjct: 468 tgcccagacaaccacgatggtcggggtgcggttttgccgacccatgagacccttgaggaa 409
Query: 417 cgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||| ||| || || |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 408 tgggtacaagtgcacaatcacccagaaggcgaagaagagcttgccaaagagtgggcccca 349
Query: 477 cgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgat 536
|| ||||| ||||||||||| || |||||||| || || || || || |||||||||||
Sbjct: 348 tgattggtaaccgctgttgatcgcataggagataccagcaacaacaccaaccaggttgat 289
Query: 537 gatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgc 596
|||||| ||||| || ||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 288 gatcagaatggtcgttggcgggatcagaagggttgtccacttgaacatgtacagctccgc 229
Query: 597 gaagtcgccgtcctcgtccgaggccttggaggtgacggtgaagttggtgtcgatgccggc 656
||||| ||||| || || |||||||| |||||||| ||||||||||||||||| || ||
Sbjct: 228 aaagtcaccgtcttcatctgaggcctttgaggtgacagtgaagttggtgtcgataccagc 169
Query: 657 cagcaccttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcac 716
||||||||||| || |||||||| |||||||| ||||| || ||||| || || || ||
Sbjct: 168 aagcaccttgaggagaccctggaagacggcgaaaaggtgggcagagatacctccaatgac 109
Query: 717 ccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctccag 776
|||||| || || ||||||||||||||||| || || || || |||||||||||||| ||
Sbjct: 108 ccagaattgttcattcctccaccactcgtcaattccaacaccactccacctcatctcgag 49
Query: 777 gatgcccgtggcgaagatcgagatgaagagggagatgaacca 818
||| || ||||| || || || || ||||| || ||||||||
Sbjct: 48 gataccagtggcaaaaattgaaataaagagagaaatgaacca 7
>gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_C03_A002 3', mRNA sequence
Length = 857
Score = 525 bits (265), Expect = e-147
Identities = 469/537 (87%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 539 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 480
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggat 356
||||||||||| ||||| |||||||||||||||||||||||||| || |||| ||||||
Sbjct: 479 acgggtggtgaacgggtctatgcgaacccacagcaaggagaagattgatgccaacaggat 420
Query: 357 ggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||
Sbjct: 419 tgcccagacaaccacgatggtcggggtgcggttttgccgacccatgagacctttgaggaa 360
Query: 417 cgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||| ||| || || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 359 tgggtacaagtgcacaatcacccagaaggcgaagaagagcttgccaaagagcgggcccca 300
Query: 477 cgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgat 536
|| ||||| ||||||||||| ||||||||||| || || || || || |||||||||||
Sbjct: 299 tgattggtaaccgctgttgatcgcgtaggagataccagcaacaacaccaaccaggttgat 240
Query: 537 gatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgc 596
|||||| ||||| || || |||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 239 gatcagaatggtcgttggtgggatcagaagcgttgtccacttgaacatgtacagctccgc 180
Query: 597 gaagtcgccgtcctcgtccgaggccttggaggtgacggtgaagttggtgtcgatgccggc 656
||||| ||||| || || |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 179 aaagtcaccgtcttcatctgaggcctttgaggtgacagtgaagttggtgtcgataccggc 120
Query: 657 cagcaccttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcac 716
||||||||||| || |||||||| |||||||| ||||| || ||||| || || || ||
Sbjct: 119 aagcaccttgaggagaccctggaagacggcgaaaaggtgggcagagatacctccaatgac 60
Query: 717 ccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctc 773
|||||| || || ||||||||||||||||| || || || || ||||||||||||||
Sbjct: 59 ccagaattgttcattcctccaccactcgtcaattccaacaccactccacctcatctc 3
Score = 155 bits (78), Expect = 4e-035
Identities = 122/135 (90%), Gaps = 5/135 (3%)
Strand = Plus / Minus
Query: 42 aaaactcgtctgtcagccactctcctcaaagta---taaattatatcaacaaaagaatgc 98
|||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 748 aaaactcgtctgtcagacactctccacaaagtagtataacttatatcaacaaaagaatgc 689
Query: 99 atattaacacaagtaaaactttgtggtaaacaatatccactggtctgtacgtagctgtaa 158
|||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 688 atatcaacacaagtaa--ctttgtgataaacaatatcccctggtctgtacgtagctgtaa 631
Query: 159 ataacgccacttgct 173
|| ||||||| ||||
Sbjct: 630 atgacgccacctgct 616
>gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_H10_A002 3', mRNA sequence
Length = 785
Score = 490 bits (247), Expect = e-136
Identities = 463/535 (86%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 535 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 476
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggat 356
||||||||||| ||||| |||||||||||||||||||||||||| || |||| ||||||
Sbjct: 475 acgggtggtgaacgggtctatgcgaacccacagcaaggagaagattgatgccaacaggat 416
Query: 357 ggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||
Sbjct: 415 tgcccagacaaccacgatggtcggggtgcggttttgccgacccatgagacctttgaggaa 356
Query: 417 cgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||| ||| || || ||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 355 tgggtacaagtgcacaatcacccaaaaggcgaagaaaagcttgccaaagagcgggcccca 296
Query: 477 cgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgat 536
|| ||||| ||||||||||| ||||||||||| || || || || || |||||||||||
Sbjct: 295 tgattggtaaccgctgttgatcgcgtaggagataccagcaacaacaccaaccaggttgat 236
Query: 537 gatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgc 596
|||||| ||||| || || |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 235 gatcagaatggtcgttggtgggatcagaaacgttgtccacttgaacatgtacagctccgc 176
Query: 597 gaagtcgccgtcctcgtccgaggccttggaggtgacggtgaagttggtgtcgatgccggc 656
||||| ||||| || || |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 175 aaagtcaccgtcttcatctgaggcctttgaggtgacagtgaaattggtgtcgataccggc 116
Query: 657 cagcaccttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcac 716
||||||||||| || |||||||| |||||||| ||||| || ||||| || || || ||
Sbjct: 115 aagcaccttgaggagaccctggaagacggcgaaaaggtgggcagagatacctccaatgac 56
Query: 717 ccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatc 771
|||||| || || ||||||||||||||||| || || || || ||||||||||||
Sbjct: 55 ccagaattgttcattcctccaccactcgtcaattccaacaccactccacctcatc 1
Score = 147 bits (74), Expect = 9e-033
Identities = 121/135 (89%), Gaps = 5/135 (3%)
Strand = Plus / Minus
Query: 42 aaaactcgtctgtcagccactctcctcaaagta---taaattatatcaacaaaagaatgc 98
|||||||||||||||| |||||||| ||||||| ||| ||||| ||||||||||||||
Sbjct: 744 aaaactcgtctgtcagacactctccacaaagtagtataacttataccaacaaaagaatgc 685
Query: 99 atattaacacaagtaaaactttgtggtaaacaatatccactggtctgtacgtagctgtaa 158
|||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 684 atatcaacacaagtaa--ctttgtgataaacaatatcccctggtctgtacgtagctgtaa 627
Query: 159 ataacgccacttgct 173
|| ||||||| ||||
Sbjct: 626 atgacgccacctgct 612
>gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810478, DNA
sequence
Length = 777
Score = 484 bits (244), Expect = e-134
Identities = 447/514 (86%), Gaps = 3/514 (0%)
Strand = Plus / Minus
Query: 305 tgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccaga 364
||||||||||||| | ||||| |||| |||||||||||| |||||||| | || |||||
Sbjct: 566 tgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccaga 507
Query: 365 cgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtaca 424
||| || ||||| || || | |||||| | |||||||| ||||||||||||||||| |
Sbjct: 506 tgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtaga 447
Query: 425 ggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggt 484
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 446 ggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactggt 387
Query: 485 acccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcagga 544
||||| |||||||||||| |||||||||||| |||||||||| | ||||||||| || |
Sbjct: 386 acccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttgatgatgagca 327
Query: 545 tggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgc 604
|||||||||||||| |||||||| ||||||||||| ||| ||||| ||||| |||
Sbjct: 326 gcgtggtgggcgggatgaggagcgtggtccacttgaatgcgtagagctcggcgaactcgt 267
Query: 605 cgtcctcgtcc---gaggccttggaggtgacggtgaagttggtgtcgatgccggccagca 661
|||||||||| | ||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 266 cgtcctcgtcgccggtggccttggaggtgacggtgaagttggtgtcgatccctgccagga 207
Query: 662 ccttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccaga 721
|||||||||||||||| | ||||||||||| ||||| || | ||| ||||| |||||||
