BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750927.2.1
(1331 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sor... 611 e-173
gb|BG049032.1|BG049032 OV1_22_D05.g1_A002 Ovary 1 (OV1) Sor... 555 e-156
gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorgh... 295 5e-078
gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorgh... 295 5e-078
gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorgh... 295 5e-078
gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle ... 295 5e-078
gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle... 295 5e-078
gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription... 295 5e-078
gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum m... 293 2e-077
gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum m... 293 2e-077
gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation... 293 2e-077
gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorg... 293 2e-077
gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorg... 293 2e-077
gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sor... 293 2e-077
gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorg... 285 5e-075
gb|CW293027.1|CW293027 104_773_11414425_148_35591_009 Sorgh... 228 1e-057
gb|CW407708.1|CW407708 fsbb001f101e21k0 Sorghum methylation... 226 4e-057
gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation... 220 3e-055
gb|CW210331.1|CW210331 104_640_11189738_116_37000_003 Sorgh... 198 9e-049
gb|BF657151.1|BF657151 OV2_21_D05.b1_A002 Ovary 2 (OV2) Sor... 194 1e-047
gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorgh... 190 2e-046
gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (L... 190 2e-046
gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sor... 190 2e-046
gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sor... 190 2e-046
gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2... 190 2e-046
gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorgh... 188 9e-046
gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation... 188 9e-046
gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infecte... 188 9e-046
gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated ... 188 9e-046
gb|CW214921.1|CW214921 104_647_11194268_116_37464_080 Sorgh... 184 1e-044
gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorgh... 180 2e-043
gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorgh... 180 2e-043
gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorgh... 180 2e-043
gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation... 180 2e-043
gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation... 180 2e-043
gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Mer... 180 2e-043
gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Mer... 180 2e-043
gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorg... 180 2e-043
gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sor... 180 2e-043
gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sor... 180 2e-043
gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sor... 180 2e-043
gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sor... 180 2e-043
gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sor... 180 2e-043
gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sor... 180 2e-043
gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation... 178 9e-043
gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation... 178 9e-043
gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorgh... 170 2e-040
gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorgh... 170 2e-040
gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorgh... 170 2e-040
gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-lik... 170 2e-040
gb|AY827471.1| Sorghum bicolor MADS box transcription facto... 170 2e-040
gb|CW181349.1|CW181349 104_596_11163460_116_36650_010 Sorgh... 163 5e-038
gb|CW184444.1|CW184444 104_600_11165153_148_36682_067 Sorgh... 163 5e-038
gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sor... 163 5e-038
gb|CW230669.1|CW230669 104_679_11210696_116_37485_022 Sorgh... 161 2e-037
gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seed... 161 2e-037
gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated... 161 2e-037
gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum b... 161 2e-037
gb|CW359630.1|CW359630 fsbb001f027f15k0 Sorghum methylation... 159 8e-037
gb|BG240086.1|BG240086 OV1_17_G05.b1_A002 Ovary 1 (OV1) Sor... 159 8e-037
gb|BG241308.1|BG241308 OV1_40_G05.b1_A002 Ovary 1 (OV1) Sor... 159 8e-037
gb|CF431741.1|CF431741 NIT1_10_D03.g1_A002 Nitrogen-deficie... 159 8e-037
gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box prot... 159 8e-037
gb|CW322676.1|CW322676 104_816_11476224_116_35954_088 Sorgh... 157 3e-036
gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorgh... 153 5e-035
gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum m... 153 5e-035
gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorgh... 153 5e-035
gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorgh... 153 5e-035
gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorgh... 153 5e-035
gb|CW409217.1|CW409217 fsbb001f103g24f0 Sorghum methylation... 153 5e-035
gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorg... 153 5e-035
gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorg... 153 5e-035
gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sor... 153 5e-035
gb|CW032589.1|CW032589 104_261_10501470_114_30363 Sorghum m... 143 5e-032
gb|CW386489.1|CW386489 fsbb001f070g18k0 Sorghum methylation... 141 2e-031
gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) ... 133 5e-029
gb|CW096314.1|CW096314 104_461_11001822_116_34335_017 Sorgh... 131 2e-028
gb|CL181374.1|CL181374 104_392_10896713_116_31926_089 Sorgh... 119 7e-025
gb|CL181375.1|CL181375 104_392_10896713_148_31925_089 Sorgh... 119 7e-025
