BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943885.2.1
(581 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD224613.1|CD224613 CCC1_35_F08.b1_A007 Callus culture/c... 464 e-129
gb|AW677595.1|AW677595 DG1_8_E07.g1_A002 Dark Grown 1 (DG1)... 176 1e-042
gb|BI643608.1|BI643608 DG1_91_A08.b1_A002 Dark Grown 1 (DG1... 176 1e-042
gb|CW150106.1|CW150106 104_549_11142853_116_36303_057 Sorgh... 174 6e-042
gb|CW150107.1|CW150107 104_549_11142853_148_36304_057 Sorgh... 82 6e-014
gb|BG052249.1|BG052249 RHIZ2_12_A12.g1_A003 Rhizome2 (RHIZ2... 74 2e-011
gb|CW089259.1|CW089259 104_434_10948601_114_32582_071 Sorgh... 70 2e-010
gb|CW409172.1|CW409172 fsbb001f103f24k0 Sorghum methylation... 70 2e-010
gb|CW463308.1|CW463308 fsbb001f211n13f0 Sorghum methylation... 70 2e-010
gb|CD224703.1|CD224703 CCC1_35_F08.g1_A007 Callus culture/c... 70 2e-010
gb|CX607334.1|CX607334 ANR1_8_A10.b1_A002 Anaerobic roots S... 70 2e-010
gb|CX608331.1|CX608331 ANR1_38_B01.b1_A002 Anaerobic roots ... 70 2e-010
gb|CX608499.1|CX608499 ANR1_39_A08.b1_A002 Anaerobic roots ... 70 2e-010
gb|CX623017.1|CX623017 GABR1_67_F09.b1_A002 GA- or brassino... 70 2e-010
gb|CX623201.1|CX623201 GABR1_68_G03.b1_A002 GA- or brassino... 70 2e-010
gb|CW395484.1|CW395484 fsbb001f083i14k0 Sorghum methylation... 68 1e-009
gb|CL189680.1|CL189680 104_407_10905541_116_32481_061 Sorgh... 62 6e-008
gb|CW500380.1|CW500380 fsbb001f295k23k0 Sorghum methylation... 62 6e-008
gb|CN127822.1|CN127822 RHOH1_25_F09.b1_A002 Acid- and alkal... 62 6e-008
gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 62 6e-008
gb|CW089260.1|CW089260 104_434_10948601_115_32586_071 Sorgh... 60 2e-007
gb|CL175246.1|CL175246 104_380_10892299_116_31767_283 Sorgh... 58 9e-007
gb|CW058606.1|CW058606 104_301_10518833_115_30164 Sorghum m... 58 9e-007
gb|CW107875.1|CW107875 104_478_11096833_116_34485_009 Sorgh... 58 9e-007
gb|CW222899.1|CW222899 104_658_11202620_116_37184_072 Sorgh... 58 9e-007
gb|CW283440.1|CW283440 104_759_11409248_148_35476_018 Sorgh... 58 9e-007
gb|CW387248.1|CW387248 fsbb001f071i06f0 Sorghum methylation... 58 9e-007
gb|CW392765.1|CW392765 fsbb001f079i12k0 Sorghum methylation... 58 9e-007
gb|CW395483.1|CW395483 fsbb001f083i14f0 Sorghum methylation... 58 9e-007
gb|CW424419.1|CW424419 fsbb001f134l24f0 Sorghum methylation... 58 9e-007
gb|CW432748.1|CW432748 fsbb001f147k02f0 Sorghum methylation... 58 9e-007
gb|BE126076.1|BE126076 DG1_65_E03.g1_A002 Dark Grown 1 (DG1... 58 9e-007
gb|BE355481.1|BE355481 DG1_114_G09.g1_A002 Dark Grown 1 (DG... 58 9e-007
gb|BE358427.1|BE358427 DG1_29_F10.g1_A002 Dark Grown 1 (DG1... 58 9e-007
gb|BE362888.2|BE362888 DG1_90_B11.g1_A002 Dark Grown 1 (DG1... 58 9e-007
gb|CB927938.1|CB927938 ABA1_35_B08.b1_A012 Abscisic acid-tr... 58 9e-007
gb|CB928778.1|CB928778 ABA1_24_C06.b1_A012 Abscisic acid-tr... 58 9e-007
gb|CD424348.1|CD424348 SA1_5_E09.b1_A002 Salicylic acid-tre... 58 9e-007
gb|CN130398.1|CN130398 RHOH1_41_F02.b1_A002 Acid- and alkal... 58 9e-007
gb|CN133765.1|CN133765 OX1_18_E06.b1_A002 Oxidatively-stres... 58 9e-007
gb|CN141229.1|CN141229 OX1_50_D06.b1_A002 Oxidatively-stres... 58 9e-007
gb|CN148075.1|CN148075 WOUND1_54_C02.b1_A002 Wounded leaves... 58 9e-007
gb|CX616980.1|CX616980 GABR1_31_B05.b1_A002 GA- or brassino... 58 9e-007
gb|CW115454.1|CW115454 104_490_11106569_116_34592_069 Sorgh... 56 4e-006
gb|CW130771.1|CW130771 104_513_11115302_116_34783_057 Sorgh... 56 4e-006
gb|CW180651.1|CW180651 104_595_11163067_116_36641_076 Sorgh... 56 4e-006
gb|CW223631.1|CW223631 104_659_11203019_116_37185_038 Sorgh... 56 4e-006
gb|CW223632.1|CW223632 104_659_11203019_148_37186_038 Sorgh... 56 4e-006
gb|CW262205.1|CW262205 104_729_11229928_116_35210_054 Sorgh... 56 4e-006
gb|CF489797.1|CF489797 POL1_59_E03.g1_A002 Pollen Sorghum b... 56 4e-006
gb|CL187365.1|CL187365 104_402_10900827_114_32432_002 Sorgh... 54 1e-005
gb|CL187366.1|CL187366 104_402_10900827_116_32436_002 Sorgh... 54 1e-005
gb|CW157678.1|CW157678 104_561_11147653_116_36391_061 Sorgh... 54 1e-005
gb|CW214421.1|CW214421 104_646_11194008_148_37053_090 Sorgh... 54 1e-005
gb|CW363376.1|CW363376 fsbb001f034p04k0 Sorghum methylation... 54 1e-005
gb|CW473657.1|CW473657 fsbb001f229c07f0 Sorghum methylation... 54 1e-005
gb|CW501587.1|CW501587 fsbb001f297h15k0 Sorghum methylation... 54 1e-005
gb|CD207584.1|CD207584 HS1_33_G09.g1_A012 Heat-shocked seed... 54 1e-005
gb|BZ335976.1|BZ335976 hz27h12.b1 WGS-SbicolorF (JM107 adap... 52 6e-005
gb|BZ351665.1|BZ351665 hw05b10.g1 WGS-SbicolorF (JM107 adap... 52 6e-005
gb|CL147747.1|CL147747 104_327_10592607_116_31781_115 Sorgh... 52 6e-005
gb|CL188255.1|CL188255 104_404_10901465_116_32448_071 Sorgh... 52 6e-005
gb|CL193465.1|CL193465 104_417_10940951_116_32278_094 Sorgh... 52 6e-005
gb|CW024022.1|CW024022 104_164_10434714_1_30002 Sorghum met... 52 6e-005
gb|CW097799.1|CW097799 104_464_11002660_148_34365_014 Sorgh... 52 6e-005
gb|CW136399.1|CW136399 104_521_11118359_148_34840_090 Sorgh... 52 6e-005
gb|CW264348.1|CW264348 104_733_11231241_148_35249_045 Sorgh... 52 6e-005
gb|CW288258.1|CW288258 104_766_11411855_148_35535_086 Sorgh... 52 6e-005
gb|CW355391.1|CW355391 fsbb001f020a02f0 Sorghum methylation... 52 6e-005
gb|CW385470.1|CW385470 fsbb001f068p12f0 Sorghum methylation... 52 6e-005
gb|CW385471.1|CW385471 fsbb001f068p12k0 Sorghum methylation... 52 6e-005
gb|CW404738.1|CW404738 fsbb001f097a06f0 Sorghum methylation... 52 6e-005
gb|CW404739.1|CW404739 fsbb001f097a06k0 Sorghum methylation... 52 6e-005
gb|CW434530.1|CW434530 fsbb001f150e10k0 Sorghum methylation... 52 6e-005
gb|CW434797.1|CW434797 fsbb001f150k16k0 Sorghum methylation... 52 6e-005
gb|CW445252.1|CW445252 fsbb001f170e15k0 Sorghum methylation... 52 6e-005
gb|CW449893.1|CW449893 fsbb001f188e03k0 Sorghum methylation... 52 6e-005
gb|CW472599.1|CW472599 fsbb001f227j19k0 Sorghum methylation... 52 6e-005
