BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2643556.2.1
(1354 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG605915.1|BG605915 RHIZ2_83_B06.g1_A003 Rhizome2 (RHIZ2... 720 0.0
gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (L... 533 e-149
gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sor... 527 e-148
gb|BG357398.1|BG357398 OV2_29_D08.g1_A002 Ovary 2 (OV2) Sor... 521 e-146
gb|BG357559.1|BG357559 OV2_31_D08.g1_A002 Ovary 2 (OV2) Sor... 521 e-146
gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sor... 486 e-135
gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2... 466 e-129
gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorgh... 363 3e-098
gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Mer... 349 4e-094
gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Mer... 349 4e-094
gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorg... 349 4e-094
gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sor... 349 4e-094
gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sor... 349 4e-094
gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sor... 349 4e-094
gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sor... 349 4e-094
gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sor... 349 4e-094
gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sor... 349 4e-094
gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorgh... 297 1e-078
gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorgh... 297 1e-078
gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorgh... 297 1e-078
gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation... 297 1e-078
gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation... 297 1e-078
gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sor... 272 8e-071
gb|CW096871.1|CW096871 104_462_11002135_116_34348_020 Sorgh... 268 1e-069
gb|CF758974.1|CF758974 DSAF1_38_G07.g1_A011 Drought-stresse... 268 1e-069
gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorg... 250 3e-064
gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorg... 248 1e-063
gb|CL193546.1|CL193546 104_417_10941008_116_32282_028 Sorgh... 246 5e-063
gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorgh... 232 7e-059
gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum m... 232 7e-059
gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorgh... 232 7e-059
gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorgh... 232 7e-059
gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorgh... 232 7e-059
gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sor... 208 1e-051
gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sor... 200 2e-049
gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum m... 188 9e-046
gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum m... 188 9e-046
gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation... 188 9e-046
gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorg... 188 9e-046
gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorg... 188 9e-046
gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sor... 188 9e-046
gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorg... 180 2e-043
gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorgh... 176 3e-042
gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorgh... 176 3e-042
gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorgh... 176 3e-042
gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle ... 176 3e-042
gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle... 176 3e-042
gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription... 176 3e-042
gb|CW407708.1|CW407708 fsbb001f101e21k0 Sorghum methylation... 167 3e-039
gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorgh... 163 5e-038
gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation... 153 5e-035
gb|CW214921.1|CW214921 104_647_11194268_116_37464_080 Sorgh... 149 8e-034
gb|AY827471.1| Sorghum bicolor MADS box transcription facto... 149 8e-034
gb|CW096872.1|CW096872 104_462_11002135_148_34352_020 Sorgh... 145 1e-032
gb|CW152181.1|CW152181 104_553_11144352_116_36325_092 Sorgh... 143 5e-032
gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorgh... 141 2e-031
gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation... 141 2e-031
gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation... 141 2e-031
gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infecte... 141 2e-031
gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated ... 141 2e-031
gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sor... 137 3e-030
gb|CL181374.1|CL181374 104_392_10896713_116_31926_089 Sorgh... 133 5e-029
gb|CL181375.1|CL181375 104_392_10896713_148_31925_089 Sorgh... 133 5e-029
