BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230358.2.1
(2136 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA738547.1|AA738547 SbRLK5 Sorghum bicolor cv. TX430 lea... 971 0.0
gb|BM325664.1|BM325664 PIC1_47_C09.b1_A002 Pathogen-infecte... 959 0.0
gb|BE598826.1|BE598826 PI1_83_G03.b1_A002 Pathogen induced ... 872 0.0
gb|BE599188.1|BE599188 PI1_86_D11.b1_A002 Pathogen induced ... 870 0.0
gb|BE599023.1|BE599023 PI1_86_D11.g1_A002 Pathogen induced ... 854 0.0
gb|BM324174.1|BM324174 PIC1_25_A08.b1_A002 Pathogen-infecte... 823 0.0
gb|BE600711.1|BE600711 PI1_91_F12.b1_A002 Pathogen induced ... 813 0.0
gb|BM322546.1|BM322546 PIC1_6_B09.b1_A002 Pathogen-infected... 797 0.0
gb|BE364036.1|BE364036 PI1_11_B09.b1_A002 Pathogen induced ... 769 0.0
gb|BE364131.1|BE364131 PI1_11_B09.g1_A002 Pathogen induced ... 710 0.0
gb|BG047834.1|BG047834 OV1_28_D04.b1_A002 Ovary 1 (OV1) Sor... 710 0.0
gb|BE598205.1|BE598205 PI1_66_H12.b1_A002 Pathogen induced ... 676 0.0
gb|BE366607.1|BE366607 PI1_35_G02.g1_A002 Pathogen induced ... 618 e-175
gb|BE594637.1|BE594637 PI1_35_G02.b1_A002 Pathogen induced ... 618 e-175
gb|BE598493.1|BE598493 PI1_83_G12.g1_A002 Pathogen induced ... 618 e-175
gb|BE598817.1|BE598817 PI1_83_G12.b1_A002 Pathogen induced ... 618 e-175
gb|BG048156.1|BG048156 OV1_28_D04.g1_A002 Ovary 1 (OV1) Sor... 611 e-172
gb|BE601334.1|BE601334 PI1_91_F12.g1_A002 Pathogen induced ... 535 e-150
gb|BE598502.1|BE598502 PI1_83_G03.g1_A002 Pathogen induced ... 511 e-143
gb|BE597915.1|BE597915 PI1_66_H12.g1_A002 Pathogen induced ... 500 e-139
gb|BM331493.1|BM331493 PIC1_72_A02.g1_A002 Pathogen-infecte... 490 e-136
gb|BG273210.1|BG273210 OV2_28_C05.g1_A002 Ovary 2 (OV2) Sor... 462 e-128
gb|BM330111.1|BM330111 PIC1_47_C09.g1_A002 Pathogen-infecte... 446 e-123
gb|BM328664.1|BM328664 PIC1_25_A08.g1_A002 Pathogen-infecte... 444 e-122
gb|BM327028.1|BM327028 PIC1_6_B09.g1_A002 Pathogen-infected... 428 e-118
gb|BE356037.1|BE356037 DG1_121_D02.g1_A002 Dark Grown 1 (DG... 385 e-104
gb|CD425978.1|CD425978 SA1_15_E03.g1_A002 Salicylic acid-tr... 254 3e-065
gb|CL177097.1|CL177097 104_384_10893597_116_31916_045 Sorgh... 242 1e-061
gb|CN138649.1|CN138649 OX1_13_C09.b1_A002 Oxidatively-stres... 232 1e-058
gb|CW447061.1|CW447061 fsbb001f179p17f0 Sorghum methylation... 230 4e-058
gb|AW922578.1|AW922578 DG1_45_F03.g1_A002 Dark Grown 1 (DG1... 200 4e-049
gb|CL177098.1|CL177098 104_384_10893597_148_31915_045 Sorgh... 196 6e-048
gb|BM326208.1|BM326208 PIC1_72_A02.b1_A002 Pathogen-infecte... 188 1e-045
gb|BZ338087.1|BZ338087 ia92h08.g1 WGS-SbicolorF (JM107 adap... 125 2e-026
gb|CD425877.1|CD425877 SA1_15_E03.b1_A002 Salicylic acid-tr... 125 2e-026
gb|CD425568.1|CD425568 SA1_13_E03.b1_A002 Salicylic acid-tr... 117 4e-024
gb|CL172317.1|CL172317 104_374_10890057_148_31774_345 Sorgh... 115 2e-023
gb|BG273646.1|BG273646 OV2_28_C05.b1_A002 Ovary 2 (OV2) Sor... 113 7e-023
gb|CW021178.1|CW021178 104_109_10409392_114_30490 Sorghum m... 109 1e-021
gb|CW148630.1|CW148630 104_547_11142056_116_35013_026 Sorgh... 105 2e-020
gb|CW047861.1|CW047861 104_285_10512917_114_30216 Sorghum m... 101 3e-019
gb|CF487114.1|CF487114 POL1_41_G11.g1_A002 Pollen Sorghum b... 88 4e-015
gb|CN138729.1|CN138729 OX1_13_C09.g1_A002 Oxidatively-stres... 88 4e-015
gb|BE366221.1|BE366221 PI1_31_B07.b2_A002 Pathogen induced ... 84 6e-014
gb|CD425663.1|CD425663 SA1_13_E03.g1_A002 Salicylic acid-tr... 82 2e-013
gb|CW100957.1|CW100957 104_468_11004380_148_34395_072 Sorgh... 68 4e-009
gb|CW444977.1|CW444977 fsbb001f166n12k0 Sorghum methylation... 66 1e-008
gb|CW242649.1|CW242649 104_702_11219456_148_37565_026 Sorgh... 64 6e-008
gb|CW292550.1|CW292550 104_772_11414147_148_35583_038 Sorgh... 64 6e-008
gb|CW364297.1|CW364297 fsbb001f036e13k0 Sorghum methylation... 64 6e-008
gb|CW364343.1|CW364343 fsbb001f036f13k0 Sorghum methylation... 64 6e-008
gb|CW449176.1|CW449176 fsbb001f183d05f0 Sorghum methylation... 64 6e-008
gb|CW449177.1|CW449177 fsbb001f183d05k0 Sorghum methylation... 64 6e-008
gb|BG047963.1|BG047963 OV1_26_A01.g1_A002 Ovary 1 (OV1) Sor... 64 6e-008
gb|CW047862.1|CW047862 104_285_10512917_115_30217 Sorghum m... 60 9e-007
gb|CF761097.1|CF761097 DSAF1_71_A09.b1_A011 Drought-stresse... 60 9e-007
gb|BG649209.1|BG649209 EM1_78_C12.g1_A002 Embryo 1 (EM1) So... 44 0.053
gb|CD204459.1|CD204459 HS1_8_B12.b1_A012 Heat-shocked seedl... 44 0.053
gb|BG465120.1|BG465120 EM1_33_F03.b1_A002 Embryo 1 (EM1) So... 42 0.21
>gb|AA738547.1|AA738547 SbRLK5 Sorghum bicolor cv. TX430 leaf Sorghum bicolor cDNA clone
SbRLK5 similar to protein kinase, highest similarity to
receptor-like protein kinases, mRNA sequence
Length = 656
Score = 971 bits (490), Expect = 0.0
Identities = 615/656 (93%), Gaps = 3/656 (0%)
Strand = Plus / Minus
Query: 389 tcaccttcgagcatcctcaccacctccgacatctttggacggtccaggggggagccctgc 448
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 656 tcaccttcgagcatcctcaccacctccgacatctttgggaggtccaacggggagccctgc 597
Query: 449 gtgcagaggagtgccacctgaataaggctctccacctcgacctcctcgtaggctttctgc 508
|||||||||||||||||||| || ||| |||||||||||| |||||||||||| ||||||
Sbjct: 596 gtgcagaggagtgccacctggatcaggttctccacctcgatctcctcgtaggcgttctgc 537
Query: 509 agatctgggtccaccagcatctccaccttcttctccttcaacagtcctttcacccagtca 568
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 536 agatctgggtccaccagcatctccaccttcttctccttcagcagtcctttcacccagtca 477
Query: 569 agaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctctggccagta 628
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 476 agaagcataacatcgtcatcatttgcaagacgagcaagatcaaatgccctctggccagta 417
Query: 629 ataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaagacttgccg 688
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 416 ataagctccagaagcatgatcccatagccaaaaacatcagtcttttcagaggacttgcca 357
Query: 689 gtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgttgtgacatgg 748
|| ||||||||||| || |||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 356 gtggataggtactcaggcgcaatgtgtccaattgttccacggacagcagttgtgacatgg 297
Query: 749 gtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcctcgaagtcc 808
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 296 gtatctttgtagtccataagcttggcaagcccaaaatcacccacaactgcctcgaagtcc 237
Query: 809 tcatccaaaagaatatttgcagctttgacatcccgatggatgattttgggatcgcagtga 868
|||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 236 tcatggaaaagaatatttgcagctttgagatcccgatggatgattttgggatcgcagtga 177
Query: 869 tcatgcaagtaagaaagtcctcttgcagatcccagtgcaatccgtcttc---ttggttcc 925
||||||||||||||||||||||||||| |||| || ||||||||||||| ||| ||||
Sbjct: 176 tcatgcaagtaagaaagtcctcttgcacatccaagcgcaatccgtcttcttgttgtttcc 117
Query: 926 cagctaagaggtggctcagatggctgccgctctcgtaaacgtgatgccacactcccgtta 985
|| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||
Sbjct: 116 cacttaacaggtggctcagattgctgtcgctctcgtaaacgtgatgccacactcccatta 57
Query: 986 gccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacgaag 1041
||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||
Sbjct: 56 gccatgtatgggtagactagcaaccgttcagtaggcgtcatgcagaaaccacgaag 1
>gb|BM325664.1|BM325664 PIC1_47_C09.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 604
Score = 959 bits (484), Expect = 0.0
Identities = 568/596 (95%)
Strand = Plus / Minus
Query: 1133 cttttcactgctaccaatgagccatcagcaagccttcctttgtacacttttccaaaaccg 1192
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 604 cttttcactgctaccaaagagccatcagcaagccttcccttgtacacttttccaaaacca 545
Query: 1193 cctcttcctaaaatgttcttgttactgaaattatcagttgcaacttgaagctcccgcaat 1252
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cctcttcctaaaatgttcttgttactgaaattatcagttgcaacttgaagctcccgcaac 485
Query: 1253 gaaaactttttgagctgaccaagatggacttctggatcctcctcggcaggaacatcgaag 1312
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 484 gaaaactttttgagctgaccaagatggacttctggatcctcttcggcaggtacatcgaag 425
Query: 1313 aaatgctcttcaggtttacgacggcgccacattgcaaatgcaattgcaggaacagcaaac 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aaatgctcttcaggtttacgacggcgccacattgcaaatgcaattgcaggaacagcaaac 365
Query: 1373 accaatgctgcaccagcagcaacacctccagctattgctccagtgctagaagcaccagta 1432
||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 364 accaatgctgcaccagcagcaacgcctccagcgattgctccagtgctagaggcaccggtt 305