Sbjct: 206 ccttgagcaggccctgcacgacggcgaagagatgcgccgacacgccgccgatgacccaga 147
Query: 722 actgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgc 781
|||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct: 146 actgctcgttcctccaccactcctcgatgctcaccccgctccaccgcatctccaggatgc 87
Query: 782 ccgtggcgaagatcgagatgaagagggagatgaa 815
|||| |||||||| || |||||||| | ||||||
Sbjct: 86 ccgtcgcgaagatggacatgaagagcgcgatgaa 53
>gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500738, DNA
sequence
Length = 854
Score = 484 bits (244), Expect = e-134
Identities = 447/514 (86%), Gaps = 3/514 (0%)
Strand = Plus / Plus
Query: 305 tgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccaga 364
||||||||||||| | ||||| |||| |||||||||||| |||||||| | || |||||
Sbjct: 171 tgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccaga 230
Query: 365 cgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtaca 424
||| || ||||| || || | |||||| | |||||||| ||||||||||||||||| |
Sbjct: 231 tgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtaga 290
Query: 425 ggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggt 484
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 291 ggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactggt 350
Query: 485 acccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcagga 544
||||| |||||||||||| |||||||||||| |||||||||| | ||||||||| || |
Sbjct: 351 acccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttgatgatgagca 410
Query: 545 tggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgc 604
|||||||||||||| |||||||| ||||||||||| ||| ||||| ||||| |||
Sbjct: 411 gcgtggtgggcgggatgaggagcgtggtccacttgaatgcgtagagctcggcgaactcgt 470
Query: 605 cgtcctcgtcc---gaggccttggaggtgacggtgaagttggtgtcgatgccggccagca 661
|||||||||| | ||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 471 cgtcctcgtcgccggtggccttggaggtgacggtgaagttggtgtcgatccctgccagga 530
Query: 662 ccttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccaga 721
|||||||||||||||| | ||||||||||| ||||| || | ||| ||||| |||||||
Sbjct: 531 ccttgagcaggccctgcacgacggcgaagagatgcgccgacacgccgccgatgacccaga 590
Query: 722 actgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgc 781
|||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct: 591 actgctcgttcctccaccactcctcgatgctcaccccgctccaccgcatctccaggatgc 650
Query: 782 ccgtggcgaagatcgagatgaagagggagatgaa 815
|||| |||||||| || |||||||| | ||||||
Sbjct: 651 ccgtcgcgaagatggacatgaagagcgcgatgaa 684
>gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472128, DNA
sequence
Length = 685
Score = 484 bits (244), Expect = e-134
Identities = 447/514 (86%), Gaps = 3/514 (0%)
Strand = Plus / Minus
Query: 305 tgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccaga 364
||||||||||||| | ||||| |||| |||||||||||| |||||||| | || |||||
Sbjct: 526 tgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccaga 467
Query: 365 cgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtaca 424
||| || ||||| || || | |||||| | |||||||| ||||||||||||||||| |
Sbjct: 466 tgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtaga 407
Query: 425 ggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggt 484
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 406 ggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactggt 347
Query: 485 acccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcagga 544
||||| |||||||||||| |||||||||||| |||||||||| | ||||||||| || |
Sbjct: 346 acccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttgatgatgagca 287
Query: 545 tggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgc 604
|||||||||||||| |||||||| ||||||||||| ||| ||||| ||||| |||
Sbjct: 286 gcgtggtgggcgggatgaggagcgtggtccacttgaatgcgtagagctcggcgaactcgt 227
Query: 605 cgtcctcgtcc---gaggccttggaggtgacggtgaagttggtgtcgatgccggccagca 661
|||||||||| | ||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 226 cgtcctcgtcgccggtggccttggaggtgacggtgaagttggtgtcgatccctgccagga 167
Query: 662 ccttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccaga 721
|||||||||||||||| | ||||||||||| ||||| || | ||| ||||| |||||||
Sbjct: 166 ccttgagcaggccctgcacgacggcgaagagatgcgccgacacgccgccgatgacccaga 107
Query: 722 actgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgc 781
|||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct: 106 actgctcgttcctccaccactcctcgatgctcaccccgctccaccgcatctccaggatgc 47
Query: 782 ccgtggcgaagatcgagatgaagagggagatgaa 815
|||| |||||||| || |||||||| | ||||||
Sbjct: 46 ccgtcgcgaagatggacatgaagagcgcgatgaa 13
>gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214849, DNA
sequence
Length = 601
Score = 474 bits (239), Expect = e-131
Identities = 439/505 (86%), Gaps = 3/505 (0%)
Strand = Plus / Plus
Query: 305 tgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccaga 364
||||||||||||| | ||||| |||| |||||||||||| |||||||| | || |||||
Sbjct: 90 tgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccaga 149
Query: 365 cgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtaca 424
||| || ||||| || || | |||||| | |||||||| ||||||||||||||||| |
Sbjct: 150 tgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtaga 209
Query: 425 ggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggt 484
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 210 ggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactggt 269
Query: 485 acccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcagga 544
||||| |||||||||||| |||||||||||| |||||||||| | ||||||||| || |
Sbjct: 270 acccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttgatgatgagca 329
Query: 545 tggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgc 604
|||||||||||||| |||||||| ||||||||||| ||| ||||| ||||| |||
Sbjct: 330 gcgtggtgggcgggatgaggagcgtggtccacttgaatgcgtagagctcggcgaactcgt 389
Query: 605 cgtcctcgtcc---gaggccttggaggtgacggtgaagttggtgtcgatgccggccagca 661
|||||||||| | ||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 390 cgtcctcgtcgccggtggccttggaggtgacggtgaagttggtgtcgatccctgccagga 449
Query: 662 ccttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccaga 721
|||||||||||||||| | || |||||||| ||||| || | ||| ||||| |||||||
Sbjct: 450 ccttgagcaggccctgcacgacagcgaagagatgcgccgacacgccgccgatgacccaga 509
Query: 722 actgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgc 781
|||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct: 510 actgctcgttcctccaccactcctcgatgctcaccccgctccaccgcatctccaggatgc 569
Query: 782 ccgtggcgaagatcgagatgaagag 806
|||| |||||||| || ||||||||
Sbjct: 570 ccgtcgcgaagatggacatgaagag 594
>gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214849, DNA
sequence
Length = 686
Score = 452 bits (228), Expect = e-124
Identities = 374/422 (88%), Gaps = 3/422 (0%)
Strand = Plus / Minus
Query: 397 cccatgaggcccttgaggaacgggtacaggtggacgatgacccagaaggcgaagaagagc 456
|||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 680 cccatgagccccttgaggaacgggtagaggtggacgatgacccagaatgcgaagaagagc 621
Query: 457 ttgccgaagagcgggccccacgactggtacccgctgttgatggcgtaggagatgccggcg 516
|||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||
Sbjct: 620 ttgccgaagagcgggccccatgactggtacccgttgttgatggcgtcggagatgccggcc 561
Query: 517 acgacgccgaccaggttgatgatcaggatggtggtgggcgggatcaggagcgtcgtccac 576
|||||||||| | ||||||||| || | |||||||||||||| |||||||| ||||||
Sbjct: 560 acgacgccgatgatgttgatgatgagcagcgtggtgggcgggatgaggagcgtggtccac 501
Query: 577 ttgaacatgtacagctccgcgaagtcgccgtcctcgtcc---gaggccttggaggtgacg 633
||||| ||| ||||| ||||| ||| |||||||||| | ||||||||||||||||
Sbjct: 500 ttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggtggccttggaggtgacg 441
Query: 634 gtgaagttggtgtcgatgccggccagcaccttgagcaggccctggaacacggcgaagagg 693
||||||||||||||||| || ||||| ||||||||||||||||| | |||||||||||
Sbjct: 440 gtgaagttggtgtcgatccctgccaggaccttgagcaggccctgcacgacggcgaagaga 381
Query: 694 tgcgcggagatgcccccgatcacccagaactgctcgttcctccaccactcgtcgatgccc 753
||||| || | ||| ||||| ||||||||||||||||||||||||||||| ||||||| |
Sbjct: 380 tgcgccgacacgccgccgatgacccagaactgctcgttcctccaccactcctcgatgctc 321
Query: 754 accccgctccacctcatctccaggatgcccgtggcgaagatcgagatgaagagggagatg 813
||||||||||||| |||||||||||||||||| |||||||| || |||||||| | ||||
Sbjct: 320 accccgctccaccgcatctccaggatgcccgtcgcgaagatggacatgaagagcgcgatg 261
Query: 814 aa 815
