BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2850725.2.1
(847 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN128392.1|CN128392 RHOH1_29_F01.b1_A002 Acid- and alkal... 666 0.0
gb|CN125777.1|CN125777 RHOH1_13_F02.b1_A002 Acid- and alkal... 652 0.0
gb|CN126096.1|CN126096 RHOH1_15_D05.b1_A002 Acid- and alkal... 593 e-167
gb|CX612392.1|CX612392 GABR1_2_E06.b1_A002 GA- or brassinol... 593 e-167
gb|BE360281.1|BE360281 DG1_62_H05.g1_A002 Dark Grown 1 (DG1... 587 e-166
gb|BE360328.1|BE360328 DG1_62_C05.g1_A002 Dark Grown 1 (DG1... 585 e-165
gb|CN130357.1|CN130357 RHOH1_41_A06.b1_A002 Acid- and alkal... 585 e-165
gb|CN130866.1|CN130866 RHOH1_44_G11.b1_A002 Acid- and alkal... 585 e-165
gb|BE360911.1|BE360911 DG1_67_E10.g1_A002 Dark Grown 1 (DG1... 581 e-164
gb|CN133109.1|CN133109 OX1_10_E07.b1_A002 Oxidatively-stres... 561 e-158
gb|CN130869.1|CN130869 RHOH1_44_H03.b1_A002 Acid- and alkal... 531 e-149
gb|CF430073.1|CF430073 PH1_26_C12.b1_A002 Phosphorous-defic... 527 e-148
gb|CX618561.1|CX618561 GABR1_40_G11.b1_A002 GA- or brassino... 519 e-145
gb|CF433159.1|CF433159 NIT1_25_D06.b1_A002 Nitrogen-deficie... 474 e-132
gb|CF433636.1|CF433636 NIT1_28_B10.b1_A002 Nitrogen-deficie... 466 e-129
gb|BZ330010.1|BZ330010 hv89d05.g1 WGS-SbicolorF (JM107 adap... 452 e-125
gb|BZ332786.1|BZ332786 hx30f05.g1 WGS-SbicolorF (JM107 adap... 452 e-125
gb|CW398811.1|CW398811 fsbb001f088g17f0 Sorghum methylation... 452 e-125
gb|CW053876.1|CW053876 104_294_10516221_115_30183 Sorghum m... 420 e-116
gb|CF432631.1|CF432631 NIT1_18_A05.b1_A002 Nitrogen-deficie... 398 e-109
gb|CX616830.1|CX616830 GABR1_30_E05.b1_A002 GA- or brassino... 369 e-100
gb|CX608685.1|CX608685 ANR1_40_D04.b1_A002 Anaerobic roots ... 339 3e-091
gb|AW922979.1|AW922979 DG1_47_A02.g1_A002 Dark Grown 1 (DG1... 331 6e-089
gb|AW922668.1|AW922668 DG1_45_B09.b1_A002 Dark Grown 1 (DG1... 299 2e-079
gb|BZ780885.1|BZ780885 ii21d08.g1 WGS-SbicolorF (DH5a methy... 220 2e-055
gb|CL187536.1|CL187536 104_403_10900957_116_32463_059 Sorgh... 220 2e-055
gb|CN128469.1|CN128469 RHOH1_29_F01.g1_A002 Acid- and alkal... 210 2e-052
gb|CN130430.1|CN130430 RHOH1_41_A06.g1_A002 Acid- and alkal... 200 1e-049
gb|CF428474.1|CF428474 PH1_15_E11.b1_A002 Phosphorous-defic... 192 4e-047
gb|CL167819.1|CL167819 104_365_10810356_114_31804_036 Sorgh... 190 1e-046
gb|CL167820.1|CL167820 104_365_10810356_116_31805_036 Sorgh... 190 1e-046
gb|CW152445.1|CW152445 104_553_11144495_116_36326_086 Sorgh... 190 1e-046
gb|CN130935.1|CN130935 RHOH1_44_G11.g1_A002 Acid- and alkal... 178 5e-043
gb|BZ332785.1|BZ332785 hx30f05.b1 WGS-SbicolorF (JM107 adap... 176 2e-042
gb|AW922732.1|AW922732 DG1_45_B09.g1_A002 Dark Grown 1 (DG1... 167 2e-039
gb|CW398812.1|CW398812 fsbb001f088g17k0 Sorghum methylation... 155 8e-036
gb|CW152446.1|CW152446 104_553_11144495_148_36329_086 Sorgh... 147 2e-033
gb|BE362899.2|BE362899 DG1_90_D10.g1_A002 Dark Grown 1 (DG1... 103 3e-020
gb|CF428485.1|CF428485 PH1_15_E11.g1_A002 Phosphorous-defic... 100 4e-019
gb|BE361040.1|BE361040 DG1_69_C10.b1_A002 Dark Grown 1 (DG1... 98 2e-018
gb|AW676693.1|AW676693 DG1_13_G09.g1_A002 Dark Grown 1 (DG1... 96 6e-018
gb|AW923129.1|AW923129 DG1_49_C12.g1_A002 Dark Grown 1 (DG1... 96 6e-018
gb|BE126083.1|BE126083 DG1_65_H08.g1_A002 Dark Grown 1 (DG1... 96 6e-018
gb|BE355160.1|BE355160 DG1_10_E09.g1_A002 Dark Grown 1 (DG1... 96 6e-018
gb|BE355636.1|BE355636 DG1_115_C05.g1_A002 Dark Grown 1 (DG... 96 6e-018
gb|BE356126.1|BE356126 DG1_122_H01.g1_A002 Dark Grown 1 (DG... 96 6e-018
gb|BE356245.1|BE356245 DG1_123_B01.g1_A002 Dark Grown 1 (DG... 96 6e-018
gb|BE356626.1|BE356626 DG1_126_E08.g1_A002 Dark Grown 1 (DG... 96 6e-018
gb|BE356953.1|BE356953 DG1_145_G07.g1_A002 Dark Grown 1 (DG... 96 6e-018
gb|BE357192.1|BE357192 DG1_147_C11.g1_A002 Dark Grown 1 (DG... 96 6e-018
gb|BE357804.1|BE357804 DG1_22_B11.g1_A002 Dark Grown 1 (DG1... 96 6e-018
gb|BE359780.1|BE359780 DG1_57_A01.g2_A002 Dark Grown 1 (DG1... 96 6e-018
gb|BE360960.1|BE360960 DG1_68_B10.g1_A002 Dark Grown 1 (DG1... 96 6e-018
gb|BE361412.1|BE361412 DG1_71_A02.g1_A002 Dark Grown 1 (DG1... 96 6e-018
gb|BE362035.1|BE362035 DG1_83_D07.g1_A002 Dark Grown 1 (DG1... 96 6e-018
gb|BE363142.1|BE363142 DG1_9_D06.g1_A002 Dark Grown 1 (DG1)... 96 6e-018
gb|BE362905.2|BE362905 DG1_90_G10.g1_A002 Dark Grown 1 (DG1... 96 6e-018
gb|AW285550.2|AW285550 LG1_245_A12.g1_A002 Light Grown 1 (L... 96 6e-018
gb|AW285553.2|AW285553 LG1_245_B12.g1_A002 Light Grown 1 (L... 96 6e-018
gb|AW285562.2|AW285562 LG1_245_C12.g1_A002 Light Grown 1 (L... 96 6e-018
gb|BQ656120.1|BQ656120 pRC1113 Sorghum halepense rhizome cD... 96 6e-018
gb|CB928779.1|CB928779 ABA1_24_G07.b1_A012 Abscisic acid-tr... 96 6e-018
gb|CD230380.1|CD230380 SS1_43_G05.b1_A012 Salt-stressed see... 96 6e-018
gb|CD230932.1|CD230932 SS1_7_H07.b1_A012 Salt-stressed seed... 96 6e-018
gb|CD231418.1|CD231418 SS1_16_B12.b1_A012 Salt-stressed see... 96 6e-018
gb|CD231429.1|CD231429 SS1_16_A12.b1_A012 Salt-stressed see... 96 6e-018
gb|CD233135.1|CD233135 SS1_12_H02.b1_A012 Salt-stressed see... 96 6e-018
gb|CD235247.1|CD235247 SS1_28_C11.b1_A012 Salt-stressed see... 96 6e-018
gb|CD428865.1|CD428865 ETH1_1_F11.b1_A002 Ethylene-treated ... 96 6e-018
gb|CF431556.1|CF431556 NIT1_8_B09.b1_A002 Nitrogen-deficien... 96 6e-018
gb|CN152433.1|CN152433 WOUND1_82_B08.b1_A002 Wounded leaves... 96 6e-018
gb|CX607684.1|CX607684 ANR1_30_D07.b1_A002 Anaerobic roots ... 96 6e-018
gb|DN552618.1|DN552618 pSHR-RT-A-H2_B03_C378 pSHR Sorghum h... 96 6e-018
gb|DN552620.1|DN552620 pSHR-RT-A-H2_H06_C378 pSHR Sorghum h... 96 6e-018
gb|CN125431.1|CN125431 RHOH1_11_B11.b1_A002 Acid- and alkal... 92 1e-016
gb|CN125511.1|CN125511 RHOH1_11_B11.g1_A002 Acid- and alkal... 92 1e-016
gb|CX613646.1|CX613646 GABR1_9_H08.b1_A002 GA- or brassinol... 92 1e-016
gb|CX620021.1|CX620021 GABR1_49_H06.b1_A002 GA- or brassino... 92 1e-016
gb|AI724144.1|AI724144 RHIZ1_7_D05.y2_A001 Rhizome1 (RHIZ1)... 88 2e-015
gb|BF655766.1|BF655766 FM1_48_H07.b1_A003 Floral-Induced Me... 88 2e-015
gb|BG052517.1|BG052517 RHIZ2_26_B07.g1_A003 Rhizome2 (RHIZ2... 88 2e-015
gb|BG101917.1|BG101917 RHIZ2_21_D11.g1_A003 Rhizome2 (RHIZ2... 88 2e-015
gb|BG102063.1|BG102063 RHIZ2_24_D05.g1_A003 Rhizome2 (RHIZ2... 88 2e-015
gb|BG102577.1|BG102577 RHIZ2_34_G04.g1_A003 Rhizome2 (RHIZ2... 88 2e-015
gb|BG102635.1|BG102635 RHIZ2_35_D09.g1_A003 Rhizome2 (RHIZ2... 88 2e-015
gb|BG103221.1|BG103221 RHIZ2_19_F10.g1_A003 Rhizome2 (RHIZ2... 88 2e-015
gb|BG103544.1|BG103544 RHIZ2_37_G11.g1_A003 Rhizome2 (RHIZ2... 88 2e-015
gb|BG158617.1|BG158617 RHIZ2_42_G10.g1_A003 Rhizome2 (RHIZ2... 88 2e-015
gb|DN551708.1|DN551708 pSPR-L_F12_C225 pSPR Sorghum propinq... 88 2e-015
gb|DN552619.1|DN552619 pSHR-RT-A-H2_C11_C378 pSHR Sorghum h... 88 2e-015
gb|CW204838.1|CW204838 104_633_11186761_116_36929_015 Sorgh... 86 6e-015
gb|CD234054.1|CD234054 SS1_6_A12.b1_A012 Salt-stressed seed... 86 6e-015
gb|CN130939.1|CN130939 RHOH1_44_H03.g1_A002 Acid- and alkal... 86 6e-015
gb|CN132806.1|CN132806 OX1_8_G11.b1_A002 Oxidatively-stress... 82 1e-013
gb|BI643593.1|BI643593 DG1_90_D10.b1_A002 Dark Grown 1 (DG1... 80 4e-013
gb|BF586801.1|BF586801 FM1_30_E04.g1_A003 Floral-Induced Me... 74 2e-011
gb|CN125855.1|CN125855 RHOH1_13_F02.g1_A002 Acid- and alkal... 72 9e-011
gb|CW239927.1|CW239927 104_698_11217926_116_37423_057 Sorgh... 66 6e-009
gb|BE359762.1|BE359762 DG1_56_B06.g2_A002 Dark Grown 1 (DG1... 66 6e-009
gb|BG559665.1|BG559665 RHIZ2_72_B05.g1_A003 Rhizome2 (RHIZ2... 66 6e-009
gb|CW212581.1|CW212581 104_643_11191097_148_37023_067 Sorgh... 60 3e-007
gb|CW377486.1|CW377486 fsbb001f055n05f0 Sorghum methylation... 60 3e-007
gb|CW377487.1|CW377487 fsbb001f055n05k0 Sorghum methylation... 60 3e-007
gb|AW282766.1|AW282766 LG1_290_G03.g1_A002 Light Grown 1 (L... 60 3e-007
gb|AW565574.1|AW565574 LG1_346_B12.g1_A002 Light Grown 1 (L... 60 3e-007