Query: 1433 gattgagttgggggagatggaggattgaatggaggaggtggggaaaagggaggagcccca 1492
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 304 gattgggttgggggagatggaggattgaatggaggaggcggggaaaagggaggagcccca 245
Query: 1493 gggcagggcttcgaagtaccagggccacaaagatttggattgttggcaaaacttataggg 1552
||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 244 gggcagggcttcgtagtaccagggccacaaaggcctggattgttggcaaaactaataggg 185
Query: 1553 gtgaagagtgaaaaggagccagtcgatgggacttgtcctgagaggttgttgttcgagaga 1612
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 184 gtgaagagtgaaaaggagcctgttgatgggacttgtcctgagaggttgttgttcgagaga 125
Query: 1613 tccagtacttggagagtggagatattggtcaaggatacgggaatcgggccaaccaagcta 1672
|||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||
Sbjct: 124 tccagtacttggagagtggagatattggtcaaggatacaggaatttgaccaaccaagctg 65
Query: 1673 ttgttgttaagacgtaggaaacgcagcttcactagattccccaggctgtcagggat 1728
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 64 ttgttgttaagacgtaggaaccgcagcttcagaagattccccaggctgtcagggat 9
>gb|BE598826.1|BE598826 PI1_83_G03.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 571
Score = 872 bits (440), Expect = 0.0
Identities = 532/563 (94%)
Strand = Plus / Minus
Query: 1407 ttgctccagtgctagaagcaccagtagattgagttgggggagatggaggattgaatggag 1466
|||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 571 ttgctccagtgctagaggcaccggttgattgggttgggggagatggaggattgaatggag 512
Query: 1467 gaggtggggaaaagggaggagccccagggcagggcttcgaagtaccagggccacaaagat 1526
|||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 511 gaggcggggaaaagggaggagccncagggcagggcttcgtagtaccagggccacaaaggc 452
Query: 1527 ttggattgttggcaaaacttataggggtgaagagtgaaaaggagccagtcgatgggactt 1586
|||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||
Sbjct: 451 ctggattgttggcaaaactaataggggtgaagagtgaaaaggagcctgttgatgggactt 392
Query: 1587 gtcctgagaggttgttgttcgagagatccagtacttggagagtggagatattggtcaagg 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gtcctgagaggttgttgttcgagagatccagtacttggagagtggagatattggtcaagg 332
Query: 1647 atacgggaatcgggccaaccaagctattgttgttaagacgtaggaaacgcagcttcacta 1706
|||| ||||| | ||||||||||| |||||||||||||||||||| |||||||||| |
Sbjct: 331 atacaggaatttgaccaaccaagctgttgttgttaagacgtaggaaccgcagcttcagaa 272
Query: 1707 gattccccaggctgtcagggatattgccagagaagttgttcatatacagatccaaactga 1766
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 271 gattccccaggctgtcagggatactgccagagaagttgttcatatacagatccaaactga 212
Query: 1767 ccaggttagtcaggttccccagttcagggggtattgtcccacttatgttgttgctgtaaa 1826
||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 211 ccaagttagtcaagttccccagttcagggggtattgttccacttatgttgttgctgtaaa 152
Query: 1827 gctccaaatattggagatttttcagctggccaagttgtggcactagaacgccagataatt 1886
|||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||
Sbjct: 151 gctccaaatattggagatttttcagctgaccaagttgtggcactaggacaccagacaatt 92
Query: 1887 gtgcatttccaaggtcaactctgataacactgttatcgttgttacacgtaacatggaacc 1946
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 91 gtgcatttccgaggtcaactctgataacactgttatcgttgttacacgtaacgtggaacc 32
Query: 1947 atgtacatggattaacaagagtg 1969
|||||||||||||||||||||||
Sbjct: 31 atgtacatggattaacaagagtg 9
>gb|BE599188.1|BE599188 PI1_86_D11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 537
Score = 870 bits (439), Expect = 0.0
Identities = 508/531 (95%)
Strand = Plus / Minus
Query: 959 cgtaaacgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcagta 1018
||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||
Sbjct: 537 cgtaaacgtgatgccacactcccattagccatgtatgggtagactagcaaccgttcagta 478
Query: 1019 ggtgtcatgcagaaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatc 1078
|| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 477 ggcgtcatgcagaaaccacgaagtctgagaaggttcctgtgcactgccatgctaatcatc 418
Query: 1079 tcaacctctgtttggaactgaagctcaccaccaggtgtacgctcctcttttagtcttttc 1138
||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 417 tcaacctctgtttggaactgaagttcaccaccaggtgttcgctcctcttttagccttttc 358
Query: 1139 actgctaccaatgagccatcagcaagccttcctttgtacacttttccaaaaccgcctctt 1198
||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 357 actgctaccaaagagccatcagcaagccttcccttgtacacttttccaaaaccacctctt 298
Query: 1199 cctaaaatgttcttgttactgaaattatcagttgcaacttgaagctcccgcaatgaaaac 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 297 cctaaaatgttcttgttactgaaattatcagttgcaacttgaagctcccgcaacgaaaac 238
Query: 1259 tttttgagctgaccaagatggacttctggatcctcctcggcaggaacatcgaagaaatgc 1318
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 237 tttttgagctgaccaagatggacttctggatcctcttcggcaggtacatcgaagaaatgc 178
Query: 1319 tcttcaggtttacgacggcgccacattgcaaatgcaattgcaggaacagcaaacaccaat 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tcttcaggtttacgacggcgccacattgcaaatgcaattgcaggaacagcaaacaccaat 118
Query: 1379 gctgcaccagcagcaacacctccagctattgctccagtgctagaagcaccagtagattga 1438
||||||||||||||||| |||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 117 gctgcaccagcagcaacgcctccagcgattgctccagtgctagaggcaccggttgattgg 58
Query: 1439 gttgggggagatggaggattgaatggaggaggtggggaaaagggaggagcc 1489
|||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 57 gttgggggagatggaggattgaatggaggaggcggggaaaagggaggagcc 7
>gb|BE599023.1|BE599023 PI1_86_D11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 666
Score = 854 bits (431), Expect = 0.0
Identities = 518/545 (95%), Gaps = 4/545 (0%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 487
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 486 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 428
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 427 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 368
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 367 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 308
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 307 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtcc 248
Query: 434 aggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacctcc 493
| |||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||
Sbjct: 247 aacggggagccctgcgtgcagaggagtgccacctggatcaggttctccacctcgatctcc 188
Query: 494 tcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaacagt 553
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 187 tcgtaggcgttctgcagatctgggtccaccagcatctccaccttcttctccttcagcagt 128
Query: 554 cctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaat 613
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 127 cctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagcaagatcaaat 68
Query: 614 gccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttc 673
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttt 8
Query: 674 tcaga 678
|||||
Sbjct: 7 tcaga 3
Score = 65.9 bits (33), Expect = 1e-008
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 34 aatgctttagaaattcacccttagatacacgaatttttcaccttaacacaac 85
||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 654 aatgctttanaaattcaccctcagatatacgaa-ttttcaccttaacacaac 604
>gb|BM324174.1|BM324174 PIC1_25_A08.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 519
Score = 823 bits (415), Expect = 0.0
Identities = 487/511 (95%)
Strand = Plus / Minus
Query: 957 ctcgtaaacgtgatgccacactcccgttagccatgtatgggtagactaacaacctttcag 1016
||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||
Sbjct: 519 ctcgtaaacgtgatgccacactcccattagccatgtatgggtagactagcaaccgttcag 460
Query: 1017 taggtgtcatgcagaaaccacgaagtcggagaaggttcttgtgcaccgccatgctaatca 1076
|||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 459 taggcgtcatgcagaaaccacgaagtctgagaaggttcctgtgcactgccatgctaatca 400
Query: 1077 tctcaacctctgtttggaactgaagctcaccaccaggtgtacgctcctcttttagtcttt 1136
||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||
Sbjct: 399 tctcaacctctgtttggaactgaagttcaccaccaggtgttcgctcctcttttagccttt 340
Query: 1137 tcactgctaccaatgagccatcagcaagccttcctttgtacacttttccaaaaccgcctc 1196
||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 339 tcactgctaccaaagagccatcagcaagccttcccttgtacacttttccaaaaccacctc 280
Query: 1197 ttcctaaaatgttcttgttactgaaattatcagttgcaacttgaagctcccgcaatgaaa 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 279 ttcctaaaatgttcttgttactgaaattatcagttgcaacttgaagctcccgcaacataa 220
Query: 1257 actttttgagctgaccaagatggacttctggatcctcctcggcaggaacatcgaagaaat 1316