||
Sbjct: 260 aa 259
Score = 69.9 bits (35), Expect = 2e-009
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 847 atgatgaactttccggtgagcagacagatggcgggcaggatgcagtagatgagaagcggg 906
||||||||||| |||||||| || || | |||||| ||| | |||||| ||| ||||||
Sbjct: 125 atgatgaacttgccggtgaggaggcatacggcggggagggtacagtaggcgagcagcggg 66
Query: 907 atggacgtgagcgggtagatggtggtgttgatgtacgcgaatctctccaggaacttgag 965
| || |||| ||||||||||||||||||||||| ||||| | |||||| |||||||
Sbjct: 65 agcgaggtgaaagggtagatggtggtgttgatgtaggcgaagcgctccagccacttgag 7
>gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 448 bits (226), Expect = e-123
Identities = 411/472 (87%), Gaps = 3/472 (0%)
Strand = Plus / Minus
Query: 397 cccatgaggcccttgaggaacgggtacaggtggacgatgacccagaaggcgaagaagagc 456
|||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 472 cccatgagccccttgaggaacgggtagaggtggacgatgacccataatgcgaagaagagc 413
Query: 457 ttgccgaagagcgggccccacgactggtacccgctgttgatggcgtaggagatgccggcg 516
|||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||
Sbjct: 412 ttgccgaagagcgggccccatgactggtacccgttgttgatggcgtcggagatgccggcc 353
Query: 517 acgacgccgaccaggttgatgatcaggatggtggtgggcgggatcaggagcgtcgtccac 576
|||||||||| | ||||||||| || | |||||||||||||| |||||||| ||||||
Sbjct: 352 acgacgccgatgatgttgatgatgagcagcgtggtgggcgggatgaggagcgtggtccac 293
Query: 577 ttgaacatgtacagctccgcgaagtcgccgtcctcgtcc---gaggccttggaggtgacg 633
||||| ||| ||||| ||||| ||| |||||||||| | ||||||||||||||||
Sbjct: 292 ttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggtggccttggaggtgacg 233
Query: 634 gtgaagttggtgtcgatgccggccagcaccttgagcaggccctggaacacggcgaagagg 693
||||||||||||||||| || ||||| ||||||||||||||||| | |||||||||||
Sbjct: 232 gtgaagttggtgtcgatccctgccaggaccttgagcaggccctgcacgacggcgaagaga 173
Query: 694 tgcgcggagatgcccccgatcacccagaactgctcgttcctccaccactcgtcgatgccc 753
||||| || | ||| ||||| ||||||||||||||||||||||||||||| ||||||| |
Sbjct: 172 tgcgccgacacgccgccgatgacccagaactgctcgttcctccaccactcctcgatgctc 113
Query: 754 accccgctccacctcatctccaggatgcccgtggcgaagatcgagatgaagagggagatg 813
||||||||||||| |||||||||||||||||| |||||||| || |||||||| | ||||
Sbjct: 112 accccgctccaccgcatctccaggatgcccgtcgcgaagatggacatgaagagcgcgatg 53
Query: 814 aaccagatgctggcgaagttgctgatctctggaatgatgaactttccggtga 865
|| | | ||||||||| |||| ||| || ||||||||||| |||||||
Sbjct: 52 aagaacaagctggcgaacgtgctaatcgacggcatgatgaacttgccggtga 1
>gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_31_H09_A002 3', mRNA sequence
Length = 705
Score = 434 bits (219), Expect = e-119
Identities = 399/459 (86%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 462 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 403
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggat 356
||||||||||| ||||| |||||||||||||||||||||||||| || |||| ||||||
Sbjct: 402 acgggtggtgaacgggtctatgcgaacccacagcaaggagaagattgatgccaacaggat 343
Query: 357 ggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaa 416
||||| || || |||||||||||||||||||| |||| |||||||| || ||||||||
Sbjct: 342 tgcccaaacaaccacgatggtcggggtgcggttttgccgacccatgagacctttgaggaa 283
Query: 417 cgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||| ||| || || |||||||||||||| || |||||||| || |||||||||||
Sbjct: 282 tgggtacaagtgcacaatcacccagaaggcgaaaaaaagcttgccaaaaagcgggcccca 223
Query: 477 cgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgat 536
|| ||||| ||||||||||| ||||||||||| || || || || || |||||||||||
Sbjct: 222 tgattggtaaccgctgttgatcgcgtaggagataccagcaacaacaccaaccaggttgat 163
Query: 537 gatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgc 596
||||| ||||| || || ||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 162 gatcaaaatggtcgttggtgggatcaaaagcgttgtccacttgaacatgtacagctccgc 103
Query: 597 gaagtcgccgtcctcgtccgaggccttggaggtgacggtgaagttggtgtcgatgccggc 656
||||| ||||| || || |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 102 aaagtcaccgtcttcatctgaggcctttgaggtgacagtgaagttggtgtcgataccggc 43
Query: 657 cagcaccttgagcaggccctggaacacggcgaagaggtg 695
||||||||||| || |||||||| |||||||| |||||
Sbjct: 42 aagcaccttgaggagaccctggaagacggcgaaaaggtg 4
Score = 155 bits (78), Expect = 4e-035
Identities = 122/135 (90%), Gaps = 5/135 (3%)
Strand = Plus / Minus
Query: 42 aaaactcgtctgtcagccactctcctcaaagta---taaattatatcaacaaaagaatgc 98
|||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 671 aaaactcgtctgtcagacactctccacaaagtagtataacttatatcaacaaaagaatgc 612
Query: 99 atattaacacaagtaaaactttgtggtaaacaatatccactggtctgtacgtagctgtaa 158
|||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 611 atatcaacacaagtaa--ctttgtgataaacaatatcccctggtctgtacgtagctgtaa 554
Query: 159 ataacgccacttgct 173
|| ||||||| ||||
Sbjct: 553 atgacgccacctgct 539
>gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_C04_A002 5', mRNA sequence
Length = 789
Score = 412 bits (208), Expect = e-112
Identities = 580/701 (82%), Gaps = 6/701 (0%)
Strand = Plus / Minus
Query: 547 gtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccg 606
|||||||||||||| |||||||| ||||||||||| ||| ||||| ||||| ||| ||
Sbjct: 761 gtggtgggcgggatgaggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcg 702
Query: 607 tcctcgtcc---gaggccttggaggtgacggtgaagttggtgtcgatgccggccagcacc 663
|||||||| | ||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 701 tcctcgtcgccggtggccttggaggtgacggtgaagttggtgtcgatccctgccaggacc 642
Query: 664 ttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaac 723
|||||||||||||| | ||||||||||| ||||| || | ||| ||||| |||||||||
Sbjct: 641 ttgagcaggccctgcacgacggcgaagagatgcgccgacacgccgccgatgacccagaac 582
Query: 724 tgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgccc 783
|||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||
Sbjct: 581 tgctcgttcctccaccactcctcgatgctcaccccgctccaccgcatctccaggatgccc 522
Query: 784 gtggcgaagatcgagatgaagagggagatgaaccagatgctggcgaagttgctgatctct 843
|| |||||||| || |||||||| | |||||| | | ||||||||| |||| |||
Sbjct: 521 gtcgcgaagatggacatgaagagcgcgatgaagaacaagctggcgaacgtgctaatcgac 462
Query: 844 ggaatgatgaactttccggtgagcagacagatggcgggcaggatgcagtagatgagaagc 903
|| ||||||||||| |||||||| || || | |||||| ||| | |||||| ||| |||
Sbjct: 461 ggcatgatgaacttgccggtgaggaggcatacggcggggagggtacagtaggcgagcagc 402
Query: 904 gggatggacgtgagcgggtagatggtggtgttgatgtacgcgaatctctccaggaacttg 963
|||| || |||| ||||||||||||||||||||||| ||||| | |||||| |||||
Sbjct: 401 gggagcgaggtgaaagggtagatggtggtgttgatgtaggcgaagcgctccagccacttg 342
Query: 964 a-gccgccctcc--gtagccgtaccacagggggcagtgccggctgaagaggatctccacg 1020
| | ||| | | |||||||||| ||| |||| ||| |||||||||| |||||| |||
Sbjct: 341 aggttgccgttcttgtagccgtacagcagcgggctgtggcggctgaagaagatctcgacg 282
Query: 1021 gacccaagagcccaccggagcacctggttcagacggtccgaaagattgatgggggcagac 1080
||||| || |||||||||||||||||||| |||||||| || ||||||||||| || |||
Sbjct: 281 gaccccagcgcccaccggagcacctggttgagacggtcggatagattgatgggcgccgac 222
Query: 1081 cccttgaaagctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcgtgcatc 1140
|||||||| || | |||||| ||||||||||| | || ||||| || || |||||||
Sbjct: 221 cccttgaacgccgcccgcttcggcatgcagtacacggagcgccacccgcggcagtgcatc 162
Query: 1141 ttgaatccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctcagttccc 1200
||||| || || || ||||| || || | || |||||||||||||| | ||| ||||
Sbjct: 161 ttgaaccccgtcaggatgtcctccgtgatcgacccgtagatccacccaagctccagtccc 102
Query: 1201 cattcagtcttgtcctcatagccacagcttataacatggat 1241
|| || ||||||||||| ||||| ||||| || ||||||||
Sbjct: 101 cagtcggtcttgtcctcgtagccgcagctgatgacatggat 61
>gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 473
Score = 410 bits (207), Expect = e-112
Identities = 381/440 (86%)
Strand = Plus / Minus
Query: 1894 tggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattgccctca 1953
|||||||||||||| ||||||||||| ||||| |||||||| || || |||||||| |||
Sbjct: 472 tggaatccaggacgtttttcacgagacacataaaccaaacgaggaagttcattgccgtca 413
Query: 1954 gtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtcccnggta 2013
|||||||| |||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 412 acgtcaaggcctccactgtgacntaggaaaacctgaatcattccaggatggtccctagta 353
Query: 2014 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttctgt 2073
||||| | ||||| ||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 352 ttgttcncaggccaaggtgtaccatcttgcatgatccatccctcctcaggaactttttgt 293
