BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2643622.2.1
(1067 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW217293.1|CW217293 104_650_11195580_116_37132_040 Sorgh... 846 0.0
gb|BG102350.1|BG102350 RHIZ2_22_F11.b1_A003 Rhizome2 (RHIZ2... 797 0.0
gb|BG101809.1|BG101809 RHIZ2_22_F11.g1_A003 Rhizome2 (RHIZ2... 771 0.0
gb|BG053297.1|BG053297 RHIZ2_25_F08.b1_A003 Rhizome2 (RHIZ2... 749 0.0
gb|BG103168.1|BG103168 RHIZ2_19_A04.g1_A003 Rhizome2 (RHIZ2... 668 0.0
gb|BF705056.1|BF705056 RHIZ2_1_H06.g1_A003 Rhizome2 (RHIZ2)... 609 e-172
gb|CW146760.1|CW146760 104_539_11139160_116_34991_052 Sorgh... 579 e-163
gb|BF480873.1|BF480873 FM1_14_D03.g1_A003 Floral-Induced Me... 484 e-135
gb|BF480823.1|BF480823 FM1_14_D03.b1_A003 Floral-Induced Me... 474 e-132
gb|AF029856.1|AF029856 Sorghum bicolor cytochrome P450 CYP9... 454 e-126
gb|BG052600.1|BG052600 RHIZ2_25_F08.g1_A003 Rhizome2 (RHIZ2... 446 e-123
gb|CX611829.1|CX611829 ANR1_27_A08.b1_A002 Anaerobic roots ... 424 e-117
gb|BG051632.1|BG051632 FM1_59_B10.g1_A003 Floral-Induced Me... 420 e-115
gb|CN124702.1|CN124702 RHOH1_6_H08.b1_A002 Acid- and alkali... 416 e-114
gb|CW217294.1|CW217294 104_650_11195580_148_37131_040 Sorgh... 412 e-113
gb|BF705139.1|BF705139 RHIZ2_1_H06.b1_A003 Rhizome2 (RHIZ2)... 392 e-107
gb|CW121754.1|CW121754 104_499_11110079_148_34659_084 Sorgh... 389 e-106
gb|CX610986.1|CX610986 ANR1_22_B03.b1_A002 Anaerobic roots ... 359 3e-097
gb|CX606441.1|CX606441 ANR1_3_C01.b1_A002 Anaerobic roots S... 355 5e-096
gb|BE357542.1|BE357542 DG1_21_G06.b1_A002 Dark Grown 1 (DG1... 349 3e-094
gb|CW228065.1|CW228065 104_667_11206156_116_37246_004 Sorgh... 343 2e-092
gb|CX609323.1|CX609323 ANR1_12_B01.b1_A002 Anaerobic roots ... 329 3e-088
gb|CD226062.1|CD226062 CCC1_43_G11.b1_A007 Callus culture/c... 321 7e-086
gb|CX618899.1|CX618899 GABR1_42_G11.b1_A002 GA- or brassino... 285 4e-075
gb|BE357675.1|BE357675 DG1_21_G06.g1_A002 Dark Grown 1 (DG1... 281 6e-074
gb|BI074326.1|BI074326 IP1_14_H01.g1_A002 Immature pannicle... 281 6e-074
gb|CD207935.1|CD207935 HS1_36_D10.b1_A012 Heat-shocked seed... 274 2e-071
gb|CX611894.1|CX611894 ANR1_27_G09.b1_A002 Anaerobic roots ... 262 6e-068
gb|CD209953.1|CD209953 HS1_56_H05.b1_A012 Heat-shocked seed... 252 6e-065
gb|CD230597.1|CD230597 SS1_47_C04.b1_A012 Salt-stressed see... 252 6e-065
gb|CD208941.1|CD208941 HS1_45_F08.b1_A012 Heat-shocked seed... 250 2e-064
gb|CF073719.1|CF073719 FE1_11_F09.g1_A002 Iron-deficient se... 214 1e-053
gb|AI724143.1|AI724143 RHIZ1_7_D04.y2_A001 Rhizome1 (RHIZ1)... 208 8e-052
gb|CW110281.1|CW110281 104_483_11103608_148_34522_032 Sorgh... 202 5e-050
gb|BG102616.1|BG102616 RHIZ2_35_B12.g1_A003 Rhizome2 (RHIZ2... 198 7e-049
gb|BG158679.1|BG158679 RHIZ2_43_G05.g1_A003 Rhizome2 (RHIZ2... 196 3e-048
gb|AW284271.1|AW284271 LG1_268_H07.g1_A002 Light Grown 1 (L... 178 7e-043
gb|CX608572.1|CX608572 ANR1_39_H09.b1_A002 Anaerobic roots ... 176 3e-042
gb|BG103340.1|BG103340 RHIZ2_19_A04.b1_A003 Rhizome2 (RHIZ2... 163 4e-038
gb|CX608731.1|CX608731 ANR1_40_H07.b1_A002 Anaerobic roots ... 163 4e-038
gb|BG465716.1|BG465716 RHIZ2_47_G08.b1_A003 Rhizome2 (RHIZ2... 143 4e-032
gb|CF071700.1|CF071700 FE1_18_C03.b1_A002 Iron-deficient se... 111 1e-022
gb|CW303796.1|CW303796 104_788_11465430_148_35696_023 Sorgh... 78 2e-012
gb|CW385551.1|CW385551 fsbb001f069b07f0 Sorghum methylation... 78 2e-012
gb|CW179942.1|CW179942 104_594_11160375_148_36632_060 Sorgh... 64 3e-008
gb|BG048287.1|BG048287 OV1_16_C09.g1_A002 Ovary 1 (OV1) Sor... 64 3e-008
gb|BM317850.1|BM317850 OV1_16_C09.b9_A002 Ovary 1 (OV1) Sor... 64 3e-008
gb|CF481729.1|CF481729 POL1_73_E07.g1_A002 Pollen Sorghum b... 64 3e-008
gb|BZ423254.1|BZ423254 id47b10.g1 WGS-SbicolorF (DH5a methy... 62 1e-007
gb|CL703376.2|CL703376 SP__Ba0095M14.r SP__Ba Sorghum propi... 62 1e-007
gb|CW338725.1|CW338725 104_839_11484895_116_36134_030 Sorgh... 60 4e-007
gb|CW338726.1|CW338726 104_839_11484895_148_36135_030 Sorgh... 60 4e-007
gb|CD425621.1|CD425621 SA1_13_G02.b1_A002 Salicylic acid-tr... 60 4e-007
gb|CD425931.1|CD425931 SA1_15_G02.b1_A002 Salicylic acid-tr... 60 4e-007
gb|CD427687.1|CD427687 SA1_38_D02.b1_A002 Salicylic acid-tr... 60 4e-007
gb|CW235177.1|CW235177 104_690_11214843_148_37413_010 Sorgh... 58 2e-006
gb|CW032003.1|CW032003 104_260_10501126_114_30365 Sorghum m... 54 3e-005
gb|CW159482.1|CW159482 104_565_11149381_116_36407_053 Sorgh... 54 3e-005
gb|CW396920.1|CW396920 fsbb001f085j10k0 Sorghum methylation... 54 3e-005
gb|BE360532.1|BE360532 DG1_64_F09.b1_A002 Dark Grown 1 (DG1... 54 3e-005
gb|CW110280.1|CW110280 104_483_11103608_116_34518_032 Sorgh... 52 1e-004
gb|CL177579.1|CL177579 104_384_10893926_148_31915_374 Sorgh... 50 4e-004
gb|CW140427.1|CW140427 104_531_11135775_116_34924_064 Sorgh... 50 4e-004
gb|CW140428.1|CW140428 104_531_11135775_148_34920_064 Sorgh... 50 4e-004
gb|CW144166.1|CW144166 104_536_11137798_148_34961_091 Sorgh... 50 4e-004
gb|CW162758.1|CW162758 104_570_11151106_148_36451_045 Sorgh... 50 4e-004
gb|CW209239.1|CW209239 104_639_11189127_116_36989_062 Sorgh... 50 4e-004
gb|CW209240.1|CW209240 104_639_11189127_148_36990_062 Sorgh... 50 4e-004
gb|CW214722.1|CW214722 104_646_11194163_116_37050_036 Sorgh... 50 4e-004
gb|CW216764.1|CW216764 104_649_11195288_148_37123_020 Sorgh... 50 4e-004
gb|CW292193.1|CW292193 104_772_11413955_116_35579_046 Sorgh... 50 4e-004
gb|CW447265.1|CW447265 fsbb001f180e24k0 Sorghum methylation... 50 4e-004
gb|CW458027.1|CW458027 fsbb001f204b19k0 Sorghum methylation... 50 4e-004
gb|CW460451.1|CW460451 fsbb001f207k13f0 Sorghum methylation... 50 4e-004
gb|CD462359.1|CD462359 ETH1_37_C04.b1_A002 Ethylene-treated... 50 4e-004
gb|CF071490.1|CF071490 FE1_13_B12.g1_A002 Iron-deficient se... 50 4e-004
gb|CF433970.1|CF433970 NIT1_31_C10.b1_A002 Nitrogen-deficie... 50 4e-004
gb|CL157598.1|CL157598 104_345_10783700_114_31477_260 Sorgh... 48 0.002
gb|CL157599.1|CL157599 104_345_10783700_116_31478_260 Sorgh... 48 0.002
gb|CW026602.1|CW026602 104_252_10498040_116_30521 Sorghum m... 48 0.002
gb|CW059885.1|CW059885 104_303_10519564_5_30087 Sorghum met... 48 0.002
gb|CW071224.1|CW071224 104_323_10591430_116_30545 Sorghum m... 48 0.002
gb|CW071344.1|CW071344 104_323_10591480_114_30474 Sorghum m... 48 0.002
gb|CW071345.1|CW071345 104_323_10591480_116_30439 Sorghum m... 48 0.002
gb|CW115513.1|CW115513 104_490_11106601_116_34592_003 Sorgh... 48 0.002
gb|CW115514.1|CW115514 104_490_11106601_148_34588_003 Sorgh... 48 0.002
gb|CW132069.1|CW132069 104_515_11116013_148_34794_027 Sorgh... 48 0.002
gb|CW179941.1|CW179941 104_594_11160375_116_36636_060 Sorgh... 48 0.002
gb|CW204073.1|CW204073 104_631_11186346_116_37095_065 Sorgh... 48 0.002
gb|CW235176.1|CW235176 104_690_11214843_116_37409_010 Sorgh... 48 0.002
gb|CW257988.1|CW257988 104_723_11227632_148_35157_086 Sorgh... 48 0.002
gb|CW258921.1|CW258921 104_725_11228142_116_35185_031 Sorgh... 48 0.002
gb|CW294672.1|CW294672 104_775_11415310_116_36233_085 Sorgh... 48 0.002
gb|CW466105.1|CW466105 fsbb001f217d04k0 Sorghum methylation... 48 0.002
gb|CW485366.1|CW485366 fsbb001f248b06f0 Sorghum methylation... 48 0.002
gb|CW485367.1|CW485367 fsbb001f248b06k0 Sorghum methylation... 48 0.002
gb|AW563937.1|AW563937 LG1_275_H04.b1_A002 Light Grown 1 (L... 48 0.002
gb|AW671851.1|AW671851 LG1_352_C06.b1_A002 Light Grown 1 (L... 48 0.002
gb|BE356894.1|BE356894 DG1_145_C11.b1_A002 Dark Grown 1 (DG... 48 0.002
gb|BE361502.1|BE361502 DG1_81_C06.b1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE362012.1|BE362012 DG1_83_G03.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE593028.1|BE593028 WS1_93_D11.b1_A002 Water-stressed 1 ... 48 0.002
gb|BF587316.1|BF587316 FM1_34_H11.b1_A003 Floral-Induced Me... 48 0.002
gb|BF705416.1|BF705416 RHIZ2_3_F12.b1_A003 Rhizome2 (RHIZ2)... 48 0.002
gb|BG158914.1|BG158914 RHIZ2_42_C12.b1_A003 Rhizome2 (RHIZ2... 48 0.002
gb|BG159064.1|BG159064 RHIZ2_17_D02.b1_A003 Rhizome2 (RHIZ2... 48 0.002
gb|BG560183.1|BG560183 RHIZ2_71_C11.b1_A003 Rhizome2 (RHIZ2... 48 0.002
gb|BI140869.1|BI140869 IP1_40_B04.b1_A002 Immature pannicle... 48 0.002
gb|CD206203.1|CD206203 HS1_21_A02.b1_A012 Heat-shocked seed... 48 0.002
gb|CF772746.1|CF772746 DSBF1_38_H04.g1_A010 Drought-stresse... 48 0.002
gb|CN123854.1|CN123854 RHOH1_1_D11.b1_A002 Acid- and alkali... 48 0.002
gb|CN136302.1|CN136302 OX1_42_D08.b1_A002 Oxidatively-stres... 48 0.002
gb|CN137113.1|CN137113 OX1_55_F10.b1_A002 Oxidatively-stres... 48 0.002
gb|CN143955.1|CN143955 WOUND1_19_H05.b1_A002 Wounded leaves... 48 0.002
gb|CN144556.1|CN144556 WOUND1_23_D02.b1_A002 Wounded leaves... 48 0.002
gb|CN147861.1|CN147861 WOUND1_52_E11.g1_A002 Wounded leaves... 48 0.002
gb|CN151205.1|CN151205 WOUND1_74_C01.b1_A002 Wounded leaves... 48 0.002
gb|CX607513.1|CX607513 ANR1_29_D09.b1_A002 Anaerobic roots ... 48 0.002
gb|CX611521.1|CX611521 ANR1_25_D09.b1_A002 Anaerobic roots ... 48 0.002
gb|DN552341.1|DN552341 pSPR-RT-A-H2_D07_C384 pSPR Sorghum p... 48 0.002
emb|A44982.1| Sequence 1 from Patent WO9516041 48 0.002
gb|U32624.1|SBU32624 Sorghum bicolor N-hydroxylating, multi... 48 0.002
gb|BZ779857.1|BZ779857 ii35a10.g1 WGS-SbicolorF (DH5a methy... 46 0.007
gb|CW041649.1|CW041649 104_275_10506669_114_30284 Sorghum m... 46 0.007
gb|CW041650.1|CW041650 104_275_10506669_115_30285 Sorghum m... 46 0.007
gb|CW065653.1|CW065653 104_312_10523266_114_30129 Sorghum m... 46 0.007
gb|CW161466.1|CW161466 104_568_11150430_116_36436_025 Sorgh... 46 0.007
gb|CW161467.1|CW161467 104_568_11150430_148_36435_025 Sorgh... 46 0.007
gb|CW235305.1|CW235305 104_690_11214911_116_37409_088 Sorgh... 46 0.007
gb|CW235306.1|CW235306 104_690_11214911_148_37413_088 Sorgh... 46 0.007
gb|CW265515.1|CW265515 104_734_11231923_116_35257_066 Sorgh... 46 0.007
gb|CW292194.1|CW292194 104_772_11413955_148_35583_046 Sorgh... 46 0.007
gb|CW306360.1|CW306360 104_792_11466798_116_35712_031 Sorgh... 46 0.007
gb|CW350302.1|CW350302 fsbb001f011i17f0 Sorghum methylation... 46 0.007
gb|CW350421.1|CW350421 fsbb001f011l14k0 Sorghum methylation... 46 0.007
gb|CW391359.1|CW391359 fsbb001f077h10k0 Sorghum methylation... 46 0.007
gb|CW423885.1|CW423885 fsbb001f133o22k0 Sorghum methylation... 46 0.007