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 219 actttttgagctgaccaagatggacttctggatcctcttcggcaggtacatcgaagaaat 160
Query: 1317 gctcttcaggtttacgacggcgccacattgcaaatgcaattgcaggaacagcaaacacca 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gctcttcaggtttacgacggcgccacattgcaaatgcaattgcaggaacagcaaacacca 100
Query: 1377 atgctgcaccagcagcaacacctccagctattgctccagtgctagaagcaccagtagatt 1436
||||||||||||||||||| |||||||| ||||||||||||||||| ||||| || ||||
Sbjct: 99 atgctgcaccagcagcaacgcctccagcgattgctccagtgctagaggcaccggttgatt 40
Query: 1437 gagttgggggagatggaggattgaatggagg 1467
| |||||||||||||||||||||||||||||
Sbjct: 39 gggttgggggagatggaggattgaatggagg 9
>gb|BE600711.1|BE600711 PI1_91_F12.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 533
Score = 813 bits (410), Expect = 0.0
Identities = 497/524 (94%), Gaps = 4/524 (0%)
Strand = Plus / Minus
Query: 167 aagctacctttcatatacacaagcagcaattagactgaatcttggccaattcagtgtt-- 224
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 533 aagctacctttcatatacacaagcagcaattagactgaatcttggc-aattcagtgttga 475
Query: 225 -ttctttcatcggagtcgtggagtggctaccttgggccggacagctccacggcacgaagg 283
||||||| || |||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 474 attctttcgtctgagtcgccgagtggctaccttgggccggatagctccacggcacgaagg 415
Query: 284 ttgtacgtggaatcgacgatccagtcattgcggagcggtgccgactcagcctcctgcctc 343
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 414 ttgtaggtggaatcgacgatccagtcattgcggagcggtgcggactcagcctcctgcctc 355
Query: 344 accacctctactttctgccattcgtcccaacgctctgccagcccgtcaccttcgagcatc 403
|||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 354 accacctccactttctgccactcgtcccagcgctctgccaggccgtcaccttcgagcatc 295
Query: 404 ctcaccacctccgacatctttggacggtccaggggggagccctgcgtgcagaggagtgcc 463
||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 294 ctcaccacctccgacatctttgggcggtccaacggggagccctgcgtgcagaggagtgcc 235
Query: 464 acctgaataaggctctccacctcgacctcctcgtaggctttctgcagatctgggtccacc 523
||||| || ||| |||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 234 acctggatcaggttctccacctcgatctcctcgtaggcgttctgcagatctgggtccacc 175
Query: 524 agcatctccaccttcttctccttcaacagtcctttcacccagtcaagaagcataacatcg 583
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 174 agcatctccaccttcttctccttcagcagtcctttcacccagtcaagaagcataacatcg 115
Query: 584 tcatcatttgcaagacgagctagatcaaatgccctctggccagtaataagctccagaagc 643
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tcatcatttgcaagacgagcaagatcaaatgccctctggccagtaataagctccagaagc 55
Query: 644 atgatcccatagccaaaaacatcagtcttctcagaagacttgcc 687
||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 54 atgatcccatagccaaaaacatcagtcttttcagaggacttgcc 11
>gb|BM322546.1|BM322546 PIC1_6_B09.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 498
Score = 797 bits (402), Expect = 0.0
Identities = 468/490 (95%)
Strand = Plus / Minus
Query: 978 tcccgttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccac 1037
|||| |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 498 tcccattagccatgtatgggtagactagcaaccgttcagtaggcgtcatgcagaaaccac 439
Query: 1038 gaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtttggaact 1097
|||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 438 gaagtctgagaaggttcctgtgcactgccatgctaatcatctcaacctctgtttggaact 379
Query: 1098 gaagctcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaatgagccat 1157
|||| |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||
Sbjct: 378 gaagttcaccaccaggtgttcgctcctcttttagccttttcactgctaccaaagagccat 319
Query: 1158 cagcaagccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttcttgttac 1217
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 318 cagcaagccttcccttgtacacttttccaaaaccacctcttcctaaaatgttcttgttac 259
Query: 1218 tgaaattatcagttgcaacttgaagctcccgcaatgaaaactttttgagctgaccaagat 1277
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 258 tgaaattatcagttgcaacttgaagctcccgcaacgaaaactttttgagctgaccaagat 199
Query: 1278 ggacttctggatcctcctcggcaggaacatcgaagaaatgctcttcaggtttacgacggc 1337
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 198 ggacttctggatcctcttcggcaggtacatcgaagaaatgctcttcaggtttacgacggc 139
Query: 1338 gccacattgcaaatgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacac 1397
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 138 gccacattgcaaatgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacgc 79
Query: 1398 ctccagctattgctccagtgctagaagcaccagtagattgagttgggggagatggaggat 1457
||||||| ||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 78 ctccagcgattgctccagtgctagaggcaccggttgattgggttgggggagatggaggat 19
Query: 1458 tgaatggagg 1467
||||||||||
Sbjct: 18 tgaatggagg 9
>gb|BE364036.1|BE364036 PI1_11_B09.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 502
Score = 769 bits (388), Expect = 0.0
Identities = 469/494 (94%), Gaps = 4/494 (0%)
Strand = Plus / Minus
Query: 182 tacacaagcagcaattagactgaatcttggccaattcagtgtt---ttctttcatcggag 238
||||||||||||||||||||||||||||||| ||||||||||| ||||||| || |||
Sbjct: 502 tacacaagcagcaattagactgaatcttggc-aattcagtgttgaattctttcgtctgag 444
Query: 239 tcgtggagtggctaccttgggccggacagctccacggcacgaaggttgtacgtggaatcg 298
||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 443 tcgccgagtggctaccttgggccggatagctccacggcacgaaggttgtaggtggaatcg 384
Query: 299 acgatccagtcattgcggagcggtgccgactcagcctcctgcctcaccacctctactttc 358
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 383 acgatccagtcattgcggagcggtgcggactcagcctcctgcctcaccacctccactttc 324
Query: 359 tgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgac 418
||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 323 tgccactcgtcccagcgctctgccaggccgtcaccttcgagcatcctcaccacctccgac 264
Query: 419 atctttggacggtccaggggggagccctgcgtgcagaggagtgccacctgaataaggctc 478
|||||||| ||||||| |||||||||||||||||||||||||||||||| || ||| ||
Sbjct: 263 atctttgggcggtccaacggggagccctgcgtgcagaggagtgccacctggatcaggttc 204
Query: 479 tccacctcgacctcctcgtaggctttctgcagatctgggtccaccagcatctccaccttc 538
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 203 tccacctcgatctcctcgtaggcgttctgcagatctgggtccaccagcatctccaccttc 144
Query: 539 ttctccttcaacagtcctttcacccagtcaagaagcataacatcgtcatcatttgcaaga 598
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ttctccttcagcagtcctttcacccagtcaagaagcataacatcgtcatcatttgcaaga 84
Query: 599 cgagctagatcaaatgccctctggccagtaataagctccagaagcatgatcccatagcca 658
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 cgagcaagatcaaatgccctctggccagtaataagctccagaagcatgatcccatagcca 24
Query: 659 aaaacatcagtctt 672
||||||||||||||
Sbjct: 23 aaaacatcagtctt 10
>gb|BE364131.1|BE364131 PI1_11_B09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 635
Score = 710 bits (358), Expect = 0.0
Identities = 439/464 (94%), Gaps = 4/464 (0%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 404
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 403 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 345
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 344 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 285
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 284 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 225
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 224 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtcc 165
Query: 434 aggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacctcc 493
| |||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||
Sbjct: 164 aacggggagccctgcgtgcagaggagtgccacctggatcaggttctccacctcgatctcc 105
Query: 494 tcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaacagt 553
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 104 tcgtaggcgttctgcagatctgggtccaccagcatctccaccttcttctccttcagcagt 45
Query: 554 cctttcacccagtcaagaagcataacatcgtcatcatttgcaag 597
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 cctttcacccagtcaagaagcataacatcgtcatcatttgcaag 1
Score = 71.9 bits (36), Expect = 2e-010
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 34 aatgctttagaaattcacccttagatacacgaatttttcaccttaacacaac 85
||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 571 aatgctttagaaattcaccctcagatatacgaa-ttttcaccttaacacaac 521
>gb|BG047834.1|BG047834 OV1_28_D04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 485
Score = 710 bits (358), Expect = 0.0
Identities = 442/468 (94%), Gaps = 4/468 (0%)
Strand = Plus / Minus
Query: 182 tacacaagcagcaattagactgaatcttggccaattcagtgtt---ttctttcatcggag 238