Query: 2074 gccttagcaacaaggccatttaccctaactttgaattcttcatattctctcttcatggcc 2133
||||| || || ||| |||| | | |||||||||||||||||||||||||||||||||
Sbjct: 292 gccttggctactagggcattgatacggactttgaattcttcatattctctcttcatggcc 233
Query: 2134 cggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgggag 2193
||||| ||||| |||||||||| || |||||||| |||||||||||||||||||| |
Sbjct: 232 cggcgttctttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagca 173
Query: 2194 aagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggtacccatttt 2253
|||||||| || || || ||||| || ||||||||||||||| ||||| |||||||||
Sbjct: 172 aagtaccactctggggccctaggctctatgttgtacttcttacagaatggaacccatttt 113
Query: 2254 ctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatcgcagctccatcatca 2313
||||||||||||||||| |||| || |||||||| |||||||| ||||| |||||||||
Sbjct: 112 ctagcaaactctgaagtttcagagagcgcatcaaaagtcagcatagcagccccatcatca 53
Query: 2314 gatacatagcaagagacctt 2333
|| ||||||||||| |||||
Sbjct: 52 gaaacatagcaagatacctt 33
>gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_23_E06_A010 3', mRNA sequence
Length = 633
Score = 404 bits (204), Expect = e-110
Identities = 330/372 (88%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 380 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 321
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggat 356
||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 320 acgggtggtgaacgggtcgatgcgaacccacagcaaggagaagatcgacgccaacaggat 261
Query: 357 ggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| || |||||||||||||||||||| |||| |||||||| |||||||||||
Sbjct: 260 tgcccagacaaccacgatggtcggggtgcggttttgccgacccatgagacccttgaggaa 201
Query: 417 cgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||| ||| || || |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 200 tgggtacaagtgcacaatcacccagaaggcgaagaagagcttgccaaagagtgggcccca 141
Query: 477 cgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgat 536
|| ||||| ||||||||||| || |||||||| || || || || || |||||||||||
Sbjct: 140 tgattggtaaccgctgttgatcgcataggagataccagcaacaacaccaaccaggttgat 81
Query: 537 gatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgc 596
|||||| ||||| || ||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 80 gatcagaatggtcgttggcgggatcagaagggttgtccacttgaacatgtacagctccgc 21
Query: 597 gaagtcgccgtc 608
||||| |||||
Sbjct: 20 aaagtcaccgtc 9
Score = 168 bits (85), Expect = 2e-039
Identities = 120/130 (92%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 42 aaaactcgtctgtcagccactctcctcaaagta---taaattatatcaacaaaagaatgc 98
||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 589 aaaactcgtctgtcagccactctccacaaagtagtataacttatatcaacaaaagaatgc 530
Query: 99 atattaacacaagtaaaactttgtggtaaacaatatccactggtctgtacgtagctgtaa 158
|||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 529 atatcaacacaagtaa--ctttgtgataaacaatatcccctggtctgtacgtagctgtaa 472
Query: 159 ataacgccac 168
||||||||||
Sbjct: 471 ataacgccac 462
>gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_19_D03_A002 3', mRNA sequence
Length = 615
Score = 402 bits (203), Expect = e-110
Identities = 341/387 (88%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 390 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 331
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggat 356
||||||||||| ||||| |||||||||||||||||||||||||| || |||| ||||||
Sbjct: 330 acgggtggtgaacgggtctatgcgaacccacagcaaggagaagatcgatgccaacaggat 271
Query: 357 ggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||
Sbjct: 270 tgcccagacaaccacgatggtcggggtgcggttttgccgacccatgagacctttgaggaa 211
Query: 417 cgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||| ||| || || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 210 tgggtacaagtgcacaatcacccagaaggcgaagaagagcttgccaaagagcgggcccca 151
Query: 477 cgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgat 536
|| ||||| ||||||||||| ||||||||||| || || || || || |||||||||||
Sbjct: 150 tgattggtaaccgctgttgatcgcgtaggagataccagcaacaacaccaaccaggttgat 91
Query: 537 gatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgc 596
|||||| ||||| || || |||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 90 gatcagaatggtcgttggtgggatcagaagcgttgtccacttgaacatgtacagctccgc 31
Query: 597 gaagtcgccgtcctcgtccgaggcctt 623
||||| ||||| || || ||||||||
Sbjct: 30 aaagtcaccgtcttcatctgaggcctt 4
Score = 155 bits (78), Expect = 4e-035
Identities = 122/135 (90%), Gaps = 5/135 (3%)
Strand = Plus / Minus
Query: 42 aaaactcgtctgtcagccactctcctcaaagta---taaattatatcaacaaaagaatgc 98
|||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 598 aaaactcgtctgtcagacactctccacaaagtagtataacttatatcaacaaaagaatgc 539
Query: 99 atattaacacaagtaaaactttgtggtaaacaatatccactggtctgtacgtagctgtaa 158
|||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 538 atatcaacacaagtaa--ctttgtgataaacaatatcccctggtctgtacgtagctgtaa 481
Query: 159 ataacgccacttgct 173
|| ||||||| ||||
Sbjct: 480 atgacgccacctgct 466
>gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 396 bits (200), Expect = e-108
Identities = 329/372 (88%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 381 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 322
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggat 356
||||||||||| ||||| |||||||||||||||||||||||||| || |||| ||||||
Sbjct: 321 acgggtggtgaacgggtctatgcgaacccacagcaaggagaagattgatgccaacaggat 262
Query: 357 ggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||
Sbjct: 261 tgcccagacaaccacgatggtcggggtgcggttttgccgacccatgagacctttgaggaa 202
Query: 417 cgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||| ||| || || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tgggtacaagtgcacaatcacccagaaggcgaagaagagcttgccaaagagcgggcccca 142
Query: 477 cgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgat 536
|| ||||| ||||||||||| ||||||||||| || || || || || |||||||||||
Sbjct: 141 tgattggtaaccgctgttgatcgcgtaggagataccagcaacaacaccaaccaggttgat 82
Query: 537 gatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgc 596
|||||| ||||| || || |||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 81 gatcagaatggtcgttggtgggatcagaagcgttgtccacttgaacatgtacagctccgc 22
Query: 597 gaagtcgccgtc 608
||||| |||||
Sbjct: 21 aaagtcaccgtc 10
Score = 155 bits (78), Expect = 4e-035
Identities = 122/135 (90%), Gaps = 5/135 (3%)
Strand = Plus / Minus
Query: 42 aaaactcgtctgtcagccactctcctcaaagta---taaattatatcaacaaaagaatgc 98
|||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 590 aaaactcgtctgtcagacactctccacaaagtagtataacttatatcaacaaaagaatgc 531
Query: 99 atattaacacaagtaaaactttgtggtaaacaatatccactggtctgtacgtagctgtaa 158
|||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 530 atatcaacacaagtaa--ctttgtgataaacaatatcccctggtctgtacgtagctgtaa 473
Query: 159 ataacgccacttgct 173
|| ||||||| ||||
Sbjct: 472 atgacgccacctgct 458
>gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_13_G11_A012 3', mRNA sequence
Length = 616
Score = 389 bits (196), Expect = e-105
Identities = 319/360 (88%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 363 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 304
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggat 356
||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 303 acgggtggtgaacgggtcgatgcgaacccacagcaaggagaagatcgacgccaacaggat 244
Query: 357 ggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| || |||||||||||||||||||| |||| |||||||| |||||||||||
Sbjct: 243 tgcccagacaaccacgatggtcggggtgcggttttgccgacccatgagacccttgaggaa 184
Query: 417 cgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||| ||| || || |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 183 tgggtacaagtgcacaatcacccagaaggcgaagaagagcttgccaaagagtgggcccca 124
Query: 477 cgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgat 536
|| ||||| ||||||||||| || |||||||| || || || || || |||||||||||
Sbjct: 123 tgattggtaaccgctgttgatcgcataggagataccagcaacaacaccaaccaggttgat 64
Query: 537 gatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgc 596
|||||| ||||| || |||||||||| || || ||||||||||||||||||||||||||
Sbjct: 63 gatcagaatggtcgttggcgggatcaaaagggttgtccacttgaacatgtacagctccgc 4
Score = 168 bits (85), Expect = 2e-039
