BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115184.2.3
(1548 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorgh... 852 0.0
gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorgh... 771 0.0
gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorgh... 761 0.0
gb|CW146925.1|CW146925 104_540_11139246_148_34995_031 Sorgh... 359 5e-097
gb|CW346335.1|CW346335 104_849_11488970_116_36220_003 Sorgh... 349 5e-094
gb|CW072343.1|CW072343 104_325_10592215_116_30539 Sorghum m... 329 4e-088
gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methy... 143 6e-032
gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorgh... 143 6e-032
gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorgh... 143 6e-032
gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorgh... 143 6e-032
gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) So... 143 6e-032
gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) So... 143 6e-032
gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorgh... 127 3e-027
gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorgh... 127 3e-027
gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorgh... 127 3e-027
gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorgh... 127 3e-027
gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorgh... 127 3e-027
gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorgh... 127 3e-027
gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorgh... 127 3e-027
gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation... 127 3e-027
gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum b... 127 3e-027
gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum b... 127 3e-027
gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum b... 127 3e-027
gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum b... 127 3e-027
gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum b... 125 1e-026
gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum b... 125 1e-026
gb|CW328718.1|CW328718 104_825_11479460_116_36003_080 Sorgh... 121 2e-025
gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-dig... 117 3e-024
gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorgh... 117 3e-024
gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum b... 117 3e-024
gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum b... 115 1e-023
gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum b... 107 3e-021
gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sor... 100 7e-019
gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorgh... 96 1e-017
gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum b... 96 1e-017
gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sor... 94 5e-017
gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum b... 94 5e-017
gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum b... 94 5e-017
gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum b... 94 5e-017
gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum b... 94 5e-017
gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum b... 94 5e-017
gb|CF489718.1|CF489718 POL1_59_F04.b1_A002 Pollen Sorghum b... 94 5e-017
gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum b... 94 5e-017
gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum b... 92 2e-016
gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum b... 92 2e-016
gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum b... 92 2e-016
gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum b... 92 2e-016
gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum b... 90 7e-016
gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum b... 88 3e-015
gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum b... 88 3e-015
gb|CF483278.1|CF483278 POL1_21_D07.b1_A002 Pollen Sorghum b... 86 1e-014
gb|CW217188.1|CW217188 104_650_11195523_116_37129_010 Sorgh... 80 7e-013
gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum b... 80 7e-013
gb|CF484792.1|CF484792 POL1_27_B10.g1_A002 Pollen Sorghum b... 80 7e-013
gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorgh... 68 3e-009
gb|CL196651.1|CL196651 104_423_10943198_116_32330_063 Sorgh... 66 1e-008
gb|CW036659.1|CW036659 104_268_10503899_114_30381 Sorghum m... 66 1e-008
gb|CW039366.1|CW039366 104_272_10505460_114_30389 Sorghum m... 66 1e-008
gb|CF482303.1|CF482303 POL1_6_D06.b1_A002 Pollen Sorghum bi... 66 1e-008
gb|BZ422208.1|BZ422208 id51a01.b1 WGS-SbicolorF (DH5a methy... 64 4e-008
gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorgh... 64 4e-008
gb|CW217189.1|CW217189 104_650_11195523_148_37130_010 Sorgh... 64 4e-008
gb|BG323126.1|BG323126 EM1_15_B11.g1_A002 Embryo 1 (EM1) So... 64 4e-008
gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorgh... 62 2e-007
gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorgh... 62 2e-007
gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorgh... 62 2e-007
gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum m... 62 2e-007
gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorgh... 62 2e-007
gb|CW323365.1|CW323365 104_817_11476592_116_35962_024 Sorgh... 62 2e-007
gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorgh... 62 2e-007
gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation... 62 2e-007
gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation... 62 2e-007
gb|CW197885.1|CW197885 104_622_11181920_148_36831_026 Sorgh... 60 6e-007
gb|BG239833.1|BG239833 OV1_29_F03.g1_A002 Ovary 1 (OV1) Sor... 60 6e-007
gb|BG240402.1|BG240402 OV1_29_F03.b1_A002 Ovary 1 (OV1) Sor... 60 6e-007
gb|CF480663.1|CF480663 POL1_67_D09.b1_A002 Pollen Sorghum b... 60 6e-007
gb|CF481307.1|CF481307 POL1_71_E06.b1_A002 Pollen Sorghum b... 60 6e-007
gb|CF481916.1|CF481916 POL1_75_D02.b1_A002 Pollen Sorghum b... 60 6e-007
gb|CF481930.1|CF481930 POL1_75_E11.b1_A002 Pollen Sorghum b... 60 6e-007
gb|CF482926.1|CF482926 POL1_10_C07.b1_A002 Pollen Sorghum b... 60 6e-007
gb|CF485402.1|CF485402 POL1_31_G04.b1_A002 Pollen Sorghum b... 60 6e-007
gb|CF487982.1|CF487982 POL1_47_C02.b1_A002 Pollen Sorghum b... 60 6e-007
gb|CF488593.1|CF488593 POL1_51_A10.b1_A002 Pollen Sorghum b... 60 6e-007
gb|CF489359.1|CF489359 POL1_57_D04.b1_A002 Pollen Sorghum b... 60 6e-007
gb|CL196650.1|CL196650 104_423_10943198_114_32326_063 Sorgh... 58 3e-006
gb|CW039367.1|CW039367 104_272_10505460_115_30390 Sorghum m... 58 3e-006
gb|CW102281.1|CW102281 104_470_11011256_148_34413_024 Sorgh... 58 3e-006
gb|CW237483.1|CW237483 104_693_11216193_148_37517_033 Sorgh... 58 3e-006
gb|CW260257.1|CW260257 104_726_11228865_148_35188_033 Sorgh... 58 3e-006
gb|CW390139.1|CW390139 fsbb001f075k21k0 Sorghum methylation... 58 3e-006
gb|CF480194.1|CF480194 POL1_64_G08.b1_A002 Pollen Sorghum b... 58 3e-006
gb|CF481670.1|CF481670 POL1_73_G10.b1_A002 Pollen Sorghum b... 58 3e-006
gb|CF481902.1|CF481902 POL1_75_B07.b1_A002 Pollen Sorghum b... 58 3e-006
gb|CF486365.1|CF486365 POL1_37_F12.b1_A002 Pollen Sorghum b... 58 3e-006
gb|BZ422085.1|BZ422085 id49d07.b1 WGS-SbicolorF (DH5a methy... 56 1e-005
gb|CW067644.1|CW067644 104_315_10524410_115_30125 Sorghum m... 56 1e-005