gb|CW455975.1|CW455975 fsbb001f201b19f0 Sorghum methylation... 46 0.007
gb|CW492912.1|CW492912 fsbb001f283h01k0 Sorghum methylation... 46 0.007
gb|CW495231.1|CW495231 fsbb001f286o11k0 Sorghum methylation... 46 0.007
gb|CW500161.1|CW500161 fsbb001f295f07k0 Sorghum methylation... 46 0.007
gb|CW500198.1|CW500198 fsbb001f295g07k0 Sorghum methylation... 46 0.007
gb|AW924516.1|AW924516 WS1_70_D06.b1_A002 Water-stressed 1 ... 46 0.007
gb|BE357213.1|BE357213 DG1_147_D08.g1_A002 Dark Grown 1 (DG... 46 0.007
gb|BE357224.1|BE357224 DG1_147_C08.g1_A002 Dark Grown 1 (DG... 46 0.007
gb|BE357225.1|BE357225 DG1_147_C07.g1_A002 Dark Grown 1 (DG... 46 0.007
gb|BE363941.1|BE363941 PI1_10_B07.g1_A002 Pathogen induced ... 46 0.007
gb|CL152904.1|CL152904 104_336_10780327_114_31365_343 Sorgh... 44 0.026
gb|CL173375.1|CL173375 104_376_10890832_116_31795_352 Sorgh... 44 0.026
gb|CL187901.1|CL187901 104_403_10901215_116_32465_018 Sorgh... 44 0.026
gb|CL193520.1|CL193520 104_417_10940988_116_32279_044 Sorgh... 44 0.026
gb|CW111258.1|CW111258 104_484_11104208_116_34532_024 Sorgh... 44 0.026
gb|CW120287.1|CW120287 104_497_11109242_116_34643_005 Sorgh... 44 0.026
gb|CW181209.1|CW181209 104_596_11163377_116_36647_077 Sorgh... 44 0.026
gb|CW217269.1|CW217269 104_650_11195567_116_37133_090 Sorgh... 44 0.026
gb|CW229839.1|CW229839 104_671_11207529_148_37263_041 Sorgh... 44 0.026
gb|CW299767.1|CW299767 104_782_11463292_116_35690_002 Sorgh... 44 0.026
gb|CW304080.1|CW304080 104_788_11465588_116_35692_066 Sorgh... 44 0.026
gb|CW304081.1|CW304081 104_788_11465588_148_35696_066 Sorgh... 44 0.026
gb|CW308002.1|CW308002 104_796_11468440_116_36237_060 Sorgh... 44 0.026
gb|CW323131.1|CW323131 104_817_11476470_148_35959_027 Sorgh... 44 0.026
gb|CW327211.1|CW327211 104_822_11478626_148_35969_001 Sorgh... 44 0.026
gb|CW344414.1|CW344414 104_847_11487942_116_36200_029 Sorgh... 44 0.026
gb|CW376163.1|CW376163 fsbb001f053o11k0 Sorghum methylation... 44 0.026
gb|CW393358.1|CW393358 fsbb001f080g02k0 Sorghum methylation... 44 0.026
gb|CW404591.1|CW404591 fsbb001f096m18k0 Sorghum methylation... 44 0.026
gb|CW416553.1|CW416553 fsbb001f117c13k0 Sorghum methylation... 44 0.026
gb|CW424156.1|CW424156 fsbb001f134f17f0 Sorghum methylation... 44 0.026
gb|CW444937.1|CW444937 fsbb001f166m15k0 Sorghum methylation... 44 0.026
gb|CW449224.1|CW449224 fsbb001f183e06f0 Sorghum methylation... 44 0.026
gb|CW460407.1|CW460407 fsbb001f207j14k0 Sorghum methylation... 44 0.026
gb|CW465569.1|CW465569 fsbb001f216g11f0 Sorghum methylation... 44 0.026
gb|CW483941.1|CW483941 fsbb001f245n05k0 Sorghum methylation... 44 0.026
gb|CW495032.1|CW495032 fsbb001f286j17f0 Sorghum methylation... 44 0.026
gb|BE360873.1|BE360873 DG1_67_A09.g1_A002 Dark Grown 1 (DG1... 44 0.026
gb|CD233891.1|CD233891 SS1_5_B04.b1_A012 Salt-stressed seed... 44 0.026
gb|CD430773.1|CD430773 ETH1_5_E11.b1_A002 Ethylene-treated ... 44 0.026
gb|CF430086.1|CF430086 PH1_26_E06.b1_A002 Phosphorous-defic... 44 0.026
gb|CN138190.1|CN138190 OX1_62_F08.b1_A002 Oxidatively-stres... 44 0.026
gb|AY675075.1| Sorghum bicolor flavonoid 3'-hydroxylase mRN... 44 0.026
gb|AY675076.1| Sorghum bicolor flavonoid 3'-hydroxylase gen... 44 0.026
gb|BZ331488.1|BZ331488 hw08h04.b1 WGS-SbicolorF (JM107 adap... 42 0.10
gb|BZ347161.1|BZ347161 hw09c03.b1 WGS-SbicolorF (JM107 adap... 42 0.10
gb|CL151086.1|CL151086 104_333_10778999_114_31359_167 Sorgh... 42 0.10
gb|CL151087.1|CL151087 104_333_10778999_116_31360_167 Sorgh... 42 0.10
gb|CL153831.1|CL153831 104_338_10780984_114_31369_232 Sorgh... 42 0.10
gb|CL153832.1|CL153832 104_338_10780984_116_31370_232 Sorgh... 42 0.10
gb|CL177026.1|CL177026 104_383_10893544_148_31772_376 Sorgh... 42 0.10
gb|CW072175.1|CW072175 104_325_10592114_114_30536 Sorghum m... 42 0.10
gb|CW126872.1|CW126872 104_507_11113128_148_34729_084 Sorgh... 42 0.10
gb|CW164995.1|CW164995 104_573_11152274_116_36471_011 Sorgh... 42 0.10
gb|CW204705.1|CW204705 104_632_11186687_116_37060_084 Sorgh... 42 0.10
gb|CW281449.1|CW281449 104_757_11408184_116_35462_094 Sorgh... 42 0.10
gb|CW281450.1|CW281450 104_757_11408184_148_35458_094 Sorgh... 42 0.10
gb|CW282233.1|CW282233 104_758_11408605_116_35465_059 Sorgh... 42 0.10
gb|CW282234.1|CW282234 104_758_11408605_148_35469_059 Sorgh... 42 0.10
gb|CW328098.1|CW328098 104_824_11479113_148_35984_045 Sorgh... 42 0.10
gb|CW353556.1|CW353556 fsbb001f016f19f0 Sorghum methylation... 42 0.10
gb|CW385602.1|CW385602 fsbb001f069c08k0 Sorghum methylation... 42 0.10
gb|CW438573.1|CW438573 fsbb001f156e10f0 Sorghum methylation... 42 0.10
gb|CW476794.1|CW476794 fsbb001f233m22f0 Sorghum methylation... 42 0.10
gb|CW490044.1|CW490044 fsbb001f275e17f0 Sorghum methylation... 42 0.10
gb|CW490045.1|CW490045 fsbb001f275e17k0 Sorghum methylation... 42 0.10
gb|CW492169.1|CW492169 fsbb001f282f13f0 Sorghum methylation... 42 0.10
gb|AW922486.1|AW922486 DG1_19_B12.g1_A002 Dark Grown 1 (DG1... 42 0.10
gb|AW922782.1|AW922782 DG1_46_B07.g1_A002 Dark Grown 1 (DG1... 42 0.10
gb|AW923050.1|AW923050 DG1_48_G09.g1_A002 Dark Grown 1 (DG1... 42 0.10
gb|BE355046.1|BE355046 DG1_10_C09.g1_A002 Dark Grown 1 (DG1... 42 0.10
gb|BE358591.1|BE358591 DG1_31_H03.g1_A002 Dark Grown 1 (DG1... 42 0.10
gb|BE360988.1|BE360988 DG1_68_E06.g1_A002 Dark Grown 1 (DG1... 42 0.10
gb|BG411884.1|BG411884 OV2_39_C12.g1_A002 Ovary 2 (OV2) Sor... 42 0.10
gb|BG412221.1|BG412221 OV2_39_C12.b1_A002 Ovary 2 (OV2) Sor... 42 0.10
gb|BG356068.2|BG356068 EM1_19_H07.g1_A002 Embryo 1 (EM1) So... 42 0.10
gb|BM318754.1|BM318754 PI1_15_B11.g1_A002 Pathogen induced ... 42 0.10
gb|BM328505.1|BM328505 PIC1_30_A06.g1_A002 Pathogen-infecte... 42 0.10
gb|CB927953.1|CB927953 ABA1_35_A10.b1_A012 Abscisic acid-tr... 42 0.10
gb|CD208098.1|CD208098 HS1_31_F10.b1_A012 Heat-shocked seed... 42 0.10
gb|CD211460.1|CD211460 HS1_60_D11.b1_A012 Heat-shocked seed... 42 0.10
gb|CD213028.1|CD213028 HS1_28_D05.b1_A012 Heat-shocked seed... 42 0.10
gb|CD219666.1|CD219666 CCC1_58_F05.b1_A007 Callus culture/c... 42 0.10
gb|CD226037.1|CD226037 CCC1_43_A07.b1_A007 Callus culture/c... 42 0.10
gb|CD231691.1|CD231691 SS1_23_D03.b1_A012 Salt-stressed see... 42 0.10
gb|CD428512.1|CD428512 ETH1_27_C07.b1_A002 Ethylene-treated... 42 0.10
gb|CF429944.1|CF429944 PH1_25_E07.b1_A002 Phosphorous-defic... 42 0.10
gb|CF433418.1|CF433418 NIT1_27_E02.b1_A002 Nitrogen-deficie... 42 0.10
gb|CF761743.1|CF761743 DSAF1_80_D01.g1_A011 Drought-stresse... 42 0.10
gb|CF770506.1|CF770506 DSBF1_8_D11.b1_A010 Drought-stressed... 42 0.10
gb|CN128554.1|CN128554 RHOH1_30_F06.b1_A002 Acid- and alkal... 42 0.10
gb|CN131937.1|CN131937 OX1_3_D07.b1_A002 Oxidatively-stress... 42 0.10
gb|CN145888.1|CN145888 WOUND1_36_A12.b1_A002 Wounded leaves... 42 0.10
gb|CN145921.1|CN145921 WOUND1_36_E04.b1_A002 Wounded leaves... 42 0.10
gb|CN146237.1|CN146237 WOUND1_39_B09.b1_A002 Wounded leaves... 42 0.10
gb|CN148369.1|CN148369 WOUND1_56_A10.b1_A002 Wounded leaves... 42 0.10
gb|CN149843.1|CN149843 WOUND1_65_E07.b1_A002 Wounded leaves... 42 0.10
gb|CX607822.1|CX607822 ANR1_31_A05.b1_A002 Anaerobic roots ... 42 0.10
gb|CX607869.1|CX607869 ANR1_31_F08.b1_A002 Anaerobic roots ... 42 0.10
gb|CX608015.1|CX608015 ANR1_32_D04.b1_A002 Anaerobic roots ... 42 0.10
gb|CX608657.1|CX608657 ANR1_40_A03.b1_A002 Anaerobic roots ... 42 0.10
gb|CX609033.1|CX609033 ANR1_10_F03.b1_A002 Anaerobic roots ... 42 0.10
gb|CX609337.1|CX609337 ANR1_12_C06.b1_A002 Anaerobic roots ... 42 0.10
gb|CX609688.1|CX609688 ANR1_14_D08.b1_A002 Anaerobic roots ... 42 0.10
gb|CX611881.1|CX611881 ANR1_27_F07.b1_A002 Anaerobic roots ... 42 0.10
gb|CX611982.1|CX611982 ANR1_27_G09.g1_A002 Anaerobic roots ... 42 0.10
gb|CX613106.1|CX613106 GABR1_6_G01.b1_A002 GA- or brassinol... 42 0.10
gb|CX614757.1|CX614757 GABR1_16_D04.b1_A002 GA- or brassino... 42 0.10
gb|CX616979.1|CX616979 GABR1_31_B04.b1_A002 GA- or brassino... 42 0.10
gb|CX618551.1|CX618551 GABR1_40_F12.b1_A002 GA- or brassino... 42 0.10
gb|CX618710.1|CX618710 GABR1_41_E09.b1_A002 GA- or brassino... 42 0.10
gb|CX618716.1|CX618716 GABR1_41_F04.b1_A002 GA- or brassino... 42 0.10
gb|CX619188.1|CX619188 GABR1_44_B03.b1_A002 GA- or brassino... 42 0.10
gb|CX619860.1|CX619860 GABR1_48_F11.b1_A002 GA- or brassino... 42 0.10
gb|CX620792.1|CX620792 GABR1_54_C01.b1_A002 GA- or brassino... 42 0.10
gb|CX621597.1|CX621597 GABR1_59_B09.b1_A002 GA- or brassino... 42 0.10
gb|CX621647.1|CX621647 GABR1_59_G11.b1_A002 GA- or brassino... 42 0.10
gb|CX622273.1|CX622273 GABR1_63_A12.b2_A002 GA- or brassino... 42 0.10
gb|CX622462.1|CX622462 GABR1_64_D02.b2_A002 GA- or brassino... 42 0.10
gb|AY034143.1| Sorghum bicolor cinnamic acid 4-hydroxylase ... 42 0.10
gb|AC152913.1| Sorghum bicolor clone SB106M24, *** SEQUENCI... 42 0.10
gb|BZ337268.1|BZ337268 ia86c10.g1 WGS-SbicolorF (JM107 adap... 40 0.41
gb|CL157508.1|CL157508 104_345_10783630_114_31477_190 Sorgh... 40 0.41
gb|CL169858.1|CL169858 104_370_10813340_116_31789_044 Sorgh... 40 0.41
gb|CL184708.1|CL184708 104_398_10899045_116_32370_091 Sorgh... 40 0.41
gb|CW044186.1|CW044186 104_280_10508807_115_30242 Sorghum m... 40 0.41
gb|CW059591.1|CW059591 104_302_10519410_115_30168 Sorghum m... 40 0.41
gb|CW065654.1|CW065654 104_312_10523266_115_30130 Sorghum m... 40 0.41
gb|CW077000.1|CW077000 104_376_10890725_148_31794_245 Sorgh... 40 0.41
gb|CW093687.1|CW093687 104_457_10999927_148_37474_032 Sorgh... 40 0.41
gb|CW108453.1|CW108453 104_480_11097538_148_34500_045 Sorgh... 40 0.41
gb|CW152854.1|CW152854 104_554_11144724_116_36338_044 Sorgh... 40 0.41
gb|CW157845.1|CW157845 104_561_11147739_148_36392_010 Sorgh... 40 0.41
gb|CW214753.1|CW214753 104_646_11194178_148_37053_001 Sorgh... 40 0.41
gb|CW232735.1|CW232735 104_685_11212981_116_37365_055 Sorgh... 40 0.41
gb|CW264502.1|CW264502 104_733_11231332_148_35250_010 Sorgh... 40 0.41
gb|CW272418.1|CW272418 104_744_11403415_116_35346_020 Sorgh... 40 0.41
gb|CW272419.1|CW272419 104_744_11403415_116_36221_020 Sorgh... 40 0.41
gb|CW278490.1|CW278490 104_752_11406575_148_35682_082 Sorgh... 40 0.41
gb|CW314687.1|CW314687 104_805_11471961_116_35877_039 Sorgh... 40 0.41
gb|CW322187.1|CW322187 104_815_11475960_116_35946_082 Sorgh... 40 0.41
gb|CW322429.1|CW322429 104_816_11476093_116_35948_059 Sorgh... 40 0.41