||||||||||||||||||||||||||||||| ||||||||||| ||||||| || |||
Sbjct: 485 tacacaagcagcaattagactgaatcttggc-aattcagtgttgaattctttcgtctgag 427
Query: 239 tcgtggagtggctaccttgggccggacagctccacggcacgaaggttgtacgtggaatcg 298
||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 426 tcgccgagtggctaccttgggccggatagctccacggcacgaaggttgtaggtggaatcg 367
Query: 299 acgatccagtcattgcggagcggtgccgactcagcctcctgcctcaccacctctactttc 358
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 366 acgatccagtcattgcggagcggtgcggactcagcctcctgcctcaccacctccacttta 307
Query: 359 tgccattcgtcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgac 418
||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 306 tgccactcgtcccagcgctctgccaggccgtcaccttcgagcatcctcaccacctccgac 247
Query: 419 atctttggacggtccaggggggagccctgcgtgcagaggagtgccacctgaataaggctc 478
|||||||| ||||||| |||||||||||||||||||||||||||||||| || ||| ||
Sbjct: 246 atctttgggcggtccaacggggagccctgcgtgcagaggagtgccacctggatcaggttc 187
Query: 479 tccacctcgacctcctcgtaggctttctgcagatctgggtccaccagcatctccaccttc 538
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 186 tccacctcgatctcctcgtaggcgttctgcagatctgggtccaccagcatctccaccttc 127
Query: 539 ttctccttcaacagtcctttcacccagtcaagaagcataacatcgtcatcatttgcaaga 598
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ttctccttcagcagtcctttcacccagtcaagaagcataacatcgtcatcatttgcaaga 67
Query: 599 cgagctagatcaaatgccctctggccagtaataagctccagaagcatg 646
||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 cgagcaagatcaaatgccctctggccagtaataagctccagaagcatg 19
>gb|BE598205.1|BE598205 PI1_66_H12.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 566
Score = 676 bits (341), Expect = 0.0
Identities = 404/425 (95%)
Strand = Plus / Minus
Query: 1712 cccaggctgtcagggatattgccagagaagttgttcatatacagatccaaactgaccagg 1771
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 566 cccaggctgtcagggatactgccagagaagttgttcatatacagatccaaactgaccaag 507
Query: 1772 ttagtcaggttccccagttcagggggtattgtcccacttatgttgttgctgtaaagctcc 1831
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 506 ttagtcaagttccccagttcagggggtattgttccacttatgttgttgctgtaaagctcc 447
Query: 1832 aaatattggagatttttcagctggccaagttgtggcactagaacgccagataattgtgca 1891
||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||
Sbjct: 446 aaatattggagatttttcagctgaccaagttgtggcactaggacaccagacaattgtgca 387
Query: 1892 tttccaaggtcaactctgataacactgttatcgttgttacacgtaacatggaaccatgta 1951
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 386 tttccgaggtcaactctgataacactgttatcgttgttacacgtaacgtggaaccatgta 327
Query: 1952 catggattaacaagagtgggatcccaactctgcaagacattgttagcatctttcaagctc 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 catggattaacaagagtgggatcccaactctgcaagacattgttagcatctttcaagctc 267
Query: 2012 tgacgcaggctgtacagggcatcaccctcggtgttggcgacgacctgtcccggccctagc 2071
|| |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 266 tgccgcaggctgtacagagcatcaccctcggtgttggcgacgacacgtcccggcccgagc 207
Query: 2072 agcaccgcgaccgcaaggaccaccgcccaccacctcccagccgacgccgacgccgccatt 2131
|||||||| ||||||||||||||||||||||| ||||| |||| ||| | ||||||||||
Sbjct: 206 agcaccgccaccgcaaggaccaccgcccaccagctccccgccgccgcagccgccgccatt 147
Query: 2132 ccaac 2136
|||||
Sbjct: 146 ccaac 142
>gb|BE366607.1|BE366607 PI1_35_G02.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 673
Score = 618 bits (312), Expect = e-175
Identities = 390/414 (94%), Gaps = 4/414 (0%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 361
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 360 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 302
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 242
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 241 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 182
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtcc 122
Query: 434 aggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacctcc 493
| |||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||
Sbjct: 121 aacggggagccctgcgtgcagaggagtgccacctggatcaggttctccacctcgatctcc 62
Query: 494 tcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttc 547
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtaggcgttctgcagatctgggtccaccagcatctccaccttcttctccttc 8
Score = 77.8 bits (39), Expect = 4e-012
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 3 atcgctgctacattcgctggactattgcaagaatgctttagaaattcacccttagataca 62
||||||||||||||| | ||| | | ||| ||||||||||||||||||||| ||||| |
Sbjct: 559 atcgctgctacattccccagaccactacaacaatgctttagaaattcaccctcagatata 500
Query: 63 cgaatttttcaccttaacacaac 85
|||| ||||||||||||||||||
Sbjct: 499 cgaa-ttttcaccttaacacaac 478
>gb|BE594637.1|BE594637 PI1_35_G02.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 565
Score = 618 bits (312), Expect = e-175
Identities = 390/414 (94%), Gaps = 4/414 (0%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 361
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 360 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 302
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 242
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 241 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 182
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtcc 122
Query: 434 aggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacctcc 493
| |||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||
Sbjct: 121 aacggggagccctgcgtgcagaggagtgccacctggatcaggttctccacctcgatctcc 62
Query: 494 tcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttc 547
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtaggcgttctgcagatctgggtccaccagcatctccaccttcttctccttc 8
Score = 77.8 bits (39), Expect = 4e-012
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 3 atcgctgctacattcgctggactattgcaagaatgctttagaaattcacccttagataca 62
||||||||||||||| | ||| | | ||| ||||||||||||||||||||| ||||| |
Sbjct: 559 atcgctgctacattccccagaccactacaacaatgctttagaaattcaccctcagatata 500
Query: 63 cgaatttttcaccttaacacaac 85
|||| ||||||||||||||||||
Sbjct: 499 cgaa-ttttcaccttaacacaac 478
>gb|BE598493.1|BE598493 PI1_83_G12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 635
Score = 618 bits (312), Expect = e-175
Identities = 390/414 (94%), Gaps = 4/414 (0%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 361
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 360 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 302
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 242
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 241 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 182
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtcc 122
Query: 434 aggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacctcc 493
| |||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||
Sbjct: 121 aacggggagccctgcgtgcagaggagtgccacctggatcaggttctccacctcgatctcc 62
Query: 494 tcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttc 547
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtaggcgttctgcagatctgggtccaccagcatctccaccttcttctccttc 8
Score = 77.8 bits (39), Expect = 4e-012
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 3 atcgctgctacattcgctggactattgcaagaatgctttagaaattcacccttagataca 62
||||||||||||||| | ||| | | ||| ||||||||||||||||||||| ||||| |
Sbjct: 559 atcgctgctacattccccagaccactacaacaatgctttagaaattcaccctcagatata 500
Query: 63 cgaatttttcaccttaacacaac 85
|||| ||||||||||||||||||
Sbjct: 499 cgaa-ttttcaccttaacacaac 478
>gb|BE598817.1|BE598817 PI1_83_G12.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 504
Score = 618 bits (312), Expect = e-175
Identities = 390/414 (94%), Gaps = 4/414 (0%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 361
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 360 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 302
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 242
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 241 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 182
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtcc 122
Query: 434 aggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacctcc 493
| |||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||
Sbjct: 121 aacggggagccctgcgtgcagaggagtgccacctggatcaggttctccacctcgatctcc 62
Query: 494 tcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttc 547