gb|AW922407.1|AW922407 DG1_18_E04.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|AW922506.1|AW922506 DG1_20_E08.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|AW922531.1|AW922531 DG1_20_F02.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|AW922572.1|AW922572 DG1_45_F12.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|AW922972.1|AW922972 DG1_47_G05.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|AW923023.1|AW923023 DG1_48_A04.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|AW923705.1|AW923705 DG1_58_A12.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE352954.1|BE352954 DG1_1_G01.g1_A002 Dark Grown 1 (DG1)... 60 3e-007
gb|BE355157.1|BE355157 DG1_10_C04.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE355757.1|BE355757 DG1_116_E10.g1_A002 Dark Grown 1 (DG... 60 3e-007
gb|BE355769.1|BE355769 DG1_116_D10.g1_A002 Dark Grown 1 (DG... 60 3e-007
gb|BE356522.1|BE356522 DG1_125_D12.g1_A002 Dark Grown 1 (DG... 60 3e-007
gb|BE356791.1|BE356791 DG1_12_F08.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE357651.1|BE357651 DG1_21_E12.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE358308.1|BE358308 DG1_29_A01.b1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE358390.1|BE358390 DG1_29_A01.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE358644.1|BE358644 DG1_30_G10.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE359216.1|BE359216 DG1_39_D01.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE359389.1|BE359389 DG1_40_G11.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE359591.1|BE359591 DG1_54_F11.g2_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE359959.1|BE359959 DG1_58_A12.g2_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE360321.1|BE360321 DG1_62_D01.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE360867.1|BE360867 DG1_67_A03.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE361275.1|BE361275 DG1_70_A05.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE362019.1|BE362019 DG1_83_F08.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE362680.1|BE362680 DG1_88_H11.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE362709.1|BE362709 DG1_88_E12.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|BE363110.1|BE363110 DG1_9_A08.g1_A002 Dark Grown 1 (DG1)... 60 3e-007
gb|BG557574.1|BG557574 EM1_53_C11.g1_A002 Embryo 1 (EM1) So... 60 3e-007
gb|BG557658.1|BG557658 EM1_54_H03.g1_A002 Embryo 1 (EM1) So... 60 3e-007
gb|BE362973.2|BE362973 DG1_92_B12.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|CN124201.1|CN124201 RHOH1_3_F04.b1_A002 Acid- and alkali... 60 3e-007
gb|CN124987.1|CN124987 RHOH1_8_E04.b1_A002 Acid- and alkali... 60 3e-007
gb|CN126439.1|CN126439 RHOH1_17_D11.b1_A002 Acid- and alkal... 60 3e-007
gb|CN127083.1|CN127083 RHOH1_21_A07.b1_A002 Acid- and alkal... 60 3e-007
gb|CN127944.1|CN127944 RHOH1_26_C04.b1_A002 Acid- and alkal... 60 3e-007
gb|CN129069.1|CN129069 RHOH1_33_G07.b3_A002 Acid- and alkal... 60 3e-007
gb|CN136199.1|CN136199 OX1_41_H09.b1_A002 Oxidatively-stres... 60 3e-007
gb|CN138524.1|CN138524 OX1_64_G03.b1_A002 Oxidatively-stres... 60 3e-007
gb|CN138685.1|CN138685 OX1_13_G03.b1_A002 Oxidatively-stres... 60 3e-007
gb|CN144235.1|CN144235 WOUND1_21_A11.b1_A002 Wounded leaves... 60 3e-007
gb|CN144425.1|CN144425 WOUND1_22_D10.b1_A002 Wounded leaves... 60 3e-007
gb|CN147005.1|CN147005 WOUND1_46_F09.b1_A002 Wounded leaves... 60 3e-007
gb|CN150903.1|CN150903 WOUND1_72_E04.b1_A002 Wounded leaves... 60 3e-007
gb|CX606435.1|CX606435 ANR1_3_B07.b1_A002 Anaerobic roots S... 60 3e-007
gb|CX606986.1|CX606986 ANR1_6_B12.b1_A002 Anaerobic roots S... 60 3e-007
gb|CX607340.1|CX607340 ANR1_8_B07.b1_A002 Anaerobic roots S... 60 3e-007
gb|CX607514.1|CX607514 ANR1_29_D11.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX607525.1|CX607525 ANR1_29_E11.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX607663.1|CX607663 ANR1_30_B08.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX607713.1|CX607713 ANR1_30_G03.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX607994.1|CX607994 ANR1_32_B03.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX608356.1|CX608356 ANR1_38_D04.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX608669.1|CX608669 ANR1_40_B08.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX608674.1|CX608674 ANR1_40_C02.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX610059.1|CX610059 ANR1_16_H06.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX610383.1|CX610383 ANR1_18_H03.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX610981.1|CX610981 ANR1_22_A10.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX611330.1|CX611330 ANR1_24_B10.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX611346.1|CX611346 ANR1_24_D05.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX611660.1|CX611660 ANR1_26_A08.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX611823.1|CX611823 ANR1_27_A01.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX611858.1|CX611858 ANR1_27_D04.b1_A002 Anaerobic roots ... 60 3e-007
gb|CX613258.1|CX613258 GABR1_7_D12.b1_A002 GA- or brassinol... 60 3e-007
gb|CX613463.1|CX613463 GABR1_8_G06.b1_A002 GA- or brassinol... 60 3e-007
gb|CX615243.1|CX615243 GABR1_19_B01.b1_A002 GA- or brassino... 60 3e-007
gb|CX616634.1|CX616634 GABR1_29_C02.b1_A002 GA- or brassino... 60 3e-007
gb|CX617377.1|CX617377 GABR1_33_H12.b1_A002 GA- or brassino... 60 3e-007
gb|CX618729.1|CX618729 GABR1_41_G08.b1_A002 GA- or brassino... 60 3e-007
gb|CX619553.1|CX619553 GABR1_46_E07.b1_A002 GA- or brassino... 60 3e-007
gb|CX620952.1|CX620952 GABR1_55_C05.b1_A002 GA- or brassino... 60 3e-007
gb|CX622796.1|CX622796 GABR1_66_B08.b1_A002 GA- or brassino... 60 3e-007
gb|CX622847.1|CX622847 GABR1_66_G08.b1_A002 GA- or brassino... 60 3e-007
gb|BI643577.1|BI643577 DG1_91_D09.g1_A002 Dark Grown 1 (DG1... 54 2e-005
gb|CN127302.1|CN127302 RHOH1_22_E09.b1_A002 Acid- and alkal... 54 2e-005
gb|CX607351.1|CX607351 ANR1_8_C10.b1_A002 Anaerobic roots S... 52 9e-005
gb|CX608769.1|CX608769 ANR1_40_D04.g1_A002 Anaerobic roots ... 52 9e-005
gb|CX609481.1|CX609481 ANR1_13_A08.b1_A002 Anaerobic roots ... 52 9e-005
gb|CX618649.1|CX618649 GABR1_40_G11.g1_A002 GA- or brassino... 52 9e-005
gb|BE125727.1|BE125727 DG1_54_F11.g1_A002 Dark Grown 1 (DG1... 50 3e-004
gb|CX608199.1|CX608199 ANR1_37_F05.b1_A002 Anaerobic roots ... 50 3e-004
gb|CX613737.1|CX613737 GABR1_9_H08.g1_A002 GA- or brassinol... 50 3e-004
gb|CX615695.1|CX615695 GABR1_22_C02.b1_A002 GA- or brassino... 50 3e-004
gb|BF587578.1|BF587578 FM1_38_B06.g1_A003 Floral-Induced Me... 48 0.001
gb|CN133189.1|CN133189 OX1_10_E07.g1_A002 Oxidatively-stres... 48 0.001
gb|CX612484.1|CX612484 GABR1_2_E06.g1_A002 GA- or brassinol... 48 0.001
gb|AW923651.1|AW923651 DG1_57_A01.g1_A002 Dark Grown 1 (DG1... 46 0.005
gb|CN126179.1|CN126179 RHOH1_15_D05.g1_A002 Acid- and alkal... 46 0.005
gb|BG102151.1|BG102151 RHIZ2_21_D11.b1_A003 Rhizome2 (RHIZ2... 44 0.021
gb|CN145659.1|CN145659 WOUND1_34_A02.g1_A002 Wounded leaves... 42 0.082
gb|CN152509.1|CN152509 WOUND1_82_B08.g1_A002 Wounded leaves... 42 0.082
gb|CW022256.1|CW022256 104_161_10431735_1_30006 Sorghum met... 40 0.32
gb|AI724109.1|AI724109 RHIZ1_6_C09.y2_A001 Rhizome1 (RHIZ1)... 40 0.32
gb|AI724332.1|AI724332 RHIZ1_34_F04.y1_A001 Rhizome1 (RHIZ1... 40 0.32
gb|AI724405.1|AI724405 RHIZ1_36_C09.y2_A001 Rhizome1 (RHIZ1... 40 0.32
gb|AI724755.1|AI724755 RHIZ1_26_F12.y2_A001 Rhizome1 (RHIZ1... 40 0.32
gb|AI724761.1|AI724761 RHIZ1_26_G11.y2_A001 Rhizome1 (RHIZ1... 40 0.32
gb|AW284272.1|AW284272 LG1_268_H08.g1_A002 Light Grown 1 (L... 40 0.32
gb|AW923646.1|AW923646 DG1_56_B06.g1_A002 Dark Grown 1 (DG1... 40 0.32
gb|BE356039.1|BE356039 DG1_121_F09.g1_A002 Dark Grown 1 (DG... 40 0.32
gb|BE362600.1|BE362600 DG1_87_B05.g1_A002 Dark Grown 1 (DG1... 40 0.32
gb|BF655509.1|BF655509 FM1_48_A12.g1_A003 Floral-Induced Me... 40 0.32
gb|BF656391.1|BF656391 FM1_45_C03.g2_A003 Floral-Induced Me... 40 0.32
gb|BG051646.1|BG051646 FM1_59_D03.g1_A003 Floral-Induced Me... 40 0.32
gb|BG052246.1|BG052246 RHIZ2_12_A05.g1_A003 Rhizome2 (RHIZ2... 40 0.32
gb|BG053559.1|BG053559 RHIZ2_10_G03.g1_A003 Rhizome2 (RHIZ2... 40 0.32
gb|BG101900.1|BG101900 RHIZ2_21_C04.g1_A003 Rhizome2 (RHIZ2... 40 0.32
gb|BG103468.1|BG103468 RHIZ2_37_A03.g1_A003 Rhizome2 (RHIZ2... 40 0.32
gb|BG158590.1|BG158590 RHIZ2_42_E03.g1_A003 Rhizome2 (RHIZ2... 40 0.32
