BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3099514.2.1
(547 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD426765.1|CD426765 SA1_25_F05.b1_A002 Salicylic acid-tr... 347 7e-094
gb|BG158760.1|BG158760 RHIZ2_44_H10.g1_A003 Rhizome2 (RHIZ2... 339 2e-091
gb|CF756484.1|CF756484 DSAF1_5_G05.g1_A011 Drought-stressed... 327 6e-088
gb|CF756399.1|CF756399 DSAF1_5_G05.b1_A011 Drought-stressed... 258 5e-067
gb|CF761092.1|CF761092 DSAF1_71_A04.b1_A011 Drought-stresse... 254 7e-066
gb|CL172142.1|CL172142 104_374_10889941_148_31774_229 Sorgh... 206 2e-051
gb|CW232617.1|CW232617 104_685_11212913_148_37487_073 Sorgh... 206 2e-051
gb|BF481499.1|BF481499 FM1_19_H06.g1_A003 Floral-Induced Me... 202 2e-050
gb|AW747111.1|AW747111 WS1_65_F03.g1_A002 Water-stressed 1 ... 198 4e-049
gb|BG158828.1|BG158828 RHIZ2_44_H10.b1_A003 Rhizome2 (RHIZ2... 192 2e-047
gb|CF761002.1|CF761002 DSAF1_69_G03.b1_A011 Drought-stresse... 168 3e-040
gb|CF761648.1|CF761648 DSAF1_79_B06.b1_A011 Drought-stresse... 168 3e-040
gb|CF761656.1|CF761656 DSAF1_79_C05.b1_A011 Drought-stresse... 168 3e-040
gb|CF771640.1|CF771640 DSBF1_22_B07.g1_A010 Drought-stresse... 168 3e-040
gb|CF756952.1|CF756952 DSAF1_11_G02.g1_A011 Drought-stresse... 98 1e-018
gb|CW232616.1|CW232616 104_685_11212913_116_37488_073 Sorgh... 94 2e-017
gb|CW314810.1|CW314810 104_805_11472024_116_35816_086 Sorgh... 94 2e-017
gb|CW489053.1|CW489053 fsbb001f265m06k0 Sorghum methylation... 94 2e-017
gb|CW132733.1|CW132733 104_516_11116371_116_34804_012 Sorgh... 86 4e-015
gb|BI211662.1|BI211662 IP1_60_C11.g1_A002 Immature pannicle... 76 4e-012
gb|AW282448.1|AW282448 LG1_313_F10.g1_A002 Light Grown 1 (L... 68 9e-010
gb|AW284032.1|AW284032 LG1_264_H12.g1_A002 Light Grown 1 (L... 68 9e-010
gb|AW286230.1|AW286230 LG1_329_A12.g1_A002 Light Grown 1 (L... 68 9e-010
gb|AW286081.2|AW286081 LG1_261_B08.b1_A002 Light Grown 1 (L... 68 9e-010
gb|BE367684.1|BE367684 PI1_9_H03.g1_A002 Pathogen induced 1... 68 9e-010
gb|BE595034.1|BE595034 PI1_48_H06.g1_A002 Pathogen induced ... 68 9e-010
gb|BE600326.1|BE600326 PI1_95_A10.g1_A002 Pathogen induced ... 68 9e-010
gb|BF481147.1|BF481147 FM1_17_A01.g1_A003 Floral-Induced Me... 68 9e-010
gb|BF481584.1|BF481584 FM1_21_H05.g1_A003 Floral-Induced Me... 68 9e-010
gb|BF585857.1|BF585857 FM1_25_D03.g1_A003 Floral-Induced Me... 68 9e-010
gb|BF656718.1|BF656718 OV2_21_A11.g1_A002 Ovary 2 (OV2) Sor... 68 9e-010
gb|BF656744.1|BF656744 OV2_21_D06.g1_A002 Ovary 2 (OV2) Sor... 68 9e-010
gb|BF705290.1|BF705290 RHIZ2_3_B10.g1_A003 Rhizome2 (RHIZ2)... 68 9e-010
gb|BG048510.1|BG048510 OV1_14_D12.g2_A002 Ovary 1 (OV1) Sor... 68 9e-010
gb|BG049847.1|BG049847 FM1_66_F09.g1_A003 Floral-Induced Me... 68 9e-010
gb|BG050647.1|BG050647 FM1_70_H09.g1_A003 Floral-Induced Me... 68 9e-010
gb|BG052681.1|BG052681 RHIZ2_28_B06.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG052682.1|BG052682 RHIZ2_28_B07.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG053605.1|BG053605 RHIZ2_11_D11.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG053638.1|BG053638 RHIZ2_11_H07.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG103119.1|BG103119 RHIZ2_18_D06.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG103172.1|BG103172 RHIZ2_19_A09.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG103689.1|BG103689 RHIZ2_39_G09.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG103695.1|BG103695 RHIZ2_39_H03.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG103698.1|BG103698 RHIZ2_39_H06.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG158672.1|BG158672 RHIZ2_43_F09.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG357438.1|BG357438 OV2_29_H05.g1_A002 Ovary 2 (OV2) Sor... 68 9e-010
gb|BG357563.1|BG357563 OV2_31_D12.g1_A002 Ovary 2 (OV2) Sor... 68 9e-010
gb|BG410960.1|BG410960 EM1_28_A09.g1_A002 Embryo 1 (EM1) So... 68 9e-010
gb|BG465824.1|BG465824 RHIZ2_45_A07.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG466059.1|BG466059 RHIZ2_48_A12.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG487977.1|BG487977 RHIZ2_61_F05.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG559850.1|BG559850 RHIZ2_74_D05.g1_A003 Rhizome2 (RHIZ2... 68 9e-010
gb|BG948107.1|BG948107 IP1_9_E06.g1_A002 Immature pannicle ... 68 9e-010
gb|BI074299.1|BI074299 IP1_13_D04.g1_A002 Immature pannicle... 68 9e-010
gb|BI075127.1|BI075127 IP1_19_E03.g1_A002 Immature pannicle... 68 9e-010
gb|BI098112.1|BI098112 IP1_32_B12.g1_A002 Immature pannicle... 68 9e-010
gb|BI099169.1|BI099169 IP1_38_G06.g1_A002 Immature pannicle... 68 9e-010
gb|BI099596.1|BI099596 IP1_44_C06.g1_A002 Immature pannicle... 68 9e-010
gb|BI099597.1|BI099597 IP1_44_C07.g1_A002 Immature pannicle... 68 9e-010
gb|BI099606.1|BI099606 IP1_44_D05.g1_A002 Immature pannicle... 68 9e-010
gb|BI139635.1|BI139635 IP1_47_B08.g1_A002 Immature pannicle... 68 9e-010
gb|BI140101.1|BI140101 IP1_49_A09.g1_A002 Immature pannicle... 68 9e-010
gb|BG356071.2|BG356071 EM1_19_H10.g1_A002 Embryo 1 (EM1) So... 68 9e-010
gb|BM331323.1|BM331323 PIC1_64_F03.g1_A002 Pathogen-infecte... 68 9e-010
gb|CD204788.1|CD204788 HS1_10_D12.b1_A012 Heat-shocked seed... 68 9e-010
gb|CD226368.1|CD226368 CCC1_45_A06.b1_A007 Callus culture/c... 68 9e-010
gb|CD226522.1|CD226522 CCC1_46_D02.b1_A007 Callus culture/c... 68 9e-010
gb|CD228552.1|CD228552 CCC1_8_G03.b1_A007 Callus culture/ce... 68 9e-010
gb|CD235994.1|CD235994 SS1_25_C09.b1_A012 Salt-stressed see... 68 9e-010
gb|CD424195.1|CD424195 SA1_4_C04.b1_A002 Salicylic acid-tre... 68 9e-010
gb|CD461754.1|CD461754 SA1_35_D07.b1_A002 Salicylic acid-tr... 68 9e-010