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtaggcgttctgcagatctgggtccaccagcatctccaccttcttctccttc 8
>gb|BG048156.1|BG048156 OV1_28_D04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 611
Score = 611 bits (308), Expect = e-172
Identities = 386/410 (94%), Gaps = 4/410 (0%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 350
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 349 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 291
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 290 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 231
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 230 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 171
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 170 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtcc 111
Query: 434 aggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacctcc 493
| |||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||
Sbjct: 110 aacggggagccctgcgtgcagaggagtgccacctggatcaggttctccacctcgatctcc 51
Query: 494 tcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctc 543
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 tcgtaggcgttctgcagatctgggtccaccagcatctccaccttcttctc 1
Score = 77.8 bits (39), Expect = 4e-012
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 3 atcgctgctacattcgctggactattgcaagaatgctttagaaattcacccttagataca 62
||||||||||||||| | ||| | | ||| ||||||||||||||||||||| ||||| |
Sbjct: 547 atcgctgctacattccccagaccactacaacaatgctttagaaattcaccctcagatata 488
Query: 63 cgaatttttcaccttaacacaac 85
|||| ||||||||||||||||||
Sbjct: 487 cgaa-ttttcaccttaacacaac 466
>gb|BE601334.1|BE601334 PI1_91_F12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 547
Score = 535 bits (270), Expect = e-150
Identities = 345/368 (93%), Gaps = 4/368 (1%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 310
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 309 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 251
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 250 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 191
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 190 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 131
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 130 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtcc 71
Query: 434 aggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacctcc 493
| |||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||
Sbjct: 70 aacggggagccctgcgtgcagaggagtgccacctggatcaggttctccacctcgatctcc 11
Query: 494 tcgtaggc 501
||||||||
Sbjct: 10 tcgtaggc 3
Score = 77.8 bits (39), Expect = 4e-012
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 3 atcgctgctacattcgctggactattgcaagaatgctttagaaattcacccttagataca 62
||||||||||||||| | ||| | | ||| ||||||||||||||||||||| ||||| |
Sbjct: 508 atcgctgctacattccccagaccactacaacaatgctttagaaattcaccctcagatata 449
Query: 63 cgaatttttcaccttaacacaac 85
|||| ||||||||||||||||||
Sbjct: 448 cgaa-ttttcaccttaacacaac 427
>gb|BE598502.1|BE598502 PI1_83_G03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 539
Score = 511 bits (258), Expect = e-143
Identities = 332/355 (93%), Gaps = 4/355 (1%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 295
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 294 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 236
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 235 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 176
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 175 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 116
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 115 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtcc 56
Query: 434 aggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcga 488
| |||||||||||||||||||||||||||||||| || | | ||||||||||||
Sbjct: 55 aacggggagccctgcgtgcagaggagtgccacctgnatcaagttctccacctcga 1
Score = 77.8 bits (39), Expect = 4e-012
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 3 atcgctgctacattcgctggactattgcaagaatgctttagaaattcacccttagataca 62
||||||||||||||| | ||| | | ||| ||||||||||||||||||||| ||||| |
Sbjct: 493 atcgctgctacattccccagaccactacaacaatgctttagaaattcaccctcagatata 434
Query: 63 cgaatttttcaccttaacacaac 85
|||| ||||||||||||||||||
Sbjct: 433 cgaa-ttttcaccttaacacaac 412
>gb|BE597915.1|BE597915 PI1_66_H12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 383
Score = 500 bits (252), Expect = e-139
Identities = 351/382 (91%), Gaps = 4/382 (1%)
Strand = Plus / Minus
Query: 149 tgtcgctaacaattccaaaagctacctttcatatacacaagcagcaattagactgaatct 208
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 tgtcgctaacaattccaaaagctacctttcatatacacaagcagcaattacactgaatct 322
Query: 209 tggccaattcagtgtt---ttctttcatcggagtcgtggagtggctaccttgggccggac 265
|||| ||||||||||| ||||||| || |||||| |||||||||||||||||||||
Sbjct: 321 tggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctaccttgggccggat 263
Query: 266 agctccacggcacgaaggttgtacgtggaatcgacgatccagtcattgcggagcggtgcc 325
||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 262 agctccacggcacgaaggttgtaggtggaatcgacgatccagtcattgccgagcggtgcg 203
Query: 326 gactcagcctcctgcctcaccacctctactttctgccattcgtcccaacgctctgccagc 385
||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 202 gactcagcctcctgcctcaccacctacactttctgccactcgtcccagcgctctgccagg 143
Query: 386 ccgtcaccttcgagcatcctcaccacctccgacatctttggacggtccaggggggagccc 445
|||||||||| |||||| ||||||||||||||||| ||||| ||||||| |||||||||
Sbjct: 142 ccgtcaccttagagcattctcaccacctccgacatttttgggcggtccaacggggagccc 83
Query: 446 tgcgtgcagaggagtgccacctgaataaggctctccacctcgacctcctcgtaggctttc 505
|||||||||| |||||||||||| || ||| ||||||||| || |||||||||||| |||
Sbjct: 82 tgcgtgcagaagagtgccacctggatcaggttctccacctagatctcctcgtaggcgttc 23
Query: 506 tgcagatctgggtccaccagca 527
||||||||||||||||||||||
Sbjct: 22 tgcagatctgggtccaccagca 1
>gb|BM331493.1|BM331493 PIC1_72_A02.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 542
Score = 490 bits (247), Expect = e-136
Identities = 310/329 (94%), Gaps = 4/329 (1%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 269
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 268 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 210
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 209 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 150
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 149 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 90
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 89 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtcc 30
Query: 434 aggggggagccctgcgtgcagaggagtgc 462
| ||||||||||||||||||||||||||
Sbjct: 29 aacggggagccctgcgtgcagaggagtgc 1
Score = 77.8 bits (39), Expect = 4e-012
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 3 atcgctgctacattcgctggactattgcaagaatgctttagaaattcacccttagataca 62
||||||||||||||| | ||| | | ||| ||||||||||||||||||||| ||||| |
Sbjct: 468 atcgctgctacattccccagaccactacaacaatgctttagaaattcaccctcagatata 409
Query: 63 cgaatttttcaccttaacacaac 85
|||| ||||||||||||||||||
Sbjct: 408 cgaa-ttttcaccttaacacaac 387
>gb|BG273210.1|BG273210 OV2_28_C05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 463
Score = 462 bits (233), Expect = e-128
Identities = 299/319 (93%), Gaps = 4/319 (1%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 259
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 258 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 200
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 199 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 140
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 139 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 80
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtcc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 79 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcgggcc 20
Query: 434 aggggggagccctgcgtgc 452
| ||||||||||||||||
Sbjct: 19 aacggggagccctgcgtgc 1
Score = 71.9 bits (36), Expect = 2e-010
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 34 aatgctttagaaattcacccttagatacacgaatttttcaccttaacacaac 85
||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 426 aatgctttagaaattcaccctcagatatacgaa-ttttcaccttaacacaac 376
>gb|BM330111.1|BM330111 PIC1_47_C09.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 588
Score = 446 bits (225), Expect = e-123