gb|CW023615.1|CW023615 104_163_10432547_1_30001 Sorghum met... 119 7e-025
gb|CW032483.1|CW032483 104_261_10501401_115_30364 Sorghum m... 119 7e-025
gb|CD463019.1|CD463019 ETH1_41_H12.g1_A002 Ethylene-treated... 119 7e-025
gb|BF586649.1|BF586649 FM1_29_H03.b1_A003 Floral-Induced Me... 111 2e-022
gb|BF705575.1|BF705575 RHIZ2_4_H03.b1_A003 Rhizome2 (RHIZ2)... 111 2e-022
gb|CW195540.1|CW195540 104_619_11180693_116_36805_027 Sorgh... 107 3e-021
gb|CW195541.1|CW195541 104_619_11180693_148_36801_027 Sorgh... 107 3e-021
gb|BZ694660.1|BZ694660 SP__Ba0050A11.f SP__Ba Sorghum propi... 105 1e-020
gb|CL171822.1|CL171822 104_373_10889698_148_31776_370 Sorgh... 105 1e-020
gb|CW249676.1|CW249676 104_711_11222976_116_35044_088 Sorgh... 105 1e-020
gb|CW249677.1|CW249677 104_711_11222976_148_35048_088 Sorgh... 105 1e-020
gb|CW275678.1|CW275678 104_749_11405089_148_35390_013 Sorgh... 105 1e-020
gb|CW480188.1|CW480188 fsbb001f239c02f0 Sorghum methylation... 105 1e-020
gb|CW480189.1|CW480189 fsbb001f239c02k0 Sorghum methylation... 105 1e-020
gb|CW788871.1|CW788871 SP__Ba0050A11.f SP__Ba Sorghum propi... 105 1e-020
gb|CW296060.1|CW296060 104_777_11461289_148_35626_069 Sorgh... 103 4e-020
gb|CW297229.1|CW297229 104_779_11461931_116_35636_042 Sorgh... 103 4e-020
gb|CW452258.1|CW452258 fsbb001f192l07k0 Sorghum methylation... 103 4e-020
gb|AW681038.1|AW681038 WS1_8_D09.b1_A002 Water-stressed 1 (... 103 4e-020
gb|BG739474.1|BG739474 EM1_81_D03.b1_A002 Embryo 1 (EM1) So... 103 4e-020
gb|BM324114.1|BM324114 PIC1_24_D02.b1_A002 Pathogen-infecte... 103 4e-020
gb|BM325449.1|BM325449 PIC1_44_F08.b1_A002 Pathogen-infecte... 103 4e-020
gb|CB927715.1|CB927715 ABA1_27_E04.g1_A012 Abscisic acid-tr... 103 4e-020
gb|CD431870.1|CD431870 ETH1_11_B03.g1_A002 Ethylene-treated... 103 4e-020
gb|CF486426.1|CF486426 POL1_37_D04.g1_A002 Pollen Sorghum b... 103 4e-020
gb|CN135385.1|CN135385 OX1_32_B05.g1_A002 Oxidatively-stres... 103 4e-020
gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sor... 98 3e-018
gb|CW329596.1|CW329596 104_826_11479928_116_35994_028 Sorgh... 96 1e-017
gb|CW329597.1|CW329597 104_826_11479928_148_35993_028 Sorgh... 96 1e-017
gb|CW393458.1|CW393458 fsbb001f080i11k0 Sorghum methylation... 96 1e-017
gb|CW472381.1|CW472381 fsbb001f227e20f0 Sorghum methylation... 96 1e-017
gb|CW498786.1|CW498786 fsbb001f293d08f0 Sorghum methylation... 96 1e-017
gb|CF487280.1|CF487280 POL1_42_G07.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CW040533.1|CW040533 104_274_10506199_116_30433 Sorghum m... 94 4e-017
gb|CW040534.1|CW040534 104_274_10506199_116_30479 Sorghum m... 94 4e-017
gb|CW040535.1|CW040535 104_274_10506199_116_30481 Sorghum m... 94 4e-017
gb|CW457553.1|CW457553 fsbb001f203g17k0 Sorghum methylation... 92 2e-016
gb|CW142324.1|CW142324 104_533_11136795_116_34938_006 Sorgh... 90 6e-016
gb|CW142325.1|CW142325 104_533_11136795_148_34942_006 Sorgh... 90 6e-016
gb|CW448512.1|CW448512 fsbb001f182c17f0 Sorghum methylation... 90 6e-016
gb|CW448513.1|CW448513 fsbb001f182c17k0 Sorghum methylation... 90 6e-016
gb|CW502333.1|CW502333 fsbb001f298j20f0 Sorghum methylation... 90 6e-016
gb|CW502334.1|CW502334 fsbb001f298j20k0 Sorghum methylation... 90 6e-016
gb|CL171821.1|CL171821 104_373_10889698_116_31777_370 Sorgh... 84 4e-014
gb|CW457552.1|CW457552 fsbb001f203g17f0 Sorghum methylation... 84 4e-014
gb|CW096315.1|CW096315 104_461_11001822_148_34331_017 Sorgh... 82 2e-013
gb|CW472382.1|CW472382 fsbb001f227e20k0 Sorghum methylation... 82 2e-013
gb|CW296059.1|CW296059 104_777_11461289_116_35622_069 Sorgh... 76 9e-012
gb|CW072287.1|CW072287 104_325_10592182_114_30538 Sorghum m... 74 4e-011
gb|CW214896.1|CW214896 104_647_11194255_148_37166_032 Sorgh... 74 4e-011
gb|CW411862.1|CW411862 fsbb001f107d12k0 Sorghum methylation... 74 4e-011
gb|CW296923.1|CW296923 104_778_11461772_116_35631_066 Sorgh... 72 1e-010
gb|CW296924.1|CW296924 104_778_11461772_148_35635_066 Sorgh... 72 1e-010
gb|BF704612.1|BF704612 FM1_49_C04.b1_A003 Floral-Induced Me... 72 1e-010
gb|CW199961.1|CW199961 104_625_11183794_116_36864_043 Sorgh... 70 6e-010
gb|CD432822.1|CD432822 ETH1_33_F08.g1_A002 Ethylene-treated... 70 6e-010
gb|CW034880.1|CW034880 104_265_10502824_115_30379 Sorghum m... 68 2e-009
gb|CW117952.1|CW117952 104_494_11107937_148_34681_075 Sorgh... 68 2e-009
gb|CW209670.1|CW209670 104_639_11189376_116_36992_084 Sorgh... 68 2e-009
gb|CW209671.1|CW209671 104_639_11189376_148_36991_084 Sorgh... 68 2e-009
gb|CD432530.1|CD432530 ETH1_30_C08.g1_A002 Ethylene-treated... 68 2e-009
gb|CL150340.1|CL150340 104_332_10778461_116_31358_013 Sorgh... 66 9e-009
gb|CW088554.1|CW088554 104_433_10948220_114_32568_072 Sorgh... 66 9e-009
gb|CW088555.1|CW088555 104_433_10948220_116_32578_072 Sorgh... 66 9e-009
gb|CW422054.1|CW422054 fsbb001f131c13f0 Sorghum methylation... 66 9e-009
gb|CF430206.1|CF430206 PH1_26_B03.g1_A002 Phosphorous-defic... 66 9e-009
gb|CW063376.1|CW063376 104_309_10521968_114_30136 Sorghum m... 64 4e-008
gb|CW273794.1|CW273794 104_746_11404091_116_35362_040 Sorgh... 64 4e-008
gb|CW327344.1|CW327344 104_823_11478696_116_35978_096 Sorgh... 64 4e-008
gb|BE596704.1|BE596704 PI1_58_F04.b1_A002 Pathogen induced ... 64 4e-008
gb|BF421169.1|BF421169 FM1_6_C07.b1_A003 Floral-Induced Mer... 64 4e-008
gb|BM323459.1|BM323459 PIC1_19_E07.b1_A002 Pathogen-infecte... 64 4e-008
gb|CL167956.1|CL167956 104_365_10810460_116_31805_140 Sorgh... 62 1e-007
gb|CW064669.1|CW064669 104_311_10522699_114_30118 Sorghum m... 62 1e-007
gb|CW142648.1|CW142648 104_534_11136977_148_34944_077 Sorgh... 62 1e-007
gb|CW147117.1|CW147117 104_540_11139346_116_34999_043 Sorgh... 62 1e-007
gb|CW248956.1|CW248956 104_710_11222585_148_35035_071 Sorgh... 62 1e-007
gb|CW251622.1|CW251622 104_714_11224036_116_35067_010 Sorgh... 62 1e-007
gb|CW426063.1|CW426063 fsbb001f137e12f0 Sorghum methylation... 62 1e-007
gb|CW426064.1|CW426064 fsbb001f137e12k0 Sorghum methylation... 62 1e-007