gb|CF757481.1|CF757481 DSAF1_18_E02.g1_A011 Drought-stresse... 68 9e-010
gb|CF758040.1|CF758040 DSAF1_26_E08.g1_A011 Drought-stresse... 68 9e-010
gb|CF760425.1|CF760425 DSAF1_60_G03.b1_A011 Drought-stresse... 68 9e-010
gb|CF760426.1|CF760426 DSAF1_60_G04.b1_A011 Drought-stresse... 68 9e-010
gb|CF769462.1|CF769462 DSBF1_1_F12.g1_A010 Drought-stressed... 68 9e-010
gb|CF771900.1|CF771900 DSBF1_25_G07.g1_A010 Drought-stresse... 68 9e-010
gb|CN127099.1|CN127099 RHOH1_21_B12.b1_A002 Acid- and alkal... 68 9e-010
gb|CN127185.1|CN127185 RHOH1_21_B12.g3_A002 Acid- and alkal... 68 9e-010
gb|CN136151.1|CN136151 OX1_41_C08.b1_A002 Oxidatively-stres... 68 9e-010
gb|CN136782.1|CN136782 OX1_53_F10.b1_A002 Oxidatively-stres... 68 9e-010
gb|CN149956.1|CN149956 WOUND1_66_B01.b1_A002 Wounded leaves... 68 9e-010
gb|CX606812.1|CX606812 ANR1_5_C11.b1_A002 Anaerobic roots S... 68 9e-010
gb|CX607729.1|CX607729 ANR1_30_H09.b1_A002 Anaerobic roots ... 68 9e-010
gb|CX607868.1|CX607868 ANR1_31_F07.b1_A002 Anaerobic roots ... 68 9e-010
gb|CX609718.1|CX609718 ANR1_14_G09.b1_A002 Anaerobic roots ... 68 9e-010
gb|CX610001.1|CX610001 ANR1_16_C01.b1_A002 Anaerobic roots ... 68 9e-010
gb|CX611373.1|CX611373 ANR1_24_G01.b1_A002 Anaerobic roots ... 68 9e-010
gb|CX611522.1|CX611522 ANR1_25_D10.b1_A002 Anaerobic roots ... 68 9e-010
gb|CX611902.1|CX611902 ANR1_27_H05.b1_A002 Anaerobic roots ... 68 9e-010
gb|CX617026.1|CX617026 GABR1_31_F08.b1_A002 GA- or brassino... 68 9e-010
gb|CX622464.1|CX622464 GABR1_64_D05.b2_A002 GA- or brassino... 68 9e-010
gb|BE599005.1|BE599005 PI1_86_C03.g1_A002 Pathogen induced ... 66 4e-009
gb|BE917651.1|BE917651 OV1_6_D05.g1_A002 Ovary 1 (OV1) Sorg... 66 4e-009
gb|BE918683.1|BE918683 FM1_1_C06.g1_A003 Floral-Induced Mer... 66 4e-009
gb|BF421818.1|BF421818 FM1_11_B10.g1_A003 Floral-Induced Me... 66 4e-009
gb|BF422107.1|BF422107 FM1_12_H12.g1_A003 Floral-Induced Me... 66 4e-009
gb|BF585491.1|BF585491 FM1_23_B07.g1_A003 Floral-Induced Me... 66 4e-009
gb|BF586085.1|BF586085 FM1_26_E04.g1_A003 Floral-Induced Me... 66 4e-009
gb|BF586806.1|BF586806 FM1_30_E10.g1_A003 Floral-Induced Me... 66 4e-009
gb|BF588377.1|BF588377 FM1_36_A01.g1_A003 Floral-Induced Me... 66 4e-009
gb|BG102583.1|BG102583 RHIZ2_34_G11.g1_A003 Rhizome2 (RHIZ2... 66 4e-009
gb|BG464530.1|BG464530 EM1_70_H05.g1_A002 Embryo 1 (EM1) So... 66 4e-009
gb|BG948149.1|BG948149 IP1_10_A05.g1_A002 Immature pannicle... 66 4e-009
gb|BI211526.1|BI211526 IP1_58_D11.g1_A002 Immature pannicle... 66 4e-009
gb|CD205142.1|CD205142 HS1_12_B07.b1_A012 Heat-shocked seed... 66 4e-009
gb|CD221324.1|CD221324 CCC1_54_E03.b1_A007 Callus culture/c... 66 4e-009
gb|CD227849.1|CD227849 CCC1_56_C03.b1_A007 Callus culture/c... 66 4e-009
gb|CD230950.1|CD230950 SS1_7_H09.b1_A012 Salt-stressed seed... 66 4e-009
gb|CD422965.1|CD422965 SA1_29_D07.b1_A002 Salicylic acid-tr... 66 4e-009
gb|CD426966.1|CD426966 SA1_26_H06.b1_A002 Salicylic acid-tr... 66 4e-009
gb|CF073769.1|CF073769 FE1_12_A06.b1_A002 Iron-deficient se... 66 4e-009
gb|CN125578.1|CN125578 RHOH1_12_A02.b1_A002 Acid- and alkal... 66 4e-009
gb|CN125652.1|CN125652 RHOH1_12_A02.g1_A002 Acid- and alkal... 66 4e-009
gb|CN128129.1|CN128129 RHOH1_27_E08.b1_A002 Acid- and alkal... 66 4e-009
gb|CN129769.1|CN129769 RHOH1_37_G04.b1_A002 Acid- and alkal... 66 4e-009
gb|CX607003.1|CX607003 ANR1_6_D07.b1_A002 Anaerobic roots S... 66 4e-009
gb|CX609146.1|CX609146 ANR1_11_A02.b1_A002 Anaerobic roots ... 66 4e-009
gb|CX609836.1|CX609836 ANR1_15_B10.b1_A002 Anaerobic roots ... 66 4e-009
gb|CX610350.1|CX610350 ANR1_18_D07.b1_A002 Anaerobic roots ... 66 4e-009
gb|CX607685.1|CX607685 ANR1_30_D08.b1_A002 Anaerobic roots ... 64 1e-008
gb|CL172141.1|CL172141 104_374_10889941_116_31775_229 Sorgh... 62 6e-008
gb|BG052591.1|BG052591 RHIZ2_25_E05.g1_A003 Rhizome2 (RHIZ2... 62 6e-008
gb|CD223275.1|CD223275 CCC1_27_E01.b1_A007 Callus culture/c... 62 6e-008
gb|CF756788.1|CF756788 DSAF1_9_C03.g1_A011 Drought-stressed... 62 6e-008
gb|CN129417.1|CN129417 RHOH1_35_G06.b3_A002 Acid- and alkal... 62 6e-008
gb|BE356599.1|BE356599 DG1_126_B05.g1_A002 Dark Grown 1 (DG... 60 2e-007
gb|BI245513.1|BI245513 IP1_66_D05.g1_A002 Immature pannicle... 60 2e-007
gb|CN125162.1|CN125162 RHOH1_9_G11.b1_A002 Acid- and alkali... 60 2e-007
gb|CW306517.1|CW306517 104_792_11466886_116_35710_091 Sorgh... 58 9e-007
gb|CW306518.1|CW306518 104_792_11466886_148_35714_091 Sorgh... 58 9e-007
gb|CD462235.1|CD462235 SA1_40_B12.b1_A002 Salicylic acid-tr... 58 9e-007
gb|CF072061.1|CF072061 FE1_20_F10.b1_A002 Iron-deficient se... 58 9e-007
gb|DN551742.1|DN551742 pSPR-L_D05_S077 pSPR Sorghum propinq... 58 9e-007
gb|BF421274.1|BF421274 FM1_7_F08.g1_A003 Floral-Induced Mer... 56 3e-006
gb|BF421786.1|BF421786 FM1_11_E09.g1_A003 Floral-Induced Me... 56 3e-006
gb|BF585480.1|BF585480 FM1_23_A08.g1_A003 Floral-Induced Me... 56 3e-006
gb|BF585538.1|BF585538 FM1_23_F11.g1_A003 Floral-Induced Me... 56 3e-006
gb|BF585849.1|BF585849 FM1_25_C05.g1_A003 Floral-Induced Me... 56 3e-006
gb|BG050455.1|BG050455 FM1_69_D11.g1_A003 Floral-Induced Me... 56 3e-006
gb|BG051408.1|BG051408 FM1_56_B04.g1_A003 Floral-Induced Me... 56 3e-006
gb|BG051619.1|BG051619 FM1_59_A05.g1_A003 Floral-Induced Me... 56 3e-006
gb|BG052254.1|BG052254 RHIZ2_12_B07.g1_A003 Rhizome2 (RHIZ2... 56 3e-006
gb|BG102671.1|BG102671 RHIZ2_35_H02.g1_A003 Rhizome2 (RHIZ2... 56 3e-006
gb|BG103098.1|BG103098 RHIZ2_18_B06.g1_A003 Rhizome2 (RHIZ2... 56 3e-006
gb|BG241505.1|BG241505 RHIZ2_50_B06.g1_A003 Rhizome2 (RHIZ2... 56 3e-006
gb|BG487832.1|BG487832 FM1_73_A08.g1_A003 Floral-Induced Me... 56 3e-006