gb|CW327210.1|CW327210 104_822_11478626_116_35968_001 Sorgh... 40 0.41
gb|CW328046.1|CW328046 104_824_11479087_116_35987_032 Sorgh... 40 0.41
gb|CW350303.1|CW350303 fsbb001f011i17k0 Sorghum methylation... 40 0.41
gb|CW379432.1|CW379432 fsbb001f058l08f0 Sorghum methylation... 40 0.41
gb|CW379433.1|CW379433 fsbb001f058l08k0 Sorghum methylation... 40 0.41
gb|CW404590.1|CW404590 fsbb001f096m18f0 Sorghum methylation... 40 0.41
gb|CW412894.1|CW412894 fsbb001f108m08f0 Sorghum methylation... 40 0.41
gb|CW415076.1|CW415076 fsbb001f115a08f0 Sorghum methylation... 40 0.41
gb|CW416108.1|CW416108 fsbb001f116i03f0 Sorghum methylation... 40 0.41
gb|CW459514.1|CW459514 fsbb001f206e18k0 Sorghum methylation... 40 0.41
gb|CW463618.1|CW463618 fsbb001f212f20f0 Sorghum methylation... 40 0.41
gb|CW474660.1|CW474660 fsbb001f230k07k0 Sorghum methylation... 40 0.41
gb|CW483692.1|CW483692 fsbb001f245h06f0 Sorghum methylation... 40 0.41
gb|CW484496.1|CW484496 fsbb001f246k19f0 Sorghum methylation... 40 0.41
gb|CW492088.1|CW492088 fsbb001f282d15f0 Sorghum methylation... 40 0.41
gb|CW493243.1|CW493243 fsbb001f283o16k0 Sorghum methylation... 40 0.41
gb|BE355191.1|BE355191 DG1_10_D02.g1_A002 Dark Grown 1 (DG1... 40 0.41
gb|BE357452.1|BE357452 DG1_15_A08.b2_A002 Dark Grown 1 (DG1... 40 0.41
gb|BE357860.1|BE357860 DG1_22_C12.g1_A002 Dark Grown 1 (DG1... 40 0.41
gb|BE359289.1|BE359289 DG1_40_D02.b1_A002 Dark Grown 1 (DG1... 40 0.41
gb|BE360028.1|BE360028 DG1_60_C08.g2_A002 Dark Grown 1 (DG1... 40 0.41
gb|BE362029.1|BE362029 DG1_83_E01.g1_A002 Dark Grown 1 (DG1... 40 0.41
gb|BE363286.1|BE363286 WS1_61_D09.g1_A002 Water-stressed 1 ... 40 0.41
gb|CX622160.1|CX622160 GABR1_62_H03.b2_A002 GA- or brassino... 40 0.41
>gb|CW217293.1|CW217293 104_650_11195580_116_37132_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195580, DNA
sequence
Length = 603
Score = 846 bits (427), Expect = 0.0
Identities = 516/545 (94%), Gaps = 3/545 (0%)
Strand = Plus / Plus
Query: 137 gcagatgccaggacgccgacggc---tcacacgtccgaagggacacgcctgtacagctcc 193
|||||||||||||||| |||||| ||| | |||||||||||||||| ||||||||||
Sbjct: 51 gcagatgccaggacgcagacggcccatcagatctccgaagggacacgccggtacagctcc 110
Query: 194 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaaggtgacgagc 253
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 111 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtgtccatgaaggtgacgagc 170
Query: 254 ccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcgtccacgtg 313
||||||||||||| ||| |||||||||||||| | ||||| ||||||||||||| ||
Sbjct: 171 ccgggggactccaccatcctcacgtcctcgggccgtgtcccctccggcagcgtccacctg 230
Query: 314 aagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 373
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aagtggtgaaccatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 290
Query: 374 gggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gggcacacccgccggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 350
Query: 434 atgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccacacctcgggg 493
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 351 atgttctcccggaggaaccgctccggccggaactcgagcgggtcgtcccacaccgcgggg 410
Query: 494 tcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccg 553
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tcccgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccg 470
Query: 554 gcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcgggtgcagg 613
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 471 gcgatcttgacgctggcgctggccctgtggggcagcatcagcggcgtcggcgggtgcagg 530
Query: 614 cgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccgtctccgac 673
|| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 531 cggagggactccttgacgacggcctgcaggtacggcaggttcgggaagtccgtctccgac 590
Query: 674 aggac 678
|||||
Sbjct: 591 aggac 595
>gb|BG102350.1|BG102350 RHIZ2_22_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 555
Score = 797 bits (402), Expect = 0.0
Identities = 494/524 (94%), Gaps = 3/524 (0%)
Strand = Plus / Minus
Query: 137 gcagatgccaggacgccgacggc---tcacacgtccgaagggacacgcctgtacagctcc 193
|||||||||||||||| |||||| ||| | || ||||||||||||| ||||||||||
Sbjct: 532 gcagatgccaggacgcagacggcccatcagatctcggaagggacacgccggtacagctcc 473
Query: 194 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaaggtgacgagc 253
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 472 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtgtccatgaaggtgacgagc 413
Query: 254 ccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcgtccacgtg 313
||||||||||||| ||| |||||||||||||| | |||||| ||||||||||||| ||
Sbjct: 412 ccgggggactccaccatcctcacgtcctcgggccgggtcccctccggcagcgtccacctg 353
Query: 314 aagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 373
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aagtggtgaaccatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 293
Query: 374 gggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gggcacacccgccggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 233
Query: 434 atgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccacacctcgggg 493
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 232 atgttctcccggaggaaccgctccggccggaactcgagcgggtcgtcccacaccgcgggg 173
Query: 494 tcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccg 553
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tcccgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccg 113
Query: 554 gcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcgggtgcagg 613
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 112 gcgatcttgacgctggcgctggccctgtggggcagcatcagcggcgtcggcgggtgcagg 53
Query: 614 cgcagggactccttgacgactgcctgcaggtaaggcaggttcgg 657
|| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 52 cggagcgactccttgacgacggcctgcaggtacggcaggttcgg 9
>gb|BG101809.1|BG101809 RHIZ2_22_F11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 641
Score = 771 bits (389), Expect = 0.0
Identities = 478/507 (94%), Gaps = 3/507 (0%)
Strand = Plus / Minus
Query: 137 gcagatgccaggacgccgacggc---tcacacgtccgaagggacacgcctgtacagctcc 193
|||||||||||||||| |||||| ||| | || ||||||||||||| ||||||||||
Sbjct: 507 gcagatgccaggacgcagacggcccatcagatctcggaagggacacgccggtacagctcc 448
Query: 194 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaaggtgacgagc 253
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 447 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtgtccatgaaggtgacgagc 388
Query: 254 ccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcgtccacgtg 313
||||||||||||| ||| |||||||||||||| | |||||| ||||||||||||| ||
Sbjct: 387 ccgggggactccaccatcctcacgtcctcgggccgggtcccctccggcagcgtccacctg 328
Query: 314 aagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 373
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aagtggtgaaccatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 268
Query: 374 gggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gggcacacccgccggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 208
Query: 434 atgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccacacctcgggg 493
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 207 atgttctcccggaggaaccgctccggccggaactcgagcgggtcgtcccacaccgcgggg 148
Query: 494 tcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccg 553
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tcccgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccg 88
Query: 554 gcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcgggtgcagg 613
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 87 gcgatcttgacgctggcgctggccctgtggggcagcatcagcggcgtcggcgggtgcagg 28
Query: 614 cgcagggactccttgacgactgcctgc 640
|| || |||||||||||||| ||||||
Sbjct: 27 cggagcgactccttgacgacggcctgc 1
>gb|BG053297.1|BG053297 RHIZ2_25_F08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 470
Score = 749 bits (378), Expect = 0.0
Identities = 441/462 (95%)
Strand = Plus / Minus
Query: 196 cttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaaggtgacgagccc 255
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 470 cttgtccaggcgcggcgtggcgacggcctgcagcggcgtgtccatgaaggtgacgagccc 411
Query: 256 gggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcgtccacgtgaa 315
||||||||||| ||| |||||||||||||| | |||||| ||||||||||||| ||||
Sbjct: 410 gggggactccaccatcctcacgtcctcgggccgggtcccctccggcagcgtccacctgaa 351
Query: 316 gtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccggg 375
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gtggtgaaccatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccggg 291
Query: 376 gcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgat 435
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gcacacccgccggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgat 231
Query: 436 gttctcccggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtc 495
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 230 gttctcccggaggaaccgctccggccggaactcgagcgggtcgtcccacaccgcggggtc 171
Query: 496 gcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccggc 555
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ccgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccggc 111
Query: 556 gatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcg 615
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 110 gatcttgacgctggcgctggccctgtggggcagcatcagcggcgtcggcgggtgcaggcg 51
Query: 616 cagggactccttgacgactgcctgcaggtaaggcaggttcgg 657
|| |||||||||||||| ||||||||||| |||||||||||
Sbjct: 50 gagcgactccttgacgacggcctgcaggtacggcaggttcgg 9
>gb|BG103168.1|BG103168 RHIZ2_19_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 582
Score = 668 bits (337), Expect = 0.0
Identities = 414/439 (94%), Gaps = 3/439 (0%)
Strand = Plus / Minus
Query: 137 gcagatgccaggacgccgacggc---tcacacgtccgaagggacacgcctgtacagctcc 193
|||||||||||||||| |||||| ||| | || ||||||||||||| ||||||||||
Sbjct: 439 gcagatgccaggacgcagacggcccatcagatctcggaagggacacgccggtacagctcc 380
Query: 194 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaaggtgacgagc 253
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 379 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtgtccatgaaggtgacgagc 320
Query: 254 ccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcgtccacgtg 313
||||||||||||| ||| |||||||||||||| | |||||| ||||||||||||| ||