gb|CW492794.1|CW492794 fsbb001f283e05k0 Sorghum methylation... 62 1e-007
gb|CF432922.1|CF432922 NIT1_19_H01.g1_A002 Nitrogen-deficie... 62 1e-007
gb|CL176346.1|CL176346 104_382_10893067_116_31763_283 Sorgh... 60 6e-007
gb|CW393457.1|CW393457 fsbb001f080i11f0 Sorghum methylation... 60 6e-007
gb|AW678464.1|AW678464 WS1_16_D12.b1_A002 Water-stressed 1 ... 60 6e-007
gb|AW678480.1|AW678480 WS1_16_D03.b1_A002 Water-stressed 1 ... 60 6e-007
gb|AW746875.1|AW746875 WS1_56_C05.b1_A002 Water-stressed 1 ... 60 6e-007
gb|AW924005.1|AW924005 WS1_32_E02.b1_A002 Water-stressed 1 ... 60 6e-007
gb|AW924046.1|AW924046 WS1_49_D06.b1_A002 Water-stressed 1 ... 60 6e-007
gb|BE365263.1|BE365263 PI1_26_D10.b1_A002 Pathogen induced ... 60 6e-007
gb|BE600878.1|BE600878 PI1_92_D01.b1_A002 Pathogen induced ... 60 6e-007
gb|BE601014.1|BE601014 PI1_95_H02.b1_A002 Pathogen induced ... 60 6e-007
gb|BG355470.1|BG355470 EM1_16_H03.b1_A002 Embryo 1 (EM1) So... 60 6e-007
gb|BG933507.1|BG933507 WS1_4_C03.b1_A002 Water-stressed 1 (... 60 6e-007
gb|BM323902.1|BM323902 PIC1_29_A07.b1_A002 Pathogen-infecte... 60 6e-007
gb|BM324399.1|BM324399 PIC1_27_G12.b1_A002 Pathogen-infecte... 60 6e-007
gb|CF484314.1|CF484314 POL1_4_B10.g1_A002 Pollen Sorghum bi... 60 6e-007
gb|CN129656.1|CN129656 RHOH1_36_D08.g1_A002 Acid- and alkal... 60 6e-007
gb|CN132011.1|CN132011 OX1_3_C05.g1_A002 Oxidatively-stress... 60 6e-007
gb|CN132026.1|CN132026 OX1_3_D10.g1_A002 Oxidatively-stress... 60 6e-007
gb|CN134777.1|CN134777 OX1_28_A03.g1_A002 Oxidatively-stres... 60 6e-007
gb|CN135407.1|CN135407 OX1_32_D03.g1_A002 Oxidatively-stres... 60 6e-007
gb|CL170087.1|CL170087 104_370_10813531_116_31789_235 Sorgh... 58 2e-006
gb|CW302656.1|CW302656 104_786_11464832_148_35669_018 Sorgh... 58 2e-006
gb|CW372294.1|CW372294 fsbb001f048c08f0 Sorghum methylation... 58 2e-006
gb|CW378066.1|CW378066 fsbb001f056k18f0 Sorghum methylation... 58 2e-006
gb|CW489948.1|CW489948 fsbb001f275c14k0 Sorghum methylation... 58 2e-006
gb|CW061066.1|CW061066 104_304_10520200_114_30143 Sorghum m... 54 3e-005
gb|CW093595.1|CW093595 104_456_10999867_148_37470_068 Sorgh... 54 3e-005
gb|CW161335.1|CW161335 104_568_11150361_148_36430_043 Sorgh... 54 3e-005
gb|CW462985.1|CW462985 fsbb001f211f24f0 Sorghum methylation... 54 3e-005
gb|BZ627051.1|BZ627051 ih50a03.b1 WGS-SbicolorF (DH5a methy... 52 1e-004
gb|CL154141.1|CL154141 104_339_10781190_116_31372_054 Sorgh... 52 1e-004
gb|CW093915.1|CW093915 104_457_11000039_148_37474_092 Sorgh... 52 1e-004
gb|CW128544.1|CW128544 104_510_11114063_148_34754_094 Sorgh... 52 1e-004
gb|CW166689.1|CW166689 104_575_11153189_116_36837_021 Sorgh... 52 1e-004
gb|CW320373.1|CW320373 104_813_11474980_148_35895_010 Sorgh... 52 1e-004
gb|CW502569.1|CW502569 fsbb001f298p16f0 Sorghum methylation... 50 5e-004
gb|CW165612.1|CW165612 104_574_11152600_116_36481_064 Sorgh... 48 0.002
gb|CW177086.1|CW177086 104_590_11158834_148_36596_043 Sorgh... 48 0.002
gb|CW206089.1|CW206089 104_634_11187411_148_36952_004 Sorgh... 48 0.002
gb|CW249262.1|CW249262 104_711_11222752_116_35042_064 Sorgh... 48 0.002
gb|CW249263.1|CW249263 104_711_11222752_148_35046_064 Sorgh... 48 0.002
gb|CW465659.1|CW465659 fsbb001f216i10f0 Sorghum methylation... 48 0.002
gb|CW183397.1|CW183397 104_599_11164595_148_36676_044 Sorgh... 46 0.008
gb|BZ627383.1|BZ627383 ih52b03.g1 WGS-SbicolorF (DH5a methy... 42 0.13
gb|CL173100.1|CL173100 104_376_10890649_116_31795_169 Sorgh... 42 0.13
gb|CL173101.1|CL173101 104_376_10890649_148_31794_169 Sorgh... 42 0.13
>gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 407
Score = 611 bits (308), Expect = e-173
Identities = 347/360 (96%)
Strand = Plus / Plus
Query: 211 catggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcac 270
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 44 catggggaggggacgagttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 103
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 330
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 104 cttctccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 163
Query: 331 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgc 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgc 223
Query: 391 cggcataacaaaaactttagaaaggtaccaacattgctgctacaatgctcaagattccaa 450
||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 224 cggcataactaaaacactagaaaggtatcaacattgctgctacaacgctcaagattccaa 283
Query: 451 tggcgcactctctgaaactcagagctggtaccaggaaatgtcaaaactgagggcaaaatt 510
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tggtgcactctctgaaactcagagctggtaccaggaaatgtcaaaactgagggcaaaatt 343
Query: 511 cgaggccttgcagcgcactcagaggcacttgcttggggaggaacttggcccactgagtgt 570
|| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 344 tgaagccttgcagcgcactcagaggcacttgctcggggaggaccttggcccactgagtgt 403
>gb|BG049032.1|BG049032 OV1_22_D05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 493
Score = 555 bits (280), Expect = e-156
Identities = 407/446 (91%), Gaps = 15/446 (3%)
Strand = Plus / Plus
Query: 572 aaggagttgcagcagctagagaaacagctcgaatgtgctttgtcacaggcaagacagaga 631
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4 aaggaattgcagcagctagagaaacagctagaatgtgctttgtcacaggcaagacagaga 63
Query: 632 aagacacaacttatgatggagcaagtggaagagctccgcagaaaggagcgacacctggga 691
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 64 aagacacaacttatgatggagcaagtggaagagcttcgcagaaaggagcgtcacctggga 123
Query: 692 gaaatgaacaggcaactcaaacacaagcttgaagctgaaggttgtagcaactacagaacc 751
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 124 gaaatgaacaggcaactcaaacacaagcttgaagctgaaggttctagcaactacagaacc 183
Query: 752 ctgcagcat---gcagcctggccagctcccggcagcaccatggtggagcatgacggcgcc 808
|||||||| || |||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 184 ttgcagcatgccgccgcctggccagctcccggcggcaccatcgtggagcatgacggcgcc 243
Query: 809 acctatcatgtgcatccaacaactgctcaatcggttgcaatggactgtgaacccactctg 868
|| |||||||| |||| || ||||||| || ||||| || ||||||||||||||||||