Identities = 282/299 (94%), Gaps = 4/299 (1%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 239
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 238 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 180
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 179 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 120
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 119 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 60
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacggtc 432
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 59 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgacatctttgggcggtc 1
Score = 77.8 bits (39), Expect = 4e-012
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 3 atcgctgctacattcgctggactattgcaagaatgctttagaaattcacccttagataca 62
||||||||||||||| | ||| | | ||| ||||||||||||||||||||| ||||| |
Sbjct: 437 atcgctgctacattccccagaccactacaacaatgctttagaaattcaccctcagatata 378
Query: 63 cgaatttttcaccttaacacaac 85
|||| ||||||||||||||||||
Sbjct: 377 cgaa-ttttcaccttaacacaac 356
>gb|BM328664.1|BM328664 PIC1_25_A08.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 319
Score = 444 bits (224), Expect = e-122
Identities = 295/318 (92%), Gaps = 3/318 (0%)
Strand = Plus / Minus
Query: 213 caattcagtgtt---ttctttcatcggagtcgtggagtggctaccttgggccggacagct 269
|||||||||||| ||||||| || |||||| ||||||||||||||||||||| ||||
Sbjct: 318 caattcagtgttgaattctttcgtctgagtcgccgagtggctaccttgggccggatagct 259
Query: 270 ccacggcacgaaggttgtacgtggaatcgacgatccagtcattgcggagcggtgccgact 329
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 258 ccacggcacgaaggttgtaggtggaatcgacgatccagtcattgcggagcggtgcggact 199
Query: 330 cagcctcctgcctcaccacctctactttctgccattcgtcccaacgctctgccagcccgt 389
|||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||
Sbjct: 198 cagcctcctgcctcaccacctccactttctgccactcgtcccagcgctctgccaggccgt 139
Query: 390 caccttcgagcatcctcaccacctccgacatctttggacggtccaggggggagccctgcg 449
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 138 caccttcgagcatcctcaccacctccgacatctttgggcggtccaacggggagccctgcg 79
Query: 450 tgcagaggagtgccacctgaataaggctctccacctcgacctcctcgtaggctttctgca 509
||||||||||| ||||||| || ||| |||||||||||| |||||||||||| |||||||
Sbjct: 78 tgcagaggagtaccacctggatcaggttctccacctcgatctcctcgtaggcgttctgca 19
Query: 510 gatctgggtccaccagca 527
||||||||||||||||||
Sbjct: 18 gatctgggtccaccagca 1
>gb|BM327028.1|BM327028 PIC1_6_B09.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 501
Score = 428 bits (216), Expect = e-118
Identities = 270/286 (94%), Gaps = 4/286 (1%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 226
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
|||||||||||||||| ||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 225 tagactgaatcttggc-aattcagtgttgaattctttcgtctgagtcgccgagtggctac 167
Query: 254 cttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtcattg 313
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 166 cttgggccggatagctccacggcacgaaggttgtaggtggaatcgacgatccagtcattg 107
Query: 314 cggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcccaa 373
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 106 cggagcggtgcggactcagcctcctgcctcaccacctccactttctgccactcgtcccag 47
Query: 374 cgctctgccagcccgtcaccttcgagcatcctcaccacctccgaca 419
||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 46 cgctctgccaggccgtcaccttcgagcatcctcaccacctccgaca 1
Score = 77.8 bits (39), Expect = 4e-012
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 3 atcgctgctacattcgctggactattgcaagaatgctttagaaattcacccttagataca 62
||||||||||||||| | ||| | | ||| ||||||||||||||||||||| ||||| |
Sbjct: 424 atcgctgctacattccccagaccactacaacaatgctttagaaattcaccctcagatata 365
Query: 63 cgaatttttcaccttaacacaac 85
|||| ||||||||||||||||||
Sbjct: 364 cgaa-ttttcaccttaacacaac 343
>gb|BE356037.1|BE356037 DG1_121_D02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 307
Score = 385 bits (194), Expect = e-104
Identities = 274/300 (91%), Gaps = 3/300 (1%)
Strand = Plus / Minus
Query: 213 caattcagtgtt---ttctttcatcggagtcgtggagtggctaccttgggccggacagct 269
|||||||||||| ||||||| || |||||| ||||||||||||||||||||| ||||
Sbjct: 303 caattcagtgttgaattctttcgtctgagtcgccgagtggctaccttgggccggatagct 244
Query: 270 ccacggcacgaaggttgtacgtggaatcgacgatccagtcattgcggagcggtgccgact 329
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 243 ccacggcacgaaggttgtaggtggaatcgacgatccagtcattgcggagcggtgcggact 184
Query: 330 cagcctcctgcctcaccacctctactttctgccattcgtcccaacgctctgccagcccgt 389
|||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||
Sbjct: 183 cagcctcctgcctcaccacctccactttctgccactcgtcccagcgctctgccaggccgt 124
Query: 390 caccttcgagcatcctcaccacctccgacatctttggacggtccaggggggagccctgcg 449
|||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||
Sbjct: 123 caccttcgagcatcctcaccacctgcgacatctttgggcggcccaacggggagccctgcg 64
Query: 450 tgcagaggagtgccacctgaataaggctctccacctcgacctcctcgtaggctttctgca 509
|||||| |||||||||||| || ||| |||||||||||| ||||||||| || |||||||
Sbjct: 63 tgcagatgagtgccacctggatcaggttctccacctcgatctcctcgtaagcgttctgca 4
>gb|CD425978.1|CD425978 SA1_15_E03.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_15_E03_A002 5', mRNA sequence
Length = 601
Score = 254 bits (128), Expect = 3e-065
Identities = 272/320 (85%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||| | |||| ||||||||||||||||||||| | |||||||||||||
Sbjct: 585 ccagtgaagttgttgaggtacaaatccaaactgaccaggttagttaagttccccagttca 526
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaagctccaaatattggagatttttcagc 1852
|| ||||||| ||||||||||||||| |||||||| || | |||||| | ||||||||
Sbjct: 525 ggtggtattggcccacttatgttgttactgtaaagttctagatattgcatatttttcaat 466
Query: 1853 tggccaagttgtggcactagaacgccagataattgtgcatttccaaggtcaactctgata 1912
|| ||||| |||||||| | || |||| ||||||||||||||| |||| ||||||
Sbjct: 465 tgcccaagctgtggcaccaacggacctgatagttgtgcatttccaagatcaagtctgatg 406
Query: 1913 acactgttatcgttgttacacgtaacatggaaccatgtacatggattaacaagagtggga 1972
||||||||||| |||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 405 acactgttatcagggttacaagtaacatggaaccatgtacatggattaaccagagttgga 346
Query: 1973 tcccaactctgcaagacattgttagcatctttcaagctctgacgcaggctgtacagggca 2032
||||||||||||| |||||||| |||||||| ||| || || |||||||| || |||
Sbjct: 345 tcccaactctgcagcacattgttgttatctttcaggctttgccgtaggctgtaaagagca 286
Query: 2033 tcaccctcggtgttggcgac 2052
|||||||| |||||||||||
Sbjct: 285 tcaccctccgtgttggcgac 266
>gb|CL177097.1|CL177097 104_384_10893597_116_31916_045 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893597, DNA
sequence
Length = 713
Score = 242 bits (122), Expect = 1e-061
Identities = 131/134 (97%)
Strand = Plus / Minus
Query: 1904 actctgataacactgttatcgttgttacacgtaacatggaaccatgtacatggattaaca 1963
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 635 actctgataacactgttatcgttgttacacgtaacgtggaaccatgtacatggattaaca 576
Query: 1964 agagtgggatcccaactctgcaagacattgttagcatctttcaagctctgacgcaggctg 2023
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 575 agagtgggatcccaactctgcaagacattgttagcatctttcaagctctgccgcaggctg 516
Query: 2024 tacagggcatcacc 2037
||||| ||||||||
Sbjct: 515 tacagagcatcacc 502
>gb|CN138649.1|CN138649 OX1_13_C09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_C09_A002 3', mRNA sequence
Length = 683
Score = 232 bits (117), Expect = 1e-058
Identities = 519/653 (79%)
Strand = Plus / Minus
Query: 560 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 619
|||| |||||||||||| ||||| |||| ||| ||||| ||||||||||||| || |
Sbjct: 661 accccgtcaagaagcatgacatcctcattattagcaaggggagctagatcaaaggcacgt 602
Query: 620 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttctcagaa 679
|| || ||||||||||| | || | | || ||||||||||| |||||||| |||||| |
Sbjct: 601 tgtcctgtaataagctctaaaaacgtaattccatagccaaatacatcagttttctcaaag 542
Query: 680 gacttgccggtagataggtactcgggagcaatgtgcccaattgttccacgaacagctgtt 739
|| || || || || ||| | || || |||||||||||||| |||| |||||||| ||
Sbjct: 541 gattttcctgttgaaagggattcaggggcaatgtgcccaatccttccccgaacagcagta 482
Query: 740 gtgacatgggtatccttgtagtccataagcttggcaagcccgaaatcacccacaactgcc 799
|| ||||||||||||||||| ||||| || ||||| | || ||||| ||||| | ||
Sbjct: 481 gttacatgggtatccttgtaatccattagtttggccaaaccaaaatcccccaccccagct 422
Query: 800 tcgaagtcctcatccaaaagaatatttgcagctttgacatcccgatggatgattttggga 859
|||||||| ||||| || | ||||||||| ||||||||||||||||| || || || |||