gb|BG558524.1|BG558524 RHIZ2_56_H05.g1_A003 Rhizome2 (RHIZ2... 40 0.32
gb|BG559879.1|BG559879 RHIZ2_74_G02.g1_A003 Rhizome2 (RHIZ2... 40 0.32
gb|CB928364.1|CB928364 ABA1_15_D02.b1_A012 Abscisic acid-tr... 40 0.32
gb|CD231390.1|CD231390 SS1_16_A06.b1_A012 Salt-stressed see... 40 0.32
gb|CF073212.1|CF073212 FE1_28_G01.g1_A002 Iron-deficient se... 40 0.32
gb|CF427832.1|CF427832 PH1_11_B05.b1_A002 Phosphorous-defic... 40 0.32
gb|CN132478.1|CN132478 OX1_6_H11.b1_A002 Oxidatively-stress... 40 0.32
gb|CX620354.1|CX620354 GABR1_51_H01.b1_A002 GA- or brassino... 40 0.32
>gb|CN128392.1|CN128392 RHOH1_29_F01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_29_F01_A002 3', mRNA sequence
Length = 798
Score = 666 bits (336), Expect = 0.0
Identities = 447/484 (92%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 548 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 489
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 488 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 429
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 428 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 369
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 368 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 309
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 249
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 248 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 189
Query: 724 taacaacaccatcagccggtatcttgcgaatctcctgcggaaggtccagtactgtgatct 783
| ||||||||||||||||||||||||||||||||||| ||||| || || || |||| ||
Sbjct: 188 tgacaacaccatcagccggtatcttgcgaatctcctgtggaagatctagcacagtgacct 129
Query: 784 tgatcagtgggaaggccttggcgagggaattccctgttgtgccatccccatggtaacagc 843
||||| ||||||||||| |||||| || |||||||| ||||||||||||||||||||||
Sbjct: 128 tgatctgtgggaaggccatggcgatggccttccctgtggtgccatccccatggtaacagc 69
Query: 844 agtc 847
||||
Sbjct: 68 agtc 65
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 759 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 702
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 701 ccaagcttgtcacagct 685
>gb|CN125777.1|CN125777 RHOH1_13_F02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_13_F02_A002 3', mRNA sequence
Length = 774
Score = 652 bits (329), Expect = 0.0
Identities = 447/485 (92%), Gaps = 1/485 (0%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 547 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 488
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 487 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 428
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 427 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 368
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 367 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 308
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 248
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 247 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 188
Query: 724 taacaacaccatcagccggtatcttgcgaatctcctgcggaaggtccagtactgtgatct 783
| ||||||||||||||||||||||||||||||||||| ||||| || || || |||| ||
Sbjct: 187 tgacaacaccatcagccggtatcttgcgaatctcctgtggaagatctagcacagtgacct 128
Query: 784 tgatc-agtgggaaggccttggcgagggaattccctgttgtgccatccccatggtaacag 842
||||| ||||||||||| |||||| || |||||||| |||||||||||||||||||||
Sbjct: 127 tgatcttgtgggaaggccatggcgatggccttccctgtggtgccatccccatggtaacag 68
Query: 843 cagtc 847
|||||
Sbjct: 67 cagtc 63
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 758 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 701
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 700 ccaagcttgtcacagct 684
>gb|CN126096.1|CN126096 RHOH1_15_D05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_15_D05_A002 3', mRNA sequence
Length = 802
Score = 593 bits (299), Expect = e-167
Identities = 377/403 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 423 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 364
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 363 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 304
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 303 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 244
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 243 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 184
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 124
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 123 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 64
Query: 724 taacaacaccatcagccggtatcttgcgaatctcctgcggaag 766
| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 63 tgacaacaccatcagccggtatcttgcgaatctcctgtggaag 21
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 634 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 577
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 576 ccaagcttgtcacagct 560
>gb|CX612392.1|CX612392 GABR1_2_E06.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_E06_A002 3', mRNA sequence
Length = 781
Score = 593 bits (299), Expect = e-167
Identities = 377/403 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 423 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 364
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 363 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 304
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 303 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 244
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 243 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 184
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 124
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 123 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 64
Query: 724 taacaacaccatcagccggtatcttgcgaatctcctgcggaag 766
| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 63 tgacaacaccatcagccggtatcttgcgaatctcctgtggaag 21
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 634 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 577
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 576 ccaagcttgtcacagct 560
>gb|BE360281.1|BE360281 DG1_62_H05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 751
Score = 587 bits (296), Expect = e-166
Identities = 371/396 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 396 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 337
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 336 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 277
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 276 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 217
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 216 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 157
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 97
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 96 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 37
Query: 724 taacaacaccatcagccggtatcttgcgaatctcct 759
| ||||||||||||||||||||||||||||||||||
Sbjct: 36 tgacaacaccatcagccggtatcttgcgaatctcct 1
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 607 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 550
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 549 ccaagcttgtcacagct 533
>gb|BE360328.1|BE360328 DG1_62_C05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 557
Score = 585 bits (295), Expect = e-165
Identities = 370/395 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 395 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 336
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 335 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 276
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 275 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 216
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 215 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 156
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 96
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 95 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 36
Query: 724 taacaacaccatcagccggtatcttgcgaatctcc 758
| |||||||||||||||||||||||||||||||||
Sbjct: 35 tgacaacaccatcagccggtatcttgcgaatctcc 1