gb|CW495508.1|CW495508 fsbb001f287e23k0 Sorghum methylation... 52 6e-005
gb|CW496448.1|CW496448 fsbb001f288l08k0 Sorghum methylation... 52 6e-005
gb|BE355032.1|BE355032 DG1_10_A04.g1_A002 Dark Grown 1 (DG1... 52 6e-005
gb|BE358440.1|BE358440 DG1_29_G10.g1_A002 Dark Grown 1 (DG1... 52 6e-005
gb|BE595691.1|BE595691 PI1_55_E01.g1_A002 Pathogen induced ... 52 6e-005
gb|BG323036.1|BG323036 EM1_14_B07.g1_A002 Embryo 1 (EM1) So... 52 6e-005
gb|BG410775.1|BG410775 EM1_25_F05.g1_A002 Embryo 1 (EM1) So... 52 6e-005
gb|CB926451.1|CB926451 ABA1_9_A08.b1_A012 Abscisic acid-tre... 52 6e-005
gb|CB926634.1|CB926634 ABA1_3_D04.b1_A012 Abscisic acid-tre... 52 6e-005
gb|CB928358.1|CB928358 ABA1_15_H11.b1_A012 Abscisic acid-tr... 52 6e-005
gb|CD212039.1|CD212039 HS1_68_G01.b1_A012 Heat-shocked seed... 52 6e-005
gb|CD221508.1|CD221508 CCC1_55_C03.b1_A007 Callus culture/c... 52 6e-005
gb|CD227847.1|CD227847 CCC1_56_A04.b1_A007 Callus culture/c... 52 6e-005
gb|CD228503.1|CD228503 CCC1_8_D11.b1_A007 Callus culture/ce... 52 6e-005
gb|CD428859.1|CD428859 ETH1_1_C11.b1_A002 Ethylene-treated ... 52 6e-005
gb|CN141745.1|CN141745 WOUND1_1_C12.g1_A002 Wounded leaves ... 52 6e-005
gb|CN144834.1|CN144834 WOUND1_25_E11.b2_A002 Wounded leaves... 52 6e-005
gb|CN144845.1|CN144845 WOUND1_25_G01.b2_A002 Wounded leaves... 52 6e-005
gb|CX607843.1|CX607843 ANR1_31_C11.b1_A002 Anaerobic roots ... 52 6e-005
gb|CX613268.1|CX613268 GABR1_7_E10.b1_A002 GA- or brassinol... 52 6e-005
gb|CX616004.1|CX616004 GABR1_25_F09.b1_A002 GA- or brassino... 52 6e-005
gb|CX617551.1|CX617551 GABR1_34_H10.b1_A002 GA- or brassino... 52 6e-005
gb|CX618886.1|CX618886 GABR1_42_F03.b1_A002 GA- or brassino... 52 6e-005
gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete seq... 52 6e-005
gb|BZ340250.1|BZ340250 ic37f08.b1 WGS-SbicolorF (JM107 adap... 50 2e-004
gb|CL149321.1|CL149321 104_330_10777748_114_31353_068 Sorgh... 50 2e-004
gb|CL154714.1|CL154714 104_340_10781602_116_31470_082 Sorgh... 50 2e-004
gb|CW056988.1|CW056988 104_298_10517976_115_30157 Sorghum m... 50 2e-004
gb|CW095662.1|CW095662 104_460_11001451_116_34326_066 Sorgh... 50 2e-004
gb|CW159792.1|CW159792 104_566_11149541_116_36421_029 Sorgh... 50 2e-004
gb|CW233283.1|CW233283 104_686_11213310_116_37376_025 Sorgh... 50 2e-004
gb|CW273802.1|CW273802 104_746_11404095_116_35362_056 Sorgh... 50 2e-004
gb|CW370930.1|CW370930 fsbb001f046c06k0 Sorghum methylation... 50 2e-004
gb|CW408694.1|CW408694 fsbb001f102l04f0 Sorghum methylation... 50 2e-004
gb|CW476248.1|CW476248 fsbb001f233a10f0 Sorghum methylation... 50 2e-004
gb|AW923519.1|AW923519 DG1_52_C12.g1_A002 Dark Grown 1 (DG1... 50 2e-004
gb|BE599295.1|BE599295 PI1_87_G04.g1_A002 Pathogen induced ... 50 2e-004
gb|BG241163.1|BG241163 OV1_39_A04.b1_A002 Ovary 1 (OV1) Sor... 50 2e-004
gb|BE364586.2|BE364586 PI1_15_G08.g1_A002 Pathogen induced ... 50 2e-004
gb|CB928346.1|CB928346 ABA1_15_C06.b1_A012 Abscisic acid-tr... 50 2e-004
gb|CL147748.1|CL147748 104_327_10592607_148_31780_115 Sorgh... 48 0.001
gb|CW021606.1|CW021606 104_160_10431360_1_30004 Sorghum met... 48 0.001
gb|CW069511.1|CW069511 104_319_10525937_1_30093 Sorghum met... 48 0.001
gb|CW096606.1|CW096606 104_462_11001990_148_34353_025 Sorgh... 48 0.001
gb|CW144279.1|CW144279 104_536_11137858_116_34967_041 Sorgh... 48 0.001
gb|CW220432.1|CW220432 104_655_11197347_116_37153_014 Sorgh... 48 0.001
gb|CW220433.1|CW220433 104_655_11197347_148_37154_014 Sorgh... 48 0.001
gb|CW241136.1|CW241136 104_700_11218601_116_37545_077 Sorgh... 48 0.001
gb|CW247759.1|CW247759 104_708_11221938_116_35018_065 Sorgh... 48 0.001
gb|CW279975.1|CW279975 104_755_11407368_116_35442_096 Sorgh... 48 0.001
gb|CW338052.1|CW338052 104_838_11484537_148_36123_043 Sorgh... 48 0.001
gb|CW365814.1|CW365814 fsbb001f038i09f0 Sorghum methylation... 48 0.001
gb|CW365815.1|CW365815 fsbb001f038i09k0 Sorghum methylation... 48 0.001
gb|CW391036.1|CW391036 fsbb001f076p16f0 Sorghum methylation... 48 0.001
gb|CW395395.1|CW395395 fsbb001f083g14k0 Sorghum methylation... 48 0.001
gb|CW437515.1|CW437515 fsbb001f154k21f0 Sorghum methylation... 48 0.001
gb|CW442651.1|CW442651 fsbb001f162g15k0 Sorghum methylation... 48 0.001
gb|CW461886.1|CW461886 fsbb001f209m04f0 Sorghum methylation... 48 0.001
gb|CW471505.1|CW471505 fsbb001f225h10f0 Sorghum methylation... 48 0.001
gb|CW479719.1|CW479719 fsbb001f238g06k0 Sorghum methylation... 48 0.001
gb|CW480630.1|CW480630 fsbb001f239m17k0 Sorghum methylation... 48 0.001
gb|CW483111.1|CW483111 fsbb001f244j08f0 Sorghum methylation... 48 0.001
gb|CW493408.1|CW493408 fsbb001f284c16f0 Sorghum methylation... 48 0.001
gb|CW498960.1|CW498960 fsbb001f293h15f0 Sorghum methylation... 48 0.001
gb|CW498961.1|CW498961 fsbb001f293h15k0 Sorghum methylation... 48 0.001
gb|BE357034.1|BE357034 DG1_146_G10.b1_A002 Dark Grown 1 (DG... 48 0.001
gb|BE357084.1|BE357084 DG1_146_G10.g1_A002 Dark Grown 1 (DG... 48 0.001
gb|BE357349.1|BE357349 DG1_148_C05.g1_A002 Dark Grown 1 (DG... 48 0.001
gb|BE596599.1|BE596599 PI1_58_B10.g1_A002 Pathogen induced ... 48 0.001
gb|CF427831.1|CF427831 PH1_11_E10.b1_A002 Phosphorous-defic... 48 0.001
gb|CN124792.1|CN124792 RHOH1_7_A02.b1_A002 Acid- and alkali... 48 0.001
gb|CN130059.1|CN130059 RHOH1_39_B11.b1_A002 Acid- and alkal... 48 0.001
gb|BZ781167.1|BZ781167 ii24g06.g1 WGS-SbicolorF (DH5a methy... 46 0.004
gb|CL149078.1|CL149078 104_329_10593534_148_31784_274 Sorgh... 46 0.004
gb|CF487063.1|CF487063 POL1_41_B10.g1_A002 Pollen Sorghum b... 46 0.004
gb|BZ345492.1|BZ345492 hr51h05.b1 WGS-SbicolorF (JM107 adap... 44 0.014
gb|BZ366101.1|BZ366101 ic94f06.g1 WGS-SbicolorF (JM107 adap... 44 0.014
gb|CL154940.1|CL154940 104_340_10781755_116_31470_235 Sorgh... 44 0.014
gb|CL159037.1|CL159037 104_348_10803969_116_31380_177 Sorgh... 44 0.014