gb|BG947159.1|BG947159 IP1_3_C05.g1_A002 Immature pannicle ... 56 3e-006
gb|BG947537.1|BG947537 IP1_5_F12.g1_A002 Immature pannicle ... 56 3e-006
gb|BI074392.1|BI074392 IP1_14_A09.g1_A002 Immature pannicle... 56 3e-006
gb|BI075000.1|BI075000 IP1_18_G08.g1_A002 Immature pannicle... 56 3e-006
gb|BI075534.1|BI075534 IP1_21_F12.g1_A002 Immature pannicle... 56 3e-006
gb|BI076317.1|BI076317 IP1_25_F12.g1_A002 Immature pannicle... 56 3e-006
gb|BI098042.1|BI098042 IP1_31_C12.g1_A002 Immature pannicle... 56 3e-006
gb|BI245571.1|BI245571 IP1_67_C06.g1_A002 Immature pannicle... 56 3e-006
gb|CD229950.1|CD229950 SS1_40_E02.b1_A012 Salt-stressed see... 56 3e-006
gb|AW565204.1|AW565204 LG1_328_E08.b1_A002 Light Grown 1 (L... 54 1e-005
gb|CD427253.1|CD427253 SA1_18_F09.b1_A002 Salicylic acid-tr... 54 1e-005
gb|CD461651.1|CD461651 SA1_34_D12.b1_A002 Salicylic acid-tr... 54 1e-005
gb|BF481602.1|BF481602 FM1_20_B02.g1_A003 Floral-Induced Me... 52 5e-005
gb|BG241490.1|BG241490 RHIZ2_50_A01.g1_A003 Rhizome2 (RHIZ2... 52 5e-005
gb|CF482839.1|CF482839 POL1_9_B05.g1_A002 Pollen Sorghum bi... 52 5e-005
gb|AW747574.1|AW747574 WS1_73_F06.g1_A002 Water-stressed 1 ... 50 2e-004
gb|BI098564.1|BI098564 IP1_34_A09.g1_A002 Immature pannicle... 50 2e-004
gb|BI099225.1|BI099225 IP1_40_A05.g1_A002 Immature pannicle... 50 2e-004
gb|AW284402.1|AW284402 LG1_289_B08.g1_A002 Light Grown 1 (L... 48 9e-004
gb|BF420952.1|BF420952 FM1_5_D01.g1_A003 Floral-Induced Mer... 48 9e-004
gb|BF586297.1|BF586297 FM1_27_B05.g1_A003 Floral-Induced Me... 48 9e-004
gb|BF586792.1|BF586792 FM1_30_D05.g1_A003 Floral-Induced Me... 48 9e-004
gb|BG050445.1|BG050445 FM1_69_C08.g1_A003 Floral-Induced Me... 48 9e-004
gb|BG052516.1|BG052516 RHIZ2_26_B06.g1_A003 Rhizome2 (RHIZ2... 48 9e-004
gb|BG102461.1|BG102461 RHIZ2_33_C04.g1_A003 Rhizome2 (RHIZ2... 48 9e-004
gb|BI099455.1|BI099455 IP1_42_D04.g1_A002 Immature pannicle... 48 9e-004
gb|BI211810.1|BI211810 IP1_61_D05.b1_A002 Immature pannicle... 48 9e-004
gb|CD219824.1|CD219824 CCC1_59_F08.b1_A007 Callus culture/c... 48 9e-004
gb|CF757697.1|CF757697 DSAF1_21_B04.g1_A011 Drought-stresse... 46 0.003
gb|CF769383.1|CF769383 DSBF1_1_F12.b1_A010 Drought-stressed... 46 0.003
gb|CN126429.1|CN126429 RHOH1_17_D01.b1_A002 Acid- and alkal... 46 0.003
gb|BI099088.1|BI099088 IP1_37_D10.g1_A002 Immature pannicle... 44 0.013
gb|BI099214.1|BI099214 IP1_39_G01.g1_A002 Immature pannicle... 44 0.013
gb|BG050483.1|BG050483 FM1_69_H10.g1_A003 Floral-Induced Me... 42 0.052
gb|BI098088.1|BI098088 IP1_31_H04.g1_A002 Immature pannicle... 42 0.052
gb|BG051684.1|BG051684 FM1_60_A07.g1_A003 Floral-Induced Me... 40 0.21
gb|CF772885.1|CF772885 DSBF1_40_E06.g1_A010 Drought-stresse... 40 0.21
>gb|CD426765.1|CD426765 SA1_25_F05.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_25_F05_A002 3', mRNA sequence
Length = 664
Score = 347 bits (175), Expect = 7e-094
Identities = 226/243 (93%)
Strand = Plus / Plus
Query: 1 caagcaagacccagatcactgggtgaaaatatctggagcagggctgcagcgcatatacga 60
||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 10 caagcaagacccaaatcactgggtgaaaatatctgaagcaggacttaagcgcatatacga 69
Query: 61 gaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggttt 120
||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||
Sbjct: 70 aaagtacacatggaagatatactctgagaggttgatgacattggccggggtctatggttt 129
Query: 121 ctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttcta 180
||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 130 ctggaagtatgtgtccaagcttgagaggcgggagacaaggcgctaccttgagatgttcta 189
Query: 181 catactgaagttccgcgagctggcgaagaccgtgccgcttgcaattgaccaaccgcagta 240
|||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 190 catattgaagttccgcgagctggcgaagaccgtgccgcttgcaattgaccagccacagta 249
Query: 241 gct 243
|||
Sbjct: 250 gct 252
Score = 93.7 bits (47), Expect = 2e-017
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgctga 498
||||||||||||||||||||||| | | | |||| ||||||||||||||| |||||||||
Sbjct: 549 tgtcaagctgtcggctgcaatttgtcttcaggcaggccgcaggcactggtaaagtgctga 608
Query: 499 taaatacatcatattctgttgac 521
| |||||| ||||||||||||||
Sbjct: 609 t-aatacagcatattctgttgac 630
Score = 77.8 bits (39), Expect = 1e-012
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 330 gaaggaccttcagtaatttaggtgcggcagacggcagctaataaaatgtgc 380
>gb|BG158760.1|BG158760 RHIZ2_44_H10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 604
Score = 339 bits (171), Expect = 2e-091
Identities = 222/239 (92%)
Strand = Plus / Plus
Query: 5 caagacccagatcactgggtgaaaatatctggagcagggctgcagcgcatatacgagaag 64
||||||||| ||||||||||||||||||||| |||||| || ||||||||||||| |||
Sbjct: 1 caagacccaaatcactgggtgaaaatatctgaagcaggacttaagcgcatatacgaaaag 60
Query: 65 tacacatggaagatatactcagagaggttgatgatactggccggggtctacggtttctgg 124
|||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||
Sbjct: 61 tacacatggaagatatactctgagaggttgatgacattggccggggtctatggtttctgg 120
Query: 125 aagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacata 184
||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 121 aagtatgtgtccaagcttgagaggcgggagacaaggcgctaccttgagatgttctacata 180
Query: 185 ctgaagttccgcgagctggcgaagaccgtgccgcttgcaattgaccaaccgcagtagct 243
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 181 ttgaagttccgcgagctggcgaagaccgtgccgcttgcaattgaccagccacagtagct 239
Score = 77.8 bits (39), Expect = 1e-012
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 317 gaaggaccttcagtaatttaggtgcggcagacggcagctaataaaatgtgc 367
Score = 73.8 bits (37), Expect = 1e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgc 495
||||||||||||||||||||||||| | | |||| ||||||||||||||| ||||||