Sbjct: 319 ccgggggactccaccatcctcacgtcctcgggccgggtcccctccggcagcgtccacctg 260
Query: 314 aagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 373
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aagtggtgaaccatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 200
Query: 374 gggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gggcacacccgccggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 140
Query: 434 atgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccacacctcgggg 493
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 139 atgttctcccggaggaaccgctccggccggaactcgagcgggtcgtcccacaccgcgggg 80
Query: 494 tcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccg 553
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tcccgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccg 20
Query: 554 gcgatcttgacgctggcgc 572
|||||||||||||||||||
Sbjct: 19 gcgatcttgacgctggcgc 1
>gb|BF705056.1|BF705056 RHIZ2_1_H06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 519
Score = 609 bits (307), Expect = e-172
Identities = 384/409 (93%), Gaps = 3/409 (0%)
Strand = Plus / Minus
Query: 137 gcagatgccaggacgccgacggc---tcacacgtccgaagggacacgcctgtacagctcc 193
|||||||||||||||| |||||| ||| | || ||||||||||||| ||||||||||
Sbjct: 409 gcagatgccaggacgcagacggcccatcagatctcggaagggacacgccggtacagctcc 350
Query: 194 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaaggtgacgagc 253
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 349 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtgtccatgaaggtgacgagc 290
Query: 254 ccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcgtccacgtg 313
||||||||||||| ||| |||||||||||||| | |||||| ||||||||||||| ||
Sbjct: 289 ccgggggactccaccatcctcacgtcctcgggccgggtcccctccggcagcgtccacctg 230
Query: 314 aagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 373
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aagtggtgaaccatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 170
Query: 374 gggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gggcacacccgccggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 110
Query: 434 atgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccacacctcgggg 493
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 109 atgttctcccggaggaaccgctccggccggaactcgagcgggtcgtcccacaccgcgggg 50
Query: 494 tcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 tcccgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 1
>gb|CW146760.1|CW146760 104_539_11139160_116_34991_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139160, DNA
sequence
Length = 663
Score = 579 bits (292), Expect = e-163
Identities = 340/356 (95%)
Strand = Plus / Plus
Query: 453 gctccggccggaactcgagcgggctgtcccacacctcggggtcgcgcgccaccgcccaca 512
||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||
Sbjct: 1 gctccggccggaactcgagcgggtcgtcccacaccgcggggtcccgcgccaccgcccaca 60
Query: 513 cgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcgc 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgttgacgacgacgttggcgcccttggggatgtcgtagccggcgatcttgacgctggcgc 120
Query: 573 tggccctgtgggggagcatcagcggcgtcggcgggtgcaggcgcagggactccttgacga 632
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 tggccctgtggggcagcatcagcggcgtcggcgggtgcaggcggagggactccttgacga 180
Query: 633 ctgcctgcaggtaaggcaggttcgggaagtccgtctccgacaggaccctgtcgcggccga 692
| ||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 181 cggcctgcaggtacggcaggttcgggaagtccgtctccgacaggacacggtcgcggccga 240
Query: 693 cgacgcggtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctccg 752
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgacatcgtccagctcctcctgcagcttctcctgcaccctggggttcctcagcagctccg 300
Query: 753 ccatcgcccactacaccgagatcaccgtcgtgtccgtgccggcggtgatcatgtcc 808
|||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 ccattgcccactccaccgagatcaccgtcgtgtcagtgccggcggtgatcatgtcc 356
Score = 345 bits (174), Expect = 5e-093
Identities = 204/214 (95%)
Strand = Plus / Plus
Query: 807 cccagaggaggcctatgacggtgtcgtcgctgaggtcgtacttgtccctgagagtgaaga 866
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cccagaggaggccaatgacggtgtcgtcgctgaggtcgtacttgtccctgagagtgaaga 509
Query: 867 gcgcgtcgacgaagtgctgctgggcgccgcgctgcttgagggccctggcgtgctcctcca 926
||||||||||||| ||||||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 510 gcgcgtcgacgaaatgctgctgggcgccgtgctgcttgagggccttggcttgctcctcca 569
Query: 927 tgatcttcacggtgaggcggtcgcgccgttcgccgtgggctttgaaggcctgctcgtcgt 986
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 570 tgatcttcacggtgaggcggtcgcggcggtcgccgtgggctttgaaggcctgctcgtcga 629
Query: 987 ccggggccagccagcgcagccacggtatgtgctg 1020
||||||||||||| ||||||||||| ||||||||
Sbjct: 630 ccggggccagccaccgcagccacgggatgtgctg 663
>gb|BF480873.1|BF480873 FM1_14_D03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 464
Score = 484 bits (244), Expect = e-135
Identities = 309/330 (93%), Gaps = 3/330 (0%)
Strand = Plus / Minus
Query: 137 gcagatgccaggacgccgacggc---tcacacgtccgaagggacacgcctgtacagctcc 193
|||||||||||||||| |||||| ||| | || ||||||||||||| ||||||||||
Sbjct: 330 gcagatgccaggacgcagacggcccatcagatctcggaagggacacgccggtacagctcc 271
Query: 194 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaaggtgacgagc 253
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 270 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtgtccatgaaggtgacgagc 211
Query: 254 ccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcgtccacgtg 313
||||||||||||| ||| |||||||||||||| | |||||| ||||||||||||| ||
Sbjct: 210 ccgggggactccaccatcctcacgtcctcgggccgggtcccctccggcagcgtccacctg 151
Query: 314 aagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 373
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aagtggtgaaccatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 91
Query: 374 gggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 gggcacacccgccggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 31
Query: 434 atgttctcccggaggaaccgctccggccgg 463
||||||||||||||||||||||||||||||
Sbjct: 30 atgttctcccggaggaaccgctccggccgg 1
>gb|BF480823.1|BF480823 FM1_14_D03.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 403
Score = 474 bits (239), Expect = e-132
Identities = 278/291 (95%)
Strand = Plus / Minus
Query: 776 accgtcgtgtccgtgccggcggtgatcatgtcccagaggaggcctatgacggtgtcgtcg 835
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 403 accgtcgtgtcagtgccggcggtgatcatgtcccagaggaggccaatgacggtgtcgtcg 344
Query: 836 ctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaagtgctgctgggcgccg 895
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 343 ctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaaatgctgctgggcgccg 284
Query: 896 cgctgcttgagggccctggcgtgctcctccatgatcttcacggtgaggcggtcgcgccgt 955
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 283 cgctgcttgagggccttggcttgctcctccatgatcttcacggtgaggcggtcgcggcgg 224
Query: 956 tcgccgtgggctttgaaggcctgctcgtcgtccggggccagccagcgcagccacggtatg 1015
|||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||
Sbjct: 223 tcgccgtgggctttgaaggcctgctcgtcgaccggggccagccaccgcagccacgggatg 164
Query: 1016 tgctgcgcgatggagagggacgcaccgatcttgatgccgttgtggacgatc 1066
||||||||||||||||||||||| |||| ||||||||||||||| ||||||
Sbjct: 163 tgctgcgcgatggagagggacgcgccgaccttgatgccgttgtgaacgatc 113
>gb|AF029856.1|AF029856 Sorghum bicolor cytochrome P450 CYP98A1 (CYP98A1) mRNA, complete cds
Length = 1784
Score = 454 bits (229), Expect = e-126
Identities = 622/753 (82%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 1533 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 1474
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 1473 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 1414
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 1413 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 1354
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 1353 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 1294
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 1293 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 1234
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 1233 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggga 1174
Query: 543 tgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcg 602
|||||||||| |||||||||| | | ||||||| ||||||||||||| || |||||||
Sbjct: 1173 tgtcgtagccaccgatcttgacattcgtgctggccttgtgggggagcatgagtggcgtcg 1114
Query: 603 gcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagt 662
|||||||||| || || |||||||||||||| ||||| ||||| || |||||| ||||||
Sbjct: 1113 gcgggtgcagccggagcgactccttgacgacggcctgtaggtacgggaggttctggaagt 1054
Query: 663 ccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttct 722
| ||||| ||| ||| | ||| ||||| || || ||||| |||||||| ||||||||||
Sbjct: 1053 cggtctctaacatgacgcggtcacggccaaccacacggtcgagctcctcttgcagcttct 994
Query: 723 cctgcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcaccgtcg 782
|||||||||||||||||| | |||||| ||||| ||||||| || ||||| || || |
Sbjct: 993 tctgcaccctggggttcctgaccagctctgccattgcccactcaacggagatgactgttg 934
Query: 783 tgtccgtgccggcggtgatcatgtcccagaggaggcctatgacggtgtcgtcgctgaggt 842
||||| | || || |||||||||||||| || || || || || ||||| || || ||||
Sbjct: 933 tgtccattccagcagtgatcatgtcccatagaagtccaataactgtgtcttcactaaggt 874
Query: 843 cgtacttgtccctgagagtgaagagcgcgtcgacgaagtgctgctgggcgccgcgctgct 902
|||||| | |||| |||||||| || || || |||||||||| ||| || | || ||
Sbjct: 873 cgtactgttgtttgagggtgaagagtgcatccacaaagtgctgcttggcaccactctcct 814
Query: 903 tgagggccctggcgtgctcctccatgatcttca 935
|||| | | | ||||||||||| ||||||||||
Sbjct: 813 tgagagactttgcgtgctcctcaatgatcttca 781
>gb|BG052600.1|BG052600 RHIZ2_25_F08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 481
Score = 446 bits (225), Expect = e-123
Identities = 292/314 (92%), Gaps = 3/314 (0%)
Strand = Plus / Minus
Query: 137 gcagatgccaggacgccgacggc---tcacacgtccgaagggacacgcctgtacagctcc 193
|||||||||||||||| |||||| ||| | || ||||||||||||| ||||||||||
Sbjct: 314 gcagatgccaggacgcagacggcccatcagatctcggaagggacacgccggtacagctcc 255
Query: 194 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaaggtgacgagc 253
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 254 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtgtccatgaaggtgacgagc 195
Query: 254 ccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggcagcgtccacgtg 313
||||||||||||| ||| |||||||||||||| | |||||| ||||||||||||| ||
Sbjct: 194 ccgggggactccaccatcctcacgtcctcgggccgggtcccctccggcagcgtccacctg 135
Query: 314 aagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 373
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aagtggtgaaccatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccg 75
Query: 374 gggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcg 433
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gggcacacccgccggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcn 15
Query: 434 atgttctcccggag 447
||||||||||||||
Sbjct: 14 atgttctcccggag 1
>gb|CX611829.1|CX611829 ANR1_27_A08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_A08_A002 3', mRNA sequence
Length = 825
Score = 424 bits (214), Expect = e-117
Identities = 490/582 (84%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 606 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 547
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 546 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 487
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 486 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 427
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 426 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 367
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 366 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 307
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 306 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggga 247
Query: 543 tgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcg 602
|||||||||| |||||||||| | | ||||||| ||||||||||||| || |||||||
Sbjct: 246 tgtcgtagccaccgatcttgacattcgtgctggccttgtgggggagcatgagtggcgtcg 187
Query: 603 gcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagt 662
|||||||||| || || |||||||||||||| ||||| ||||| || |||||| ||||||
Sbjct: 186 gcgggtgcagccggagcgactccttgacgacggcctgtaggtacgggaggttctggaagt 127
Query: 663 ccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttct 722
| ||||| ||| ||| | ||| ||||| || || ||||| |||||||| ||||||||||
Sbjct: 126 cggtctctaacatgacgcggtcacggccaaccacacggtcgagctcctcttgcagcttct 67
Query: 723 cctgcaccctggggttcctcagcagctccgccatcgcccact 764
|||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 66 tctgcaccctggggttcctgaccagctctgccattgcccact 25
>gb|BG051632.1|BG051632 FM1_59_B10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 436
Score = 420 bits (212), Expect = e-115
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 170 gaagggacacgcctgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagc 229
||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 280 gaagggacacgccggtacagctcctccttggccaggcgcggcgtggcgactgcctgcagc 221
Query: 230 ggcgtggccatgaaggtgacgagcccgggggactccatcatgctcacgtcctcggggcag 289
|||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | |
Sbjct: 220 ggcgtgtccatgaaggtgacgagcccgggggactccaccatcctcacgtcctcgggccgg 161
Query: 290 gtcccgctcggcagcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacg 349
||||| ||||||||||||| |||||||||| | |||||||||||||||||||||||||
Sbjct: 160 gtcccctccggcagcgtccacctgaagtggtgaaccatgtggccgatcatggacgccacg 101
Query: 350 aggttgatcccgagctgcgcgccggggcacacccggcggccggcgccgaacggcagcacg 409
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 100 aagttgatcccgagctgcgcgccggggcacacccggcggccggcgccgaacgggagcacg 41
Query: 410 cggaagtcggcgcccttgatgtcgatgttctcccggagga 449
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 40 cggaagtcggcgcgcttgatgtcgatgttctcccggagga 1
>gb|CN124702.1|CN124702 RHOH1_6_H08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_6_H08_A002 3', mRNA sequence
Length = 785
Score = 416 bits (210), Expect = e-114
Identities = 489/582 (84%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 588 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 529
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 528 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 469
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 468 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 409
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 408 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 349
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 348 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 289
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 288 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggga 229
Query: 543 tgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcg 602
|||||||||| |||||||||| | | ||||||| ||||||||||||| || ||||||
Sbjct: 228 tgtcgtagccaccgatcttgacattcgtgctggccttgtgggggagcatgagtggcgtcc 169
Query: 603 gcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagt 662
|||||||||| || || |||||||||||||| ||||| ||||| || |||||| ||||||
Sbjct: 168 gcgggtgcagccggagcgactccttgacgacggcctgtaggtacgggaggttctggaagt 109
Query: 663 ccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttct 722
| ||||| ||| ||| | ||| ||||| || || ||||| |||||||| ||||||||||
Sbjct: 108 cggtctctaacatgacgcggtcacggccaaccacacggtcgagctcctcttgcagcttct 49
Query: 723 cctgcaccctggggttcctcagcagctccgccatcgcccact 764
|||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 48 tctgcaccctggggttcctgaccagctctgccattgcccact 7
>gb|CW217294.1|CW217294 104_650_11195580_148_37131_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195580, DNA
sequence
Length = 587
Score = 412 bits (208), Expect = e-113
Identities = 247/260 (95%)
Strand = Plus / Minus
Query: 807 cccagaggaggcctatgacggtgtcgtcgctgaggtcgtacttgtccctgagagtgaaga 866
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cccagaggaggccaatgacggtgtcgtcgctgaggtcgtacttgtccctgagagtgaaga 352
Query: 867 gcgcgtcgacgaagtgctgctgggcgccgcgctgcttgagggccctggcgtgctcctcca 926
||||||||||||| ||||||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 351 gcgcgtcgacgaaatgctgctgggcgccgtgctgcttgagggccttggcttgctcctcca 292
Query: 927 tgatcttcacggtgaggcggtcgcgccgttcgccgtgggctttgaaggcctgctcgtcgt 986
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 291 tgatcttcacggtgaggcggtcgcggcggtcgccgtgggctttgaaggcctgctcgtcga 232
Query: 987 ccggggccagccagcgcagccacggtatgtgctgcgcgatggagagggacgcaccgatct 1046
||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||| ||
Sbjct: 231 ccggggccagccaccgcagccacgggatgtgctgcgcgatggagagggacgcgccgacct 172
Query: 1047 tgatgccgttgtggacgatc 1066
||||||||||||| ||||||
Sbjct: 171 tgatgccgttgtgaacgatc 152
Score = 141 bits (71), Expect = 2e-031
Identities = 80/83 (96%)
Strand = Plus / Minus
Query: 726 gcaccctggggttcctcagcagctccgccatcgcccactacaccgagatcaccgtcgtgt 785
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 587 gcaccctggggttcctcagcagctccgccattgcccactccaccgagatcaccgtcgtgt 528
Query: 786 ccgtgccggcggtgatcatgtcc 808
| |||||||||||||||||||||
Sbjct: 527 cagtgccggcggtgatcatgtcc 505
>gb|BF705139.1|BF705139 RHIZ2_1_H06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 476
Score = 392 bits (198), Expect = e-107
Identities = 231/242 (95%)
Strand = Plus / Minus
Query: 825 cggtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaagtgct 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 476 cggtgtcgtcgctgaggtcgtacttgtccctgagagtgaagagcgcgtcgacgaaatgct 417
Query: 885 gctgggcgccgcgctgcttgagggccctggcgtgctcctccatgatcttcacggtgaggc 944
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 416 gctgggcgccgcgctgcttgagggccttggcttgctcctccatgatcttcacggtgaggc 357
Query: 945 ggtcgcgccgttcgccgtgggctttgaaggcctgctcgtcgtccggggccagccagcgca 1004
||||||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 356 ggtcgcggcggtcgccgtgggctttgaaggcctgctcgtcgaccggggccagccaccgca 297
Query: 1005 gccacggtatgtgctgcgcgatggagagggacgcaccgatcttgatgccgttgtggacga 1064
||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||
Sbjct: 296 gccacgggatgtgctgcgcgatggagagggacgcgccgaccttgatgccgttgtgaacga 237
Query: 1065 tc 1066
||
Sbjct: 236 tc 235
>gb|CW121754.1|CW121754 104_499_11110079_148_34659_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11110079, DNA
sequence
Length = 613
Score = 389 bits (196), Expect = e-106
Identities = 478/572 (83%)
Strand = Plus / Minus
Query: 237 ccatgaaggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgc 296
||||||| ||||||||||||||||||||||||||| | |||||||| || | ||| ||
Sbjct: 594 ccatgaacgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgcctt 535
Query: 297 tcggcagcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttga 356
|||||| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||
Sbjct: 534 ccggcagggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttga 475
Query: 357 tcccgagctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagt 416
| ||||||||||| || ||||| || || |||||||| || ||||||| ||| | |||||
Sbjct: 474 tgccgagctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagt 415
Query: 417 cggcgcccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggc 476
|| |||||||||||||||||||||| ||||| |||||||||| | |||| ||||||
Sbjct: 414 cgctgcccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggt 355
Query: 477 tgtcccacacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgccct 536
|| ||| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||
Sbjct: 354 tgctccagaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgccct 295
Query: 537 tggggatgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcg 596
|||||||||||||||| |||||||||| | | ||||||| ||||||||||||| || |
Sbjct: 294 tggggatgtcgtagccaccgatcttgacattcgtgctggccttgtgggggagcatgagtg 235
Query: 597 gcgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcg 656
|||||||||||||||| || || |||||||||||||| ||||| ||||| || ||||||
Sbjct: 234 gcgtcggcgggtgcagccggagcgactccttgacgacggcctgtaggtacgggaggttct 175
Query: 657 ggaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcctgca 716
||||||| ||||| ||| ||| | ||| ||||| || || ||||| |||||||| ||||
Sbjct: 174 ggaagtcggtctctaacatgacgcggtcacggccaaccacacggtcgagctcctcttgca 115
Query: 717 gcttctcctgcaccctggggttcctcagcagctccgccatcgcccactacaccgagatca 776
|||||| |||||||||||||||||| | |||||| ||||| ||||||| || ||||| |
Sbjct: 114 gcttcttctgcaccctggggttcctgaccagctctgccattgcccactcaacggagatga 55
Query: 777 ccgtcgtgtccgtgccggcggtgatcatgtcc 808
| || |||||| | || || ||||||||||||
Sbjct: 54 ctgttgtgtccattccagcagtgatcatgtcc 23