Sbjct: 244 acgtatcatgttcatc---cacctgctcactcagttgctatagactgtgaacccactctg 300
Query: 869 caaatcgggtaccctcctcatcaccagtttctgccttccg---aggcagccaataatatc 925
||||| |||||| ||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 301 caaattgggtac---cctcatcaccagtttctgccttctgatcaggcagccaataatatc 357
Query: 926 ccaaggagcccccctggaggcgagaacaacttcatgctgggatgggttctttgagttgct 985
||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 358 ccaaggaacgcccccggaggcgagaacaacttcatgctgggatgggttctttgagttgtt 417
Query: 986 ctgttaatcatccatccatcagatgg 1011
|| | | |||||||||||||||||
Sbjct: 418 ctctca---atccatccatcagatgg 440
>gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 682
Score = 295 bits (149), Expect = 5e-078
Identities = 173/181 (95%)
Strand = Plus / Minus
Query: 209 gccatggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtc 268
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 554 gccatggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtc 495
Query: 269 accttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgc 328
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 494 accttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgc 435
Query: 329 gacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 434 gacgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 375
Query: 389 g 389
|
Sbjct: 374 g 374
>gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 712
Score = 295 bits (149), Expect = 5e-078
Identities = 173/181 (95%)
Strand = Plus / Minus
Query: 209 gccatggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtc 268
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 554 gccatggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtc 495
Query: 269 accttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgc 328
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 494 accttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgc 435
Query: 329 gacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 434 gacgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 375
Query: 389 g 389
|
Sbjct: 374 g 374
>gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488020, DNA
sequence
Length = 575
Score = 295 bits (149), Expect = 5e-078
Identities = 173/181 (95%)
Strand = Plus / Minus
Query: 209 gccatggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtc 268
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 185 gccatggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtc 126
Query: 269 accttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgc 328
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 125 accttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgc 66
Query: 329 gacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 65 gacgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 6
Query: 389 g 389
|
Sbjct: 5 g 5
>gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 440
Score = 295 bits (149), Expect = 5e-078
Identities = 173/181 (95%)
Strand = Plus / Plus
Query: 209 gccatggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtc 268
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 183 gccatggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtc 242
Query: 269 accttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgc 328
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 243 accttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgc 302
Query: 329 gacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 303 gacgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 362
Query: 389 g 389
|
Sbjct: 363 g 363
>gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 509
Score = 295 bits (149), Expect = 5e-078
Identities = 173/181 (95%)
Strand = Plus / Plus
Query: 209 gccatggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtc 268
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 180 gccatggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtc 239
Query: 269 accttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgc 328
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 240 accttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgc 299
Query: 329 gacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 300 gacgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 359
Query: 389 g 389
|
Sbjct: 360 g 360
>gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription factor SbMADS1 mRNA,
complete cds
Length = 1055
Score = 295 bits (149), Expect = 5e-078
Identities = 173/181 (95%)
Strand = Plus / Plus
Query: 209 gccatggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtc 268
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 43 gccatggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtc 102
Query: 269 accttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgc 328
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 103 accttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgc 162
Query: 329 gacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 163 gacgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 222
Query: 389 g 389
|
Sbjct: 223 g 223
>gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 697
Score = 293 bits (148), Expect = 2e-077
Identities = 166/172 (96%)
Strand = Plus / Minus
Query: 211 catggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcac 270
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 393
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 330
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 392 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 333
Query: 331 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttc 382
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 332 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 281
>gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 716
Score = 293 bits (148), Expect = 2e-077
Identities = 166/172 (96%)
Strand = Plus / Plus
Query: 211 catggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcac 270