gb|CW097816.1|CW097816 104_464_11002670_116_34361_061 Sorgh... 56 1e-005
gb|CW097817.1|CW097817 104_464_11002670_148_34365_061 Sorgh... 56 1e-005
gb|CW179407.1|CW179407 104_593_11160083_148_36629_040 Sorgh... 56 1e-005
gb|CW208653.1|CW208653 104_638_11188789_148_36982_059 Sorgh... 56 1e-005
gb|CW220245.1|CW220245 104_654_11197249_148_37146_001 Sorgh... 56 1e-005
gb|CW233308.1|CW233308 104_686_11213332_116_37372_008 Sorgh... 56 1e-005
gb|CW233309.1|CW233309 104_686_11213332_148_37371_008 Sorgh... 56 1e-005
gb|CW245685.1|CW245685 104_706_11221077_116_35078_085 Sorgh... 56 1e-005
gb|CW245686.1|CW245686 104_706_11221077_148_35074_085 Sorgh... 56 1e-005
gb|CW245687.1|CW245687 104_706_11221077_148_37594_085 Sorgh... 56 1e-005
gb|CW345745.1|CW345745 104_849_11488663_116_36213_032 Sorgh... 56 1e-005
gb|CW345746.1|CW345746 104_849_11488663_148_36214_032 Sorgh... 56 1e-005
gb|CW405409.1|CW405409 fsbb001f097p05f0 Sorghum methylation... 56 1e-005
gb|CW421378.1|CW421378 fsbb001f130c19k0 Sorghum methylation... 56 1e-005
gb|CW470062.1|CW470062 fsbb001f223b09f0 Sorghum methylation... 56 1e-005
gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) So... 56 1e-005
gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorgh... 54 4e-005
gb|CW194907.1|CW194907 104_618_11180352_116_36796_092 Sorgh... 54 4e-005
gb|CW194908.1|CW194908 104_618_11180352_148_36800_092 Sorgh... 54 4e-005
gb|CW231978.1|CW231978 104_681_11211414_116_37346_023 Sorgh... 54 4e-005
gb|CW412966.1|CW412966 fsbb001f108o03f0 Sorghum methylation... 52 2e-004
gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum b... 52 2e-004
gb|CF481619.1|CF481619 POL1_73_B09.b1_A002 Pollen Sorghum b... 52 2e-004
gb|CF486155.1|CF486155 POL1_36_C04.b1_A002 Pollen Sorghum b... 52 2e-004
gb|CW145709.1|CW145709 104_538_11138608_148_34981_058 Sorgh... 50 6e-004
gb|CL191437.1|CL191437 104_410_10906802_116_32537_007 Sorgh... 48 0.002
gb|CW086368.1|CW086368 104_430_10946932_116_33018_012 Sorgh... 48 0.002
gb|CW181409.1|CW181409 104_596_11163492_116_36654_042 Sorgh... 48 0.002
gb|CW320260.1|CW320260 104_813_11474922_116_35901_077 Sorgh... 48 0.002
gb|CW320261.1|CW320261 104_813_11474922_148_35897_077 Sorgh... 48 0.002
gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorgh... 48 0.002
gb|CW369343.1|CW369343 fsbb001f043l11k0 Sorghum methylation... 48 0.002
gb|CF480280.1|CF480280 POL1_64_G01.g1_A002 Pollen Sorghum b... 48 0.002
gb|BH246024.1|BH246024 pSB1633.2 S. bicolor BTx623 PstI-dig... 46 0.010
gb|CW232351.1|CW232351 104_685_11212772_148_37363_080 Sorgh... 46 0.010
gb|CW319700.1|CW319700 104_812_11474625_148_35892_041 Sorgh... 46 0.010
gb|CW463314.1|CW463314 fsbb001f211n16f0 Sorghum methylation... 46 0.010
gb|CW469589.1|CW469589 fsbb001f222g06f0 Sorghum methylation... 46 0.010
gb|BI098442.1|BI098442 IP1_32_D12.b1_A002 Immature pannicle... 46 0.010
gb|CW032166.1|CW032166 104_261_10501225_114_30363 Sorghum m... 44 0.038
gb|CW133225.1|CW133225 104_516_11116645_116_34806_049 Sorgh... 44 0.038
gb|CW181410.1|CW181410 104_596_11163492_148_36653_042 Sorgh... 44 0.038
gb|CW231979.1|CW231979 104_681_11211414_148_37350_023 Sorgh... 44 0.038
gb|CW264408.1|CW264408 104_733_11231276_116_35256_078 Sorgh... 44 0.038
gb|CW369157.1|CW369157 fsbb001f043h04f0 Sorghum methylation... 44 0.038
gb|CW390138.1|CW390138 fsbb001f075k21f0 Sorghum methylation... 44 0.038
gb|CW394746.1|CW394746 fsbb001f082h21k0 Sorghum methylation... 44 0.038
gb|BF587798.1|BF587798 FM1_40_F09.g1_A003 Floral-Induced Me... 44 0.038
gb|CF481922.1|CF481922 POL1_75_D09.b1_A002 Pollen Sorghum b... 44 0.038
gb|CL175908.1|CL175908 104_381_10892772_148_31764_372 Sorgh... 42 0.15
gb|CW050592.1|CW050592 104_290_10514748_115_30205 Sorghum m... 42 0.15
gb|CW054380.1|CW054380 104_295_10516495_114_30181 Sorghum m... 42 0.15
gb|CW191731.1|CW191731 104_613_11178652_148_36941_002 Sorgh... 42 0.15
gb|CW328958.1|CW328958 104_825_11479582_148_36001_091 Sorgh... 42 0.15
gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation... 42 0.15
gb|CF430289.1|CF430289 PH1_27_G01.b1_A002 Phosphorous-defic... 42 0.15
>gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480239, DNA
sequence
Length = 729
Score = 852 bits (430), Expect = 0.0
Identities = 622/686 (90%)
Strand = Plus / Minus
Query: 262 ttcagatgcaggcgagctcctttgccaagccgatggacttgccgatggcgttcttgcaga 321
|||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 686 ttcagatgcacgcgagctcctttgacaagccgaaggacttgccgacggcgttcttgcaga 627
Query: 322 cggccatggtcttgttgccggatccattgtacttgatgtcgacgttgacgagctgcacgc 381
||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||
Sbjct: 626 cggccatggtcttgttgttggacttgttgtacttgatgtcgacgttgtggagctgcacgc 567
Query: 382 cctggcatggcaggttgttggcgcagttgagcgtgatggcctccggcgtgttggaggtgc 441
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 566 cctggcatggcaggttgtcggcgcagttgagcgtgatggcctcgggcgtgttggaggtgc 507
Query: 442 cgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccggacttgacgc 501
|||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 506 cgtggatgttcttgaagacgacgtcggtgacggccaccttggacgcgccggacctgacgc 447
Query: 502 agatgttgttggggcagtacttctggtcgatgatgatggggtaggagacattgtccatgg 561
|||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 446 agatgttgttcgggcagtacttctggtcgatgatgatcgggtacgagacgttgtccatgg 387
Query: 562 tgatgccctcgtacaggaacttgctggccttgagcgacgacttggagtcctcgtacgact 621
| | | ||||||||| ||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 386 tcacgtcctcgtacacgaacttggtgaccttgggcgacgacttggagtcctcgtacgact 327
Query: 622 tgatgcgcaggccgttcgtggtgccggcgatcgtgcaccccgtcacctgcacgtcttcca 681
|||||||||||||||| |||||||| | | |||||| || |||||| |||||| ||||
Sbjct: 326 tgatgcgcaggccgttggtggtgcccaccagcgtgcaacctttcaccttcacgtcctcca 267
Query: 682 cgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccgc 741
||||||||||||||||||| | ||||||||| |||||||||||||||||||| |||||||
Sbjct: 266 cgtccttctcgtccttgtacctccccaggctcccgacgctgatgccgtggccggggccgc 207
Query: 742 acttgacgccatggatgcggatcatcttgctcccggggccgatggagatgcagtcgtcgc 801
|||||||||| | ||| |||||| ||||||| ||||| ||||||||||||||||||||||
Sbjct: 206 acttgacgccgtcgatccggatcgtcttgctgccgggcccgatggagatgcagtcgtcgc 147
Query: 802 cgacgccgatggtggtgctgctgatggtcacgttgctggagtcgccgatgtggatgccgt 861
|||||||||||||||||| ||||||||||||||| ||||| || |||||||| ||||
Sbjct: 146 cgacgccgatggtggtgccgctgatggtcacgttctcagagtcccccatgtggattccgt 87
Query: 862 ccgtgttggggctgtcgccgggggccttgaccgtcactttgtcgatcagcacgttcttgc 921
||||||||||||||| || |||||||| |||||||| |||||||||| |||||||||||
Sbjct: 86 ccgtgttggggctgttccccggggccttcaccgtcaccttgtcgatcaacacgttcttgc 27
Query: 922 actcgaagatgttgaggtggaagaac 947
| |||||||||||||||||||||||
Sbjct: 26 tcgcgaagatgttgaggtggaagaac 1
>gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480239, DNA
sequence
Length = 728
Score = 771 bits (389), Expect = 0.0
Identities = 577/637 (90%), Gaps = 2/637 (0%)
Strand = Plus / Plus
Query: 262 ttcagatgcaggcgagctcctttgccaagccgatggacttgccgatggcgttcttgcaga 321
|||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 91 ttcagatgcacgcgagctcctttgacaagccgaaggacttgccgacggcgttcttgcaga 150
Query: 322 cggccatggtcttgttgccggatccattgtacttgatgtcgacgttgacgagctgcacgc 381