>gb|CX610986.1|CX610986 ANR1_22_B03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B03_A002 3', mRNA sequence
Length = 791
Score = 359 bits (181), Expect = 3e-097
Identities = 442/529 (83%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 529 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 470
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 469 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 410
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 409 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 350
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 349 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 290
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 289 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 230
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | ||||| |||||||||||||
Sbjct: 229 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttagcgcccttgggga 170
Query: 543 tgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcg 602
|||||||||| |||||||||| | | ||||||| ||||||||||||| || |||||||
Sbjct: 169 tgtcgtagccaccgatcttgacattcgtgctggccttgtgggggagcatgagtggcgtcg 110
Query: 603 gcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagt 662
|||||||||| || || |||||||||||||| ||||| ||||| || |||||| ||||||
Sbjct: 109 gcgggtgcagccggagcgactccttgacgacggcctgtaggtacgggaggttctggaagt 50
Query: 663 ccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctc 711
| ||||| ||| ||| | ||| ||||| || || ||||| ||||||||
Sbjct: 49 cggtctctaacatgacgcggtcacggccaaccacacggtcgagctcctc 1
>gb|CX606441.1|CX606441 ANR1_3_C01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_3_C01_A002 3', mRNA sequence
Length = 678
Score = 355 bits (179), Expect = 5e-096
Identities = 410/487 (84%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 503 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 444
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 443 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 384
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 383 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 324
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 323 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 264
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 263 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 204
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 203 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggga 144
Query: 543 tgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcg 602
||||||| || |||||||||| | | ||||||| ||||||||||||| || |||||||
Sbjct: 143 tgtcgtaaccaccgatcttgacattcgtgctggccttgtgggggagcatgagtggcgtcg 84
Query: 603 gcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagt 662
|||||||||| || || |||||||||||||| ||||| ||||| || |||||| ||||||
Sbjct: 83 gcgggtgcagccggagcgactccttgacgacggcctgtaggtacgggaggttctggaagt 24
Query: 663 ccgtctc 669
| |||||
Sbjct: 23 cggtctc 17
>gb|BE357542.1|BE357542 DG1_21_G06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 349 bits (176), Expect = 3e-094
Identities = 446/536 (83%)
Strand = Plus / Minus
Query: 313 gaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgcc 372
|||||||||||| | ||| ||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 602 gaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccgagctgcgcacc 543
Query: 373 ggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtc 432
||||| || || |||||||| || ||||||| ||| | ||||||| ||||||||||||
Sbjct: 542 agggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgcccttgatgtc 483
Query: 433 gatgttctcccggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggg 492
|||||||||| ||||| |||||||||| | |||| |||||| || ||| |||| |||
Sbjct: 482 gatgttctcctccaggaagcgctccggcctgtactccagcgggttgctccagaccttggg 423
Query: 493 gtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagcc 552
||||| ||||| ||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 422 atcgcgtgccactgcccacacgttcaccatcacgttggcgcccttggggatgtcgtagcc 363
Query: 553 ggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcgggtgcag 612
|||||||||| | | ||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 362 accgatcttgacattcgtgctggccttgtgggggagcatgagtggcgtcggcgggtgcag 303
Query: 613 gcgcagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccgtctccga 672
|| || |||||||||||||| ||||| | ||| || |||||| ||||||| ||||| |
Sbjct: 302 ccggagcgactccttgacgacggcctgtacgtacgggaggttctggaagtcggtctctaa 243
Query: 673 caggaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccct 732
|| ||| | ||| ||||| || || ||||| |||||||| |||||||||| |||||||||
Sbjct: 242 catgacgcggtcacggccaaccacacggtcgagctcctcttgcagcttcttctgcaccct 183
Query: 733 ggggttcctcagcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgcc 792
||||||||| | |||||| ||||| ||||||| || ||||| || || |||||| | ||
Sbjct: 182 ggggttcctgaccagctctgccattgcccactcaacggagatgactgttgtgtccattcc 123
Query: 793 ggcggtgatcatgtcccagaggaggcctatgacggtgtcgtcgctgaggtcgtact 848
|| |||||||||||||| || || || || || ||||| || || ||||||||||
Sbjct: 122 agcagtgatcatgtcccatagaagtccaataactgtgtcttcactaaggtcgtact 67
>gb|CW228065.1|CW228065 104_667_11206156_116_37246_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206156, DNA
sequence
Length = 689
Score = 343 bits (173), Expect = 2e-092
Identities = 413/493 (83%)
Strand = Plus / Minus
Query: 316 gtggtgcagcatgtggccgatcatggacgccacgaggttgatcccgagctgcgcgccggg 375
||||||||| | ||| ||||||||||| |||||||||||||| ||||||||||| || ||
Sbjct: 689 gtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccgagctgcgcaccagg 630
Query: 376 gcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgcccttgatgtcgat 435
||| || || |||||||| || ||||||| ||| | ||||||| |||||||||||||||
Sbjct: 629 gcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgcccttgatgtcgat 570
Query: 436 gttctcccggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtc 495
||||||| ||||| |||||||||| | |||| |||||| || ||| |||| ||| ||
Sbjct: 569 gttctcctccaggaagcgctccggcctgtactccagcgggttgctccagaccttgggatc 510
Query: 496 gcgcgccaccgcccacacgttgacgacgacgttggcgcccttggggatgtcgtagccggc 555
||| ||||| ||||||||||| || | ||||||||||||||||||||||||||||| |
Sbjct: 509 gcgtgccactgcccacacgttcaccatcacgttggcgcccttggggatgtcgtagccacc 450
Query: 556 gatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcggcgggtgcaggcg 615
||||||||| | | ||||||| ||||||||||||| || ||||||||||||||||| ||
Sbjct: 449 gatcttgacattcgtgctggccttgtgggggagcatgagtggcgtcggcgggtgcagccg 390
Query: 616 cagggactccttgacgactgcctgcaggtaaggcaggttcgggaagtccgtctccgacag 675
|| |||||||||||||| ||||| ||||| || |||||| ||||||| ||||| |||
Sbjct: 389 gagcgactccttgacgacggcctgtaggtacgggaggttctggaagtcggtctctaacat 330
Query: 676 gaccctgtcgcggccgacgacgcggtccagctcctcctgcagcttctcctgcaccctggg 735
||| | ||| ||||| || || ||||| |||||||| |||||||||| ||||||||||||
Sbjct: 329 gacgcggtcacggccaaccacacggtcgagctcctcttgcagcttcttctgcaccctggg 270
Query: 736 gttcctcagcagctccgccatcgcccactacaccgagatcaccgtcgtgtccgtgccggc 795
|||||| | |||||| ||||| ||||||| || ||||| || || |||||| | || ||
Sbjct: 269 gttcctgaccagctctgccattgcccactcaacggagatgactgttgtgtccattccagc 210
Query: 796 ggtgatcatgtcc 808
||||||||||||
Sbjct: 209 agtgatcatgtcc 197
>gb|CX609323.1|CX609323 ANR1_12_B01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_12_B01_A002 3', mRNA sequence
Length = 727
Score = 329 bits (166), Expect = 3e-088
Identities = 378/449 (84%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 449 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 390
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 389 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 330
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 329 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 270
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 269 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 210
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 209 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 150
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 149 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggga 90
Query: 543 tgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcg 602
|||||||||| |||||||||| | | ||||||| ||||||||||||| || ||||||
Sbjct: 89 tgtcgtagccaccgatcttgacattcgtgctggccttgtgggggagcatgagtggcgtcn 30
Query: 603 gcgggtgcaggcgcagggactccttgacg 631
|||||||||| || || ||||||||||||
Sbjct: 29 gcgggtgcagccggagcgactccttgacg 1
>gb|CD226062.1|CD226062 CCC1_43_G11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_43_G11_A007 3', mRNA sequence
Length = 647
Score = 321 bits (162), Expect = 7e-086
Identities = 378/450 (84%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 450 tgtacagctcctcctcctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 391
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 390 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 331
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 330 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 271
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 270 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 211
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 210 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 151
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||| ||||||||||
Sbjct: 150 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcacccttgggga 91
Query: 543 tgtcgtagccggcgatcttgacgctggcgctggccctgtgggggagcatcagcggcgtcg 602
|||||||||| |||||||||| | | ||||||| ||||||||||||| || |||||||
Sbjct: 90 tgtcgtagccaccgatcttgacattcgtgctggccttgtgggggagcatgagtggcgtcg 31
Query: 603 gcgggtgcaggcgcagggactccttgacga 632
|||||||||| || || |||||||||||||
Sbjct: 30 gcgggtgcagccggagcgactccttgacga 1
>gb|CX618899.1|CX618899 GABR1_42_G11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_42_G11_A002 3', mRNA sequence
Length = 666
Score = 285 bits (144), Expect = 4e-075
Identities = 339/404 (83%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 404 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 345
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 344 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 285
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 284 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 225