>gb|CN130357.1|CN130357 RHOH1_41_A06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_41_A06_A002 3', mRNA sequence
Length = 788
Score = 585 bits (295), Expect = e-165
Identities = 376/403 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 422 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 363
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 362 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 303
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 302 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 243
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| | ||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 242 cagagtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 183
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 123
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 122 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 63
Query: 724 taacaacaccatcagccggtatcttgcgaatctcctgcggaag 766
| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 62 tgacaacaccatcagccggtatcttgcgaatctcctgtggaag 20
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 633 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 576
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 575 ccaagcttgtcacagct 559
>gb|CN130866.1|CN130866 RHOH1_44_G11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_G11_A002 3', mRNA sequence
Length = 777
Score = 585 bits (295), Expect = e-165
Identities = 376/403 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 423 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 364
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 363 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 304
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 303 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 244
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 243 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 184
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 183 ccttcttgcaattggcaaggatcttcacgcaatcctcatcactccagtggtgcagcacca 124
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 123 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 64
Query: 724 taacaacaccatcagccggtatcttgcgaatctcctgcggaag 766
| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 63 tgacaacaccatcagccggtatcttgcgaatctcctgtggaag 21
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 634 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 577
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 576 ccaagcttgtcacagct 560
>gb|BE360911.1|BE360911 DG1_67_E10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 593
Score = 581 bits (293), Expect = e-164
Identities = 371/397 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 399 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 340
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 339 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 280
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||| ||| ||||||| |||||| |||||||||||||
Sbjct: 279 tcatcagcatcatgcagacgtccattacgaggtgagtttcaaacattactggtcctgagg 220
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 219 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 160
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 100
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 99 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 40
Query: 724 taacaacaccatcagccggtatcttgcgaatctcctg 760
| |||||||||||||||||||||||||||||||||||
Sbjct: 39 tgacaacaccatcagccggtatcttgcgaatctcctg 3
Score = 58.0 bits (29), Expect = 1e-006
Identities = 50/56 (89%), Gaps = 2/56 (3%)
Strand = Plus / Minus
Query: 167 acttctccaaacgaaagttaaacagatcgttgaggcaaaccaagcttgtcacagct 222
||||||||||| |||||||||||||||| | ||| |||||||||||||||||||
Sbjct: 589 acttctccaaatgaaagttaaacagatcatggag--caaccaagcttgtcacagct 536
>gb|CN133109.1|CN133109 OX1_10_E07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_10_E07_A002 3', mRNA sequence
Length = 761
Score = 561 bits (283), Expect = e-158
Identities = 358/383 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 383 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 324
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 323 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 264
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 263 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 204
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 203 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 144
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 84
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 83 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 24
Query: 724 taacaacaccatcagccggtatc 746
| |||||||||||||||||||||
Sbjct: 23 tgacaacaccatcagccggtatc 1
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 594 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 537
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 536 ccaagcttgtcacagct 520
>gb|CN130869.1|CN130869 RHOH1_44_H03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_H03_A002 3', mRNA sequence
Length = 741
Score = 531 bits (268), Expect = e-149
Identities = 355/384 (92%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 384 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 325
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 324 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccgggctcctt 265
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||| ||| ||||||| |||||| |||||||||||||
Sbjct: 264 tcatcagcatcatgcagacgtccattatgaggtgagtttcaaacattactggtcctgagg 205
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| |||| ||||||||||| ||||||||||| |||||||| |||||| |||||| ||||
Sbjct: 204 caaggtcaagaataatatcggcgatgacaactttccctccatcttcctttgaaggcattg 145
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 85
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 84 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataat 25
Query: 724 taacaacaccatcagccggtatct 747
| ||||||||||||||||||||||
Sbjct: 24 tgacaacaccatcagccggtatct 1
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 595 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 538
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 537 ccaagcttgtcacagct 521
>gb|CF430073.1|CF430073 PH1_26_C12.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_26_C12_A002 3', mRNA sequence
Length = 725
Score = 527 bits (266), Expect = e-148
Identities = 335/358 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 362 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 303
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 302 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 243
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 242 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 183
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 182 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 123
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 63
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacata 721
|||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 62 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacata 5
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 573 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 516
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 515 ccaagcttgtcacagct 499
>gb|CX618561.1|CX618561 GABR1_40_G11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_40_G11_A002 3', mRNA sequence
Length = 719
Score = 519 bits (262), Expect = e-145
Identities = 334/358 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 362 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 303
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 302 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 243
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 242 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 183
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| || |||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 182 cagggtcaaggataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 123
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 63
Query: 664 tcttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacata 721