Sbjct: 535 tgtcaagctgtcggctgcaatttctcttcaggcaggccgcaggcactggtaaagtgc 591
>gb|CF756484.1|CF756484 DSAF1_5_G05.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_5_G05_A011 3', mRNA sequence
Length = 732
Score = 327 bits (165), Expect = 6e-088
Identities = 213/229 (93%)
Strand = Plus / Minus
Query: 15 atcactgggtgaaaatatctggagcagggctgcagcgcatatacgagaagtacacatgga 74
||||||||||||||||||||| |||||| || ||||||||||||| |||||||||||||
Sbjct: 664 atcactgggtgaaaatatctgaagcaggacttaagcgcatatacgaaaagtacacatgga 605
Query: 75 agatatactcagagaggttgatgatactggccggggtctacggtttctggaagtacgtgt 134
|||||||||| ||||||||||||| | ||||||||||||| |||||||||||||| ||||
Sbjct: 604 agatatactctgagaggttgatgacattggccggggtctatggtttctggaagtatgtgt 545
Query: 135 cgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactgaagttcc 194
| ||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 544 ccaagcttgagaggcgggagacaaggcgctaccttgagatgttctacatattgaagttcc 485
Query: 195 gcgagctggcgaagaccgtgccgcttgcaattgaccaaccgcagtagct 243
||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 484 gcgagctggcgaagaccgtgccgcttgcaattgaccagccacagtagct 436
Score = 91.7 bits (46), Expect = 6e-017
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgctga 498
||||||||||||||||||||||||| | | |||| ||||||||||||||| |||||||||
Sbjct: 136 tgtcaagctgtcggctgcaatttctcttcaggcaggccgcaggcactggtaaagtgctga 77
Query: 499 taaatacatcatattctgttga 520
| |||||| |||||| ||||||
Sbjct: 76 t-aatacagcatattttgttga 56
Score = 69.9 bits (35), Expect = 2e-010
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| | | ||||||||||||
Sbjct: 358 gaaggaccttcagtaatttaggtgcggcagacggcaactaataaaatgtgc 308
>gb|CF756399.1|CF756399 DSAF1_5_G05.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_5_G05_A011 5', mRNA sequence
Length = 603
Score = 258 bits (130), Expect = 5e-067
Identities = 163/174 (93%)
Strand = Plus / Minus
Query: 70 atggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaagta 129
||||||||||||||| ||||||||||||| | ||||||||||||| ||||||||||||||
Sbjct: 603 atggaagatatactctgagaggttgatgacattggccggggtctatggtttctggaagta 544
Query: 130 cgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactgaa 189
||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 543 tgtgtccaagcttgagaggcgggagacaaggcgctaccttgagatgttctacatattgaa 484
Query: 190 gttccgcgagctggcgaagaccgtgccgcttgcaattgaccaaccgcagtagct 243
|||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 483 gttccgcgagctggcgaagaccgtgccgcttgcaattgaccagccacagtagct 430
Score = 91.7 bits (46), Expect = 6e-017
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgctga 498
||||||||||||||||||||||||| | | |||| ||||||||||||||| |||||||||
Sbjct: 130 tgtcaagctgtcggctgcaatttctcttcaggcaggccgcaggcactggtaaagtgctga 71
Query: 499 taaatacatcatattctgttga 520
| |||||| |||||| ||||||
Sbjct: 70 t-aatacagcatattttgttga 50
Score = 69.9 bits (35), Expect = 2e-010
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| | | ||||||||||||
Sbjct: 352 gaaggaccttcagtaatttaggtgcggcagacggcaactaataaaatgtgc 302
>gb|CF761092.1|CF761092 DSAF1_71_A04.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_71_A04_A011 5', mRNA sequence
Length = 514
Score = 254 bits (128), Expect = 7e-066
Identities = 176/192 (91%)
Strand = Plus / Plus
Query: 1 caagcaagacccagatcactgggtgaaaatatctggagcagggctgcagcgcatatacga 60
||||||||||||| ||||||||||||||||||||| |||||| || ||||||||||| |
Sbjct: 323 caagcaagacccaaatcactgggtgaaaatatctgaagcaggacttaagcgcatatacta 382
Query: 61 gaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggttt 120
||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||
Sbjct: 383 aaagtacacatggaagatatactctgagaggttgatgacattggccggggtctatggttt 442
Query: 121 ctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttcta 180
||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 443 ctggaagtatgtgtccaagcttgagaggcgggagacaaggcgctaccttgagatgttcta 502
Query: 181 catactgaagtt 192
|||| |||||||
Sbjct: 503 catattgaagtt 514
>gb|CL172142.1|CL172142 104_374_10889941_148_31774_229 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889941, DNA
sequence
Length = 720
Score = 206 bits (104), Expect = 2e-051
Identities = 131/140 (93%)
Strand = Plus / Minus
Query: 64 gtacacatggaagatatactcagagaggttgatgatactggccggggtctacggtttctg 123
||||||||||||||||||||| ||||||||||||| | ||||||||||||| ||||||||
Sbjct: 160 gtacacatggaagatatactctgagaggttgatgacattggccggggtctatggtttctg 101
Query: 124 gaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacat 183
|||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 100 gaagtatgtgtccaagcttgagaggcgggagacaaggcgctaccttgagatgttctacat 41
Query: 184 actgaagttccgcgagctgg 203
| ||||||||||||||||||
Sbjct: 40 attgaagttccgcgagctgg 21
Score = 81.8 bits (41), Expect = 6e-014
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 1 caagcaagacccagatcactgggtgaaaatatctggagcagggctgcagcgcatatacga 60
||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 353 caagcaagacccaaatcactgggtgaaaatatctgaagcaggacttaagcgcatatacga 294
Query: 61 gaagt 65
||||
Sbjct: 293 aaagt 289
>gb|CW232617.1|CW232617 104_685_11212913_148_37487_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11212913, DNA
sequence
Length = 610
Score = 206 bits (104), Expect = 2e-051
Identities = 131/140 (93%)
Strand = Plus / Plus
Query: 64 gtacacatggaagatatactcagagaggttgatgatactggccggggtctacggtttctg 123
||||||||||||||||||||| ||||||||||||| | ||||||||||||| ||||||||
Sbjct: 226 gtacacatggaagatatactctgagaggttgatgacattggccggggtctatggtttctg 285
Query: 124 gaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacat 183
|||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 286 gaagtatgtgtccaagcttgagaggcgggagacaaggcgctaccttgagatgttctacat 345