Identities = 120/130 (92%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 42 aaaactcgtctgtcagccactctcctcaaagta---taaattatatcaacaaaagaatgc 98
||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 572 aaaactcgtctgtcagccactctccacaaagtagtataacttatatcaacaaaagaatgc 513
Query: 99 atattaacacaagtaaaactttgtggtaaacaatatccactggtctgtacgtagctgtaa 158
|||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 512 atatcaacacaagtaa--ctttgtgataaacaatatcccctggtctgtacgtagctgtaa 455
Query: 159 ataacgccac 168
||||||||||
Sbjct: 454 ataacgccac 445
>gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 616
Score = 383 bits (193), Expect = e-104
Identities = 322/365 (88%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 365 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 306
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggat 356
||||||||||| ||||| |||||||||||||||||||||||||| || |||| ||||||
Sbjct: 305 acgggtggtgaacgggtctatgcgaacccacagcaaggagaagattgatgccaacaggat 246
Query: 357 ggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||
Sbjct: 245 tgcccagacaaccacgatggtcggggtgcggttttgccgacccatgagacctttgaggaa 186
Query: 417 cgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||| ||| || || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 185 tgggtacaagtgcacaatcacccagaaggcgaagaagagcttgccaaagagcgggcccca 126
Query: 477 cgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgat 536
|| || || ||||||||||| ||||||||||| || || || || || |||||||||||
Sbjct: 125 tgattgataaccgctgttgatcgcgtaggagataccagcaacaacaccaaccaggttgat 66
Query: 537 gatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgc 596
|||||| ||||| || || |||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 65 gatcagaatggtcgttggtgggatcagaagcgttgtccacttgaacatgtacagctccgc 6
Query: 597 gaagt 601
||||
Sbjct: 5 aaagt 1
Score = 155 bits (78), Expect = 4e-035
Identities = 122/135 (90%), Gaps = 5/135 (3%)
Strand = Plus / Minus
Query: 42 aaaactcgtctgtcagccactctcctcaaagta---taaattatatcaacaaaagaatgc 98
|||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 574 aaaactcgtctgtcagacactctccacaaagtagtataacttatatcaacaaaagaatgc 515
Query: 99 atattaacacaagtaaaactttgtggtaaacaatatccactggtctgtacgtagctgtaa 158
|||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 514 atatcaacacaagtaa--ctttgtgataaacaatatcccctggtctgtacgtagctgtaa 457
Query: 159 ataacgccacttgct 173
|| ||||||| ||||
Sbjct: 456 atgacgccacctgct 442
>gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f112l18, DNA
sequence
Length = 427
Score = 375 bits (189), Expect = e-101
Identities = 368/427 (86%), Gaps = 3/427 (0%)
Strand = Plus / Minus
Query: 307 aaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccagacg 366
||||||||||| | ||||| |||| |||||||||||| |||||||| | || ||||| |
Sbjct: 427 aaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatg 368
Query: 367 acgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacagg 426
|| || ||||| || || | |||||| | |||||||| ||||||||||||||||| |||
Sbjct: 367 acaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtagagg 308
Query: 427 tggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtac 486
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 307 tggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactggtac 248
Query: 487 ccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatg 546
||| |||||||||||| |||||||||||| |||||||||| | ||||||||| || |
Sbjct: 247 ccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttgatgatgagcagc 188
Query: 547 gtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccg 606
|||||||||||||| |||||||| ||||||||||| ||| ||||| ||||| ||| ||
Sbjct: 187 gtggtgggcgggatgaggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcg 128
Query: 607 tcctcgtcc---gaggccttggaggtgacggtgaagttggtgtcgatgccggccagcacc 663
|||||||| | ||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 127 tcctcgtcgccggtggccttggaggtgacggtgaagttggtgtcgatccctgccaggacc 68
Query: 664 ttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaac 723
|||||||||||||| | ||||||||||| ||||| || | ||| ||||| |||||||||
Sbjct: 67 ttgagcaggccctgcacgacggcgaagagatgcgccgacacgccgccgatgacccagaac 8
Query: 724 tgctcgt 730
|||||||
Sbjct: 7 tgctcgt 1
>gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 457
Score = 375 bits (189), Expect = e-101
Identities = 339/389 (87%)
Strand = Plus / Minus
Query: 1057 tccgaaagattgatgggggcagaccccttgaaagctggccgcttgggcatgcagtagatc 1116
|||||||| ||||| || ||||| ||||||| |||||| ||||| ||||||||||||||
Sbjct: 451 tccgaaaggttgataggagcagatcccttgacagctggtcgcttaggcatgcagtagatt 392
Query: 1117 gaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttctgtcacagaaccg 1176
|| ||||||||||| || |||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 391 gatcgccagcctcgagcatgcatcttgaatccagtgagaatatcttctgtaacagaacca 332
Query: 1177 tagatccacccgatctcagttccccattcagtcttgtcctcatagccacagcttataaca 1236
|||||||| ||||||||||||||||| ||||| |||||||||||||||||||| || |||
Sbjct: 331 tagatccatccgatctcagttccccagtcagttttgtcctcatagccacagctgatgaca 272
Query: 1237 tggatagcttctttcagaagagactccggagttgcggactgaggaacaccaccatactcc 1296
|| ||||||||||||||||||||||| |||||||| || || |||||||| ||||| |||
Sbjct: 271 tgaatagcttctttcagaagagactctggagttgcagattgtggaacaccgccatattcc 212
Query: 1297 atcagagtggaggcaacaaacgctgcggactggccaaatctcttctccaggctcatttga 1356
|| || |||||||| ||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 211 ataagggtggaggctacaaaaacactggactggccaaatctcttctccaggctcatttga 152
Query: 1357 gacataagaagtgatttctcgtcgtcaaatccagcgccttcaactccctcctctatatct 1416
||||||| || |||||||| || |||||| || ||||||| || ||||||||||||
Sbjct: 151 gacataatcagcgatttctcatcatcaaattgagaaccttcaatcccttcctctatatct 92
Query: 1417 tcaaggttgaatactggcacagaactgtc 1445
||||| || |||||||| |||||||||||
Sbjct: 91 tcaagattaaatactggtacagaactgtc 63
>gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 359 bits (181), Expect = 1e-096
Identities = 459/551 (83%), Gaps = 3/551 (0%)
Strand = Plus / Minus
Query: 334 gagaagatggacgccagcaggatggcccagacgacgacgatggtcggggtgcggttctgc 393
||||||||||| || || ||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 567 gagaagatggaggcgaggaggatggaccagagcacgacgatggtgggcgtccggttctgc 508
Query: 394 ctgcccatgaggcccttgaggaacgggtacaggtggacgatgacccagaaggcgaagaag 453
|| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 507 ctccccatcaggcccttgaggaacgggtacaggtggacgatgacccagaaggagaagaag 448
Query: 454 agcttgccgaagagcgggccccacgactggtacccgctgttgatggcgtaggagatgccg 513
||||||||||| ||||| |||||||| ||||||| |||||| ||||| ||||| ||
Sbjct: 447 agcttgccgaacagcggcccccacgagccgtacccgttgttgacggcgtcggagaccccc 388
Query: 514 gcgacgacgccgaccaggttgatgatcaggatggtggtgggcgggatcaggagcgtcgtc 573
|| |||| ||| |||| ||||||||| | || || || || || | ||| |||||||||
Sbjct: 387 gccacgatgcccaccatgttgatgatgatgagcgtcgtcgggggcaccagcagcgtcgtc 328
Query: 574 cacttgaacatgtacagctccgcgaa---gtcgccgtcctcgtccgaggccttggaggtg 630
|||||||| | ||| |||||| |||| ||| | || ||| | | ||||||||||||
Sbjct: 327 cacttgaagaggtagagctccccgaacgcgtccgcctcgtcgccggccgccttggaggtg 268
Query: 631 acggtgaagttggtgtcgatgccggccagcaccttgagcaggccctggaacacggcgaag 690
||||||||| ||||||| | |||| ||||||||||||| | ||||||||||||||||||
Sbjct: 267 acggtgaagctggtgtccacgccgcccagcaccttgaggaagccctggaacacggcgaac 208
Query: 691 aggtgcgcggagatgcccccgatcacccagaactgctcgttcctccaccactcgtcgatg 750
|||||||| || | ||| ||||||||||||||||||||||||| |||||| || ||||||
Sbjct: 207 aggtgcgccgacacgccgccgatcacccagaactgctcgttccgccaccagtcctcgatg 148
Query: 751 cccaccccgctccacctcatctccaggatgcccgtggcgaagatcgagatgaagagggag 810
| |||||||||||||| || |||||| | || ||| |||| ||| || | ||| || | |
Sbjct: 147 ctcaccccgctccaccgcagctccagcacgctcgtcgcgatgatggacaggaacagcgcg 88
Query: 811 atgaaccagatgctggcgaagttgctgatctctggaatgatgaactttccggtgagcaga 870
|||||||||||||| || | |||| | | | |||||||||||||| |||||||||||
Sbjct: 87 atgaaccagatgctcgcaaggttgttcagcgtgggaatgatgaacttgccggtgagcagg 28
Query: 871 cagatggcggg 881
|||| ||||||
Sbjct: 27 cagacggcggg 17
>gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10434936, DNA sequence
Length = 549
Score = 355 bits (179), Expect = 2e-095
Identities = 191/195 (97%)
Strand = Plus / Plus
Query: 3271 cccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgc 3330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgc 251