gb|CL187943.1|CL187943 104_404_10901247_114_32442_064 Sorgh... 44 0.014
gb|CL187944.1|CL187944 104_404_10901247_116_32446_064 Sorgh... 44 0.014
gb|CL190026.1|CL190026 104_407_10905785_116_32481_067 Sorgh... 44 0.014
gb|CW027952.1|CW027952 104_254_10498806_116_30396 Sorghum m... 44 0.014
gb|CW084020.1|CW084020 104_426_10945525_116_32440_055 Sorgh... 44 0.014
gb|CW089827.1|CW089827 104_435_10948933_116_32594_057 Sorgh... 44 0.014
gb|CW091182.1|CW091182 104_453_10998407_114_33028_096 Sorgh... 44 0.014
gb|CW091183.1|CW091183 104_453_10998407_116_33032_096 Sorgh... 44 0.014
gb|CW105968.1|CW105968 104_475_11013160_116_34457_058 Sorgh... 44 0.014
gb|CW110223.1|CW110223 104_482_11103569_116_34509_065 Sorgh... 44 0.014
gb|CW171881.1|CW171881 104_582_11155977_148_36526_033 Sorgh... 44 0.014
gb|CW173832.1|CW173832 104_585_11157062_116_36557_053 Sorgh... 44 0.014
gb|CW186267.1|CW186267 104_604_11166477_148_36710_093 Sorgh... 44 0.014
gb|CW249524.1|CW249524 104_711_11222896_148_35046_058 Sorgh... 44 0.014
gb|CW253228.1|CW253228 104_716_11224968_148_35099_084 Sorgh... 44 0.014
gb|CW265350.1|CW265350 104_734_11231825_148_35261_069 Sorgh... 44 0.014
gb|CW265845.1|CW265845 104_735_11232105_116_35269_041 Sorgh... 44 0.014
gb|CW270523.1|CW270523 104_742_11402473_116_35332_011 Sorgh... 44 0.014
gb|CW278981.1|CW278981 104_753_11406838_116_35426_085 Sorgh... 44 0.014
gb|CW310548.1|CW310548 104_799_11469772_116_35746_004 Sorgh... 44 0.014
gb|CW346601.1|CW346601 fsbb001f006d02f0 Sorghum methylation... 44 0.014
gb|CW351075.1|CW351075 fsbb001f012k24f0 Sorghum methylation... 44 0.014
gb|CW351160.1|CW351160 fsbb001f012m22f0 Sorghum methylation... 44 0.014
gb|CW477959.1|CW477959 fsbb001f235j04f0 Sorghum methylation... 44 0.014
gb|BG465262.1|BG465262 EM1_74_A07.g1_A002 Embryo 1 (EM1) So... 44 0.014
gb|CB927624.1|CB927624 ABA1_27_F06.b1_A012 Abscisic acid-tr... 44 0.014
gb|CD203746.1|CD203746 HS1_1_B01.g1_A012 Heat-shocked seedl... 44 0.014
gb|CD229006.1|CD229006 CCC1_11_D05.b1_A007 Callus culture/c... 44 0.014
gb|CD235693.1|CD235693 SS1_37_G12.b1_A012 Salt-stressed see... 44 0.014
gb|CF434115.1|CF434115 NIT1_32_A09.b1_A002 Nitrogen-deficie... 44 0.014
gb|CX609667.1|CX609667 ANR1_14_B08.b1_A002 Anaerobic roots ... 44 0.014
gb|CX622089.1|CX622089 GABR1_62_A08.b2_A002 GA- or brassino... 44 0.014
gb|BZ333861.1|BZ333861 hx74f04.g1 WGS-SbicolorF (JM107 adap... 42 0.056
gb|CL193419.1|CL193419 104_417_10940920_116_32282_064 Sorgh... 42 0.056
gb|CW039097.1|CW039097 104_271_10505296_115_30388 Sorghum m... 42 0.056
gb|CW041558.1|CW041558 104_275_10506614_115_30285 Sorghum m... 42 0.056
gb|CW064664.1|CW064664 104_311_10522696_115_30121 Sorghum m... 42 0.056
gb|CW103800.1|CW103800 104_472_11012084_116_34431_070 Sorgh... 42 0.056
gb|CW103801.1|CW103801 104_472_11012084_148_34435_070 Sorgh... 42 0.056
gb|CW173419.1|CW173419 104_585_11156835_148_36550_014 Sorgh... 42 0.056
gb|CW208733.1|CW208733 104_638_11188843_148_36982_074 Sorgh... 42 0.056
gb|CW221425.1|CW221425 104_656_11197899_116_37452_008 Sorgh... 42 0.056
gb|CW234267.1|CW234267 104_687_11213889_148_37382_033 Sorgh... 42 0.056
gb|CW239896.1|CW239896 104_698_11217909_116_37504_089 Sorgh... 42 0.056
gb|CW239897.1|CW239897 104_698_11217909_148_37505_089 Sorgh... 42 0.056
gb|CW249523.1|CW249523 104_711_11222896_116_35042_058 Sorgh... 42 0.056
gb|CW277776.1|CW277776 104_752_11406206_148_35418_063 Sorgh... 42 0.056
gb|CW296771.1|CW296771 104_778_11461693_116_35628_051 Sorgh... 42 0.056
gb|CW296772.1|CW296772 104_778_11461693_148_35632_051 Sorgh... 42 0.056
gb|CW313572.1|CW313572 104_803_11471355_116_35786_002 Sorgh... 42 0.056
gb|CW313573.1|CW313573 104_803_11471355_148_35790_002 Sorgh... 42 0.056
gb|CW316549.1|CW316549 104_808_11472951_116_35853_064 Sorgh... 42 0.056
gb|CW366382.1|CW366382 fsbb001f039f21k0 Sorghum methylation... 42 0.056
gb|CW394220.1|CW394220 fsbb001f081l05k0 Sorghum methylation... 42 0.056
gb|CW405793.1|CW405793 fsbb001f098i04k0 Sorghum methylation... 42 0.056
gb|CW439050.1|CW439050 fsbb001f156p22f0 Sorghum methylation... 42 0.056
gb|CW467955.1|CW467955 fsbb001f219n18f0 Sorghum methylation... 42 0.056
gb|CW496055.1|CW496055 fsbb001f288b11k0 Sorghum methylation... 42 0.056
gb|BE356265.1|BE356265 DG1_123_A04.g1_A002 Dark Grown 1 (DG... 42 0.056
gb|BE360432.1|BE360432 DG1_63_A06.g1_A002 Dark Grown 1 (DG1... 42 0.056
gb|CB925266.1|CB925266 ABA1_32_F07.b1_A012 Abscisic acid-tr... 42 0.056
gb|CB925748.1|CB925748 ABA1_23_C10.b1_A012 Abscisic acid-tr... 42 0.056
gb|CB926347.1|CB926347 ABA1_8_G03.b1_A012 Abscisic acid-tre... 42 0.056
gb|CB926950.1|CB926950 ABA1_11_B02.b1_A012 Abscisic acid-tr... 42 0.056
gb|CB927803.1|CB927803 ABA1_34_B03.b1_A012 Abscisic acid-tr... 42 0.056
gb|CD426207.1|CD426207 SA1_19_E09.b1_A002 Salicylic acid-tr... 42 0.056
gb|CF073799.1|CF073799 FE1_12_E11.b1_A002 Iron-deficient se... 42 0.056
gb|CF428156.1|CF428156 PH1_13_G05.b1_A002 Phosphorous-defic... 42 0.056
gb|CF433443.1|CF433443 NIT1_27_C07.b1_A002 Nitrogen-deficie... 42 0.056
gb|CN138029.1|CN138029 OX1_61_F11.b1_A002 Oxidatively-stres... 42 0.056
gb|CN138113.1|CN138113 OX1_61_F11.g1_A002 Oxidatively-stres... 42 0.056
gb|CX614147.1|CX614147 GABR1_12_H01.b1_A002 GA- or brassino... 42 0.056
gb|CX616312.1|CX616312 GABR1_27_E04.b1_A002 GA- or brassino... 42 0.056
gb|AC169376.1| Sorghum bicolor clone SB_BBc0046M17, WORKING... 42 0.056
gb|BZ336790.1|BZ336790 hz39c04.b1 WGS-SbicolorF (JM107 adap... 40 0.22
gb|BZ349842.1|BZ349842 hr46d12.g1 WGS-SbicolorF (JM107 adap... 40 0.22
gb|CL193464.1|CL193464 104_417_10940951_114_32273_094 Sorgh... 40 0.22
gb|CW170482.1|CW170482 104_580_11155228_148_36515_002 Sorgh... 40 0.22
gb|CW179114.1|CW179114 104_593_11159929_116_36625_013 Sorgh... 40 0.22
gb|CW179115.1|CW179115 104_593_11159929_148_36629_013 Sorgh... 40 0.22
gb|CW192396.1|CW192396 104_614_11178999_116_36947_052 Sorgh... 40 0.22