|||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 62 tcttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacata 5
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 573 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 516
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 515 ccaagcttgtcacagct 499
>gb|CF433159.1|CF433159 NIT1_25_D06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_25_D06_A002 3', mRNA sequence
Length = 685
Score = 474 bits (239), Expect = e-132
Identities = 302/323 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 323 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 264
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 263 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 204
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 203 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 144
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 143 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 84
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 24
Query: 664 tcttaagtaacaccatttgagca 686
|||||||| |||||||||||||
Sbjct: 23 tcttaagtgtcaccatttgagca 1
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 534 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 477
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 476 ccaagcttgtcacagct 460
>gb|CF433636.1|CF433636 NIT1_28_B10.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_28_B10_A002 3', mRNA sequence
Length = 694
Score = 466 bits (235), Expect = e-129
Identities = 298/319 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 319 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 260
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 259 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 200
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 199 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 140
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 139 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 80
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 20
Query: 664 tcttaagtaacaccatttg 682
|||||||| |||||||||
Sbjct: 19 tcttaagtgtcaccatttg 1
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 530 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 473
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 472 ccaagcttgtcacagct 456
>gb|BZ330010.1|BZ330010 hv89d05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv89d05 5', DNA sequence
Length = 580
Score = 452 bits (228), Expect = e-125
Identities = 285/304 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 329 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 270
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 269 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 210
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 209 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 150
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 149 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 90
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 30
Query: 664 tctt 667
||||
Sbjct: 29 tctt 26
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 540 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 483
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 482 ccaagcttgtcacagct 466
>gb|BZ332786.1|BZ332786 hx30f05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx30f05 5', DNA sequence
Length = 450
Score = 452 bits (228), Expect = e-125
Identities = 285/304 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 314 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 255
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 254 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 195
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 194 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 135
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 134 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 75
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 15
Query: 664 tctt 667
||||
Sbjct: 14 tctt 11
>gb|CW398811.1|CW398811 fsbb001f088g17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f088g17, DNA
sequence
Length = 696
Score = 452 bits (228), Expect = e-125
Identities = 285/304 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 481 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 422
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 421 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 362
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 361 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 302
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 301 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 242
Query: 604 ccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 663
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccttcttgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcacca 182
Query: 664 tctt 667
||||
Sbjct: 181 tctt 178
Score = 89.7 bits (45), Expect = 4e-016
Identities = 70/77 (90%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | | || ||
Sbjct: 693 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatgggagc-aa 635
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 634 ccaagcttgtcacagct 618
Score = 81.8 bits (41), Expect = 1e-013
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 665 cttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacata 721
||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 58 cttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacata 2
>gb|CW053876.1|CW053876 104_294_10516221_115_30183 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516221, DNA
sequence
Length = 530
Score = 420 bits (212), Expect = e-116
Identities = 269/288 (93%)
Strand = Plus / Plus
Query: 380 caggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttctg 439
||||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||||| |
Sbjct: 1 caggacaccacgagctccaaagttcttgagcagcttatagtcactgaaccctgctttcag 60
Query: 440 gatgaggtcacgccagtcattcacgtcccgctgccggcctcctttcatcagcatcatgca 499
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgaggtcacgccagtcattcaagtcccgctgccggcctcctttcatcagcatcatgca 120
Query: 500 gacgtccattaggagttgagtttgaaacatgactggtcctgaggctgggtcgagaataat 559
||||||||||||||| ||||||| |||||| |||||||||||||| ||||| ||||||||
Sbjct: 121 gacgtccattaggaggtgagtttcaaacattactggtcctgaggcagggtcaagaataat 180
Query: 560 atctgcgatgacaaccttccctccctcttcccgtgaaggtattgccttcctgcagttggc 619
||| ||||||||||| |||||||| |||||| |||||||||||||||| |||| |||||
Sbjct: 181 atcagcgatgacaactttccctccatcttcctttgaaggtattgccttcttgcaattggc 240
Query: 620 aaggatcttcacgcagtcctcatcactccagtggtgcagcaccatctt 667
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaggatcttcacgcagtcctcatcactccagtggtgcagcaccatctt 288
Score = 149 bits (75), Expect = 5e-034
Identities = 111/123 (90%)
Strand = Plus / Plus
Query: 665 cttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 408 cttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataatt 467
Query: 725 aacaacaccatcagccggtatcttgcgaatctcctgcggaaggtccagtactgtgatctt 784
||||||||||||||||||||||||||||||||||| ||||| || || || |||| |||
Sbjct: 468 gacaacaccatcagccggtatcttgcgaatctcctgtggaagatctagcacagtgacctt 527
Query: 785 gat 787
|||
Sbjct: 528 gat 530
>gb|CF432631.1|CF432631 NIT1_18_A05.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_18_A05_A002 3', mRNA sequence
Length = 664
Score = 398 bits (201), Expect = e-109
Identities = 265/285 (92%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 285 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 226
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 225 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 166
Query: 484 tcatcagcatcatgcagacgtccatta-ggagttgagtttgaaacatgactggtcctgag 542
||||||||||||||||||||||||||| |||| ||||||| |||||| ||||||||||||
Sbjct: 165 tcatcagcatcatgcagacgtccattagggaggtgagtttcaaacattactggtcctgag 106
Query: 543 gctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtatt 602
|| ||||| ||||||||||| ||||||||||| |||||||| |||||| ||||||||||
Sbjct: 105 gcagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtatt 46