Query: 3331 tcgtactcgtagcaggggcggcacaccggaaacccgcagacgtcgcaggcggcgaagacg 3390
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 252 tcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacg 311
Query: 3391 tccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgtccgccaccg 3450
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 312 tccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccg 371
Query: 3451 cgcctccccgacttc 3465
|||||||||||||||
Sbjct: 372 cgcctccccgacttc 386
Score = 85.7 bits (43), Expect = 3e-014
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 3465 cacgccgtccgcgtcgccctccatggcaagcgagctcgccgagaaacgtcgagggagct 3523
|||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||
Sbjct: 488 cacgccgtccgcgtcgccctccatggcaggcgagctcgccaagaaccgacgagggagct 546
>gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f039j12, DNA
sequence
Length = 726
Score = 355 bits (179), Expect = 2e-095
Identities = 191/195 (97%)
Strand = Plus / Minus
Query: 3271 cccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgc 3330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgc 281
Query: 3331 tcgtactcgtagcaggggcggcacaccggaaacccgcagacgtcgcaggcggcgaagacg 3390
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 280 tcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacg 221
Query: 3391 tccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgtccgccaccg 3450
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 220 tccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccg 161
Query: 3451 cgcctccccgacttc 3465
|||||||||||||||
Sbjct: 160 cgcctccccgacttc 146
Score = 71.9 bits (36), Expect = 4e-010
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 3465 cacgccgtccgcgtcgccctccatggcaagcgagctcgcc 3504
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 44 cacgccgtccgcgtcgccctccatggcaggcgagctcgcc 5
>gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_F06_A007 3', mRNA sequence
Length = 579
Score = 345 bits (174), Expect = 2e-092
Identities = 287/325 (88%)
Strand = Plus / Minus
Query: 237 tacaaaccttccacttccctagcagttgatgccacacgtctgggtatccgggccagtgac 296
|||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 325 tacaaaccttccactttcctagcagttgatgccacatgtttgagtatctgggccagtgac 266
Query: 297 gcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggat 356
||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 265 acgggtggtgaacgggtcgatgcgaacccacagcaaggagaagatcgacgccnacaggat 206
Query: 357 ggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| || |||||||||||||||||||| |||| |||||||| |||||||||||
Sbjct: 205 tgcccagacaaccacgatggtcggggtgcggttttgccgacccatgagacccttgaggaa 146
Query: 417 cgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||| ||| || || |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 145 tgggtacaagtgcacaatcacccagaaggcgaagaagagcttgccaaagagtgggcccca 86
Query: 477 cgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgat 536
|| ||||| ||||||||||| || |||||||| || || || || || |||||||||||
Sbjct: 85 tgattggtaaccgctgttgatcgcataggagataccagcaacaacaccaaccaggttgat 26
Query: 537 gatcaggatggtggtgggcgggatc 561
|||||| ||||| || |||||||||
Sbjct: 25 gatcagaatggtcgttggcgggatc 1
Score = 161 bits (81), Expect = 6e-037
Identities = 119/130 (91%), Gaps = 5/130 (3%)
Strand = Plus / Minus
Query: 42 aaaactcgtctgtcagccactctcctcaaagta---taaattatatcaacaaaagaatgc 98
||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 534 aaaactcgtatgtcagccactctccacaaagtagtataacttatatcaacaaaagaatgc 475
Query: 99 atattaacacaagtaaaactttgtggtaaacaatatccactggtctgtacgtagctgtaa 158
|||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 474 atatcaacacaagtaa--ctttgtgataaacaatatcccctggtctgtacgtagctgtaa 417
Query: 159 ataacgccac 168
||||||||||
Sbjct: 416 ataacgccac 407
>gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10940114, DNA
sequence
Length = 564
Score = 319 bits (161), Expect = 1e-084
Identities = 194/205 (94%)
Strand = Plus / Minus
Query: 1191 ctcagttccccattcagtcttgtcctcatagccacagcttataacatggatagcttcttt 1250
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 454 ctcagttccccattcagtcttgtcctcatagccacaacttataacatggatagcttcttt 395
Query: 1251 cagaagagactccggagttgcggactgaggaacaccaccatactccatcagagtggaggc 1310
||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 394 cagaagagattccggagttgcagactgaggaacaccaccatattccatcagagtggaggc 335
Query: 1311 aacaaacgctgcggactggccaaatctcttctccaggctcatttgagacataagaagtga 1370
|||||| ||||| || || |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 334 aacaaaagctgcagattgaccaaatctcttctccaagctcatttgagacataagaagtga 275
Query: 1371 tttctcgtcgtcaaatccagcgcct 1395
|||||| || |||||||||||||||
Sbjct: 274 tttctcatcatcaaatccagcgcct 250
Score = 139 bits (70), Expect = 2e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 1393 ccttcaactccctcctctatatcttcaaggttgaatactggcacagaactgtccacatgc 1452
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 116 ccttcaactccctcctctatatcttcgagattgaatactggcacagaactgtccacatgc 57
Query: 1453 ttctgcgacttcttcttgtccgagcc---cttctttgatttgcttgccttcttcct 1505
||||| ||||| |||||||| ||||| ||||| ||||||| ||| |||||||||
Sbjct: 56 ttctgtgactttttcttgtctgagcccctcttctctgatttgtttgtcttcttcct 1
>gb|BI074863.1|BI074863 IP1_16_A11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 497
Score = 307 bits (155), Expect = 4e-081
Identities = 400/481 (83%), Gaps = 3/481 (0%)
Strand = Plus / Minus
Query: 404 ggcccttgaggaacgggtacaggtggacgatgacccagaaggcgaagaagagcttgccga 463
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 497 ggcccttgaggaacgggtacaggtggacgatgacccagaaggagaagaagagcttgccga 438
Query: 464 agagcgggccccacgactggtacccgctgttgatggcgtaggagatgccggcgacgacgc 523
| ||||| |||||||| ||||||| |||||| ||||| ||||| || || |||| ||
Sbjct: 437 acagcggcccccacgagccgtacccgttgttgacggcgtcggagacccccgccacgatgc 378
Query: 524 cgaccaggttgatgatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaaca 583
| |||| ||||||||| | || || || || || | ||| ||||||||||||||||| |
Sbjct: 377 ccaccatgttgatgatgatgagcgtcgtcgggggcaccagcagcgtcgtccacttgaaga 318
Query: 584 tgtacagctccgcgaagtcgccgtcctcgtccgaggcc---ttggaggtgacggtgaagt 640
||| |||||| |||| || | ||||||| |||| ||||||||||||||||||
Sbjct: 317 ggtagagctccccgaacgcgtccgcctcgtcgccggccgccttggaggtgacggtgaagc 258
Query: 641 tggtgtcgatgccggccagcaccttgagcaggccctggaacacggcgaagaggtgcgcgg 700
||||||| | |||| ||||||||||||| | |||||||||||||||||| |||||||| |
Sbjct: 257 tggtgtccacgccgcccagcaccttgaggaagccctggaacacggcgaacaggtgcgccg 198
Query: 701 agatgcccccgatcacccagaactgctcgttcctccaccactcgtcgatgcccaccccgc 760
| | ||| ||||||||||||||||||||||||| |||||| || ||||||| ||||||||
Sbjct: 197 acacgccgccgatcacccagaactgctcgttccgccaccagtcctcgatgctcaccccgc 138
Query: 761 tccacctcatctccaggatgcccgtggcgaagatcgagatgaagagggagatgaaccaga 820
|||||| || |||||| | || ||| |||| ||| || | ||| || | |||||||||||
Sbjct: 137 tccaccgcagctccagcacgctcgtcgcgatgatggacaggaacagcgcgatgaaccaga 78
Query: 821 tgctggcgaagttgctgatctctggaatgatgaactttccggtgagcagacagatggcgg 880
|||| || | |||| | | | |||||||||||||| ||||||||||| |||| |||||
Sbjct: 77 tgctcgcaaggttgttcagcgtgggaatgatgaacttgccggtgagcaggcagacggcgg 18
Query: 881 g 881
|
Sbjct: 17 g 17
>gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_34_G09_A002 5', mRNA sequence
Length = 848
Score = 305 bits (154), Expect = 2e-080
Identities = 561/697 (80%)
Strand = Plus / Minus
Query: 1831 ccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttgtga 1890
||||| || |||||||| || ||||||| || |||||||| |||||||| |||||||||
Sbjct: 707 ccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagccttcttgtga 648
Query: 1891 tgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattgccc 1950
|||||||| || || | |||||||||||| |||||||| | ||| |||| ||||| ||
Sbjct: 647 tgctggaagcctggtctcttttcacgagagacatagacaagacgcggtaattcatttcca 588
Query: 1951 tcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtcccng 2010
||||| ||||| ||||||||||| || | ||| ||||||||||| |||||||||||||
Sbjct: 587 tcagtgtcaagaccaccactgtgccccaagaacacctgaatcatgccaggatggtcccta 528
Query: 2011 gtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttc 2070
| ||| || || ||||| | || ||||| |||| |||| || || ||||| ||||||
Sbjct: 527 ggattattcccaggccaagcagttccatcagccatggtccacccctcttcaggcactttc 468