Query: 184 actgaagttccgcgagctgg 203
| ||||||||||||||||||
Sbjct: 346 attgaagttccgcgagctgg 365
Score = 81.8 bits (41), Expect = 6e-014
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 caagcaagacccagatcactgggtgaaaatatctggagcagggctgcagcgcatatacga 60
||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 33 caagcaagacccaaatcactgggtgaaaatatctgaagcaggacttaagcgcatatacga 92
Query: 61 gaagt 65
||||
Sbjct: 93 aaagt 97
Score = 67.9 bits (34), Expect = 9e-010
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 202 ggcgaagaccgtgccgcttgcaattgaccaaccgcagtagct 243
|||||||||||||||||||||||||||||| || ||||||||
Sbjct: 517 ggcgaagaccgtgccgcttgcaattgaccagccacagtagct 558
>gb|BF481499.1|BF481499 FM1_19_H06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 503
Score = 202 bits (102), Expect = 2e-050
Identities = 126/134 (94%)
Strand = Plus / Plus
Query: 110 gtctacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctacctt 169
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 1 gtctatggtttctggaagtatgtgtccaagcttgagaggcgggagacaaggcgctacctt 60
Query: 170 gagatgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgcaattgac 229
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagatgttctacatattgaagttccgcgagctggcgaagaccgtgccgcttgcaattgac 120
Query: 230 caaccgcagtagct 243
|| || ||||||||
Sbjct: 121 cagccacagtagct 134
Score = 77.8 bits (39), Expect = 1e-012
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 212 gaaggaccttcagtaatttaggtgcggcagacggcagctaataaaatgtgc 262
Score = 73.8 bits (37), Expect = 1e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgc 495
||||||||||||||||||||||||| | | |||| ||||||||||||||| ||||||
Sbjct: 430 tgtcaagctgtcggctgcaatttctcttcaggcaggccgcaggcactggtaaagtgc 486
>gb|AW747111.1|AW747111 WS1_65_F03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 511
Score = 198 bits (100), Expect = 4e-049
Identities = 121/128 (94%)
Strand = Plus / Plus
Query: 116 ggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2 ggtttctggaagtatgtgtccaagcttgagaggcgggagacaaggcgctaccttgagatg 61
Query: 176 ttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgcaattgaccaaccg 235
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 62 ttctacatattgaagttccgcgagctggcgaagaccgtgccgcttgcaattgaccagcca 121
Query: 236 cagtagct 243
||||||||
Sbjct: 122 cagtagct 129
Score = 93.7 bits (47), Expect = 2e-017
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgctga 498
||||||||||||||||||||||| | | | |||| ||||||||||||||| |||||||||
Sbjct: 426 tgtcaagctgtcggctgcaatttgtcttcaggcaggccgcaggcactggtaaagtgctga 485
Query: 499 taaatacatcatattctgttgac 521
| |||||| ||||||||||||||
Sbjct: 486 t-aatacagcatattctgttgac 507
Score = 77.8 bits (39), Expect = 1e-012
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 207 gaaggaccttcagtaatttaggtgcggcagacggcagctaataaaatgtgc 257
>gb|BG158828.1|BG158828 RHIZ2_44_H10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 431
Score = 192 bits (97), Expect = 2e-047
Identities = 136/149 (91%)
Strand = Plus / Plus
Query: 1 caagcaagacccagatcactgggtgaaaatatctggagcagggctgcagcgcatatacga 60
||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 283 caagcaagacccaaatcactgggtgaaaatatctgaagcaggacttaagcgcatatacga 342
Query: 61 gaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggttt 120
||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||
Sbjct: 343 aaagtacacatggaagatatactctgagaggttgatgacattggccggggtctatggttt 402
Query: 121 ctggaagtacgtgtcgaagctcgagaggc 149
||||||||| ||||| ||||| |||||||
Sbjct: 403 ctggaagtatgtgtccaagcttgagaggc 431
>gb|CF761002.1|CF761002 DSAF1_69_G03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_69_G03_A011 5', mRNA sequence
Length = 426
Score = 168 bits (85), Expect = 3e-040
Identities = 97/101 (96%)
Strand = Plus / Plus
Query: 143 gagaggcgggagacgaggcgctaccttgagatgttctacatactgaagttccgcgagctg 202
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4 gagaggcgggagacaaggcgctaccttgagatgttctacatattgaagttccgcgagctg 63
Query: 203 gcgaagaccgtgccgcttgcaattgaccaaccgcagtagct 243
||||||||||||||||||||||||||||| || ||||||||
Sbjct: 64 gcgaagaccgtgccgcttgcaattgaccagccacagtagct 104
Score = 69.9 bits (35), Expect = 2e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| | | ||||||||||||
Sbjct: 182 gaaggaccttcagtaatttaggtgcggcagacggcaactaataaaatgtgc 232
>gb|CF761648.1|CF761648 DSAF1_79_B06.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_79_B06_A011 5', mRNA sequence
Length = 426
Score = 168 bits (85), Expect = 3e-040
Identities = 97/101 (96%)
Strand = Plus / Plus
Query: 143 gagaggcgggagacgaggcgctaccttgagatgttctacatactgaagttccgcgagctg 202
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4 gagaggcgggagacaaggcgctaccttgagatgttctacatattgaagttccgcgagctg 63
Query: 203 gcgaagaccgtgccgcttgcaattgaccaaccgcagtagct 243
||||||||||||||||||||||||||||| || ||||||||
Sbjct: 64 gcgaagaccgtgccgcttgcaattgaccagccacagtagct 104
Score = 69.9 bits (35), Expect = 2e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| | | ||||||||||||
Sbjct: 182 gaaggaccttcagtaatttaggtgcggcagacggcaactaataaaatgtgc 232
>gb|CF761656.1|CF761656 DSAF1_79_C05.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_79_C05_A011 5', mRNA sequence
Length = 426
Score = 168 bits (85), Expect = 3e-040
Identities = 97/101 (96%)
Strand = Plus / Plus
Query: 143 gagaggcgggagacgaggcgctaccttgagatgttctacatactgaagttccgcgagctg 202
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4 gagaggcgggagacaaggcgctaccttgagatgttctacatattgaagttccgcgagctg 63
Query: 203 gcgaagaccgtgccgcttgcaattgaccaaccgcagtagct 243
||||||||||||||||||||||||||||| || ||||||||
Sbjct: 64 gcgaagaccgtgccgcttgcaattgaccagccacagtagct 104