Query: 603 gccttcctgcagttggcaaggatcttcacgcagtcctcatcactc 647
|||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 45 gccttcttgcaattggcaaggatcttcacgcagtcctcatcactc 1
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 496 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 439
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 438 ccaagcttgtcacagct 422
>gb|CX616830.1|CX616830 GABR1_30_E05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_30_E05_A002 3', mRNA sequence
Length = 630
Score = 369 bits (186), Expect = e-100
Identities = 243/262 (92%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 262 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 203
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 202 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 143
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 142 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 83
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 82 cagggtcaagaataatatcagcgatgacaactttccctccatcttcctttgaaggtattg 23
Query: 604 ccttcctgcagttggcaaggat 625
||||| |||| |||||||||||
Sbjct: 22 ccttcttgcaattggcaaggat 1
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 473 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 416
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 415 ccaagcttgtcacagct 399
Score = 40.1 bits (20), Expect = 0.32
Identities = 34/38 (89%), Gaps = 3/38 (7%)
Strand = Plus / Minus
Query: 300 atgtagatttcttcgcagtaccaaaccacaatataaag 337
|||||||||||||||| ||||||||||||||||||
Sbjct: 326 atgtagatttcttcgcg---ccaaaccacaatataaag 292
>gb|CX608685.1|CX608685 ANR1_40_D04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_40_D04_A002 3', mRNA sequence
Length = 629
Score = 339 bits (171), Expect = 3e-091
Identities = 234/255 (91%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 255 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 196
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 195 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 136
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
|||||||||||||||| ||||||||| |||| ||||||| |||||| |||||||||||||
Sbjct: 135 tcatcagcatcatgcaaacgtccattgggaggtgagtttcaaacattactggtcctgagg 76
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtgaaggtattg 603
| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 75 cagggtcaagaataatatccgcgatgacaactttccctccatcttcctttgaaggtattg 16
Query: 604 ccttcctgcagttgg 618
||||| |||| ||||
Sbjct: 15 ccttcttgcaattgg 1
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 466 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 409
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 408 ccaagcttgtcacagct 392
>gb|AW922979.1|AW922979 DG1_47_A02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 331 bits (167), Expect = 6e-089
Identities = 212/227 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 232 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 173
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 172 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 113
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 112 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 53
Query: 544 ctgggtcgagaataatatctgcgatgacaaccttccctccctcttcc 590
| ||||| ||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 52 cagggtcaagaataatatcagcgatgacaactttccctccatcttcc 6
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 443 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 386
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 385 ccaagcttgtcacagct 369
>gb|AW922668.1|AW922668 DG1_45_B09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 453
Score = 299 bits (151), Expect = 2e-079
Identities = 187/199 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 209 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 150
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 149 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 90
Query: 484 tcatcagcatcatgcagacgtccattaggagttgagtttgaaacatgactggtcctgagg 543
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 89 tcatcagcatcatgcagacgtccattaggaggtgagtttcaaacattactggtcctgagg 30
Query: 544 ctgggtcgagaataatatc 562
| ||||| |||||||||||
Sbjct: 29 cagggtcaagaataatatc 11
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 420 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 363
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 362 ccaagcttgtcacagct 346
>gb|BZ780885.1|BZ780885 ii21d08.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii21d08, DNA sequence
Length = 704
Score = 220 bits (111), Expect = 2e-055
Identities = 165/183 (90%)
Strand = Plus / Plus
Query: 665 cttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 65 cttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataatt 124
Query: 725 aacaacaccatcagccggtatcttgcgaatctcctgcggaaggtccagtactgtgatctt 784
||||||||||||||||||||||||||||||||||| ||||| || || || |||| |||
Sbjct: 125 gacaacaccatcagccggtatcttgcgaatctcctgtggaagatctagcacagtgacctt 184
Query: 785 gatcagtgggaaggccttggcgagggaattccctgttgtgccatccccatggtaacagca 844
|||| ||||||||||| |||||| || |||||||| |||||||||||||||||||||||
Sbjct: 185 gatctgtgggaaggccatggcgatggccttccctgtggtgccatccccatggtaacagca 244
Query: 845 gtc 847
|||
Sbjct: 245 gtc 247
>gb|CL187536.1|CL187536 104_403_10900957_116_32463_059 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900957, DNA
sequence
Length = 712
Score = 220 bits (111), Expect = 2e-055
Identities = 165/183 (90%)
Strand = Plus / Plus
Query: 665 cttaagtaacaccatttgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct: 180 cttaagtgtcaccatttgagcaggtgggatggacttgaacatgtcacctccaacataatt 239
Query: 725 aacaacaccatcagccggtatcttgcgaatctcctgcggaaggtccagtactgtgatctt 784
||||||||||||||||||||||||||||||||||| ||||| || || || |||| |||
Sbjct: 240 gacaacaccatcagccggtatcttgcgaatctcctgtggaagatctagcacagtgacctt 299
Query: 785 gatcagtgggaaggccttggcgagggaattccctgttgtgccatccccatggtaacagca 844
|||| ||||||||||| |||||| || |||||||| |||||||||||||||||||||||
Sbjct: 300 gatctgtgggaaggccatggcgatggccttccctgtggtgccatccccatggtaacagca 359
Query: 845 gtc 847
|||
Sbjct: 360 gtc 362
Score = 107 bits (54), Expect = 2e-021
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 610 tgcagttggcaaggatcttcacgcagtcctcatcactccagtggtgcagcaccatctt 667
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgcaattggcaaggatcttcacgcagtcctcatcactccagtggtgcagcaccatctt 60
>gb|CN128469.1|CN128469 RHOH1_29_F01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_29_F01_A002 5', mRNA sequence
Length = 841
Score = 210 bits (106), Expect = 2e-052
Identities = 154/170 (90%)
Strand = Plus / Minus
Query: 678 atttgagcacgtgggatggatttgaacatgtcacctccaacatagttaacaacaccatca 737
||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 841 atttgagcaggtgggatggacttgaacatgtcacctccaacataattgacaacaccatca 782
Query: 738 gccggtatcttgcgaatctcctgcggaaggtccagtactgtgatcttgatcagtgggaag 797
||||||||||||||||||||||| ||||| || || || |||| ||||||| ||||||||
Sbjct: 781 gccggtatcttgcgaatctcctgtggaagatctagcacagtgaccttgatctgtgggaag 722
Query: 798 gccttggcgagggaattccctgttgtgccatccccatggtaacagcagtc 847
||| |||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 721 gccatggcgatggccttccctgtggtgccatccccatggtaacagcagtc 672
>gb|CN130430.1|CN130430 RHOH1_41_A06.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_41_A06_A002 5', mRNA sequence
Length = 818
Score = 200 bits (101), Expect = 1e-049
Identities = 149/165 (90%)
Strand = Plus / Minus
Query: 683 agcacgtgggatggatttgaacatgtcacctccaacatagttaacaacaccatcagccgg 742
|||| |||||||||| ||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 818 agcaggtgggatggacttgaacatgtcacctccaacataattgacaacaccatcagccgg 759
Query: 743 tatcttgcgaatctcctgcggaaggtccagtactgtgatcttgatcagtgggaaggcctt 802
|||||||||||||||||| ||||| || || || |||| ||||||| ||||||||||| |
Sbjct: 758 tatcttgcgaatctcctgtggaagatctagcacagtgaccttgatctgtgggaaggccat 699
Query: 803 ggcgagggaattccctgttgtgccatccccatggtaacagcagtc 847
||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 698 ggcgatggccttccctgtggtgccatccccatggtaacagcagtc 654
>gb|CF428474.1|CF428474 PH1_15_E11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_15_E11_A002 3', mRNA sequence