gb|CW230821.1|CW230821 104_679_11210793_116_37484_033 Sorgh... 40 0.22
gb|CW232538.1|CW232538 104_685_11212872_148_37363_092 Sorgh... 40 0.22
gb|CW242224.1|CW242224 104_701_11219215_148_37556_020 Sorgh... 40 0.22
gb|CW367740.1|CW367740 fsbb001f041f15k0 Sorghum methylation... 40 0.22
gb|CW369188.1|CW369188 fsbb001f043h22k0 Sorghum methylation... 40 0.22
gb|CW392865.1|CW392865 fsbb001f079k21k0 Sorghum methylation... 40 0.22
gb|CW429668.1|CW429668 fsbb001f143a19k0 Sorghum methylation... 40 0.22
gb|CW486745.1|CW486745 fsbb001f252d07f0 Sorghum methylation... 40 0.22
gb|AW922352.1|AW922352 DG1_18_B03.g1_A002 Dark Grown 1 (DG1... 40 0.22
gb|BE360604.1|BE360604 DG1_64_C05.g1_A002 Dark Grown 1 (DG1... 40 0.22
gb|CB924782.1|CB924782 ABA1_28_A10.b1_A012 Abscisic acid-tr... 40 0.22
gb|CB925277.1|CB925277 ABA1_32_G09.b1_A012 Abscisic acid-tr... 40 0.22
gb|CB925757.1|CB925757 ABA1_23_D07.b1_A012 Abscisic acid-tr... 40 0.22
gb|CB926025.1|CB926025 ABA1_31_C05.b1_A012 Abscisic acid-tr... 40 0.22
gb|CB926468.1|CB926468 ABA1_9_A12.b1_A012 Abscisic acid-tre... 40 0.22
gb|CB927906.1|CB927906 ABA1_35_H12.b1_A012 Abscisic acid-tr... 40 0.22
gb|CB928174.1|CB928174 ABA1_37_G08.b1_A012 Abscisic acid-tr... 40 0.22
gb|CB928208.1|CB928208 ABA1_37_D08.b1_A012 Abscisic acid-tr... 40 0.22
gb|CB928773.1|CB928773 ABA1_24_A12.b1_A012 Abscisic acid-tr... 40 0.22
gb|CB928928.1|CB928928 ABA1_38_H04.b1_A012 Abscisic acid-tr... 40 0.22
gb|CD222115.1|CD222115 CCC1_2_B08.b1_A007 Callus culture/ce... 40 0.22
gb|CD223441.1|CD223441 CCC1_28_C05.b1_A007 Callus culture/c... 40 0.22
gb|CD428798.1|CD428798 ETH1_36_E07.b1_A002 Ethylene-treated... 40 0.22
gb|CF427041.1|CF427041 PH1_3_B07.b1_A002 Phosphorous-defici... 40 0.22
gb|CN129257.1|CN129257 RHOH1_34_H10.b3_A002 Acid- and alkal... 40 0.22
gb|CN137262.1|CN137262 OX1_56_E07.b1_A002 Oxidatively-stres... 40 0.22
gb|CN149017.1|CN149017 WOUND1_60_F03.b1_A002 Wounded leaves... 40 0.22
gb|CX609512.1|CX609512 ANR1_13_D09.b1_A002 Anaerobic roots ... 40 0.22
gb|CX610524.1|CX610524 ANR1_19_F04.b1_A002 Anaerobic roots ... 40 0.22
gb|CX612253.1|CX612253 GABR1_1_H09.b1_A002 GA- or brassinol... 40 0.22
gb|CX618036.1|CX618036 GABR1_37_G11.b1_A002 GA- or brassino... 40 0.22
gb|CX618359.1|CX618359 GABR1_39_D05.b1_A002 GA- or brassino... 40 0.22
gb|CX619180.1|CX619180 GABR1_44_A07.b1_A002 GA- or brassino... 40 0.22
>gb|CD224613.1|CD224613 CCC1_35_F08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_35_F08_A007 3', mRNA sequence
Length = 609
Score = 464 bits (234), Expect = e-129
Identities = 391/442 (88%), Gaps = 6/442 (1%)
Strand = Plus / Plus
Query: 57 gggtgctgaggtccaacgaggcagaaaaactgtctcgacagctcggtggcaggtgcaagg 116
|||||||||||||| |||||||||| || |||||||| |||||||| |||| ||||||||
Sbjct: 1 gggtgctgaggtccgacgaggcagagaagctgtctcggcagctcggcggcaagtgcaagg 60
Query: 117 aaaggggcctcattgtccccttctgtcctcagctcgaggtgctggcacacaaggccacag 176
| | ||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 agaagggcctcgttgtgcccttctgtcctcagcttgaggtgctggcacacaaggccacag 120
Query: 177 gttgcttcctgacgcactgcgggtggaactcgacgattgaatccatcgctagtggtgttc 236
||||||||||||||||||| ||||||||||||||||| || ||||| || | ||||||||
Sbjct: 121 gttgcttcctgacgcactgtgggtggaactcgacgatcgagtccatggccactggtgttc 180
Query: 237 caatggtggcgatgccccagtgggcggaccagccgacgacggccaaatatgtggagagcg 296
|||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 caatggcggcgatgccgcagtgggcggaccagccgacgacggccaagtatgtggagagcg 240
Query: 297 cgtgggggattggggtgcgcatgcggaagggttccttggtgagga---aggaggtggaga 353
| ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 241 catgggggattggggtgcggatgcggaaggg---cttggtgaggagggaggaggtggaga 297
Query: 354 ggtgcataagggaggtgatgggcggggagaggaagcatgtgtacgggaggaatgccgctc 413
||||||| |||||||||||| |||||||||||| ||| || | || ||| || ||
Sbjct: 298 ggtgcatccgggaggtgatggaaggggagaggaaggatgagttcaggcagaacgcggcga 357
Query: 414 gttggatgcacaaggccaaggaggccatgcaggaaggaggaagctctgacaagaacattg 473
| |||||| | ||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 358 gatggatgaagaaggccaaggaagcgatgcaggaaggagggagctctgacaagaacattg 417
Query: 474 cagaattcgcagccaagtattt 495
| ||||| ||||| ||||||||
Sbjct: 418 ctgaatttgcagcaaagtattt 439
>gb|AW677595.1|AW677595 DG1_8_E07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 530
Score = 176 bits (89), Expect = 1e-042
Identities = 158/181 (87%)
Strand = Plus / Plus
Query: 337 gaggaaggaggtggagaggtgcataagggaggtgatgggcggggagaggaagcatgtgta 396
|||| ||||||||||||||||||| |||||||||||| |||||||||||| ||| ||
Sbjct: 230 gagggaggaggtggagaggtgcatccgggaggtgatggaaggggagaggaaggatgagtt 289
Query: 397 cgggaggaatgccgctcgttggatgcacaaggccaaggaggccatgcaggaaggaggaag 456
| || |||||| || | |||||| | ||||||||||| || |||||||||||||| ||
Sbjct: 290 caggcagaatgcggcgagatggatgaagaaggccaaggaagcgatgcaggaaggagggag 349
Query: 457 ctctgacaagaacattgcagaattcgcagccaagtatttaccaaagtagatttccgatta 516
|||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 350 ctctgacaagaacattgctgaatttgcagcaaagtatttaccaaagtagatttccgatta 409
Query: 517 t 517
|
Sbjct: 410 t 410
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 167 aaggccacaggttgcttcctgacgcactgcgggtggaactcgacga 212
||||||||||| |||||| | |||||||||||||||||||||||||
Sbjct: 51 aaggccacaggctgcttcatcacgcactgcgggtggaactcgacga 96
Score = 48.1 bits (24), Expect = 0.001
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 259 ggcggaccagccgacgacggccaaatatgtggagagcgcgtgggggat 306
|||||||||||| ||| |||| || || ||||||||||||||| ||||
Sbjct: 143 ggcggaccagccaacggcggcgaagtacgtggagagcgcgtggaggat 190
>gb|BI643608.1|BI643608 DG1_91_A08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 484
Score = 176 bits (89), Expect = 1e-042
Identities = 158/181 (87%)
Strand = Plus / Minus
Query: 337 gaggaaggaggtggagaggtgcataagggaggtgatgggcggggagaggaagcatgtgta 396
|||| ||||||||||||||||||| |||||||||||| |||||||||||| ||| ||