||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||
Sbjct: 151 cggccatggtcttgttgttggacttgttgtacttgatgtcgacgttgtggagctgcacgc 210
Query: 382 cctggcatggcaggttgttggcgcagttgagcgtgatggcctccggcgtgttggaggtgc 441
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 211 cctggcatggcaggttgtcggcgcagttgagcgtgatggcctcgggcgtgttggaggtgc 270
Query: 442 cgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccggacttgacgc 501
|||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 271 cgtggatgttcttgaagacgacgtcggtgacggccaccttggacgcgccggacctgacgc 330
Query: 502 agatgttgttggggcagtacttctggtcgatgatgatggggtaggagacattgtccatgg 561
|||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 331 agatgttgttcgggcagtacttctggtcgatgatgatcgggtacgagacgttgtccatgg 390
Query: 562 tgatgccctcgtacaggaacttgctggccttgagcgacgacttggagtcctcgtacgact 621
| | | ||||||||| ||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 391 tcacgtcctcgtacacgaacttggtgaccttgggcgacgacttggagtcctcgtacgact 450
Query: 622 tgatgcgcaggccgttcgtggtgccggcgatcgtgcaccccgtcacctgcacgtcttcca 681
|||||||||||||||| |||||||| | | |||||| || |||||| |||||| ||||
Sbjct: 451 tgatgcgcaggccgttggtggtgcccaccagcgtgcaacctttcaccttcacgtcctcca 510
Query: 682 cgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccgc 741
||||||||||||||||||| | ||||||||| |||||||||||||||||||| |||||||
Sbjct: 511 cgtccttctcgtccttgtacctccccaggctcccgacgctgatgccgtggccggggccgc 570
Query: 742 acttgacgccatggatgcggatcatcttgctcccggggccgatggagatgcagtcgtcgc 801
|||||||||| | ||| |||||| ||||||| ||||| ||||||||||||||||||||||
Sbjct: 571 acttgacgccgtcgatccggatcgtcttgctgccgggcccgatggagatgcagtcgtcgc 630
Query: 802 cgacgccgatggtggtgctgctgatggtcacgttgctggagtcgccgatgtggatgccgt 861
|||||||||||||||||| ||||||||||||||| ||||| || |||||||| ||||
Sbjct: 631 cgacgccgatggtggtgccgctgatggtcacgttctcagagtc-cccatgtggattccgt 689
Query: 862 ccgtgttggggctgtcgccgggggccttgaccgtcac 898
||||||||||||||| || |||||||| ||||||||
Sbjct: 690 ccgtgttggggctgt-tcccggggccttcaccgtcac 725
>gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164002, DNA
sequence
Length = 608
Score = 761 bits (384), Expect = 0.0
Identities = 546/600 (91%)
Strand = Plus / Minus
Query: 348 ttgtacttgatgtcgacgttgacgagctgcacgccctggcatggcaggttgttggcgcag 407
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 600 ttgtacttgatgtcgacgttgtggagctgcacgccctggcatggcaggttgtcggcgcag 541
Query: 408 ttgagcgtgatggcctccggcgtgttggaggtgccgtggatgttcttgaagacgacgtcg 467
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttgagcgtgatggcctcgggcgtgttggaggtgccgtggatgttcttgaagacgacgtcg 481
Query: 468 ttgacggccaccttggaggcgccggacttgacgcagatgttgttggggcagtacttctgg 527
|||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 480 gtgacggccaccttggacgcgccggacctgacgcagatgttgttcgggcagtacttctgg 421
Query: 528 tcgatgatgatggggtaggagacattgtccatggtgatgccctcgtacaggaacttgctg 587
||||||||||| ||||| ||||| ||||||||||| | | ||||||||| ||||||| ||
Sbjct: 420 tcgatgatgatcgggtacgagacgttgtccatggtcacgtcctcgtacacgaacttggtg 361
Query: 588 gccttgagcgacgacttggagtcctcgtacgacttgatgcgcaggccgttcgtggtgccg 647
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 360 accttgggcgacgacttggagtcctcgtacgacttgatgcgcaggccgttggtggtgccc 301
Query: 648 gcgatcgtgcaccccgtcacctgcacgtcttccacgtccttctcgtccttgtagcgcccc 707
| | |||||| || |||||| |||||| ||||||||||||||||||||||| | ||||
Sbjct: 300 accagcgtgcaacctttcaccttcacgtcctccacgtccttctcgtccttgtacctcccc 241
Query: 708 aggctgccgacgctgatgccgtggcctgggccgcacttgacgccatggatgcggatcatc 767
||||| |||||||||||||||||||| ||||||||||||||||| | ||| |||||| ||
Sbjct: 240 aggctcccgacgctgatgccgtggccggggccgcacttgacgccgtcgatccggatcgtc 181
Query: 768 ttgctcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatg 827
||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 180 ttgctgccgggcccgatggagatgcagtcgtcgccgacgccgatggtggtgccgctgatg 121
Query: 828 gtcacgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggcc 887
|||||||| ||||| || |||||||| ||||||||||||||||||| || ||||||
Sbjct: 120 gtcacgttctcagagtcccccatgtggattccgtccgtgttggggctgttccccggggcc 61
Query: 888 ttgaccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaac 947
|| |||||||| |||||||||| ||||||||||| | |||||||||||||||||||||||
Sbjct: 60 ttcaccgtcaccttgtcgatcaacacgttcttgctcgcgaagatgttgaggtggaagaac 1
>gb|CW146925.1|CW146925 104_540_11139246_148_34995_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139246, DNA
sequence
Length = 325
Score = 359 bits (181), Expect = 5e-097
Identities = 205/213 (96%)
Strand = Plus / Plus
Query: 1153 tgaggtcgccggtgccgagcaggttgccgtcgagacggatgatgatggaggacttgcagg 1212
|||||||||||||||||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 5 tgaggtcgccggtgccgagcaggttgccttcaaggcggatgatgatggaggacttgcagg 64
Query: 1213 ggcccttcagctccagcccgcccgtcaggtagttgcccggcgggatgacgatcttctgta 1272
||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 65 ggcccttgagctccagcccgcccgtcaggtagttgcccggctggatgacgatcttctgca 124
Query: 1273 cccccgtcgcctcgcacgcgttcttccacgccttgaggatcatcggggtgctgtccgact 1332
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ccccggtcgcgtcgcacgcgttcttccacgccttgaggatcatcggggtgctgtccgact 184
Query: 1333 tgccgtcgcccttggcgcccagctgcgcgatgt 1365
|||||||||||||||||||||||||||||||||
Sbjct: 185 tgccgtcgcccttggcgcccagctgcgcgatgt 217
>gb|CW346335.1|CW346335 104_849_11488970_116_36220_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488970, DNA
sequence
Length = 658
Score = 349 bits (176), Expect = 5e-094
Identities = 227/244 (93%)
Strand = Plus / Minus
Query: 262 ttcagatgcaggcgagctcctttgccaagccgatggacttgccgatggcgttcttgcaga 321
|||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 244 ttcagatgcacgcgagctcctttgacaagccgaaggacttgccgacggcgttcttgcaga 185
Query: 322 cggccatggtcttgttgccggatccattgtacttgatgtcgacgttgacgagctgcacgc 381
||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||
Sbjct: 184 cggccatggtcttgttgttggacttgttgtacttgatgtcgacgttgtggagctgcacgc 125
Query: 382 cctggcatggcaggttgttggcgcagttgagcgtgatggcctccggcgtgttggaggtgc 441
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 124 cctggcatggcaggttgtcggcgcagttgagcgtgatggcctcgggcgtgttggaggtgc 65
Query: 442 cgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccggacttgacgc 501
|||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 64 cgtggatgttcttgaagacgacgtcggtgacggccaccttggacgcgccggacctgacgc 5
Query: 502 agat 505
||||
Sbjct: 4 agat 1
>gb|CW072343.1|CW072343 104_325_10592215_116_30539 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592215, DNA
sequence
Length = 344
Score = 329 bits (166), Expect = 4e-088
Identities = 187/194 (96%)
Strand = Plus / Minus
Query: 1172 caggttgccgtcgagacggatgatgatggaggacttgcaggggcccttcagctccagccc 1231
||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 344 caggttgccgtggaggcggatgatgatggaggacttgcaggggcccttgagctccagccc 285
Query: 1232 gcccgtcaggtagttgcccggcgggatgacgatcttctgtacccccgtcgcctcgcacgc 1291
||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 284 gcccgtcaggtagttgcccggtgggatgacgatcttctgcaccccggtcgcgtcgcacgc 225
Query: 1292 gttcttccacgccttgaggatcatcggggtgctgtccgacttgccgtcgcccttggcgcc 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gttcttccacgccttgaggatcatcggggtgctgtccgacttgccgtcgcccttggcgcc 165