Score = 69.9 bits (35), Expect = 2e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| | | ||||||||||||
Sbjct: 182 gaaggaccttcagtaatttaggtgcggcagacggcaactaataaaatgtgc 232
>gb|CF771640.1|CF771640 DSBF1_22_B07.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_22_B07_A010 3', mRNA sequence
Length = 406
Score = 168 bits (85), Expect = 3e-040
Identities = 97/101 (96%)
Strand = Plus / Plus
Query: 143 gagaggcgggagacgaggcgctaccttgagatgttctacatactgaagttccgcgagctg 202
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4 gagaggcgggagacaaggcgctaccttgagatgttctacatattgaagttccgcgagctg 63
Query: 203 gcgaagaccgtgccgcttgcaattgaccaaccgcagtagct 243
||||||||||||||||||||||||||||| || ||||||||
Sbjct: 64 gcgaagaccgtgccgcttgcaattgaccagccacagtagct 104
Score = 69.9 bits (35), Expect = 2e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| | | ||||||||||||
Sbjct: 182 gaaggaccttcagtaatttaggtgcggcagacggcaactaataaaatgtgc 232
>gb|CF756952.1|CF756952 DSAF1_11_G02.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_11_G02_A011 3', mRNA sequence
Length = 336
Score = 97.6 bits (49), Expect = 1e-018
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgctga 498
||||||||||||||||||||||||||| | |||| ||||||||||||||| |||||||||
Sbjct: 251 tgtcaagctgtcggctgcaatttcttttcaggcaggccgcaggcactggtaaagtgctga 310
Query: 499 taaatacatcatattctgttg 519
| |||||| |||||| |||||
Sbjct: 311 t-aatacagcatattttgttg 330
Score = 69.9 bits (35), Expect = 2e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| | | ||||||||||||
Sbjct: 29 gaaggaccttcagtaatttaggtgcggcagacggcaactaataaaatgtgc 79
>gb|CW232616.1|CW232616 104_685_11212913_116_37488_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11212913, DNA
sequence
Length = 689
Score = 93.7 bits (47), Expect = 2e-017
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgctga 498
||||||||||||||||||||||| | | | |||| ||||||||||||||| |||||||||
Sbjct: 264 tgtcaagctgtcggctgcaatttgtcttcaggcaggccgcaggcactggtaaagtgctga 205
Query: 499 taaatacatcatattctgttgac 521
| |||||| ||||||||||||||
Sbjct: 204 t-aatacagcatattctgttgac 183
Score = 77.8 bits (39), Expect = 1e-012
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 483 gaaggaccttcagtaatttaggtgcggcagacggcagctaataaaatgtgc 433
Score = 67.9 bits (34), Expect = 9e-010
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 202 ggcgaagaccgtgccgcttgcaattgaccaaccgcagtagct 243
|||||||||||||||||||||||||||||| || ||||||||
Sbjct: 602 ggcgaagaccgtgccgcttgcaattgaccagccacagtagct 561
>gb|CW314810.1|CW314810 104_805_11472024_116_35816_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472024, DNA
sequence
Length = 625
Score = 93.7 bits (47), Expect = 2e-017
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgctga 498
||||||||||||||||||||||| | | | |||| ||||||||||||||| |||||||||
Sbjct: 106 tgtcaagctgtcggctgcaatttgtcttcaggcaggccgcaggcactggtaaagtgctga 165
Query: 499 taaatacatcatattctgttgac 521
| |||||| ||||||||||||||
Sbjct: 166 t-aatacagcatattctgttgac 187
>gb|CW489053.1|CW489053 fsbb001f265m06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f265m06, DNA
sequence
Length = 751
Score = 93.7 bits (47), Expect = 2e-017
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgctga 498
||||||||||||||||||||||| | | | |||| ||||||||||||||| |||||||||
Sbjct: 480 tgtcaagctgtcggctgcaatttgtcttcaggcaggccgcaggcactggtaaagtgctga 539
Query: 499 taaatacatcatattctgttgac 521
| |||||| ||||||||||||||
Sbjct: 540 t-aatacagcatattctgttgac 561
Score = 77.8 bits (39), Expect = 1e-012
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 288 gaaggaccttcagtaatttaggcgcggcagacggtagccaataaaatgtgc 338
|||||||||||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 261 gaaggaccttcagtaatttaggtgcggcagacggcagctaataaaatgtgc 311
Score = 67.9 bits (34), Expect = 9e-010
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 202 ggcgaagaccgtgccgcttgcaattgaccaaccgcagtagct 243
|||||||||||||||||||||||||||||| || ||||||||
Sbjct: 142 ggcgaagaccgtgccgcttgcaattgaccagccacagtagct 183
>gb|CW132733.1|CW132733 104_516_11116371_116_34804_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11116371, DNA
sequence
Length = 599
Score = 85.7 bits (43), Expect = 4e-015
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 439 tgtcaagctgtcggctgcaatttctttgctggcaagccgcaggcactggtgaagtgctga 498
||||||||||||||||||||||| | | | |||| ||||||||||| ||| |||||||||
Sbjct: 44 tgtcaagctgtcggctgcaatttgtcttcaggcacgccgcaggcacaggtaaagtgctga 103
Query: 499 taaatacatcatattctgttgac 521
| |||||| ||||||||||||||
Sbjct: 104 t-aatacagcatattctgttgac 125
>gb|BI211662.1|BI211662 IP1_60_C11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 405
Score = 75.8 bits (38), Expect = 4e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| ||||||||||||| ||| | || || |||||
Sbjct: 22 gagaagtacacctggaagctctactccgagaggttgatgaccctgactggtgtatacgga 81
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 82 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 141
Query: 179 ta 180
||
Sbjct: 142 ta 143
>gb|AW282448.1|AW282448 LG1_313_F10.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 552
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 161 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 220
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 221 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 280
Query: 179 ta 180
||
Sbjct: 281 ta 282
>gb|AW284032.1|AW284032 LG1_264_H12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 544
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 161 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 220