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 224 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 165
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 164 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 105
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 104 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggga 45
Query: 543 tgtcgtagccggcgatcttgacgctggcgctggccctgtggggg 586
|||||||||| |||||||||| | | ||||||| ||||||||
Sbjct: 44 tgtcgtagccaccgatcttgacattcgtgctggccttgtggggg 1
>gb|BE357675.1|BE357675 DG1_21_G06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 688
Score = 281 bits (142), Expect = 6e-074
Identities = 322/382 (84%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 400 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 341
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 340 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 281
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 280 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 221
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 220 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 161
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 160 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 101
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 100 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggga 41
Query: 543 tgtcgtagccggcgatcttgac 564
|||||||||| ||||||||||
Sbjct: 40 tgtcgtagccaccgatcttgac 19
>gb|BI074326.1|BI074326 IP1_14_H01.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 566
Score = 281 bits (142), Expect = 6e-074
Identities = 322/382 (84%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 390 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 331
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 330 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 271
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 270 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 211
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 210 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 151
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 150 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 91
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 90 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggga 31
Query: 543 tgtcgtagccggcgatcttgac 564
|||||||||| ||||||||||
Sbjct: 30 tgtcgtagccaccgatcttgac 9
>gb|CD207935.1|CD207935 HS1_36_D10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_36_D10_A012 3', mRNA sequence
Length = 659
Score = 274 bits (138), Expect = 2e-071
Identities = 321/382 (84%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 397 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 338
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 337 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 278
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | || | |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 277 gggacctctcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 218
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 217 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 158
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 157 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 98
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 97 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggga 38
Query: 543 tgtcgtagccggcgatcttgac 564
|||||||||| ||||||||||
Sbjct: 37 tgtcgtagccaccgatcttgac 16
>gb|CX611894.1|CX611894 ANR1_27_G09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_G09_A002 3', mRNA sequence
Length = 696
Score = 262 bits (132), Expect = 6e-068
Identities = 336/404 (83%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 404 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 345
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 344 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 285
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| ||||||||||| | | | ||||||||||| |||||||||||||| || |
Sbjct: 284 gggaccactcgaagtggtgcaaaaggggcccgatcatggaggccacgaggttgatgccca 225
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 224 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 165
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 164 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 105
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggga 542
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 104 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggga 45
Query: 543 tgtcgtagccggcgatcttgacgctggcgctggccctgtggggg 586
|||||||||| |||||||||| | | ||||||| ||||||||
Sbjct: 44 tgtcgtagccaccgatcttgacattcgtgctggccttgtggggg 1
>gb|CD209953.1|CD209953 HS1_56_H05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_H05_A012 3', mRNA sequence
Length = 626
Score = 252 bits (127), Expect = 6e-065
Identities = 301/359 (83%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 359 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 300
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 299 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 240
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 239 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 180
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 179 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 120
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 119 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 60
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggg 541
| |||| ||| ||||| ||||| ||||||||||| || | ||||||||||||||||||
Sbjct: 59 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggg 1
>gb|CD230597.1|CD230597 SS1_47_C04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_47_C04_A012 3', mRNA sequence
Length = 537
Score = 252 bits (127), Expect = 6e-065
Identities = 301/359 (83%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 359 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 300
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 299 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 240
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 239 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 180
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 179 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 120
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 119 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 60
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttgggg 541
| |||| ||| ||||| ||||| ||||||||||| || | ||||||||||||||||||
Sbjct: 59 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttgggg 1
>gb|CD208941.1|CD208941 HS1_45_F08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_45_F08_A012 3', mRNA sequence
Length = 620
Score = 250 bits (126), Expect = 2e-064
Identities = 300/358 (83%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 358 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 299
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 298 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 239
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 238 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 179
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 178 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 119
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgggctgtccc 482
|||||||||||||||||||| ||||| |||||||||| | |||| |||||| || ||
Sbjct: 118 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgggttgctcc 59
Query: 483 acacctcggggtcgcgcgccaccgcccacacgttgacgacgacgttggcgcccttggg 540
| |||| ||| ||||| ||||| ||||||||||| || | |||||||||||||||||
Sbjct: 58 agaccttgggatcgcgtgccactgcccacacgttcaccatcacgttggcgcccttggg 1
>gb|CF073719.1|CF073719 FE1_11_F09.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_11_F09_A002 5', mRNA sequence
Length = 599
Score = 214 bits (108), Expect = 1e-053
Identities = 222/260 (85%)
Strand = Plus / Plus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 312 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 371
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || | |||||
Sbjct: 372 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgcctcccggca 431
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 432 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 491
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 492 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 551
Query: 423 ccttgatgtcgatgttctcc 442
||||||||||||||||||||
Sbjct: 552 ccttgatgtcgatgttctcc 571
>gb|AI724143.1|AI724143 RHIZ1_7_D04.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 561
Score = 208 bits (105), Expect = 8e-052
Identities = 140/152 (92%)
Strand = Plus / Minus
Query: 170 gaagggacacgcctgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagc 229
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gaagggacacgccggtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagc 103
Query: 230 ggcgtggccatgaaggtgacgagcccgggggactccatcatgctcacgtcctcggggcag 289
|||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||| |
Sbjct: 102 ggcgtgtccatgaaggtgacgagcccgggggactccaccatcctcacgtnctcgggccgt 43
Query: 290 gtcccgctcggcagcgtccacgtgaagtggtg 321
||||| ||||||||||||| ||||||||||
Sbjct: 42 gtcccctccggcagcgtccacctgaagtggtg 11
>gb|CW110281.1|CW110281 104_483_11103608_148_34522_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11103608, DNA
sequence
Length = 553
Score = 202 bits (102), Expect = 5e-050
Identities = 126/134 (94%)
Strand = Plus / Minus
Query: 933 tcacggtgaggcggtcgcgccgttcgccgtgggctttgaaggcctgctcgtcgtccgggg 992
||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||
Sbjct: 553 tcacggtgaggcggtcgcggcggtcgccgtgggctttgaaggcctgctcgtcgaccgggg 494
Query: 993 ccagccagcgcagccacggtatgtgctgcgcgatggagagggacgcaccgatcttgatgc 1052
||||||| ||||||||||| |||||||||||||||||||||||||| |||| ||||||||
Sbjct: 493 ccagccaccgcagccacgggatgtgctgcgcgatggagagggacgcgccgaccttgatgc 434
Query: 1053 cgttgtggacgatc 1066
||||||| ||||||
Sbjct: 433 cgttgtgaacgatc 420
>gb|BG102616.1|BG102616 RHIZ2_35_B12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 419
Score = 198 bits (100), Expect = 7e-049
Identities = 244/292 (83%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| ||||||||||| |||||||| || || || || ||| ||||||