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 524
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 330
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 525 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 584
Query: 331 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttc 382
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 585 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 636
>gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i06, DNA
sequence
Length = 725
Score = 293 bits (148), Expect = 2e-077
Identities = 166/172 (96%)
Strand = Plus / Minus
Query: 211 catggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcac 270
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 646
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 330
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 645 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 586
Query: 331 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttc 382
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 585 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 534
>gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 561
Score = 293 bits (148), Expect = 2e-077
Identities = 166/172 (96%)
Strand = Plus / Plus
Query: 211 catggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcac 270
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 101
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 330
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 102 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 161
Query: 331 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttc 382
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 162 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 213
>gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 377
Score = 293 bits (148), Expect = 2e-077
Identities = 166/172 (96%)
Strand = Plus / Plus
Query: 211 catggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcac 270
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 221
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 330
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 222 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 281
Query: 331 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttc 382
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 282 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 333
>gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 293 bits (148), Expect = 2e-077
Identities = 166/172 (96%)
Strand = Plus / Plus
Query: 211 catggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcac 270
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 217
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 330
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 218 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 277
Query: 331 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttc 382
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 278 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 329
>gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 548
Score = 285 bits (144), Expect = 5e-075
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 211 catggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcac 270
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 101
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 330
|||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 102 cttcgccaagcgccgcaacggcctgctcaagaaagcgtacgagctctccgtgctctgcga 161
Query: 331 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttc 382
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 162 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 213
>gb|CW293027.1|CW293027 104_773_11414425_148_35591_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414425, DNA
sequence
Length = 404
Score = 228 bits (115), Expect = 1e-057
Identities = 166/183 (90%)
Strand = Plus / Minus
Query: 211 catggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcac 270
|||||||||||| ||||||||| | |||||||||||||||||||||| || ||||||||
Sbjct: 256 catggggaggggacgagttgaggtgaagcggatcgagaacaagatcaggcggcaggtcac 197
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 330
||||||||| ||||||||||| ||||||||||||| ||||||||||||| || | ||
Sbjct: 196 gttctccaagggccgcaacggcatgctcaagaaggcgtacgagctctccggagtcgggga 137
Query: 331 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgc 390
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 136 cgccgaggtcgcgctcatcatcttctccagccgcggcaagctgtacgaggtcggcagcgc 77
Query: 391 cgg 393
|||
Sbjct: 76 cgg 74
>gb|CW407708.1|CW407708 fsbb001f101e21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101e21, DNA
sequence
Length = 732
Score = 226 bits (114), Expect = 4e-057
Identities = 117/118 (99%)
Strand = Plus / Minus
Query: 276 ccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccg 335
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 732 ccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcgacgccg 673
Query: 336 aggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgccgg 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgccgg 615
>gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f062a07, DNA
sequence
Length = 270
Score = 220 bits (111), Expect = 3e-055
Identities = 162/179 (90%)
Strand = Plus / Minus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| | || ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 237 atggggaggggcagggtggagctgaaacggatcgagaacaagatcaaccgccaggtgacc 178
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
|| |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 177 ttgtccaagcgtcgcaatggcctcctcaagaaggcctacgagctctccgttctctgcggc 118
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgc 390
|||||||| ||||||||| ||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 117 gccgaggtggcgctcatcgtcttctccagccgtggcaagctctacgagttaggcagcgc 59