Query: 1352 cagctgcgcgatgt 1365
||||||||||||||
Sbjct: 164 cagctgcgcgatgt 151
>gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id51c01 5', DNA sequence
Length = 574
Score = 143 bits (72), Expect = 6e-032
Identities = 168/200 (84%)
Strand = Plus / Minus
Query: 684 tccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||| |||||||| | ||||||||||||||||||||||||||||| || |||||
Sbjct: 314 tccttctcatccttgtacctgcccaggctgccgacgctgatgccgtggccgggcccgcag 255
Query: 744 ttgacgccatggatgcggatcatcttgctcccggggccgatggagatgcagtcgtcgccg 803
||||||| || | |||| |||| || ||||||||||||||||||||||| ||
Sbjct: 254 gtgacgccggtgacgttgatcccggtgctgccagggccgatggagatgcagtcgtcaccc 195
Query: 804 acgccgatggtggtgctgctgatggtcacgttgctggagtcgccgatgtggatgccgtcc 863
|||||||||||||||| | ||||||| || ||| |||||| || ||||||||||||||
Sbjct: 194 acgccgatggtggtgccggtgatggtgaccttggaggagtcaccaatgtggatgccgtcg 135
Query: 864 gtgttggggctgtcgccggg 883
|||||||||||||| |||||
Sbjct: 134 gtgttggggctgtccccggg 115
Score = 63.9 bits (32), Expect = 4e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 500 gcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
|||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 498 gcagatcttgttggggcagtacttcatgtcgatgatgatggggt 455
>gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 699
Score = 143 bits (72), Expect = 6e-032
Identities = 168/200 (84%)
Strand = Plus / Minus
Query: 684 tccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||| |||||||| | ||||||||||||||||||||||||||||| || |||||
Sbjct: 386 tccttctcatccttgtacctgcccaggctgccgacgctgatgccgtggccgggcccgcag 327
Query: 744 ttgacgccatggatgcggatcatcttgctcccggggccgatggagatgcagtcgtcgccg 803
||||||| || | |||| |||| || ||||||||||||||||||||||| ||
Sbjct: 326 gtgacgccggtgacgttgatcccggtgctgccagggccgatggagatgcagtcgtcaccc 267
Query: 804 acgccgatggtggtgctgctgatggtcacgttgctggagtcgccgatgtggatgccgtcc 863
|||||||||||||||| | ||||||| || ||| |||||| || ||||||||||||||
Sbjct: 266 acgccgatggtggtgccggtgatggtgaccttggaggagtcaccaatgtggatgccgtcg 207
Query: 864 gtgttggggctgtcgccggg 883
|||||||||||||| |||||
Sbjct: 206 gtgttggggctgtccccggg 187
Score = 63.9 bits (32), Expect = 4e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 500 gcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
|||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 570 gcagatcttgttggggcagtacttcatgtcgatgatgatggggt 527
>gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402626, DNA
sequence
Length = 671
Score = 143 bits (72), Expect = 6e-032
Identities = 168/200 (84%)
Strand = Plus / Minus
Query: 684 tccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||| |||||||| | ||||||||||||||||||||||||||||| || |||||
Sbjct: 389 tccttctcatccttgtacctgcccaggctgccgacgctgatgccgtggccgggcccgcag 330
Query: 744 ttgacgccatggatgcggatcatcttgctcccggggccgatggagatgcagtcgtcgccg 803
||||||| || | |||| |||| || ||||||||||||||||||||||| ||
Sbjct: 329 gtgacgccggtgacgttgatcccggtgctgccagggccgatggagatgcagtcgtcaccc 270
Query: 804 acgccgatggtggtgctgctgatggtcacgttgctggagtcgccgatgtggatgccgtcc 863
|||||||||||||||| | ||||||| || ||| |||||| || ||||||||||||||
Sbjct: 269 acgccgatggtggtgccggtgatggtgaccttggaggagtcaccaatgtggatgccgtcg 210
Query: 864 gtgttggggctgtcgccggg 883
|||||||||||||| |||||
Sbjct: 209 gtgttggggctgtccccggg 190
Score = 63.9 bits (32), Expect = 4e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 500 gcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
|||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 573 gcagatcttgttggggcagtacttcatgtcgatgatgatggggt 530
>gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476592, DNA
sequence
Length = 680
Score = 143 bits (72), Expect = 6e-032
Identities = 168/200 (84%)
Strand = Plus / Plus
Query: 684 tccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||| |||||||| | ||||||||||||||||||||||||||||| || |||||
Sbjct: 80 tccttctcatccttgtacctgcccaggctgccgacgctgatgccgtggccgggcccgcag 139
Query: 744 ttgacgccatggatgcggatcatcttgctcccggggccgatggagatgcagtcgtcgccg 803
||||||| || | |||| |||| || ||||||||||||||||||||||| ||
Sbjct: 140 gtgacgccggtgacgttgatcccggtgctgccagggccgatggagatgcagtcgtcaccc 199
Query: 804 acgccgatggtggtgctgctgatggtcacgttgctggagtcgccgatgtggatgccgtcc 863
|||||||||||||||| | ||||||| || ||| |||||| || ||||||||||||||
Sbjct: 200 acgccgatggtggtgccggtgatggtgaccttggaggagtcaccaatgtggatgccgtcg 259
Query: 864 gtgttggggctgtcgccggg 883
|||||||||||||| |||||
Sbjct: 260 gtgttggggctgtccccggg 279
Score = 58.0 bits (29), Expect = 3e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 1071 ccctgcccgtcgatggtgccgtggccgttgatggacaggttctcgacgttctcgatctcg 1130
||||| ||||||| |||||| | |||| ||||| ||||| ||||||| ||||||||||
Sbjct: 584 ccctggccgtcgagggtgcctttgccgctgatgacaaggttgtcgacgtgctcgatctcg 643
Query: 1131 atccagttcctttggtacgcgctgaggtc 1159
|||||||| | | ||||||||| |||||
Sbjct: 644 atccagttggtcttgtacgcgctcaggtc 672
>gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 143 bits (72), Expect = 6e-032
Identities = 168/200 (84%)
Strand = Plus / Minus
Query: 684 tccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||| |||||||| | ||||||||||||||||||||||||||||| || |||||
Sbjct: 230 tccttctcatccttgtacctgcccaggctgccgacgctgatgccgtggccgggcccgcag 171
Query: 744 ttgacgccatggatgcggatcatcttgctcccggggccgatggagatgcagtcgtcgccg 803
||||||| || | |||| |||| || ||||||||||||||||||||||| ||
Sbjct: 170 gtgacgccggtgacgttgatcccggtgctgccagggccgatggagatgcagtcgtcaccc 111
Query: 804 acgccgatggtggtgctgctgatggtcacgttgctggagtcgccgatgtggatgccgtcc 863
|||||||||||||||| | ||||||| || ||| |||||| || ||||||||||||||
Sbjct: 110 acgccgatggtggtgccggtgatggtgaccttggaggagtcaccaatgtggatgccgtcg 51
Query: 864 gtgttggggctgtcgccggg 883
|||||||||||||| |||||
Sbjct: 50 gtgttggggctgtccccggg 31
Score = 63.9 bits (32), Expect = 4e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 500 gcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
|||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 414 gcagatcttgttggggcagtacttcatgtcgatgatgatggggt 371
>gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 522
Score = 143 bits (72), Expect = 6e-032
Identities = 168/200 (84%)
Strand = Plus / Minus
Query: 684 tccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||| |||||||| | ||||||||||||||||||||||||||||| || |||||
Sbjct: 230 tccttctcatccttgtacctgcccaggctgccgacgctgatgccgtggccgggcccgcag 171
Query: 744 ttgacgccatggatgcggatcatcttgctcccggggccgatggagatgcagtcgtcgccg 803
||||||| || | |||| |||| || ||||||||||||||||||||||| ||
Sbjct: 170 gtgacgccggtgacgttgatcccggtgctgccagggccgatggagatgcagtcgtcaccc 111
Query: 804 acgccgatggtggtgctgctgatggtcacgttgctggagtcgccgatgtggatgccgtcc 863
|||||||||||||||| | ||||||| || ||| |||||| || ||||||||||||||
Sbjct: 110 acgccgatggtggtgccggtgatggtgaccttggaggagtcaccaatgtggatgccgtcg 51
Query: 864 gtgttggggctgtcgccggg 883
|||||||||||||| |||||
Sbjct: 50 gtgttggggctgtccccggg 31
Score = 63.9 bits (32), Expect = 4e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 500 gcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
|||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 414 gcagatcttgttggggcagtacttcatgtcgatgatgatggggt 371
>gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 641