Query: 2071 tgtgccttagcaacaaggccatttaccctaactttgaattcttcatattctctcttcatg 2130
||||| || ||||||||| |||| | || ||||||||||||||||| |||||||||||
Sbjct: 467 tgtgctttggcaacaagggcattgattcttactttgaattcttcatactctctcttcatt 408
Query: 2131 gcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgg 2190
|| || | || |||||||||||||| || | ||||||||||| |||||| ||||| ||
Sbjct: 407 gctcgtctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttga 348
Query: 2191 gagaagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggtacccat 2250
| ||||| |||| |||||||| |||||||| |||| ||||||| ||| || |||||
Sbjct: 347 gcaaagtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccac 288
Query: 2251 tttctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatcgcagctccatca 2310
||||||||||| |||| || || | || | |||||||||||||| || | ||||||
Sbjct: 287 tttctagcaaattctgcggtttctgagagagactcaaatgtcagcatagctgaaccatca 228
Query: 2311 tcagatacatagcaagagaccttatccacagggtaatccacagcaagaatggatagcacg 2370
||||| |||||||| || || || || |||||||||||||||||||||||||| | ||
Sbjct: 227 tcagaaacatagcatgacactttgtcgacagggtaatccacagcaagaatggacaaaaca 168
Query: 2371 gtattggcagtgacaagaggaggctccttcattgggtcgactgtactgacgaaaatgtca 2430
|| ||||| |||| || ||||| ||||||| ||| || |||||||||||||| | |||
Sbjct: 167 gtgttggccgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatca 108
Query: 2431 acagcagccaactgagatggctcaccttcccggtcataccttaatgccagcctatcaagg 2490
| | ||||| ||| || ||||| || || | |||||||| ||||| ||||| |||||
Sbjct: 107 atgggagccagctgtgacggctctccctctctatcatacctcaatgcaagcctgtcaaga 48
Query: 2491 tacgtctcccggttgattggaaaccacttagggaact 2527
|| ||||| |||||||||||| |||| || |||||||
Sbjct: 47 tatgtctcacggttgattggataccattttgggaact 11
>gb|BE357401.1|BE357401 DG1_15_D04.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 552
Score = 285 bits (144), Expect = 1e-074
Identities = 442/539 (82%), Gaps = 3/539 (0%)
Strand = Plus / Minus
Query: 682 acggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccaccac 741
||||||||||| ||||| || | ||| ||||| |||||||||||||||||||||||||||
Sbjct: 543 acggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctccaccac 484
Query: 742 tcgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcgagatg 801
|| ||||||| |||||||||||||| |||||||||||||||||| |||||||| || |||
Sbjct: 483 tcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatggacatg 424
Query: 802 aagagggagatgaaccagatgctggcgaagttgctgatctctggaatgatgaactttccg 861
||||| | |||||| | | ||||||||| |||| ||| || ||||||||||| |||
Sbjct: 423 aagagcgcgatgaagaacaagctggcgaacgtgctaatcgacggcatgatgaacttgccg 364
Query: 862 gtgagcagacagatggcgggcaggatgcagtagatgagaagcgggatggacgtgagcggg 921
||||| || || | |||||| ||| | |||||| ||| ||||||| || |||| |||
Sbjct: 363 gtgaggaggcatacggcggggagggtacagtaggcgagcagcgggagcgaggtgaaaggg 304
Query: 922 tagatggtggtgttgatgtacgcgaatctctccaggaacttga-gccgccctcc--gtag 978
|||||||||||||||||||| ||||| | |||||| |||||| | ||| | | ||||
Sbjct: 303 tagatggtggtgttgatgtaggcgaagcgctccagccacttgaggttgccgttcttgtag 244
Query: 979 ccgtaccacagggggcagtgccggctgaagaggatctccacggacccaagagcccaccgg 1038
|||||| ||| |||| ||| |||||||||| |||||| |||||||| || |||||||||
Sbjct: 243 ccgtacagcagcgggctgtggcggctgaagaagatctcgacggaccccagcgcccaccgg 184
Query: 1039 agcacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgc 1098
||||||||||| |||||||| || ||||||||||| || ||||||||||| || | ||||
Sbjct: 183 agcacctggttgagacggtcggatagattgatgggcgccgaccccttgaacgccgcccgc 124
Query: 1099 ttgggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatg 1158
|| ||||||||||| | || ||||| || || |||||||||||| || || || |||
Sbjct: 123 ttcggcatgcagtacacggagcgccacccgcggcagtgcatcttgaaccccgtcaggatg 64
Query: 1159 tcttctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctc 1217
|| || || | || |||||||||||||| | ||| |||||| || |||||||||||
Sbjct: 63 tcctccgtgatcgacccgtagatccacccaagctccagtccccagtcggtcttgtcctc 5
>gb|BI245956.1|BI245956 IP1_65_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 495
Score = 281 bits (142), Expect = 2e-073
Identities = 352/422 (83%)
Strand = Plus / Minus
Query: 627 ggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctggaacacggc 686
||||||||||||| ||||||| | |||| ||||||||||||| | |||||||||||||||
Sbjct: 436 ggtgacggtgaagctggtgtccacgccgcccagcaccttgaggaagccctggaacacggc 377
Query: 687 gaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccaccactcgtc 746
||| |||||||| || | ||| ||||||||||||||||||||||||| |||||| || ||
Sbjct: 376 gaacaggtgcgccgacacgccgccgatcacccagaactgctcgttccgccaccagtcctc 317
Query: 747 gatgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcgagatgaagag 806
||||| |||||||||||||| || |||||| | || ||| |||| ||| || | ||| ||
Sbjct: 316 gatgctcaccccgctccaccgcagctccagcacgctcgtcgcgatgatggacaggaacag 257
Query: 807 ggagatgaaccagatgctggcgaagttgctgatctctggaatgatgaactttccggtgag 866
| ||||||||||||||| || | |||| | | | |||||||||||||| ||||||||
Sbjct: 256 cgcgatgaaccagatgctcgcaaggttgttcagcgtgggaatgatgaacttgccggtgag 197
Query: 867 cagacagatggcgggcaggatgcagtagatgagaagcgggatggacgtgagcgggtagat 926
||| |||| |||||| | | |||||||| ||| ||||||||||| |||| |||||||
Sbjct: 196 caggcagacggcggggatggtgcagtaggcgagcagcgggatggaggtgaaggggtagac 137
Query: 927 ggtggtgttgatgtacgcgaatctctccaggaacttgagccgccctccgtagccgtacca 986
| |||||||| |||| ||||| | |||||| ||||||||||||| |||||| |||||||
Sbjct: 136 gatggtgttggtgtaggcgaagcgctccagccacttgagccgcccgccgtaggcgtacca 77
Query: 987 cagggggcagtgccggctgaagaggatctccacggacccaagagcccaccggagcacctg 1046
|| |||||||| ||||| | || ||||||||| ||||| || ||||| || ||||||||
Sbjct: 76 gagcgggcagtggcggctcatgaagatctccaccgaccccagcgcccaacgcagcacctg 17
Query: 1047 gt 1048
||
Sbjct: 16 gt 15
>gb|BI141114.1|BI141114 IP1_43_D01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 412
Score = 278 bits (140), Expect = 4e-072
Identities = 296/348 (85%)
Strand = Plus / Minus
Query: 618 ggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctg 677
||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct: 412 ggccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctg 353
Query: 678 gaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctcca 737
| ||||||||||| ||||| || | ||| ||||| |||||||||||||||||||||||
Sbjct: 352 cacgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctcca 293
Query: 738 ccactcgtcgatgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcga 797
|||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||| ||
Sbjct: 292 ccactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatgga 233
Query: 798 gatgaagagggagatgaaccagatgctggcgaagttgctgatctctggaatgatgaactt 857
|||||||| | |||||| | | ||||||||| |||| ||| || |||||||||||
Sbjct: 232 catgaagagcgcgatgaagaacaagctggcgaacgtgctaatcgacggcatgatgaactt 173
Query: 858 tccggtgagcagacagatggcgggcaggatgcagtagatgagaagcgggatggacgtgag 917
|||||||| || || | |||||| ||| | |||||| ||| ||||||| || ||||
Sbjct: 172 gccggtgaggaggcatacggcggggagggtacagtaggcgagcagcgggagcgaggtgaa 113
Query: 918 cgggtagatggtggtgttgatgtacgcgaatctctccaggaacttgag 965
||||||||||||||||||||||| ||||| | |||||| |||||||
Sbjct: 112 agggtagatggtggtgttgatgtaggcgaagcgctccagccacttgag 65
>gb|BG241798.1|BG241798 RHIZ2_50_D01.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 222
Score = 276 bits (139), Expect = 1e-071
Identities = 175/187 (93%)
Strand = Plus / Minus
Query: 3039 gactgatgggatgtatccccgaggaatctcgccactgtcatacttggtaagcccgatctc 3098
|||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||
Sbjct: 222 gactgacgggatgtatcccccagggatctcaccactgtcatacttggtaagcccgatctc 163
Query: 3099 gccactgtcatacttggggcgaccaacatccccgctgcccccaacgttcatgcgccagct 3158
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 162 gccactgtcatacttggggcggccaacatccccgctgcccccagcgttcatgcgccagct 103
Query: 3159 gcgcattctgtcggcaatcttctgcttctggtcctcattgccagatgcaaggtaattgaa 3218
|||||| ||||| |||||||||||||||||||| || |||||||||||| |||| |||||
Sbjct: 102 gcgcatcctgtcagcaatcttctgcttctggtcatcgttgccagatgcagggtagttgaa 43
Query: 3219 gtcgcta 3225
|||||||
Sbjct: 42 gtcgcta 36
>gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141932, DNA
sequence
Length = 621
Score = 266 bits (134), Expect = 1e-068
Identities = 422/518 (81%)
Strand = Plus / Plus
Query: 289 ccagtgacgcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgcc 348
|||||||| ||||||||||| || ||||| ||||||||||||| ||| || || || ||