>gb|CW210331.1|CW210331 104_640_11189738_116_37000_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189738, DNA
sequence
Length = 640
Score = 198 bits (100), Expect = 9e-049
Identities = 118/124 (95%)
Strand = Plus / Minus
Query: 209 gccatggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtc 268
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 124 gccatggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtc 65
Query: 269 accttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgc 328
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 64 accttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgc 5
Query: 329 gacg 332
||||
Sbjct: 4 gacg 1
>gb|BF657151.1|BF657151 OV2_21_D05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 301
Score = 194 bits (98), Expect = 1e-047
Identities = 116/122 (95%)
Strand = Plus / Plus
Query: 209 gccatggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtc 268
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 180 gccatggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtc 239
Query: 269 accttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgc 328
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 240 accttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgc 299
Query: 329 ga 330
||
Sbjct: 300 ga 301
>gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226403, DNA
sequence
Length = 572
Score = 190 bits (96), Expect = 2e-046
Identities = 138/152 (90%)
Strand = Plus / Plus
Query: 229 tgagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaa 288
|||| ||||||| |||||||||| || |||| | ||||| ||||||| ||||||||||||
Sbjct: 122 tgagatcaagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaa 181
Query: 289 cggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcat 348
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 241
Query: 349 catcttctccagccgcggcaagctctacgagt 380
| ||||||||||||||||| ||||||||||
Sbjct: 242 cgtcttctccagccgcggccgcctctacgagt 273
>gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 190 bits (96), Expect = 2e-046
Identities = 138/152 (90%)
Strand = Plus / Plus
Query: 229 tgagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaa 288
|||| ||||||| |||||||||| || |||| | ||||| ||||||| ||||||||||||
Sbjct: 305 tgagatcaagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaa 364
Query: 289 cggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcat 348
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 424
Query: 349 catcttctccagccgcggcaagctctacgagt 380
| ||||||||||||||||| ||||||||||
Sbjct: 425 cgtcttctccagccgcggccgcctctacgagt 456
>gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 569
Score = 190 bits (96), Expect = 2e-046
Identities = 138/152 (90%)
Strand = Plus / Plus
Query: 229 tgagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaa 288
|||| ||||||| |||||||||| || |||| | ||||| ||||||| ||||||||||||
Sbjct: 302 tgagatcaagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaa 361
Query: 289 cggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcat 348
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 421
Query: 349 catcttctccagccgcggcaagctctacgagt 380
| ||||||||||||||||| ||||||||||
Sbjct: 422 cgtcttctccagccgcggccgcctctacgagt 453
>gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 190 bits (96), Expect = 2e-046
Identities = 138/152 (90%)
Strand = Plus / Plus
Query: 229 tgagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaa 288
|||| ||||||| |||||||||| || |||| | ||||| ||||||| ||||||||||||
Sbjct: 302 tgagatcaagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaa 361
Query: 289 cggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcat 348
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 421
Query: 349 catcttctccagccgcggcaagctctacgagt 380
| ||||||||||||||||| ||||||||||
Sbjct: 422 cgtcttctccagccgcggccgcctctacgagt 453
>gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 535
Score = 190 bits (96), Expect = 2e-046
Identities = 138/152 (90%)
Strand = Plus / Plus
Query: 229 tgagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaa 288
|||| ||||||| |||||||||| || |||| | ||||| ||||||| ||||||||||||
Sbjct: 307 tgagatcaagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaa 366
Query: 289 cggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcat 348
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 426
Query: 349 catcttctccagccgcggcaagctctacgagt 380
| ||||||||||||||||| ||||||||||
Sbjct: 427 cgtcttctccagccgcggccgcctctacgagt 458
>gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481239, DNA
sequence
Length = 584
Score = 188 bits (95), Expect = 9e-046
Identities = 146/163 (89%)
Strand = Plus / Minus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| |||||||| |||||| || | ||| ||||| |||||||||||||||||||||
Sbjct: 423 gagctgaagcggatagagaacgcgacgagccggcaggtgaccttctccaagcgccgcaac 364
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 363 gggctgctcaagaaggcctacgagctctccgtgctctgcgacgctgaggtcgggctcatc 304
Query: 350 atcttctccagccgcggcaagctctacgagttcggcagcgccg 392
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 303 gtcttctccccgcgcggcaagctctacgagttcgccagcgccg 261
>gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f098e17, DNA
sequence
Length = 631
Score = 188 bits (95), Expect = 9e-046
Identities = 146/163 (89%)
Strand = Plus / Minus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| |||||||| |||||| || | ||| ||||| |||||||||||||||||||||
Sbjct: 340 gagctgaagcggatagagaacgcgacgagccggcaggtgaccttctccaagcgccgcaac 281
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 280 gggctgctcaagaaggcctacgagctctccgtgctctgcgacgctgaggtcgggctcatc 221
Query: 350 atcttctccagccgcggcaagctctacgagttcggcagcgccg 392
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 220 gtcttctccccgcgcggcaagctctacgagttcgccagcgccg 178
>gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 421
Score = 188 bits (95), Expect = 9e-046
Identities = 146/163 (89%)
Strand = Plus / Plus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| |||||||| |||||| || | ||| ||||| |||||||||||||||||||||