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 78 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 137
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 138 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 197
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 198 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 257
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 258 cgtttagcagcgtgat 273
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 695 cttgtagcgccccaggctgccgacgctgatgccgtggcctgggccgcacttgacgcc 751
|||||| |||||||||||||||| ||||||||| ||||| |||||||| |||||||
Sbjct: 1 cttgtaccgccccaggctgccgatgctgatgccatggccggggccgcatgtgacgcc 57
>gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 526
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 272 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 331
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 332 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 391
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 392 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 451
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 452 cgtttagcagcgtgat 467
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 181 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 240
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 241 catgtgacgcc 251
>gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402872, DNA
sequence
Length = 709
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 339 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 280
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 279 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 220
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 219 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 160
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 159 cgtttagcagcgtgat 144
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 430 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 371
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 370 catgtgacgcc 360
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 500 gcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
|||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 611 gcagattttgttagggcagtacttcatgtcgatgataatggggt 568
>gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 701
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 634 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 575
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 574 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 515
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 514 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 455
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 454 cgtttagcagcgtgat 439
Score = 46.1 bits (23), Expect = 0.010
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 705 cccaggctgccgacgctgatgccgtggcctgggccgcacttgacgcc 751
||||||||||||| ||||||||| || || |||||||| |||||||
Sbjct: 701 cccaggctgccgatgctgatgccatgcccggggccgcatgtgacgcc 655
>gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 614
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 165 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 224
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 225 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 284
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 285 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 344
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 345 cgtttagcagcgtgat 360
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 74 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 133
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 134 catgtgacgcc 144
>gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470780, DNA
sequence
Length = 675
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 4 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 63
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 64 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 123
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 124 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 183
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 184 cgtttagcagcgtgat 199
>gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476800, DNA
sequence
Length = 622
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 54 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 113
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 114 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 173
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 174 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 233
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 234 cgtttagcagcgtgat 249
>gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179g22, DNA
sequence
Length = 403
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Plus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 6 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 65
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 66 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 125
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 126 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 185
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 186 cgtttagcagcgtgat 201
>gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 5', mRNA sequence
Length = 691
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 626 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 567
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 566 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 507
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 506 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 447
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 446 cgtttagcagcgtgat 431
>gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 5', mRNA sequence
Length = 692
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 491 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 432
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 431 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 372
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 371 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 312
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 311 cgtttagcagcgtgat 296
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 582 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 523
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 522 catgtgacgcc 512
>gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_10_C07_A002 5', mRNA sequence
Length = 768
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 711 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 652
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 651 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 592
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 591 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 532
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 531 cgtttagcagcgtgat 516
>gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 5', mRNA sequence