Sbjct: 292 tgtacagctcctccttctccaggcgcggtgtggcgacagcttgtagtggtgtgcccatga 233
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 232 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 173
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| ||||||||||| | ||| ||||||||||| ||||| |||||||| ||||
Sbjct: 172 gggaccactcgaagtggtgcacaaggtgcccgatcatggaggccacaaggttgatgccga 113
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 112 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 53
Query: 423 ccttgatgtcgatgttctcccggaggaaccgctccggccggaactcgagcgg 474
|||||||||||||||||||| ||||| |||||||||| | |||| |||||
Sbjct: 52 ccttgatgtcgatgttctcctccaggaagcgctccggcctgtactccagcgg 1
>gb|BG158679.1|BG158679 RHIZ2_43_G05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 416
Score = 196 bits (99), Expect = 3e-048
Identities = 139/152 (91%), Gaps = 3/152 (1%)
Strand = Plus / Minus
Query: 137 gcagatgccaggacgccgacggc---tcacacgtccgaagggacacgcctgtacagctcc 193
|||||||||||||||| |||||| ||| | || ||||||||||||| ||||||||||
Sbjct: 152 gcagatgccaggacgcagacggcccatcagatctcggaagggacacgccggtacagctcc 93
Query: 194 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatgaaggtgacgagc 253
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 92 tccttgtccaggcgcggcgtggcgacggcctgcagcggcgtgtccatgaaggtgacgagc 33
Query: 254 ccgggggactccatcatgctcacgtcctcggg 285
||||||||||||| ||| ||||||| ||||||
Sbjct: 32 ccgggggactccaccatcctcacgtnctcggg 1
>gb|AW284271.1|AW284271 LG1_268_H07.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 436
Score = 178 bits (90), Expect = 7e-043
Identities = 207/246 (84%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 246 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 187
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 186 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 127
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 126 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacgaggttgatgccga 67
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 66 gctgcgcaccagggcagacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 7
Query: 423 ccttga 428
||||||
Sbjct: 6 ccttga 1
>gb|CX608572.1|CX608572 ANR1_39_H09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_39_H09_A002 3', mRNA sequence
Length = 489
Score = 176 bits (89), Expect = 3e-042
Identities = 209/249 (83%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 249 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 190
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 189 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 130
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| ||||||||||| | ||| ||||||||||| |||||||||||||| ||||
Sbjct: 129 gggaccactcgaagtggtgcaaaaggtgcccgatcatggaggccacgaggttgatgccga 70
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggcagcacgcggaagtcggcgc 422
||||||| || ||||| || || |||||||| || ||||||| ||| | ||||||| ||
Sbjct: 69 gctgcgcaccagggcaaacacgccggccggcaccaaacggcaacaccctgaagtcgctgc 10
Query: 423 ccttgatgt 431
|||||||||
Sbjct: 9 ccttgatgt 1
>gb|BG103340.1|BG103340 RHIZ2_19_A04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 415
Score = 163 bits (82), Expect = 4e-038
Identities = 100/106 (94%)
Strand = Plus / Minus
Query: 961 gtgggctttgaaggcctgctcgtcgtccggggccagccagcgcagccacggtatgtgctg 1020
||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||
Sbjct: 415 gtgggctttgaaggcctgctcgtcgaccggggccagccaccgcagccacgggatgtgctg 356
Query: 1021 cgcgatggagagggacgcaccgatcttgatgccgttgtggacgatc 1066
|||||||||||||||||| |||| ||||||||||||||| ||||||
Sbjct: 355 cgcgatggagagggacgcgccgaccttgatgccgttgtgaacgatc 310
>gb|CX608731.1|CX608731 ANR1_40_H07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_40_H07_A002 3', mRNA sequence
Length = 505
Score = 163 bits (82), Expect = 4e-038
Identities = 187/222 (84%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 249 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 190
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctcggggcaggtcccgctcggca 302
| ||||||||||||||||||||||||||| | |||||||| || | ||| || |||||
Sbjct: 189 acgtgacgagcccgggggactccatcatgttgacgtcctccggtctggtgccttccggca 130
Query: 303 gcgtccacgtgaagtggtgcagcatgtggccgatcatggacgccacgaggttgatcccga 362
| | |||| |||||||||||| | ||| ||||||||||| |||||| ||||||| ||||
Sbjct: 129 gggaccactcgaagtggtgcagaaggtgcccgatcatggaggccacggggttgatgccga 70
Query: 363 gctgcgcgccggggcacacccggcggccggcgccgaacggca 404
||||||| || ||||| || || |||||||| || |||||||
Sbjct: 69 gctgcgcaccagggcagacacgccggccggcaccaaacggca 28
>gb|BG465716.1|BG465716 RHIZ2_47_G08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 518
Score = 143 bits (72), Expect = 4e-032
Identities = 90/96 (93%)
Strand = Plus / Minus
Query: 971 aaggcctgctcgtcgtccggggccagccagcgcagccacggtatgtgctgcgcgatggag 1030
||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 518 aaggcctgctcgtcgaccggggccagccaccgcagccacgggatgtgctgcgcgatggag 459
Query: 1031 agggacgcaccgatcttgatgccgttgtggacgatc 1066
|||||||| |||| ||||||||||||||| ||||||
Sbjct: 458 agggacgcgccgaccttgatgccgttgtgaacgatc 423
>gb|CF071700.1|CF071700 FE1_18_C03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_18_C03_A002 3', mRNA sequence
Length = 300
Score = 111 bits (56), Expect = 1e-022
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 183 tgtacagctcctccttgtccaggcgcggcgtggcgacggcctgcagcggcgtggccatga 242
|||||||||||||||| |||||||||||| ||||||| || || || || ||| ||||||
Sbjct: 141 tgtacagctcctccttctccaggcgcggcttggcgacagcttgtagtggtgtgcccatga 82
Query: 243 aggtgacgagcccgggggactccatcatgctcacgtcctc 282
| ||||||||||||||||||||||||||| | ||||||||
Sbjct: 81 acgtgacgagcccgggggactccatcatgttgacgtcctc 42
>gb|CW303796.1|CW303796 104_788_11465430_148_35696_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465430, DNA
sequence
Length = 694
Score = 77.8 bits (39), Expect = 2e-012
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 444 ggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcg 498
||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 308 ggaggaaccgctcgggccggaactcgagcggcgcgtcccacacctcggggtcgcg 254
>gb|CW385551.1|CW385551 fsbb001f069b07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f069b07, DNA
sequence
Length = 613
Score = 77.8 bits (39), Expect = 2e-012
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 444 ggaggaaccgctccggccggaactcgagcgggctgtcccacacctcggggtcgcg 498
||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 414 ggaggaaccgctcgggccggaactcgagcggcgcgtcccacacctcggggtcgcg 468
>gb|CW179942.1|CW179942 104_594_11160375_148_36632_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160375, DNA
sequence
Length = 604
Score = 63.9 bits (32), Expect = 3e-008
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 372 cggggcacacccggcggccggcgccgaacggcagca 407
||||||||| ||||||||||||||||||||||||||
Sbjct: 496 cggggcacatccggcggccggcgccgaacggcagca 461
Score = 48.1 bits (24), Expect = 0.002
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 445 gaggaaccgctccggccggaactc 468
||||||||||||||||||||||||
Sbjct: 411 gaggaaccgctccggccggaactc 388
>gb|BG048287.1|BG048287 OV1_16_C09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 483
Score = 63.9 bits (32), Expect = 3e-008
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 372 cggggcacacccggcggccggcgccgaacggcagca 407
||||||||| ||||||||||||||||||||||||||
Sbjct: 71 cggggcacatccggcggccggcgccgaacggcagca 36
>gb|BM317850.1|BM317850 OV1_16_C09.b9_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 384
Score = 63.9 bits (32), Expect = 3e-008
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 372 cggggcacacccggcggccggcgccgaacggcagca 407
||||||||| ||||||||||||||||||||||||||
Sbjct: 71 cggggcacatccggcggccggcgccgaacggcagca 36
>gb|CF481729.1|CF481729 POL1_73_E07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_73_E07_A002 5', mRNA sequence
Length = 193
Score = 63.9 bits (32), Expect = 3e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 372 cggggcacacccggcggccggcgccgaacggcagca 407
||||||||||||||||||||||| ||||||||||||
Sbjct: 73 cggggcacacccggcggccggcgtcgaacggcagca 108
Score = 42.1 bits (21), Expect = 0.10
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 445 gaggaaccgctccggccggaa 465
|||||||||||||||||||||
Sbjct: 158 gaggaaccgctccggccggaa 178
>gb|BZ423254.1|BZ423254 id47b10.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id47b10 5', DNA sequence
Length = 651
Score = 61.9 bits (31), Expect = 1e-007
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 593 agcggcgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcagg 652
|||||||||| ||||||||| |||| || ||||||| ||| ||||||||||| || |||
Sbjct: 278 agcggcgtcgacgggtgcagccgcatggcctccttgcagacggcctgcaggtaggggagg 219
Query: 653 ttcgggaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcc 712
| || | ||||| |||| |||| | | ||||||| || ||||||||||||||||||
Sbjct: 218 ctgggcaggtccgactcctccaggcggcggccgcggcccaccacgcggtccagctcctcc 159
Query: 713 tgc 715
|||
Sbjct: 158 tgc 156
>gb|CL703376.2|CL703376 SP__Ba0095M14.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0095M14 3', DNA sequence
Length = 619
Score = 61.9 bits (31), Expect = 1e-007
Identities = 100/123 (81%)
Strand = Plus / Plus
Query: 593 agcggcgtcggcgggtgcaggcgcagggactccttgacgactgcctgcaggtaaggcagg 652
|||||||||| ||||||||| |||| || ||||||| ||| ||||||||||| || |||
Sbjct: 248 agcggcgtcgacgggtgcagccgcatggcctccttgcagacggcctgcaggtaggggagg 307
Query: 653 ttcgggaagtccgtctccgacaggaccctgtcgcggccgacgacgcggtccagctcctcc 712
| || | ||||| |||| |||| | | ||||||| || ||||||||||||||||||
Sbjct: 308 ctgggcaggtccgactcctccaggcggcggccgcggcccaccacgcggtccagctcctcc 367
Query: 713 tgc 715
|||
Sbjct: 368 tgc 370
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 346,700
Number of Sequences: 832831
Number of extensions: 346700
Number of successful extensions: 108023
Number of sequences better than 0.5: 303
Number of HSP's better than 0.5 without gapping: 297
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 107167
Number of HSP's gapped (non-prelim): 827
length of query: 1067
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1047
effective length of database: 474,703,049
effective search space: 497014092303
effective search space used: 497014092303
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)