Sbjct: 352 gagggaggaggtggagaggtgcatccgggaggtgatggaaggggagaggaaggatgagtt 293
Query: 397 cgggaggaatgccgctcgttggatgcacaaggccaaggaggccatgcaggaaggaggaag 456
| || |||||| || | |||||| | ||||||||||| || |||||||||||||| ||
Sbjct: 292 caggcagaatgcggcgagatggatgaagaaggccaaggaagcgatgcaggaaggagggag 233
Query: 457 ctctgacaagaacattgcagaattcgcagccaagtatttaccaaagtagatttccgatta 516
|||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 232 ctctgacaagaacattgctgaatttgcagcaaagtatttaccaaagtagatttccgatta 173
Query: 517 t 517
|
Sbjct: 172 t 172
Score = 48.1 bits (24), Expect = 0.001
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 259 ggcggaccagccgacgacggccaaatatgtggagagcgcgtgggggat 306
|||||||||||| ||| |||| || || ||||||||||||||| ||||
Sbjct: 439 ggcggaccagccaacggcggcgaagtacgtggagagcgcgtggaggat 392
>gb|CW150106.1|CW150106 104_549_11142853_116_36303_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142853, DNA
sequence
Length = 658
Score = 174 bits (88), Expect = 6e-042
Identities = 157/180 (87%)
Strand = Plus / Minus
Query: 337 gaggaaggaggtggagaggtgcataagggaggtgatgggcggggagaggaagcatgtgta 396
|||| ||||||||||||||||||| |||||||||||| |||||||||||| ||| ||
Sbjct: 180 gagggaggaggtggagaggtgcatccgggaggtgatggaaggggagaggaaggatgagtt 121
Query: 397 cgggaggaatgccgctcgttggatgcacaaggccaaggaggccatgcaggaaggaggaag 456
| || |||||| || | |||||| | ||||||||||| || |||||||||||||| ||
Sbjct: 120 caggcagaatgcggcgagatggatgaagaaggccaaggaagcgatgcaggaaggagggag 61
Query: 457 ctctgacaagaacattgcagaattcgcagccaagtatttaccaaagtagatttccgatta 516
|||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 60 ctctgacaagaacattgctgaatttgcagcaaagtatttaccaaagtagatttccgatta 1
Score = 81.8 bits (41), Expect = 6e-014
Identities = 161/201 (80%)
Strand = Plus / Minus
Query: 12 acgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtcca 71
|||||||||||| ||| |||||||||||||||| ||| ||| | ||||| ||||||||
Sbjct: 514 acgagctcggcagcgggctgtgcgattccggcaggcccttcatctgggtcgtgaggtccg 455
Query: 72 acgaggcagaaaaactgtctcgacagctcggtggcaggtgcaaggaaaggggcctcattg 131
|||||| | || ||||| | | | ||||| | ||||||| ||| | ||||||||| |
Sbjct: 454 gcgaggcgcagaagctgtcccaagacctcggcgagaggtgcagggagaagggcctcatcg 395
Query: 132 tccccttctgtcctcagctcgaggtgctggcacacaaggccacaggttgcttcctgacgc 191
| ||| || |||||||| || || || | || ||||||||||| |||||| | ||||
Sbjct: 394 tgtcctggtgccctcagctagatgtcttgtcgcataaggccacaggctgcttcatcacgc 335
Query: 192 actgcgggtggaactcgacga 212
|||||||||||||||||||||
Sbjct: 334 actgcgggtggaactcgacga 314
Score = 48.1 bits (24), Expect = 0.001
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 259 ggcggaccagccgacgacggccaaatatgtggagagcgcgtgggggat 306
|||||||||||| ||| |||| || || ||||||||||||||| ||||
Sbjct: 267 ggcggaccagccaacggcggcgaagtacgtggagagcgcgtggaggat 220
>gb|CW150107.1|CW150107 104_549_11142853_148_36304_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142853, DNA
sequence
Length = 701
Score = 81.8 bits (41), Expect = 6e-014
Identities = 161/201 (80%)
Strand = Plus / Plus
Query: 12 acgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtcca 71
|||||||||||| ||| |||||||||||||||| ||| ||| | ||||| ||||||||
Sbjct: 262 acgagctcggcagcgggctgtgcgattccggcaggcccttcatctgggtcgtgaggtccg 321
Query: 72 acgaggcagaaaaactgtctcgacagctcggtggcaggtgcaaggaaaggggcctcattg 131
|||||| | || ||||| | | | ||||| | ||||||| ||| | ||||||||| |
Sbjct: 322 gcgaggcgcagaagctgtcccaagacctcggcgagaggtgcagggagaagggcctcatcg 381
Query: 132 tccccttctgtcctcagctcgaggtgctggcacacaaggccacaggttgcttcctgacgc 191
| ||| || |||||||| || || || | || ||||||||||| |||||| | ||||
Sbjct: 382 tgtcctggtgccctcagctagatgtcttgtcgcataaggccacaggctgcttcatcacgc 441
Query: 192 actgcgggtggaactcgacga 212
|||||||||||||||||||||
Sbjct: 442 actgcgggtggaactcgacga 462
Score = 63.9 bits (32), Expect = 2e-008
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 337 gaggaaggaggtggagaggtgcataagggaggtgatgggcggggagaggaag 388
|||| ||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 596 gagggaggaggtggagaggtgcatccgggaggtgatggaaggggagaggaag 647
Score = 48.1 bits (24), Expect = 0.001
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 259 ggcggaccagccgacgacggccaaatatgtggagagcgcgtgggggat 306
|||||||||||| ||| |||| || || ||||||||||||||| ||||
Sbjct: 509 ggcggaccagccaacggcggcgaagtacgtggagagcgcgtggaggat 556
>gb|BG052249.1|BG052249 RHIZ2_12_A12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 527
Score = 73.8 bits (37), Expect = 2e-011
Identities = 160/201 (79%)
Strand = Plus / Plus
Query: 12 acgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtcca 71
|||||||||||| ||| |||||||||||||||| ||| ||| | ||||| ||||||||
Sbjct: 136 acgagctcggcagcgggctgtgcgattccggcaggcccttcatctgggtcgtgaggtccg 195
Query: 72 acgaggcagaaaaactgtctcgacagctcggtggcaggtgcaaggaaaggggcctcattg 131
|||||| | || ||||| | | | ||||| | ||||||| ||| | ||||||||| |
Sbjct: 196 gcgaggcgcagaagctgtcccaagacctcggcgagaggtgcagggagaagggcctcatcg 255
Query: 132 tccccttctgtcctcagctcgaggtgctggcacacaaggccacaggttgcttcctgacgc 191
| ||| || |||||||| || || || | || |||||||| || |||||| | ||||
Sbjct: 256 tgtcctggtgccctcagctagatgtcttgtcgcataaggccacgggctgcttcatcacgc 315
Query: 192 actgcgggtggaactcgacga 212
|||||||||||||||||||||
Sbjct: 316 actgcgggtggaactcgacga 336
>gb|CW089259.1|CW089259 104_434_10948601_114_32582_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948601, DNA
sequence
Length = 668
Score = 69.9 bits (35), Expect = 2e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 153 aggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcgacg 211
||||||| ||||||| |||||| || | ||||||||||||||||||||||||||||||
Sbjct: 344 aggtgcttgcacacagggccaccggaggtttcctgacgcactgcgggtggaactcgacg 402
>gb|CW409172.1|CW409172 fsbb001f103f24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f103f24, DNA
sequence
Length = 675
Score = 69.9 bits (35), Expect = 2e-010
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 153 aggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcgacg 211