Sbjct: 421 tcgaagtcttcatctaacaaaatatttgccgctttgacatcccgatgaataatctttgga 362
Query: 860 tcgcagtgatcatgcaagtaagaaagtcctcttgcagatcccagtgcaatccgtcttctt 919
|| || |||||||| || ||||| || || || ||||| |||| |||||||| |||||||
Sbjct: 361 tcacaatgatcatgtaaataagacaggcccctagcagaacccaatgcaatccttcttctt 302
Query: 920 ggttcccagctaagaggtggctcagatggctgccgctctcgtaaacgtgatgccacactc 979
| || ||| || || || ||| ||| |||| |||| |||||||||||| || ||
Sbjct: 301 gtttgccaatctagcggaggttcacctgggggccggtctcttaaacgtgatgcaaccctt 242
Query: 980 ccgttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaaccacga 1039
|| |||||||||||||| || || | ||||||||| || || ||||| ||||| ||||||
Sbjct: 241 ccattagccatgtatggatacacaagcaacctttctgttggggtcatacagaatccacga 182
Query: 1040 agtcggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtttggaactga 1099
|| | | || || |||| || ||||| |||||||||||||| |||||||| |||||
Sbjct: 181 agacccaatagatttctgtgtacagccatactaatcatctcaacttctgtttgaaactgt 122
Query: 1100 agctcaccaccaggtgtacgctcctcttttagtcttttcactgctaccaatgagccatca 1159
| || |||||||| || ||||| || |||||||| || || || || ||||| |||||
Sbjct: 121 aattccccaccaggcgtgcgctcttcctttagtctcttaacagcaactaatgatccatct 62
Query: 1160 gcaagccttcctttgtacacttttccaaaaccgcctcttcctaaaatgttctt 1212
|| |||| ||||||||| ||||| ||||| || |||||||| | |||||||||
Sbjct: 61 gccagccgtcctttgtagactttgccaaatccacctcttccaagaatgttctt 9
>gb|CW447061.1|CW447061 fsbb001f179p17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179p17, DNA
sequence
Length = 509
Score = 230 bits (116), Expect = 4e-058
Identities = 137/144 (95%)
Strand = Plus / Plus
Query: 1688 aggaaacgcagcttcactagattccccaggctgtcagggatattgccagagaagttgttc 1747
||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 48 aggaaccgcagcttcagaagattccccaggctgtcagggatactgccagagaagttgttc 107
Query: 1748 atatacagatccaaactgaccaggttagtcaggttccccagttcagggggtattgtccca 1807
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||
Sbjct: 108 atatacagatccaaactgaccaagttagtcaagttccccagttcagggggtattgttcca 167
Query: 1808 cttatgttgttgctgtaaagctcc 1831
||||||||||||||||||||||||
Sbjct: 168 cttatgttgttgctgtaaagctcc 191
>gb|AW922578.1|AW922578 DG1_45_F03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 291
Score = 200 bits (101), Expect = 4e-049
Identities = 139/150 (92%), Gaps = 4/150 (2%)
Strand = Plus / Minus
Query: 137 atcctttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 196
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atcccttcaaattgtcgctaacaattccaaaagctacctttcatatacacaagcagcaat 91
Query: 197 tagactgaatcttggccaattcagtgtt---ttctttcatcggagtcgtggagtggctac 253
||||||||||||||| ||||||| |||| ||||||| || |||||| ||||||||||
Sbjct: 90 tagactgaatcttgg-caattcantgttgaattctttcgtctgagtcgccgagtggctac 32
Query: 254 cttgggccggacagctccacggcacgaagg 283
||||||||||| ||||||||||||||||||
Sbjct: 31 cttgggccggatagctccacggcacgaagg 2
Score = 71.9 bits (36), Expect = 2e-010
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 34 aatgctttagaaattcacccttagatacacgaatttttcaccttaacacaac 85
||||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 258 aatgctttagaaattcaccctcagatatacgaa-ttttcaccttaacacaac 208
>gb|CL177098.1|CL177098 104_384_10893597_148_31915_045 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893597, DNA
sequence
Length = 747
Score = 196 bits (99), Expect = 6e-048
Identities = 102/103 (99%)
Strand = Plus / Plus
Query: 1904 actctgataacactgttatcgttgttacacgtaacatggaaccatgtacatggattaaca 1963
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 645 actctgataacactgttatcgttgttacacgtaacgtggaaccatgtacatggattaaca 704
Query: 1964 agagtgggatcccaactctgcaagacattgttagcatctttca 2006
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 agagtgggatcccaactctgcaagacattgttagcatctttca 747
Score = 105 bits (53), Expect = 2e-020
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 1831 caaatattggagatttttcagctggccaagttgtggcactagaacgccagataattgtgc 1890
|||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||||
Sbjct: 486 caaatattggagatttttcagctgaccaagttgtggcactaggacaccagacaattgtgc 545
Query: 1891 atttccaaggtca 1903
|||||| ||||||
Sbjct: 546 atttccgaggtca 558
>gb|BM326208.1|BM326208 PIC1_72_A02.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 130
Score = 188 bits (95), Expect = 1e-045
Identities = 113/119 (94%)
Strand = Plus / Minus
Query: 1351 tgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacacctccagctattgc 1410
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 127 tgcaattgcaggaacagcaaacaccaatgctgcaccagcagcaacgcctccagcgattgc 68
Query: 1411 tccagtgctagaagcaccagtagattgagttgggggagatggaggattgaatggaggag 1469
|||||||||||| ||||| || ||||| |||||||||||||||||||||||||||||||
Sbjct: 67 tccagtgctagaggcaccggttgattgggttgggggagatggaggattgaatggaggag 9
>gb|BZ338087.1|BZ338087 ia92h08.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ia92h08 5', DNA sequence
Length = 706
Score = 125 bits (63), Expect = 2e-026
Identities = 180/219 (82%)
Strand = Plus / Minus
Query: 250 ctaccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtc 309
|||||| ||||||||||| || ||||| | |||||||| ||||| ||||||||||||||
Sbjct: 325 ctacctcgggccggacagttcgacggccctgaggttgtaggtggagtcgacgatccagtc 266
Query: 310 attgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtc 369
||| || |||| || ||| |||||||||| || |||||| || |||||||| | ||
Sbjct: 265 gttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactgctc 206
Query: 370 ccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacg 429
||||||||| ||||||||||| || || ||||||| ||||||||| |||||||| || ||
Sbjct: 205 ccaacgctccgccagcccgtcgccctccagcatccgcaccacctctgacatcttgggccg 146
Query: 430 gtccaggggggagccctgcgtgcagaggagtgccacctg 468
|||| ||||| ||||| ||||| || || ||||||||
Sbjct: 145 ctccattggggacccctgtgtgcacagcagcgccacctg 107
Score = 48.1 bits (24), Expect = 0.003
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 505 ctgcagatctgggtccaccagcatctccaccttcttctccttca 548
|||||| || |||||||||||| ||||| ||||||||||||||
Sbjct: 70 ctgcaggtccgggtccaccagctgctccagcttcttctccttca 27
>gb|CD425877.1|CD425877 SA1_15_E03.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_15_E03_A002 3', mRNA sequence
Length = 454
Score = 125 bits (63), Expect = 2e-026
Identities = 180/219 (82%)
Strand = Plus / Minus
Query: 250 ctaccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtc 309
|||||| ||||||||||| || ||||| | ||| |||| ||||| ||||||||||||||
Sbjct: 252 ctacctcgggccggacagttcgacggccctgagggtgtaggtggagtcgacgatccagtc 193
Query: 310 attgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtc 369
||| || |||| || ||| |||||||||| || |||||| || |||||||| | |||
Sbjct: 192 gttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactggtc 133
Query: 370 ccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacg 429
||||||||| ||||||||||| || || ||||||| ||||||||| |||||||| || ||
Sbjct: 132 ccaacgctccgccagcccgtcgccctccagcatccgcaccacctctgacatcttgggccg 73
Query: 430 gtccaggggggagccctgcgtgcagaggagtgccacctg 468
|||| ||||| ||||| ||||| || || ||||||||
Sbjct: 72 ctccattggggacccctgtgtgcacagcagcgccacctg 34
>gb|CD425568.1|CD425568 SA1_13_E03.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_13_E03_A002 3', mRNA sequence
Length = 452
Score = 117 bits (59), Expect = 4e-024
Identities = 179/219 (81%)
Strand = Plus / Minus
Query: 250 ctaccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtc 309
|||||| ||||||||||| || ||||| | ||| |||| | ||| ||||||||||||||
Sbjct: 252 ctacctcgggccggacagttcgacggccctgagggtgtagggggagtcgacgatccagtc 193
Query: 310 attgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtc 369
||| || |||| || ||| |||||||||| || |||||| || |||||||| | |||
Sbjct: 192 gttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactggtc 133
Query: 370 ccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacg 429
||||||||| ||||||||||| || || ||||||| ||||||||| |||||||| || ||
Sbjct: 132 ccaacgctccgccagcccgtcgccctccagcatccgcaccacctctgacatcttgggccg 73
Query: 430 gtccaggggggagccctgcgtgcagaggagtgccacctg 468
|||| ||||| ||||| ||||| || || ||||||||
Sbjct: 72 ctccattggggacccctgtgtgcacagcagcgccacctg 34
>gb|CL172317.1|CL172317 104_374_10890057_148_31774_345 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890057, DNA
sequence
Length = 682
Score = 115 bits (58), Expect = 2e-023
Identities = 145/174 (83%)
Strand = Plus / Minus
Query: 250 ctaccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtc 309