Length = 502
Score = 192 bits (97), Expect = 4e-047
Identities = 118/125 (94%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 125 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 66
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 65 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccggcctcctt 6
Query: 484 tcatc 488
|||||
Sbjct: 5 tcatc 1
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 336 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 279
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 278 ccaagcttgtcacagct 262
>gb|CL167819.1|CL167819 104_365_10810356_114_31804_036 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810356, DNA
sequence
Length = 760
Score = 190 bits (96), Expect = 1e-046
Identities = 242/290 (83%), Gaps = 3/290 (1%)
Strand = Plus / Plus
Query: 377 ctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgcttt 436
||||| ||||||||||||||||||||| | | | ||| ||||||||||| || |||||
Sbjct: 276 ctccaagacacctcgagctccaaatttgcttactaacttatagtcactgaacccagcttt 335
Query: 437 ctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctttcatcagcatcat 496
| || || ||||||||| ||||| | ||||| ||||| ||||||||||||||||||||
Sbjct: 336 catgaagatgtcacgccactcattttcatcccgttgccgtcctcctttcatcagcatcat 395
Query: 497 gcagacgtccattaggagttgagtttgaaacatgactggtcctgaggctgggtcgagaat 556
|| |||||||||||| ||||| |||| | |||| ||| |||||||| ||||| | |
Sbjct: 396 gccgacgtccattagaagttgtgtttcatacat---tggccctgaggcggggtcaattac 452
Query: 557 aatatctgcgatgacaaccttccctccctcttcccgtgaaggtattgccttcctgcagtt 616
|||||| |||||| ||| || ||||| || || |||||||||| ||||||||||| ||
Sbjct: 453 tatatctccgatgagaactttgcctccttcctctcgtgaaggtacggccttcctgcaatt 512
Query: 617 ggcaaggatcttcacgcagtcctcatcactccagtggtgcagcaccatct 666
|| |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 513 ggaaaggatcttcacacagtcctcatcactccagtggtgtagcaccatct 562
>gb|CL167820.1|CL167820 104_365_10810356_116_31805_036 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810356, DNA
sequence
Length = 766
Score = 190 bits (96), Expect = 1e-046
Identities = 242/290 (83%), Gaps = 3/290 (1%)
Strand = Plus / Minus
Query: 377 ctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgcttt 436
||||| ||||||||||||||||||||| | | | ||| ||||||||||| || |||||
Sbjct: 562 ctccaagacacctcgagctccaaatttgcttactaacttatagtcactgaacccagcttt 503
Query: 437 ctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctttcatcagcatcat 496
| || || ||||||||| ||||| | ||||| ||||| ||||||||||||||||||||
Sbjct: 502 catgaagatgtcacgccactcattttcatcccgttgccgtcctcctttcatcagcatcat 443
Query: 497 gcagacgtccattaggagttgagtttgaaacatgactggtcctgaggctgggtcgagaat 556
|| |||||||||||| ||||| |||| | |||| ||| |||||||| ||||| | |
Sbjct: 442 gccgacgtccattagaagttgtgtttcatacat---tggccctgaggcggggtcaattac 386
Query: 557 aatatctgcgatgacaaccttccctccctcttcccgtgaaggtattgccttcctgcagtt 616
|||||| |||||| ||| || ||||| || || |||||||||| ||||||||||| ||
Sbjct: 385 tatatctccgatgagaactttgcctccttcctctcgtgaaggtacggccttcctgcaatt 326
Query: 617 ggcaaggatcttcacgcagtcctcatcactccagtggtgcagcaccatct 666
|| |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 325 ggaaaggatcttcacacagtcctcatcactccagtggtgtagcaccatct 276
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 688 gtgggatggatttgaacatgtcacctccaacatagt 723
|||||||| | |||||||| ||||||||||||||||
Sbjct: 36 gtgggatgaacttgaacatatcacctccaacatagt 1
>gb|CW152445.1|CW152445 104_553_11144495_116_36326_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144495, DNA
sequence
Length = 714
Score = 190 bits (96), Expect = 1e-046
Identities = 242/290 (83%), Gaps = 3/290 (1%)
Strand = Plus / Plus
Query: 377 ctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgcttt 436
||||| ||||||||||||||||||||| | | | ||| ||||||||||| || |||||
Sbjct: 314 ctccaagacacctcgagctccaaatttgcttactaacttatagtcactgaacccagcttt 373
Query: 437 ctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctttcatcagcatcat 496
| || || ||||||||| ||||| | ||||| ||||| ||||||||||||||||||||
Sbjct: 374 catgaagatgtcacgccactcattttcatcccgttgccgtcctcctttcatcagcatcat 433
Query: 497 gcagacgtccattaggagttgagtttgaaacatgactggtcctgaggctgggtcgagaat 556
|| |||||||||||| ||||| |||| | |||| ||| |||||||| ||||| | |
Sbjct: 434 gccgacgtccattagaagttgtgtttcatacat---tggccctgaggcggggtcaattac 490
Query: 557 aatatctgcgatgacaaccttccctccctcttcccgtgaaggtattgccttcctgcagtt 616
|||||| |||||| ||| || ||||| || || |||||||||| ||||||||||| ||
Sbjct: 491 tatatctccgatgagaactttgcctccttcctctcgtgaaggtacggccttcctgcaatt 550
Query: 617 ggcaaggatcttcacgcagtcctcatcactccagtggtgcagcaccatct 666
|| |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 551 ggaaaggatcttcacacagtcctcatcactccagtggtgtagcaccatct 600
>gb|CN130935.1|CN130935 RHOH1_44_G11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_G11_A002 5', mRNA sequence
Length = 815
Score = 178 bits (90), Expect = 5e-043
Identities = 136/150 (90%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 699 ttgaacatgtcacctccaacatagttaacaacaccatcagccggtatcttgcgaatctcc 758
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 815 ttgaacatgtcacctccaacataattgacaacaccatcagccggtatcttgcgaatctcc 756
Query: 759 tgcggaaggtccagtactgtgatcttgatcagtgggaaggccttggcgagggaattccct 818
|| ||||| || || || |||| ||||||| ||||||||||| |||||| || ||||||
Sbjct: 755 tgtggaagatctagcacagtgaccttgatctgtgggaaggccatggcgatggccttccct 696
Query: 819 gtt-gtgccatccccatggtaacagcagtc 847
||| ||||||||||||||||||||||||||
Sbjct: 695 gttggtgccatccccatggtaacagcagtc 666
>gb|BZ332785.1|BZ332785 hx30f05.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx30f05 5', DNA sequence
Length = 750
Score = 176 bits (89), Expect = 2e-042
Identities = 116/125 (92%)
Strand = Plus / Plus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
|||| |||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 626 cttaaggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 685
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcctcctt 483
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 686 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccgggctcctt 745
Query: 484 tcatc 488
|||||
Sbjct: 746 tcatc 750
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 415 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 472
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 473 ccaagcttgtcacagct 489
>gb|AW922732.1|AW922732 DG1_45_B09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 465
Score = 167 bits (84), Expect = 2e-039
Identities = 105/112 (93%)
Strand = Plus / Minus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 112 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 53
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccg 475
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 52 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccgctgccg 1
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 323 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 266
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 265 ccaagcttgtcacagct 249
>gb|CW398812.1|CW398812 fsbb001f088g17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f088g17, DNA
sequence
Length = 714
Score = 155 bits (78), Expect = 8e-036
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 364 cttagggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcac 423
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 609 cttagggatagatctccaggacaccacgagctccaaagttcttgagcagcttatagtcac 668
Query: 424 tgaaacctgctttctggatgaggtcacgccagtcattcacgtcccg 469
|||| ||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 669 tgaaccctgctttcaggatgaggtcacgccagtcattcaagtcccg 714
Score = 91.7 bits (46), Expect = 1e-016
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 146 catctcatgatgtgcctagatacttctccaaacgaaagttaaacagatcgttgaggcaaa 205
|||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 398 catctcatgatgtgccaagatacttctccaaatgaaagttaaacagatcatggag--caa 455
Query: 206 ccaagcttgtcacagct 222
|||||||||||||||||
Sbjct: 456 ccaagcttgtcacagct 472
>gb|CW152446.1|CW152446 104_553_11144495_148_36329_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144495, DNA
sequence
Length = 655
Score = 147 bits (74), Expect = 2e-033
Identities = 209/251 (83%), Gaps = 5/251 (1%)