Length = 715
Score = 127 bits (64), Expect = 3e-027
Identities = 163/196 (83%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 653 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 594
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 593 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 534
Query: 892 ccgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgc 951
||||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 533 ccgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttgg 474
Query: 952 tgttgagcagcgtgat 967
||| |||||||||||
Sbjct: 473 cgtttagcagcgtgat 458
>gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 5', mRNA sequence
Length = 742
Score = 125 bits (63), Expect = 1e-026
Identities = 162/195 (83%)
Strand = Plus / Minus
Query: 773 cccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtcac 832
|||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||
Sbjct: 742 cccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtgac 683
Query: 833 gttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgac 892
| |||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 682 cccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtgac 623
Query: 893 cgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgct 952
|||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 622 cgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttggc 563
Query: 953 gttgagcagcgtgat 967
||| |||||||||||
Sbjct: 562 gtttagcagcgtgat 548
>gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_B02_A002 5', mRNA sequence
Length = 733
Score = 125 bits (63), Expect = 1e-026
Identities = 162/195 (83%)
Strand = Plus / Minus
Query: 773 cccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtcac 832
|||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||
Sbjct: 733 cccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtgac 674
Query: 833 gttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgac 892
| |||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 673 cccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtgac 614
Query: 893 cgtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgct 952
|||||| | | |||| || || |||||||| ||| | ||| | |||||||||||||
Sbjct: 613 cgtcacatccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttggc 554
Query: 953 gttgagcagcgtgat 967
||| |||||||||||
Sbjct: 553 gtttagcagcgtgat 539
>gb|CW328718.1|CW328718 104_825_11479460_116_36003_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479460, DNA
sequence
Length = 686
Score = 121 bits (61), Expect = 2e-025
Identities = 73/77 (94%)
Strand = Plus / Minus
Query: 262 ttcagatgcaggcgagctcctttgccaagccgatggacttgccgatggcgttcttgcaga 321
|||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 88 ttcagatgcacgcgagctcctttgacaagccgaaggacttgccgacggcgttcttgcaga 29
Query: 322 cggccatggtcttgttg 338
|||||||||||||||||
Sbjct: 28 cggccatggtcttgttg 12
>gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB1633 similar to PG gene
for polygalacturonase (X66422), DNA sequence
Length = 479
Score = 117 bits (59), Expect = 3e-024
Identities = 149/179 (83%)
Strand = Plus / Plus
Query: 684 tccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||| |||||||| | ||||||||||||||||||||||||||||| || |||||
Sbjct: 301 tccttctcatccttgtacctgcccaggctgccgacgctgatgccgtggccgggcccgcag 360
Query: 744 ttgacgccatggatgcggatcatcttgctcccggggccgatggagatgcagtcgtcgccg 803
||||||| || | |||| |||| || ||||||||||||||||||||||| ||
Sbjct: 361 gtgacgccggtgacgttgatcccggtgctgccagggccgatggagatgcagtcgtcaccc 420
Query: 804 acgccgatggtggtgctgctgatggtcacgttgctggagtcgccgatgtggatgccgtc 862
|||||||||||||||| | ||||||| || ||| |||||| || ||||||||||||||
Sbjct: 421 acgccgatggtggtgccggtgatggtgaccttggaggagtcaccaatgtggatgccgtc 479
Score = 63.9 bits (32), Expect = 4e-008
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 500 gcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
|||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 117 gcagatcttgttggggcagtacttcatgtcgatgatgatggggt 160
>gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218937, DNA
sequence
Length = 656
Score = 117 bits (59), Expect = 3e-024
Identities = 110/127 (86%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 178 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 119
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 118 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 59
Query: 892 ccgtcac 898
|||||||
Sbjct: 58 ccgtcac 52
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 269 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 210
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 209 catgtgacgcc 199
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 434 ggaggtgccgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccgga 493
|||||||||| || |||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 516 ggaggtgccggtgacgttcttgaaggagacgtccttgacggtgaccttggaggcgccgct 457
Query: 494 cttgacgcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
| |||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 456 ggcggtgcagattttgttagggcagtacttcatgtcgatgataatggggt 407
>gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 5', mRNA sequence
Length = 663
Score = 117 bits (59), Expect = 3e-024
Identities = 110/127 (86%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 387 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 328
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttga 891
| | |||||||| ||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 327 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtga 268
Query: 892 ccgtcac 898
|||||||
Sbjct: 267 ccgtcac 261
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 478 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 419
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 418 catgtgacgcc 408
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 500 gcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
|||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 659 gcagattttgttagggcagtacttcatgtcgatgataatggggt 616
>gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D09_A002 5', mRNA sequence
Length = 748
Score = 115 bits (58), Expect = 1e-023
Identities = 109/126 (86%)
Strand = Plus / Minus
Query: 773 cccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtcac 832
|||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||
Sbjct: 748 cccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtgac 689
Query: 833 gttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgac 892
| |||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 688 cccggacgagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtgac 629
Query: 893 cgtcac 898
||||||
Sbjct: 628 cgtcac 623
>gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_E07_A002 5', mRNA sequence
Length = 699
Score = 107 bits (54), Expect = 3e-021
Identities = 153/186 (82%)
Strand = Plus / Minus
Query: 782 gatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtcacgttgctgga 841
||||||||||||||||||||||||||||||| |||| | |||||| || | ||
Sbjct: 699 gatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtgaccccggacga 640