Sbjct: 66 ccagtgacccgggtggtgaatggatcgatacgaacccacagcagggaaaatatcgatgca 125
Query: 349 agcaggatggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggccc 408
|| ||| | ||||| || | || |||||||| |||||||||||| | ||||||||||||
Sbjct: 126 aggagggtagcccatacaagaacaatggtcggcgtgcggttctgcttccccatgaggccc 185
Query: 409 ttgaggaacgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagc 468
|||||||| ||||||| |||||| || |||||||| |||||||||||||| || || ||
Sbjct: 186 ttgaggaaggggtacaagtggacaatcacccagaacgcgaagaagagcttcccaaaaaga 245
Query: 469 gggccccacgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgacc 528
|| ||||| |||||||| || || ||||| || ||||| |||| || || || |||| |
Sbjct: 246 ggcccccatgactggtaaccactattgatcgcataggaagtgccagcaaccacaccgatc 305
Query: 529 aggttgatgatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtac 588
|||||||| |||| || ||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 306 aggttgataatcaaaatagtggttggtgggatcagaagcgttgtccacttgaacatgtag 365
Query: 589 agctccgcgaagtcgccgtcctcgtccgaggccttggaggtgacggtgaagttggtgtcg 648
||||| || || || || || || || | |||||| |||||||| |||||| | |||||
Sbjct: 366 agctcggcaaaatcaccttcttcatcagtggccttagaggtgacagtgaagctcgtgtca 425
Query: 649 atgccggccagcaccttgagcaggccctggaacacggcgaagaggtgcgcggagatgccc 708
|| || || |||||||| || || |||||||| ||||| || | ||||| || || ||
Sbjct: 426 ataccagcaagcacctttaggagaccctggaagacggcaaataaatgcgcagaaatacca 485
Query: 709 ccgatcacccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctc 768
|| || ||||| |||||||||||||||||||| || || ||||| || || |||||||||
Sbjct: 486 ccaataacccaaaactgctcgttcctccaccattcatcaatgccaacaccactccacctc 545
Query: 769 atctccaggatgcccgtggcgaagatcgagatgaagag 806
||||| ||||| || ||||| ||||||||||| |||||
Sbjct: 546 atctcaaggataccagtggcaaagatcgagataaagag 583
>gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_2_G12_A002 3', mRNA sequence
Length = 743
Score = 266 bits (134), Expect = 1e-068
Identities = 422/518 (81%)
Strand = Plus / Minus
Query: 289 ccagtgacgcgggtggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgcc 348
|||||||| ||||||||||| || ||||| ||||||||||||| ||| || || || ||
Sbjct: 532 ccagtgacccgggtggtgaatggatcgatacgaacccacagcagggaaaatatcgatgca 473
Query: 349 agcaggatggcccagacgacgacgatggtcggggtgcggttctgcctgcccatgaggccc 408
|| ||| | ||||| || | || |||||||| |||||||||||| | ||||||||||||
Sbjct: 472 aggagggtagcccatacaagaacaatggtcggcgtgcggttctgcttccccatgaggccc 413
Query: 409 ttgaggaacgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagc 468
|||||||| ||||||| |||||| || |||||||| |||||||||||||| || || ||
Sbjct: 412 ttgaggaaggggtacaagtggacaatcacccagaacgcgaagaagagcttcccaaaaaga 353
Query: 469 gggccccacgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgacc 528
|| ||||| |||||||| || || ||||| || ||||| |||| || || || |||| |
Sbjct: 352 ggcccccatgactggtaaccactattgatcgcataggaagtgccagcaaccacaccgatc 293
Query: 529 aggttgatgatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtac 588
|||||||| |||| || ||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 292 aggttgataatcaaaatagtggttggtgggatcagaagcgttgtccacttgaacatgtag 233
Query: 589 agctccgcgaagtcgccgtcctcgtccgaggccttggaggtgacggtgaagttggtgtcg 648
||||| || || || || || || || | |||||| |||||||| |||||| | |||||
Sbjct: 232 agctcggcaaaatcaccttcttcatcagtggccttagaggtgacagtgaagctcgtgtca 173
Query: 649 atgccggccagcaccttgagcaggccctggaacacggcgaagaggtgcgcggagatgccc 708
|| || || |||||||| || || |||||||| ||||| || | ||||| || || ||
Sbjct: 172 ataccagcaagcacctttaggagaccctggaagacggcaaataaatgcgcagaaatacca 113
Query: 709 ccgatcacccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctc 768
|| || ||||| |||||||||||||||||||| || || ||||| || || |||||||||
Sbjct: 112 ccaataacccaaaactgctcgttcctccaccattcatcaatgccaacaccactccacctc 53
Query: 769 atctccaggatgcccgtggcgaagatcgagatgaagag 806
||||| ||||| || ||||| ||||||||||| |||||
Sbjct: 52 atctcaaggataccagtggcaaagatcgagataaagag 15
>gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_C04_A002 3', mRNA sequence
Length = 553
Score = 260 bits (131), Expect = 9e-067
Identities = 267/311 (85%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 305 tgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggcccaga 364
||||||||||||| | ||||| |||| |||||||||||| |||||||| | || |||||
Sbjct: 326 tgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccaga 267
Query: 365 cgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtaca 424
||| || ||||| || || | |||||| | |||||||| ||||||||||||||||| |
Sbjct: 266 agacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtaga 207
Query: 425 ggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggt 484
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 206 ggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactggt 147
Query: 485 acccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcagga 544
|| || |||||||||||| |||||||||||| |||||||||| | ||||||||| || |
Sbjct: 146 acacgttgttgatggcgtcggagatgccggccacgacgccgatgatgttgatgatgagca 87
Query: 545 tggtggtgggcgggat-caggagcgtcgtccacttgaacatgtacagctccgcgaagtcg 603
|||||||||||||| |||||||| ||||||||||| ||| ||||| ||||| |||
Sbjct: 86 gcgtggtgggcgggatgaaggagcgtggtccacttgaatgcgtagagctcggcgaactcg 27
Query: 604 ccgtcctcgtc 614
||||||||||
Sbjct: 26 tcgtcctcgtc 16
>gb|CW315969.1|CW315969 104_807_11472644_148_35845_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472644, DNA
sequence
Length = 726
Score = 258 bits (130), Expect = 3e-066
Identities = 237/272 (87%), Gaps = 3/272 (1%)
Strand = Plus / Minus
Query: 547 gtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccg 606
|||||||||||||| |||||||| |||||||||| ||| ||||| ||||| ||| ||
Sbjct: 699 gtggtgggcgggatgaggagcgtgttccacttgaatgcgtagagctcggcgaactcgtcg 640
Query: 607 tcctcgtcc---gaggccttggaggtgacggtgaagttggtgtcgatgccggccagcacc 663
|||||||| | ||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 639 tcctcgtcgccggtggccttggaggtgacggtgaagttggtgtcgatccctgccaggacc 580
Query: 664 ttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaac 723
|||||||||||||| | ||||||||||| ||||| || | ||| ||||| |||||||||
Sbjct: 579 ttgagcaggccctgcacgacggcgaagagatgcgccgacacgccgccgatgacccagaac 520
Query: 724 tgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgccc 783
|||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||
Sbjct: 519 tgctcgttcctccaccactcctcgatgctcaccccgctccaccgcatctccaggatgccc 460
Query: 784 gtggcgaagatcgagatgaagagggagatgaa 815
|| |||||||| || |||||||| | ||||||
Sbjct: 459 gtcgcgaagatggacatgaagagcgcgatgaa 428
Score = 155 bits (78), Expect = 4e-035
Identities = 223/269 (82%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 847 atgatgaactttccggtgagcagacagatggcgggcaggatgcagtagatgagaagcggg 906
||||||||||| |||||||| || || | |||||| ||| | |||||| ||| ||||||
Sbjct: 294 atgatgaacttgccggtgaggaggcatacggcggggagggtacagtaggcgagcagcggg 235
Query: 907 atggacgtgagcgggtagatggtggtgttgatgtacgcgaatctctccaggaacttgagc 966
| || |||| ||||||||||||||||||||||| ||||| | |||||| |||||||
Sbjct: 234 agcgaggtgaaagggtagatggtggtgttgatgtaggcgaagcgctccagccacttgagg 175
Query: 967 c-gccctcc--gtagccgtaccacagggggcagtgccggctgaagaggatctccacggac 1023
||| | | |||||||||| ||| |||| ||| |||||||||| |||||| ||||||
Sbjct: 174 ttgccgttcttgtagccgtacagcagcgggctgtggcggctgaagaagatctcgacggac 115
Query: 1024 ccaagagcccaccggagcacctggttcagacggtccgaaagattgatgggggcagacccc 1083
|| || |||||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 114 cccagcgcccaccggagcacctggttgagacggtcggatagattgatgggcgccgacccc 55
Query: 1084 ttgaaagctggccgcttgggcatgcagta 1112
||||| || | |||||| |||||||||||
Sbjct: 54 ttgaacgccgcccgcttcggcatgcagta 26
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,038,390
Number of Sequences: 832831
Number of extensions: 1038390
Number of successful extensions: 312268
Number of sequences better than 0.5: 297
Number of HSP's better than 0.5 without gapping: 293
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 311339
Number of HSP's gapped (non-prelim): 751
length of query: 3807
length of database: 491,359,669
effective HSP length: 21
effective length of query: 3786
effective length of database: 473,870,218
effective search space: 1794072645348
effective search space used: 1794072645348
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)