||||||| ||||||| |||||| || | ||||||||||||||||||||||||||||||
Sbjct: 369 aggtgcttgcacacagggccaccggaggtttcctgacgcactgcgggtggaactcgacg 311
>gb|CW463308.1|CW463308 fsbb001f211n13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f211n13, DNA
sequence
Length = 733
Score = 69.9 bits (35), Expect = 2e-010
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 153 aggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcgacg 211
||||||| ||||||| |||||| || | ||||||||||||||||||||||||||||||
Sbjct: 520 aggtgcttgcacacagggccaccggaggtttcctgacgcactgcgggtggaactcgacg 462
>gb|CD224703.1|CD224703 CCC1_35_F08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_35_F08_A007 5', mRNA sequence
Length = 620
Score = 69.9 bits (35), Expect = 2e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctg 64
||||| |||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 570 gagctgggcaacgggctgtgcgactccggcaagcctttcgtctgggtgctg 620
>gb|CX607334.1|CX607334 ANR1_8_A10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_8_A10_A002 3', mRNA sequence
Length = 637
Score = 69.9 bits (35), Expect = 2e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 153 aggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcgacg 211
||||||| ||||||| |||||| || | ||||||||||||||||||||||||||||||
Sbjct: 117 aggtgcttgcacacagggccaccggaggtttcctgacgcactgcgggtggaactcgacg 175
>gb|CX608331.1|CX608331 ANR1_38_B01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_B01_A002 3', mRNA sequence
Length = 698
Score = 69.9 bits (35), Expect = 2e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 153 aggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcgacg 211
||||||| ||||||| |||||| || | ||||||||||||||||||||||||||||||
Sbjct: 106 aggtgcttgcacacagggccaccggaggtttcctgacgcactgcgggtggaactcgacg 164
>gb|CX608499.1|CX608499 ANR1_39_A08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_39_A08_A002 3', mRNA sequence
Length = 642
Score = 69.9 bits (35), Expect = 2e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 153 aggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcgacg 211
||||||| ||||||| |||||| || | ||||||||||||||||||||||||||||||
Sbjct: 49 aggtgcttgcacacagggccaccggaggtttcctgacgcactgcgggtggaactcgacg 107
>gb|CX623017.1|CX623017 GABR1_67_F09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_67_F09_A002 3', mRNA sequence
Length = 700
Score = 69.9 bits (35), Expect = 2e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 153 aggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcgacg 211
||||||| ||||||| |||||| || | ||||||||||||||||||||||||||||||
Sbjct: 115 aggtgcttgcacacagggccaccggaggtttcctgacgcactgcgggtggaactcgacg 173
>gb|CX623201.1|CX623201 GABR1_68_G03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_G03_A002 3', mRNA sequence
Length = 713
Score = 69.9 bits (35), Expect = 2e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 153 aggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcgacg 211
||||||| ||||||| |||||| || | ||||||||||||||||||||||||||||||
Sbjct: 120 aggtgcttgcacacagggccaccggaggtttcctgacgcactgcgggtggaactcgacg 178
>gb|CW395484.1|CW395484 fsbb001f083i14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f083i14, DNA
sequence
Length = 691
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 167 aaggccacaggttgcttcctgacgcactgcgggtggaactcgacga 212
||||||||||| |||||| | |||||||||||||||||||||||||
Sbjct: 185 aaggccacaggctgcttcatcacgcactgcgggtggaactcgacga 140
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 acgagctcggcaacggactgtgcgattccggca 44
|||||||||||| ||| ||||||||||||||||
Sbjct: 341 acgagctcggcagcgggctgtgcgattccggca 309
Score = 48.1 bits (24), Expect = 0.001
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 259 ggcggaccagccgacgacggccaaatatgtggagagcgcgtgggggat 306
|||||||||||| ||| |||| || || ||||||||||||||| ||||
Sbjct: 93 ggcggaccagccaacggcggcgaagtacgtggagagcgcgtggaggat 46
>gb|CL189680.1|CL189680 104_407_10905541_116_32481_061 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905541, DNA
sequence
Length = 677
Score = 61.9 bits (31), Expect = 6e-008
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacgat 213
|||||| ||||||||||||||||||||||||||||
Sbjct: 164 tgcttcgtgacgcactgcgggtggaactcgacgat 130
Score = 44.1 bits (22), Expect = 0.014
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccag 268
|||||||||||||| |||||| ||||||||
Sbjct: 97 atggtggcgatgccgcagtggtcggaccag 68
>gb|CW500380.1|CW500380 fsbb001f295k23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f295k23, DNA
sequence
Length = 503
Score = 61.9 bits (31), Expect = 6e-008
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacgat 213
|||||| ||||||||||||||||||||||||||||
Sbjct: 308 tgcttcgtgacgcactgcgggtggaactcgacgat 274
Score = 44.1 bits (22), Expect = 0.014
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccag 268
|||||||||||||| |||||| ||||||||
Sbjct: 241 atggtggcgatgccgcagtggtcggaccag 212
>gb|CN127822.1|CN127822 RHOH1_25_F09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_25_F09_A002 3', mRNA sequence
Length = 681
Score = 61.9 bits (31), Expect = 6e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 153 aggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaactcgacg 211
||||||| ||||||| |||||| || | |||| |||||||||||||||||||||||||
Sbjct: 128 aggtgcttgcacacagggccaccggaggtttcccgacgcactgcgggtggaactcgacg 186
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
Length = 142376
Score = 61.9 bits (31), Expect = 6e-008
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacgat 213
|||||||||||||||||||| ||||||||||||||
Sbjct: 123437 tgcttcctgacgcactgcggctggaactcgacgat 123471
Score = 56.0 bits (28), Expect = 4e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgac 210
|||||| |||||||||||||||||||||||||
Sbjct: 128073 tgcttcgtgacgcactgcgggtggaactcgac 128104
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacgat 213