Sbjct: 181 gagctgaagcggatagagaacgcgacgagccggcaggtgaccttctccaagcgccgcaac 240
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 241 gggctgctcaagaaggcctacgagctctccgtgctctgcgacgctgaggtcgggctcatc 300
Query: 350 atcttctccagccgcggcaagctctacgagttcggcagcgccg 392
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 301 gtcttctccccgcgcggcaagctctacgagttcgccagcgccg 343
>gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_2_E10_A002 5', mRNA sequence
Length = 447
Score = 188 bits (95), Expect = 9e-046
Identities = 146/163 (89%)
Strand = Plus / Plus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| |||||||| |||||| || | ||| ||||| |||||||||||||||||||||
Sbjct: 218 gagctgaagcggatagagaacgcgacgagccggcaggtgaccttctccaagcgccgcaac 277
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 278 gggctgctcaagaaggcctacgagctctccgtgctctgcgacgctgaggtcgggctcatc 337
Query: 350 atcttctccagccgcggcaagctctacgagttcggcagcgccg 392
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 338 gtcttctccccgcgcggcaagctctacgagttcgccagcgccg 380
>gb|CW214921.1|CW214921 104_647_11194268_116_37464_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194268, DNA
sequence
Length = 674
Score = 184 bits (93), Expect = 1e-044
Identities = 99/101 (98%)
Strand = Plus / Plus
Query: 282 gccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcg 341
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcg 60
Query: 342 cgctcatcatcttctccagccgcggcaagctctacgagttc 382
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 61 cgctcatcatcttctccaaccgcggcaagctctacgagttc 101
>gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809549, DNA
sequence
Length = 690
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Minus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 594 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 535
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 534 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 475
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 474 tctccagccgcggccgcctctacgagt 448
>gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 605
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 370 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 429
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 430 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 489
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 490 tctccagccgcggccgcctctacgagt 516
>gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 620
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Minus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 304 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 245
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 244 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 185
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 184 tctccagccgcggccgcctctacgagt 158
>gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 611
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Minus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 447 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 388
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 387 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 328
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 327 tctccagccgcggccgcctctacgagt 301
>gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 654
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 354 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 413
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 414 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 473
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 474 tctccagccgcggccgcctctacgagt 500
>gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 530
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 149 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 208
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 209 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 268
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 269 tctccagccgcggccgcctctacgagt 295
>gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 515
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 149 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 208
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 209 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 268
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 269 tctccagccgcggccgcctctacgagt 295
>gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 551
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 247 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 306
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 307 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 366
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 367 tctccagccgcggccgcctctacgagt 393
>gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 474
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 91 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 150
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 151 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 210
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 211 tctccagccgcggccgcctctacgagt 237
>gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 434
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 185 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 244
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 245 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 304
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 305 tctccagccgcggccgcctctacgagt 331
>gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 175 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 234
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 235 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 294