|||||| ||||||||||| || ||||| | |||||||| ||||| ||||||||||||||
Sbjct: 190 ctacctcgggccggacagttcgacggccctgaggttgtaggtggagtcgacgatccagtc 131
Query: 310 attgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtc 369
||| || |||| || ||| |||||||||| || |||||| || |||||||| | ||
Sbjct: 130 gttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactgctc 71
Query: 370 ccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctt 423
||||||||| ||||||||||| || || ||||||| ||||||||| ||||||||
Sbjct: 70 ccaacgctccgccagcccgtcgccctccagcatccgcaccacctctgacatctt 17
>gb|BG273646.1|BG273646 OV2_28_C05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 390
Score = 113 bits (57), Expect = 7e-023
Identities = 75/81 (92%)
Strand = Plus / Minus
Query: 1511 ccagggccacaaagatttggattgttggcaaaacttataggggtgaagagtgaaaaggag 1570
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 390 ccagggccacaaaggcctggattgttggcaaaactaataggggtgaagagtgaaaaggag 331
Query: 1571 ccagtcgatgggacttgtcct 1591
|| || |||||||||||||||
Sbjct: 330 cctgttgatgggacttgtcct 310
>gb|CW021178.1|CW021178 104_109_10409392_114_30490 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10409392, DNA
sequence
Length = 714
Score = 109 bits (55), Expect = 1e-021
Identities = 85/95 (89%)
Strand = Plus / Plus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||| | |||| ||||||||||||||||||||| | |||||||||||||
Sbjct: 224 ccagtgaagttgttgaggtacaaatccaaactgaccaggttagttaagttccccagttca 283
Query: 1793 gggggtattgtcccacttatgttgttgctgtaaag 1827
|| ||||||| ||||||||||||||| ||||||||
Sbjct: 284 ggtggtattggcccacttatgttgttactgtaaag 318
>gb|CW148630.1|CW148630 104_547_11142056_116_35013_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142056, DNA
sequence
Length = 425
Score = 105 bits (53), Expect = 2e-020
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 1831 caaatattggagatttttcagctggccaagttgtggcactagaacgccagataattgtgc 1890
|||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||||
Sbjct: 157 caaatattggagatttttcagctgaccaagttgtggcactaggacaccagacaattgtgc 98
Query: 1891 atttccaaggtca 1903
|||||| ||||||
Sbjct: 97 atttccgaggtca 85
>gb|CW047861.1|CW047861 104_285_10512917_114_30216 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10512917, DNA
sequence
Length = 360
Score = 101 bits (51), Expect = 3e-019
Identities = 144/175 (82%)
Strand = Plus / Minus
Query: 974 acactcccgttagccatgtatgggtagactaacaacctttcagtaggtgtcatgcagaaa 1033
|||||||| |||||||||||||| || || | ||||| || || || |||||||||||
Sbjct: 177 acactcccattagccatgtatggatatacaagcaaccgctctgttggagtcatgcagaat 118
Query: 1034 ccacgaagtcggagaaggttcttgtgcaccgccatgctaatcatctcaacctctgtttgg 1093
||||| || || || || ||| ||||||| ||||||||||||| ||||| |||||||||
Sbjct: 117 ccacggagccgaagcagattcctgtgcactgccatgctaatcaattcaacttctgtttgg 58
Query: 1094 aactgaagctcaccaccaggtgtacgctcctcttttagtcttttcactgctacca 1148
||||| ||||| || ||||| || || ||||| |||| ||| ||||| |||||||
Sbjct: 57 aactggagctctccgccaggggtgcgttcctcctttaatctcttcaccgctacca 3
>gb|CF487114.1|CF487114 POL1_41_G11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_41_G11_A002 5', mRNA sequence
Length = 712
Score = 87.7 bits (44), Expect = 4e-015
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 1889 gcatttccaaggtcaactctgataacactgttatcgttgttacacgtaacatggaaccat 1948
||||||||||| |||||||||||||||||||| || ||||| || |||||||| |||||
Sbjct: 583 gcatttccaagatcaactctgataacactgttgtcattgttgcaggtaacatgaaaccaa 524
Query: 1949 gtacatggattaacaagagtgggatcccaact 1980
|| || || || || |||||||||||||||||
Sbjct: 523 gtgcaggggttgaccagagtgggatcccaact 492
>gb|CN138729.1|CN138729 OX1_13_C09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_C09_A002 5', mRNA sequence
Length = 770
Score = 87.7 bits (44), Expect = 4e-015
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 1889 gcatttccaaggtcaactctgataacactgttatcgttgttacacgtaacatggaaccat 1948
||||||||||| |||||||||||||||||||| || ||||| || |||||||| |||||
Sbjct: 568 gcatttccaagatcaactctgataacactgttgtcattgttgcaggtaacatgaaaccaa 509
Query: 1949 gtacatggattaacaagagtgggatcccaact 1980
|| || || || || |||||||||||||||||
Sbjct: 508 gtgcaggggttgaccagagtgggatcccaact 477
Score = 48.1 bits (24), Expect = 0.003
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 1733 ccagagaagttgttcatatacagatccaaactgaccaggttagtcaggttccccagttca 1792
|||| ||||||||||| |||| |||||||||||||| ||| || || ||||| ||||||
Sbjct: 724 ccagtgaagttgttcaggtacaaatccaaactgaccaagtttgtaagattcccaagttca 665
>gb|BE366221.1|BE366221 PI1_31_B07.b2_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 223
Score = 83.8 bits (42), Expect = 6e-014
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 2058 gtcccggccctagcagcaccgcgaccgcaaggaccaccgcccaccacctcccagccgacg 2117
||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||| ||
Sbjct: 220 gtcccggccggagcagcaccgccaccgcaaggaccaccgcccaccagctccccgccgccg 161
Query: 2118 ccgacgccgccattccaa 2135
| | |||||||| |||||
Sbjct: 160 cagccgccgccagtccaa 143
>gb|CD425663.1|CD425663 SA1_13_E03.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_13_E03_A002 5', mRNA sequence
Length = 359
Score = 81.8 bits (41), Expect = 2e-013
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 1956 gattaacaagagtgggatcccaactctgcaagacattgttagcatctttcaagctctgac 2015
||||||| ||||| |||||||||||||||| |||||||| |||||||| ||| || |
Sbjct: 359 gattaaccagagttggatcccaactctgcagcacattgttgttatctttcaggctttgcc 300
Query: 2016 gcaggctgtacagggcatcaccctcggtgttggcgac 2052
| |||||||| || ||||||||||| |||||||||||
Sbjct: 299 gtaggctgtaaagagcatcaccctccgtgttggcgac 263
>gb|CW100957.1|CW100957 104_468_11004380_148_34395_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11004380, DNA
sequence
Length = 530
Score = 67.9 bits (34), Expect = 4e-009
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1831 caaatattggagatttttcagctggccaagttgtggca 1868
|||||||||||||||||||||||| |||||||||||||
Sbjct: 493 caaatattggagatttttcagctgaccaagttgtggca 530
>gb|CW444977.1|CW444977 fsbb001f166n12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f166n12, DNA
sequence
Length = 709
Score = 65.9 bits (33), Expect = 1e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 1904 actctgataacactgttatcgttgttacacgtaacatggaaccatgtacatggattaaca 1963
||||||||||||||||| || ||||| || |||||||| ||||| || || || || ||
Sbjct: 195 actctgataacactgttgtcattgttgcaggtaacatgaaaccaagtgcaggggttgacc 254
Query: 1964 agagtgggatcccaact 1980
|||||||||||||||||
Sbjct: 255 agagtgggatcccaact 271
>gb|CW242649.1|CW242649 104_702_11219456_148_37565_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219456, DNA
sequence
Length = 761
Score = 63.9 bits (32), Expect = 6e-008
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 368 tcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctt 423
||||| |||||||| ||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 529 tcccaccgctctgcgagcccatcaccttccagcatccggaccacctccgacatctt 474
>gb|CW292550.1|CW292550 104_772_11414147_148_35583_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414147, DNA
sequence
Length = 683
Score = 63.9 bits (32), Expect = 6e-008
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 368 tcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctt 423
||||| |||||||| ||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 267 tcccaccgctctgcgagcccatcaccttccagcatccggaccacctccgacatctt 212
>gb|CW364297.1|CW364297 fsbb001f036e13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f036e13, DNA
sequence
Length = 761
Score = 63.9 bits (32), Expect = 6e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 368 tcccaacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctt 423
||||| |||||||| ||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 609 tcccaccgctctgcgagcccatcaccttccagcatccggaccacctccgacatctt 664
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 565,785
Number of Sequences: 832831
Number of extensions: 565785
Number of successful extensions: 160496
Number of sequences better than 0.5: 59
Number of HSP's better than 0.5 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 160262
Number of HSP's gapped (non-prelim): 137
length of query: 2136
length of database: 491,359,669
effective HSP length: 20
effective length of query: 2116
effective length of database: 474,703,049
effective search space: 1004471651684
effective search space used: 1004471651684
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)