|||||| || |||||||||||||||||||||||||
Sbjct: 120505 tgcttcgtgtcgcactgcgggtggaactcgacgat 120539
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgac 210
|||||| || ||||||||||||||||||||||
Sbjct: 114125 tgcttcgtgtcgcactgcgggtggaactcgac 114156
Score = 40.1 bits (20), Expect = 0.22
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 178 ttgcttcctgacgcactgcgggtggaactcgacgat 213
||||||| |||| ||||| ||||||||||| |||||
Sbjct: 133278 ttgcttcatgacacactgtgggtggaactcaacgat 133313
>gb|CW089260.1|CW089260 104_434_10948601_115_32586_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948601, DNA
sequence
Length = 697
Score = 60.0 bits (30), Expect = 2e-007
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||||||
Sbjct: 662 ttcctgacgcactgcgggtggaactcgacg 633
>gb|CL175246.1|CL175246 104_380_10892299_116_31767_283 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892299, DNA
sequence
Length = 272
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
||||||||||||||| |||||||||||||||||
Sbjct: 50 tgcttcctgacgcacagcgggtggaactcgacg 82
>gb|CW058606.1|CW058606 104_301_10518833_115_30164 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518833, DNA
sequence
Length = 416
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 268 tgcttcgtgacgcactgcgggtggaactcgacg 300
>gb|CW107875.1|CW107875 104_478_11096833_116_34485_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096833, DNA
sequence
Length = 573
Score = 58.0 bits (29), Expect = 9e-007
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||||||||||||||||||||||||||
Sbjct: 475 tgcttcctgacgcactgcgggtggaactc 503
>gb|CW222899.1|CW222899 104_658_11202620_116_37184_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202620, DNA
sequence
Length = 676
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
||||||||||||||| |||||||||||||||||
Sbjct: 406 tgcttcctgacgcacagcgggtggaactcgacg 374
>gb|CW283440.1|CW283440 104_759_11409248_148_35476_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11409248, DNA
sequence
Length = 436
Score = 58.0 bits (29), Expect = 9e-007
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||||||||||||||||||||||||||
Sbjct: 323 tgcttcctgacgcactgcgggtggaactc 295
>gb|CW387248.1|CW387248 fsbb001f071i06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f071i06, DNA
sequence
Length = 237
Score = 58.0 bits (29), Expect = 9e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||| |||||||||||| ||| |||||||||||||||| ||| ||| | ||||| |||
Sbjct: 123 agctgtacgagctcggcagcgggctgtgcgattccggcaggcccttcatctgggtcgtga 64
Query: 66 ggtcc 70
|||||
Sbjct: 63 ggtcc 59
>gb|CW392765.1|CW392765 fsbb001f079i12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f079i12, DNA
sequence
Length = 534
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 433 tgcttcgtgacgcactgcgggtggaactcgacg 401
>gb|CW395483.1|CW395483 fsbb001f083i14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f083i14, DNA
sequence
Length = 639
Score = 58.0 bits (29), Expect = 9e-007
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 12 acgagctcggcaacggactgtgcgattccggcaagcc 48
|||||||||||| ||| ||||||||||||||||||||
Sbjct: 586 acgagctcggcagcgggctgtgcgattccggcaagcc 622
>gb|CW424419.1|CW424419 fsbb001f134l24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f134l24, DNA
sequence
Length = 579
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 523 tgcttcgtgacgcactgcgggtggaactcgacg 491
>gb|CW432748.1|CW432748 fsbb001f147k02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f147k02, DNA
sequence
Length = 738
Score = 58.0 bits (29), Expect = 9e-007
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 416 tggatgcacaaggccaaggaggccatgcaggaaggaggaagctctgacaagaa 468
|||||||| ||||||||||| ||||||||| | ||||| ||||| ||||||||
Sbjct: 138 tggatgcaaaaggccaaggaagccatgcagaatggagggagctcggacaagaa 86
Score = 42.1 bits (21), Expect = 0.056
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 229 tggtgttccaatggtggcgatgccccagtgggcggaccagccgac 273
|||||| ||||||||||| || || || ||||| |||||||||||
Sbjct: 334 tggtgtgccaatggtggcaataccacactgggcagaccagccgac 290
>gb|BE126076.1|BE126076 DG1_65_E03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 680
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 220 tgcttcgtgacgcactgcgggtggaactcgacg 252
>gb|BE355481.1|BE355481 DG1_114_G09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 388
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 129 tgcttcgtgacgcactgcgggtggaactcgacg 161
>gb|BE358427.1|BE358427 DG1_29_F10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 509
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 229 tgcttcgtgacgcactgcgggtggaactcgacg 261
>gb|BE362888.2|BE362888 DG1_90_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 682
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 324 tgcttcgtgacgcactgcgggtggaactcgacg 356
>gb|CB927938.1|CB927938 ABA1_35_B08.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_35_B08_A012 3', mRNA sequence
Length = 629
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
||||||||||||||| |||||||||||||||||
Sbjct: 259 tgcttcctgacgcacagcgggtggaactcgacg 291
>gb|CB928778.1|CB928778 ABA1_24_C06.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_24_C06_A012 3', mRNA sequence
Length = 513
Score = 58.0 bits (29), Expect = 9e-007
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 416 tggatgcacaaggccaaggaggccatgcaggaaggaggaagctctgacaagaa 468
|||||||| ||||||||||| ||||||||| | ||||| ||||| ||||||||
Sbjct: 234 tggatgcaaaaggccaaggaagccatgcagaatggagggagctcggacaagaa 286
Score = 42.1 bits (21), Expect = 0.056
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 229 tggtgttccaatggtggcgatgccccagtgggcggaccagccgac 273
|||||| ||||||||||| || || || ||||| |||||||||||
Sbjct: 38 tggtgtgccaatggtggcaataccacactgggcagaccagccgac 82
>gb|CD424348.1|CD424348 SA1_5_E09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_5_E09_A002 3', mRNA sequence