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 221 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 280
Query: 179 ta 180
||
Sbjct: 281 ta 282
>gb|AW286230.1|AW286230 LG1_329_A12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 509
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 112 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 171
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 172 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 231
Query: 179 ta 180
||
Sbjct: 232 ta 233
>gb|AW286081.2|AW286081 LG1_261_B08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 493
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 248 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 307
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 308 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 367
Query: 179 ta 180
||
Sbjct: 368 ta 369
>gb|BE367684.1|BE367684 PI1_9_H03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 548
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 158 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 217
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 218 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 277
Query: 179 ta 180
||
Sbjct: 278 ta 279
>gb|BE595034.1|BE595034 PI1_48_H06.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 657
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 307 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 366
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 367 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 426
Query: 179 ta 180
||
Sbjct: 427 ta 428
>gb|BE600326.1|BE600326 PI1_95_A10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 633
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 293 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 352
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 353 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 412
Query: 179 ta 180
||
Sbjct: 413 ta 414
>gb|BF481147.1|BF481147 FM1_17_A01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 540
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 223 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 282
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 283 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 342
Query: 179 ta 180
||
Sbjct: 343 ta 344
>gb|BF481584.1|BF481584 FM1_21_H05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 508
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 165 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 224
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 225 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 284
Query: 179 ta 180
||
Sbjct: 285 ta 286
>gb|BF585857.1|BF585857 FM1_25_D03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 486
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 149 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 208
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 209 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 268
Query: 179 ta 180
||
Sbjct: 269 ta 270
>gb|BF656718.1|BF656718 OV2_21_A11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 668
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 326 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 385
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 386 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 445
Query: 179 ta 180
||
Sbjct: 446 ta 447
>gb|BF656744.1|BF656744 OV2_21_D06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 557
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 176 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 235
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 236 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 295
Query: 179 ta 180
||
Sbjct: 296 ta 297
>gb|BF705290.1|BF705290 RHIZ2_3_B10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 484
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 221 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 280
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 281 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 340
Query: 179 ta 180
||
Sbjct: 341 ta 342
>gb|BG048510.1|BG048510 OV1_14_D12.g2_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 519
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 290 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 349
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 350 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 409
Query: 179 ta 180
||
Sbjct: 410 ta 411
>gb|BG049847.1|BG049847 FM1_66_F09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 458
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 75 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 134
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 135 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 194
Query: 179 ta 180
||
Sbjct: 195 ta 196
>gb|BG050647.1|BG050647 FM1_70_H09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 553
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 159 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 218
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 219 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 278
Query: 179 ta 180
||
Sbjct: 279 ta 280
>gb|BG052681.1|BG052681 RHIZ2_28_B06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 544
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 161 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 220
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 221 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 280
Query: 179 ta 180
||
Sbjct: 281 ta 282