Strand = Plus / Minus
Query: 417 tagtcactgaaacctgctttctggatgaggtcacgccagtcattcacgtcccgctgccgg 476
||||||||||| || |||||| || || ||||||||| ||||| | ||||| |||||
Sbjct: 639 tagtcactgaacccagctttcatgaagatgtcacgccactcattttcatcccg-tgccgt 581
Query: 477 cctccttt-catcagcatcatgcagacgtccattaggagttgagtttgaaacatgactgg 535
|||||||| |||||||||||||| |||||||||||| ||||| |||| | |||| |||
Sbjct: 580 cctccttttcatcagcatcatgccgacgtccattagaagttgtgtttcatacat---tgg 524
Query: 536 tcctgaggctgggtcgagaataatatctgcgatgacaaccttccctccctcttcccgtga 595
| |||||| ||||| | | |||||| |||||| ||| || ||||| || || |||||
Sbjct: 523 ccntgaggcggggtcaattactatatctccgatgagaactttgcctccttcctctcgtga 464
Query: 596 aggtattgccttcctgcagttggcaaggatcttcacgcagtcctcatcactccagtggtg 655
||||| ||||||||||| |||| |||||||||||| |||||||||||||||||||||||
Sbjct: 463 aggtacggccttcctgcaattggaaaggatcttcacacagtcctcatcactccagtggtg 404
Query: 656 cagcaccatct 666
||||||||||
Sbjct: 403 tagcaccatct 393
Score = 75.8 bits (38), Expect = 6e-012
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 688 gtgggatggatttgaacatgtcacctccaacatagttaacaacaccatcagccggtatct 747
|||||||| | |||||||| |||||||||||||||||||| ||||| ||||| || || |
Sbjct: 153 gtgggatgaacttgaacatatcacctccaacatagttaacgacaccgtcagcaggaattt 94
Query: 748 tgc-gaatctcctgcggaaggtccagtactgtgatctt 784
| | |||||||||| |||| |||||| || ||||||||
Sbjct: 93 ttctgaatctcctgtggaatgtccagcacggtgatctt 56
>gb|BE362899.2|BE362899 DG1_90_D10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 203
Score = 103 bits (52), Expect = 3e-020
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 120 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 61
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
||||||||||||||| | |||||||||||||| ||||||||||
Sbjct: 60 tgagcacgtgggatgaaactgaacatgtcaccttcaacatagtt 17
>gb|CF428485.1|CF428485 PH1_15_E11.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_15_E11_A002 5', mRNA sequence
Length = 499
Score = 99.6 bits (50), Expect = 4e-019
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 750 cgaatctcctgcggaaggtccagtactgtgatcttgatcagtgggaaggccttggcgagg 809
||||||||||| ||||| || || || |||| ||||||| ||||||||||| |||||| |
Sbjct: 499 cgaatctcctgtggaagatctagcacagtgaccttgatctgtgggaaggccatggcgatg 440
Query: 810 gaattccctgttgtgccatccccatggtaacagcagtc 847
| |||||||| ||||||||||||||||||||||||||
Sbjct: 439 gccttccctgtggtgccatccccatggtaacagcagtc 402
>gb|BE361040.1|BE361040 DG1_69_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 653
Score = 97.6 bits (49), Expect = 2e-018
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 510 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 569
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 570 tgagcangtgggatgaaactgaacatgtcaccttcaacatagtt 613
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 285 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 332
>gb|AW676693.1|AW676693 DG1_13_G09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 614
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 122 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 63
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 62 tgagcaggtgggatgaaactgaacatgtcaccttcaacatagtt 19
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 347 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 300
>gb|AW923129.1|AW923129 DG1_49_C12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 651
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 169 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 110
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 109 tgagcaggtgggatgaaactgaacatgtcaccttcaacatagtt 66
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 394 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 347
>gb|BE126083.1|BE126083 DG1_65_H08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 605
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 125 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 66
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 65 tgagcaggtgggatgaaactgaacatgtcaccttcaacatagtt 22
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 350 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 303
>gb|BE355160.1|BE355160 DG1_10_E09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 187 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 128
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 127 tgagcaggtgggatgaaactgaacatgtcaccttcaacatagtt 84
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 412 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 365
>gb|BE355636.1|BE355636 DG1_115_C05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 644
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 144 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 85
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 84 tgagcaggtgggatgaaactgaacatgtcaccttcaacatagtt 41
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 369 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 322
>gb|BE356126.1|BE356126 DG1_122_H01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 717
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 217 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 158
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 157 tgagcaggtgggatgaaactgaacatgtcaccttcaacatagtt 114
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 442 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 395
>gb|BE356245.1|BE356245 DG1_123_B01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 695
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 368 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 309
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 308 tgagcaggtgggatgaaactgaacatgtcaccttcaacatagtt 265
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 593 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 546
>gb|BE356626.1|BE356626 DG1_126_E08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 605
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 222 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 163
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 162 tgagcaggtgggatgaaactgaacatgtcaccttcaacatagtt 119
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 447 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 400
>gb|BE356953.1|BE356953 DG1_145_G07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 662
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 183 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 124
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 123 tgagcaggtgggatgaaactgaacatgtcaccttcaacatagtt 80
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 408 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 361
>gb|BE357192.1|BE357192 DG1_147_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 735
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 621 aggatcttcacgcagtcctcatcactccagtggtgcagcaccatcttaagtaacaccatt 680
||||| |||||||||||||||||| |||||||||||||||| | ||| || | ||| ||
Sbjct: 286 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagctttagcatcacagtt 227
Query: 681 tgagcacgtgggatggatttgaacatgtcacctccaacatagtt 724
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 226 tgagcaggtgggatgaaactgaacatgtcaccttcaacatagtt 183
Score = 40.1 bits (20), Expect = 0.32
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 390 cgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttc 437
||||||||||||||||| | | ||| ||||| ||||| |||||||||
Sbjct: 511 cgagctccaaatttctttaaaatcttatagtcgctgaaccctgctttc 464
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 211,387
Number of Sequences: 832831
Number of extensions: 211387
Number of successful extensions: 55209
Number of sequences better than 0.5: 222
Number of HSP's better than 0.5 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54643
Number of HSP's gapped (non-prelim): 444
length of query: 847
length of database: 491,359,669
effective HSP length: 20
effective length of query: 827
effective length of database: 474,703,049
effective search space: 392579421523
effective search space used: 392579421523
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)