Query: 842 gtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgaccgtcacttt 901
|||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||||| |
Sbjct: 639 gtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtgaccgtcacatc 580
Query: 902 gtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgctgttgagcag 961
| |||| || || |||||||| ||| | ||| | ||||||||||||| ||| |||||
Sbjct: 579 cttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttggcgtttagcag 520
Query: 962 cgtgat 967
||||||
Sbjct: 519 cgtgat 514
>gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 459
Score = 99.6 bits (50), Expect = 7e-019
Identities = 92/106 (86%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtca 831
||||||||||||||||||||||||||||||||||||||||| |||| | |||||| |
Sbjct: 115 tcccggggccgatggagatgcagtcgtcgccgacgccgatgacggtgttctcgatggtga 56
Query: 832 cgttgctggagtcgccgatgtggatgccgtccgtgttggggctgtc 877
| | |||||||| |||||||||||||||||||||||||||||
Sbjct: 55 ccccggacgagtcgcccatgtggatgccgtccgtgttggggctgtc 10
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 206 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 147
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 146 catgtgacgcc 136
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 434 ggaggtgccgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccgga 493
|||||||||| || |||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 453 ggaggtgccggtgacgttcttgaaggagacgtccttgacggtgaccttggaggcgccgct 394
Query: 494 cttgacgcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
| |||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 393 ggcggtgcagattttgttagggcagtacttcatgtcgatgataatggggt 344
>gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 725
Score = 95.6 bits (48), Expect = 1e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 840 gagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgaccgtcact 899
|||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||
Sbjct: 675 gagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtgaccgtcaca 616
Query: 900 ttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgctgttgagc 959
| | |||| || || |||||||| ||| | ||| | ||||||||||||| ||| |||
Sbjct: 615 tccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttggcgtttagc 556
Query: 960 agcgtgat 967
||||||||
Sbjct: 555 agcgtgat 548
>gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_D07_A002 5', mRNA sequence
Length = 709
Score = 95.6 bits (48), Expect = 1e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 840 gagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgaccgtcact 899
|||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||
Sbjct: 691 gagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtgaccgtcaca 632
Query: 900 ttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgctgttgagc 959
| | |||| || || |||||||| ||| | ||| | ||||||||||||| ||| |||
Sbjct: 631 tccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttggcgtttagc 572
Query: 960 agcgtgat 967
||||||||
Sbjct: 571 agcgtgat 564
>gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_37_F12_A002 5', mRNA sequence
Length = 719
Score = 95.6 bits (48), Expect = 1e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 840 gagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgaccgtcact 899
|||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||
Sbjct: 683 gagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtgaccgtcaca 624
Query: 900 ttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgctgttgagc 959
| | |||| || || |||||||| ||| | ||| | ||||||||||||| ||| |||
Sbjct: 623 tccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttggcgtttagc 564
Query: 960 agcgtgat 967
||||||||
Sbjct: 563 agcgtgat 556
>gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_D04_A002 5', mRNA sequence
Length = 711
Score = 95.6 bits (48), Expect = 1e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 840 gagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgaccgtcact 899
|||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||
Sbjct: 677 gagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtgaccgtcaca 618
Query: 900 ttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgctgttgagc 959
| | |||| || || |||||||| ||| | ||| | ||||||||||||| ||| |||
Sbjct: 617 tccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttggcgtttagc 558
Query: 960 agcgtgat 967
||||||||
Sbjct: 557 agcgtgat 550
>gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_F04_A002 5', mRNA sequence
Length = 716
Score = 95.6 bits (48), Expect = 1e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 840 gagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgaccgtcact 899
|||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||
Sbjct: 679 gagtcgcccatgtggatgccgtccgtgttggggctgtccccgggcgccgtgaccgtcaca 620
Query: 900 ttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgctgttgagc 959
| | |||| || || |||||||| ||| | ||| | ||||||||||||| ||| |||
Sbjct: 619 tccttaatcaacatgtccttgcactggaacacgttcatgtggaagaacttggcgtttagc 560
Query: 960 agcgtgat 967
||||||||
Sbjct: 559 agcgtgat 552
>gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 670
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 75 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 16
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 15 catgtgacgcc 5
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 434 ggaggtgccgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccgga 493
|||||||||| || |||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 322 ggaggtgccggtgacgttcttgaaggagacgtccttgacggtgaccttggaggcgccgct 263
Query: 494 cttgacgcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
| |||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 262 ggcggtgcagattttgttagggcagtacttcatgtcgatgataatggggt 213
>gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 3', mRNA sequence
Length = 637
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 123 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 64
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 63 catgtgacgcc 53
Score = 63.9 bits (32), Expect = 4e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccg 803
||||||||||||||||||||||||||||||||
Sbjct: 32 tcccggggccgatggagatgcagtcgtcgccg 1
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 434 ggaggtgccgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccgga 493
|||||||||| || |||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 370 ggaggtgccggtgacgttcttgaaggagacgtccttgacggtgaccttggaggcgccgct 311
Query: 494 cttgacgcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
| |||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 310 ggcggtgcagattttgttagggcagtacttcatgtcgatgataatggggt 261
>gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_E06_A002 5', mRNA sequence
Length = 556
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 524 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 465
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 464 catgtgacgcc 454
Score = 81.8 bits (41), Expect = 2e-013
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgccgatg 812
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcccggggccgatggagatgcagtcgtcgccgacgccgatg 393
>gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 3', mRNA sequence
Length = 618
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 98 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 39
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 38 catgtgacgcc 28
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 434 ggaggtgccgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccgga 493
|||||||||| || |||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 345 ggaggtgccggtgacgttcttgaaggagacgtccttgacggtgaccttggaggcgccgct 286
Query: 494 cttgacgcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
| |||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 285 ggcggtgcagattttgttagggcagtacttcatgtcgatgataatggggt 236
>gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 3', mRNA sequence
Length = 637
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 110 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 51
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 50 catgtgacgcc 40
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 434 ggaggtgccgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccgga 493
|||||||||| || |||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 357 ggaggtgccggtgacgttcttgaaggagacgtccttgacggtgaccttggaggcgccgct 298
Query: 494 cttgacgcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
| |||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 297 ggcggtgcagattttgttagggcagtacttcatgtcgatgataatggggt 248
>gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_F02_A002 3', mRNA sequence
Length = 619
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 106 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 47
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 46 catgtgacgcc 36
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 434 ggaggtgccgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccgga 493
|||||||||| || |||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 353 ggaggtgccggtgacgttcttgaaggagacgtccttgacggtgaccttggaggcgccgct 294
Query: 494 cttgacgcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
| |||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 293 ggcggtgcagattttgttagggcagtacttcatgtcgatgataatggggt 244
>gb|CF489718.1|CF489718 POL1_59_F04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_F04_A002 3', mRNA sequence
Length = 634
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 118 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 59
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 58 catgtgacgcc 48
Score = 54.0 bits (27), Expect = 4e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgt 798
|||||||||||||||||||||||||||
Sbjct: 27 tcccggggccgatggagatgcagtcgt 1
>gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_62_A05_A002 3', mRNA sequence
Length = 678
Score = 93.7 bits (47), Expect = 5e-017
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 259 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 200
Query: 741 cacttgacgcc 751
|| |||||||
Sbjct: 199 catgtgacgcc 189
Score = 73.8 bits (37), Expect = 4e-011
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 772 tcccggggccgatggagatgcagtcgtcgccgacgcc 808
|||||||||||||||||||||||||||||||||||||
Sbjct: 168 tcccggggccgatggagatgcagtcgtcgccgacgcc 132
Score = 71.9 bits (36), Expect = 2e-010
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 840 gagtcgccgatgtggatgccgtccgt-gttggggctgtcgccgggggccttgaccgtcac 898
|||||||| ||||||||||||||||| |||||||||||| ||||| ||| ||||||||||
Sbjct: 99 gagtcgcccatgtggatgccgtccgtngttggggctgtccccgggcgccgtgaccgtcac 40
>gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_A04_A002 3', mRNA sequence
Length = 402
Score = 91.7 bits (46), Expect = 2e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 67 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 8
Query: 741 ca 742
||
Sbjct: 7 ca 6
>gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 3', mRNA sequence
Length = 609
Score = 91.7 bits (46), Expect = 2e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 70 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 11
Query: 741 ca 742
||
Sbjct: 10 ca 9
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 434 ggaggtgccgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccgga 493
|||||||||| || |||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 317 ggaggtgccggtgacgttcttgaaggagacgtccttgacggtgaccttggaggcgccgct 258
Query: 494 cttgacgcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
| |||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 257 ggcggtgcagattttgttagggcagtacttcatgtcgatgataatggggt 208
>gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 3', mRNA sequence
Length = 670
Score = 91.7 bits (46), Expect = 2e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 67 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 8
Query: 741 ca 742
||
Sbjct: 7 ca 6
Score = 60.0 bits (30), Expect = 6e-007
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 434 ggaggtgccgtggatgttcttgaagacgacgtcgttgacggccaccttggaggcgccgga 493
|||||||||| || |||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 314 ggaggtgccggtgacgttcttgaaggagacgtccttgacggtgaccttggaggcgccgct 255
Query: 494 cttgacgcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
| |||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 254 ggcggtgcagattttgttagggcagtacttcatgtcgatgataatggggt 205
>gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_B02_A002 3', mRNA sequence
Length = 629
Score = 91.7 bits (46), Expect = 2e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 681 acgtccttctcgtccttgtagcgccccaggctgccgacgctgatgccgtggcctgggccg 740
|||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 67 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 8
Query: 741 ca 742
||
Sbjct: 7 ca 6
Score = 79.8 bits (40), Expect = 7e-013
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 852 tggatgccgtccgtgttggggctgtcgccgggggccttgaccgtcactttgtcgatcagc 911
|||||||||||||||||||||||||| ||||| ||| |||||||||| | | |||| |
Sbjct: 496 tggatgccgtccgtgttggggctgtccccgggcgccgtgaccgtcacatccttaatcaac 437
Query: 912 acgttcttgcactcgaagatgttgaggtggaagaacttgctgttgagcagcgtgat 967
| || |||||||| ||| | ||| | ||||||||||||| ||| |||||||||||
Sbjct: 436 atgtccttgcactggaacacgttcatgtggaagaacttggcgtttagcagcgtgat 381
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 500 gcagatgttgttggggcagtacttctggtcgatgatgatggggt 543
|||||| ||||| |||||||||||| ||||||||| |||||||
Sbjct: 248 gcagattttgttagggcagtacttcatgtcgatgataatggggt 205
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 450,475
Number of Sequences: 832831
Number of extensions: 450475
Number of successful extensions: 126373
Number of sequences better than 0.5: 155
Number of HSP's better than 0.5 without gapping: 154
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 125716
Number of HSP's gapped (non-prelim): 625
length of query: 1548
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1528
effective length of database: 474,703,049
effective search space: 725346258872
effective search space used: 725346258872
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)