Length = 606
Score = 58.0 bits (29), Expect = 9e-007
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 416 tggatgcacaaggccaaggaggccatgcaggaaggaggaagctctgacaagaa 468
|||||||| ||||||||||| ||||||||| | ||||| ||||| ||||||||
Sbjct: 377 tggatgcaaaaggccaaggaagccatgcagaatggagggagctcggacaagaa 429
Score = 56.0 bits (28), Expect = 4e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 146 cagctcgaggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaac 205
|||||||| || || ||||| || ||||||||||| ||| | || || ||||| ||||||
Sbjct: 98 cagctcgaagttctagcacataaagccacaggttgtttcttcacacattgcggatggaac 157
Query: 206 tcgacgattgaatccatcgctagtggtgttccaatggtggcgatgccccagtgggcggac 265
|||||| | ||| | | | || |||||| ||||||||||| || || || ||||| |||
Sbjct: 158 tcgacgctggaagcagtagttaatggtgtgccaatggtggcaataccacactgggcagac 217
Query: 266 cagccgac 273
||||||||
Sbjct: 218 cagccgac 225
>gb|CN130398.1|CN130398 RHOH1_41_F02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_41_F02_A002 3', mRNA sequence
Length = 712
Score = 58.0 bits (29), Expect = 9e-007
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||||||||||||||||||||||||||
Sbjct: 234 tgcttcctgacgcactgcgggtggaactc 262
>gb|CN133765.1|CN133765 OX1_18_E06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_18_E06_A002 3', mRNA sequence
Length = 574
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
||||||||||||||| |||||||||||||||||
Sbjct: 126 tgcttcctgacgcacagcgggtggaactcgacg 158
>gb|CN141229.1|CN141229 OX1_50_D06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_50_D06_A002 3', mRNA sequence
Length = 758
Score = 58.0 bits (29), Expect = 9e-007
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||||||||||||||||||||||||||
Sbjct: 294 tgcttcctgacgcactgcgggtggaactc 322
>gb|CN148075.1|CN148075 WOUND1_54_C02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_54_C02_A002 3', mRNA sequence
Length = 746
Score = 58.0 bits (29), Expect = 9e-007
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 416 tggatgcacaaggccaaggaggccatgcaggaaggaggaagctctgacaagaa 468
|||||||| ||||||||||| ||||||||| | ||||| ||||| ||||||||
Sbjct: 499 tggatgcaaaaggccaaggaagccatgcagaatggagggagctcggacaagaa 551
Score = 56.0 bits (28), Expect = 4e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 146 cagctcgaggtgctggcacacaaggccacaggttgcttcctgacgcactgcgggtggaac 205
|||||||| || || ||||| || ||||||||||| ||| | || || ||||| ||||||
Sbjct: 220 cagctcgaagttctagcacataaagccacaggttgtttcttcacacattgcggatggaac 279
Query: 206 tcgacgattgaatccatcgctagtggtgttccaatggtggcgatgccccagtgggcggac 265
|||||| | ||| | | | || |||||| ||||||||||| || || || ||||| |||
Sbjct: 280 tcgacgctggaagcagtagttaatggtgtgccaatggtggcaataccacattgggcagac 339
Query: 266 cagccgac 273
||||||||
Sbjct: 340 cagccgac 347
>gb|CX616980.1|CX616980 GABR1_31_B05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_31_B05_A002 3', mRNA sequence
Length = 636
Score = 58.0 bits (29), Expect = 9e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 280 tgcttcgtgacgcactgcgggtggaactcgacg 312
>gb|CW115454.1|CW115454 104_490_11106569_116_34592_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11106569, DNA
sequence
Length = 603
Score = 56.0 bits (28), Expect = 4e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgac 210
|||||| |||||||||||||||||||||||||
Sbjct: 200 tgcttcgtgacgcactgcgggtggaactcgac 231
>gb|CW130771.1|CW130771 104_513_11115302_116_34783_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115302, DNA
sequence
Length = 634
Score = 56.0 bits (28), Expect = 4e-006
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcga 209
||||||||||||||||||||||||||||
Sbjct: 452 ttcctgacgcactgcgggtggaactcga 425
>gb|CW180651.1|CW180651 104_595_11163067_116_36641_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163067, DNA
sequence
Length = 595
Score = 56.0 bits (28), Expect = 4e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgac 210
|||||| |||||||||||||||||||||||||
Sbjct: 519 tgcttcgtgacgcactgcgggtggaactcgac 488
>gb|CW223631.1|CW223631 104_659_11203019_116_37185_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203019, DNA
sequence
Length = 637
Score = 56.0 bits (28), Expect = 4e-006
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcga 209
||||||||||||||||||||||||||||
Sbjct: 507 ttcctgacgcactgcgggtggaactcga 534
>gb|CW223632.1|CW223632 104_659_11203019_148_37186_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203019, DNA
sequence
Length = 695
Score = 56.0 bits (28), Expect = 4e-006
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcga 209
||||||||||||||||||||||||||||
Sbjct: 623 ttcctgacgcactgcgggtggaactcga 596
>gb|CW262205.1|CW262205 104_729_11229928_116_35210_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229928, DNA
sequence
Length = 458
Score = 56.0 bits (28), Expect = 4e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgac 210
|||||| |||||||||||||||||||||||||
Sbjct: 32 tgcttcgtgacgcactgcgggtggaactcgac 1
>gb|CF489797.1|CF489797 POL1_59_E03.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_E03_A002 5', mRNA sequence
Length = 770
Score = 56.0 bits (28), Expect = 4e-006
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcga 209
||||||||||||||||||||||||||||
Sbjct: 623 ttcctgacgcactgcgggtggaactcga 650
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 149,243
Number of Sequences: 832831
Number of extensions: 149243
Number of successful extensions: 43055
Number of sequences better than 0.5: 271
Number of HSP's better than 0.5 without gapping: 270
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 42600
Number of HSP's gapped (non-prelim): 449
length of query: 581
length of database: 491,359,669
effective HSP length: 19
effective length of query: 562
effective length of database: 475,535,880
effective search space: 267251164560
effective search space used: 267251164560
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)