>gb|BG052682.1|BG052682 RHIZ2_28_B07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 614
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 231 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 290
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 291 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 350
Query: 179 ta 180
||
Sbjct: 351 ta 352
>gb|BG053605.1|BG053605 RHIZ2_11_D11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 623
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 119 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 178
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 179 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 238
Query: 179 ta 180
||
Sbjct: 239 ta 240
>gb|BG053638.1|BG053638 RHIZ2_11_H07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 561
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 164 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 223
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 224 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 283
Query: 179 ta 180
||
Sbjct: 284 ta 285
>gb|BG103119.1|BG103119 RHIZ2_18_D06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 560
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 219 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 278
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 279 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 338
Query: 179 ta 180
||
Sbjct: 339 ta 340
>gb|BG103172.1|BG103172 RHIZ2_19_A09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 651
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 269 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 328
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 329 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 388
Query: 179 ta 180
||
Sbjct: 389 ta 390
>gb|BG103689.1|BG103689 RHIZ2_39_G09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 613
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 274 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 333
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 334 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 393
Query: 179 ta 180
||
Sbjct: 394 ta 395
>gb|BG103695.1|BG103695 RHIZ2_39_H03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 521
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 176 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 235
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 236 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 295
Query: 179 ta 180
||
Sbjct: 296 ta 297
>gb|BG103698.1|BG103698 RHIZ2_39_H06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 664
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 322 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 381
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 382 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 441
Query: 179 ta 180
||
Sbjct: 442 ta 443
>gb|BG158672.1|BG158672 RHIZ2_43_F09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 614
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 224 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 283
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 284 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 343
Query: 179 ta 180
||
Sbjct: 344 ta 345
>gb|BG357438.1|BG357438 OV2_29_H05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 667
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 307 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 366
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 367 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 426
Query: 179 ta 180
||
Sbjct: 427 ta 428
>gb|BG357563.1|BG357563 OV2_31_D12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 701
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 356 gagaagtacacctggaagctctactccgagaggctgatgactctgactggtgtatacgga 415
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 416 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 475
Query: 179 ta 180
||
Sbjct: 476 ta 477
>gb|BG410960.1|BG410960 EM1_28_A09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 702
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 298 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 357
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 358 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 417
Query: 179 ta 180
||
Sbjct: 418 ta 419
>gb|BG465824.1|BG465824 RHIZ2_45_A07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 602
Score = 67.9 bits (34), Expect = 9e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||||||||| |||||| | ||||| |||||| |||||| ||| | || || |||||
Sbjct: 219 gagaagtacacctggaagctctactccgagaggctgatgaccctgactggtgtatacgga 278
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttc 178
||||||||||| ||| || || |||||||| ||||| | ||||||||||||||||||
Sbjct: 279 ttctggaagtatgtgagcaacctggagaggcgtgagacccgccgctaccttgagatgttc 338
Query: 179 ta 180
||
Sbjct: 339 ta 340
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 119,781
Number of Sequences: 832831
Number of extensions: 119781
Number of successful extensions: 33343
Number of sequences better than 0.5: 185
Number of HSP's better than 0.5 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33068
Number of HSP's gapped (non-prelim): 268
length of query: 547
length of database: 491,359,669
effective HSP length: 19
effective length of query: 528
effective length of database: 475,535,880
effective search space: 251082944640
effective search space used: 251082944640
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)