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 295 tctccagccgcggccgcctctacgagt 321
>gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 193 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 252
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 253 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 312
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 313 tctccagccgcggccgcctctacgagt 339
>gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 436
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 195 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 254
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 255 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 314
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 315 tctccagccgcggccgcctctacgagt 341
>gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 507
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||||| |||||||||| | ||||| ||||||||||||| |||||||||||||||||
Sbjct: 151 tcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcc 210
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 211 tcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtct 270
Query: 354 tctccagccgcggcaagctctacgagt 380
|||||||||||||| ||||||||||
Sbjct: 271 tctccagccgcggccgcctctacgagt 297
>gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f209d06, DNA
sequence
Length = 779
Score = 178 bits (90), Expect = 9e-043
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| |||||||||||||||||||||| ||| ||||| || ||| |||||||||| |||
Sbjct: 486 gagctgaagcggatcgagaacaagatcagccggcaggtgacgttcgccaagcgccggaac 427
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|| |||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 426 gggctgctcaagaaggcgtacgagctgtcggtgctctgcgacgccgaggtcgccctcatc 367
Query: 350 atcttctccagccgcggc 367
||||||||||||||||||
Sbjct: 366 atcttctccagccgcggc 349
>gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f240o12, DNA
sequence
Length = 722
Score = 178 bits (90), Expect = 9e-043
Identities = 135/150 (90%)
Strand = Plus / Minus
Query: 231 agctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacg 290
|||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 326 agctgaagcggatcgagaacaagatcaaccgccaggtgaccttctccaagcgccgctcgg 267
Query: 291 gcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatca 350
| |||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||||
Sbjct: 266 ggctgctcaagaaggcgcacgagatctccgtgctctgcgatgccgaggtcgcgcttatca 207
Query: 351 tcttctccagccgcggcaagctctacgagt 380
||||||||| | ||||||||||||||||
Sbjct: 206 tcttctccaccaagggcaagctctacgagt 177
>gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155545, DNA
sequence
Length = 655
Score = 170 bits (86), Expect = 2e-040
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 236 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 295
|||||||| |||||| || || |||||||||||||||||||||||||||||||||||||
Sbjct: 619 aagcggatagagaacgcgaccagccgccaggtcaccttctccaagcgccgcaacggcctg 560
Query: 296 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 355
||||||||||| | |||||||||||| |||||||||||||||||||||||| || |||||
Sbjct: 559 ctcaagaaggcgttcgagctctccgtcctctgcgacgccgaggtcgcgctcgtcgtcttc 500
Query: 356 tccagccgcggcaagctctacgagttcggcagcg 389
|| ||||||||||||| ||| |||| |||||
Sbjct: 499 tctccgcgcggcaagctcttcgaattcgccagcg 466
>gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407834, DNA
sequence
Length = 575
Score = 170 bits (86), Expect = 2e-040
Identities = 113/122 (92%)
Strand = Plus / Minus
Query: 237 agcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctgc 296
||||||||||||||||||||| ||| ||||| |||||| |||||||||| ||||||||||
Sbjct: 250 agcggatcgagaacaagatcagccggcaggtgaccttcgccaagcgccggaacggcctgc 191
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||||||||||||||| | |||||||||||||||||||||||| || ||||||
Sbjct: 190 tcaagaaggcctacgagctctccatcctctgcgacgccgaggtcgcgctcgtcctcttct 131
Query: 357 cc 358
||
Sbjct: 130 cc 129
>gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461713, DNA
sequence
Length = 684
Score = 170 bits (86), Expect = 2e-040
Identities = 113/122 (92%)
Strand = Plus / Plus
Query: 237 agcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctgc 296
||||||||||||||||||||| ||| ||||| |||||| |||||||||| ||||||||||
Sbjct: 191 agcggatcgagaacaagatcagccggcaggtgaccttcgccaagcgccggaacggcctgc 250
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||||||||||||||| | |||||||||||||||||||||||| || ||||||
Sbjct: 251 tcaagaaggcctacgagctctccatcctctgcgacgccgaggtcgcgctcgtcctcttct 310
Query: 357 cc 358
||
Sbjct: 311 cc 312
>gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like protein 1, phytochelatin
synthetase-like protein 2, and cytochrome b5 (Cyb5) genes,
complete cds; and MADS box protein AGLG1 (Aglg1) gene,
partial cds
Length = 23102
Score = 170 bits (86), Expect = 2e-040
Identities = 113/122 (92%)
Strand = Plus / Plus
Query: 237 agcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctgc 296
||||||||||||||||||||| ||| ||||| |||||| |||||||||| ||||||||||
Sbjct: 21632 agcggatcgagaacaagatcagccggcaggtgaccttcgccaagcgccggaacggcctgc 21691
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||||||||||||||| | |||||||||||||||||||||||| || ||||||
Sbjct: 21692 tcaagaaggcctacgagctctccatcctctgcgacgccgaggtcgcgctcgtcctcttct 21751
Query: 357 cc 358
||
Sbjct: 21752 cc 21753
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 380,770
Number of Sequences: 832831
Number of extensions: 380770
Number of successful extensions: 107876
Number of sequences better than 0.5: 207
Number of HSP's better than 0.5 without gapping: 201
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 107553
Number of HSP's gapped (non-prelim): 306
length of query: 1331
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1311
effective length of database: 474,703,049
effective search space: 622335697239
effective search space used: 622335697239
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)