gb|CW023615.1|CW023615 104_163_10432547_1_30001 Sorghum met... 133 5e-029
gb|CW032483.1|CW032483 104_261_10501401_115_30364 Sorghum m... 133 5e-029
gb|CD463019.1|CD463019 ETH1_41_H12.g1_A002 Ethylene-treated... 133 5e-029
gb|CW359630.1|CW359630 fsbb001f027f15k0 Sorghum methylation... 129 7e-028
gb|BG240086.1|BG240086 OV1_17_G05.b1_A002 Ovary 1 (OV1) Sor... 129 7e-028
gb|BG241308.1|BG241308 OV1_40_G05.b1_A002 Ovary 1 (OV1) Sor... 129 7e-028
gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box prot... 129 7e-028
gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorgh... 127 3e-027
gb|CW293027.1|CW293027 104_773_11414425_148_35591_009 Sorgh... 127 3e-027
gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorgh... 127 3e-027
gb|CW322676.1|CW322676 104_816_11476224_116_35954_088 Sorgh... 127 3e-027
gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-lik... 127 3e-027
gb|CW210331.1|CW210331 104_640_11189738_116_37000_003 Sorgh... 121 2e-025
gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) ... 119 7e-025
gb|BF657151.1|BF657151 OV2_21_D05.b1_A002 Ovary 2 (OV2) Sor... 117 3e-024
gb|CL193545.1|CL193545 104_417_10941008_114_32276_028 Sorgh... 113 4e-023
gb|CW032589.1|CW032589 104_261_10501470_114_30363 Sorghum m... 113 4e-023
gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation... 111 2e-022
gb|BF705575.1|BF705575 RHIZ2_4_H03.b1_A003 Rhizome2 (RHIZ2)... 109 7e-022
gb|CW230669.1|CW230669 104_679_11210696_116_37485_022 Sorgh... 107 3e-021
gb|CW296060.1|CW296060 104_777_11461289_148_35626_069 Sorgh... 107 3e-021
gb|CW457468.1|CW457468 fsbb001f203e20f0 Sorghum methylation... 107 3e-021
gb|AW681038.1|AW681038 WS1_8_D09.b1_A002 Water-stressed 1 (... 107 3e-021
gb|BG739474.1|BG739474 EM1_81_D03.b1_A002 Embryo 1 (EM1) So... 107 3e-021
gb|BM324114.1|BM324114 PIC1_24_D02.b1_A002 Pathogen-infecte... 107 3e-021
gb|BM325449.1|BM325449 PIC1_44_F08.b1_A002 Pathogen-infecte... 107 3e-021
gb|CB927715.1|CB927715 ABA1_27_E04.g1_A012 Abscisic acid-tr... 107 3e-021
gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seed... 107 3e-021
gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated... 107 3e-021
gb|CD431870.1|CD431870 ETH1_11_B03.g1_A002 Ethylene-treated... 107 3e-021
gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum b... 107 3e-021
gb|CF486426.1|CF486426 POL1_37_D04.g1_A002 Pollen Sorghum b... 107 3e-021
gb|CN135385.1|CN135385 OX1_32_B05.g1_A002 Oxidatively-stres... 107 3e-021
gb|CW209670.1|CW209670 104_639_11189376_116_36992_084 Sorgh... 105 1e-020
gb|CW209671.1|CW209671 104_639_11189376_148_36991_084 Sorgh... 105 1e-020
gb|CF431741.1|CF431741 NIT1_10_D03.g1_A002 Nitrogen-deficie... 105 1e-020
gb|CW452258.1|CW452258 fsbb001f192l07k0 Sorghum methylation... 103 4e-020
gb|BF586649.1|BF586649 FM1_29_H03.b1_A003 Floral-Induced Me... 103 4e-020
gb|CW409217.1|CW409217 fsbb001f103g24f0 Sorghum methylation... 100 7e-019
gb|CF487280.1|CF487280 POL1_42_G07.g1_A002 Pollen Sorghum b... 100 7e-019
gb|CW275678.1|CW275678 104_749_11405089_148_35390_013 Sorgh... 98 3e-018
gb|CW072287.1|CW072287 104_325_10592182_114_30538 Sorghum m... 92 2e-016
gb|CW214896.1|CW214896 104_647_11194255_148_37166_032 Sorgh... 92 2e-016
gb|CW386489.1|CW386489 fsbb001f070g18k0 Sorghum methylation... 92 2e-016
gb|CW411862.1|CW411862 fsbb001f107d12k0 Sorghum methylation... 92 2e-016
gb|CW498786.1|CW498786 fsbb001f293d08f0 Sorghum methylation... 90 6e-016
gb|CL171822.1|CL171822 104_373_10889698_148_31776_370 Sorgh... 88 2e-015
gb|CW249676.1|CW249676 104_711_11222976_116_35044_088 Sorgh... 88 2e-015
gb|CW249677.1|CW249677 104_711_11222976_148_35048_088 Sorgh... 88 2e-015
gb|CW329596.1|CW329596 104_826_11479928_116_35994_028 Sorgh... 88 2e-015
gb|CW329597.1|CW329597 104_826_11479928_148_35993_028 Sorgh... 88 2e-015
gb|CW393458.1|CW393458 fsbb001f080i11k0 Sorghum methylation... 88 2e-015
gb|CW457553.1|CW457553 fsbb001f203g17k0 Sorghum methylation... 88 2e-015
gb|CW480188.1|CW480188 fsbb001f239c02f0 Sorghum methylation... 88 2e-015
gb|CW480189.1|CW480189 fsbb001f239c02k0 Sorghum methylation... 88 2e-015
gb|CW199961.1|CW199961 104_625_11183794_116_36864_043 Sorgh... 84 4e-014
gb|CD432822.1|CD432822 ETH1_33_F08.g1_A002 Ethylene-treated... 84 4e-014
gb|CW093595.1|CW093595 104_456_10999867_148_37470_068 Sorgh... 80 6e-013
gb|CW161335.1|CW161335 104_568_11150361_148_36430_043 Sorgh... 80 6e-013
gb|CW457552.1|CW457552 fsbb001f203g17f0 Sorghum methylation... 80 6e-013
gb|CW195540.1|CW195540 104_619_11180693_116_36805_027 Sorgh... 76 9e-012
gb|CW195541.1|CW195541 104_619_11180693_148_36801_027 Sorgh... 76 9e-012
gb|CW273794.1|CW273794 104_746_11404091_116_35362_040 Sorgh... 76 9e-012
gb|CW296923.1|CW296923 104_778_11461772_116_35631_066 Sorgh... 76 9e-012
gb|CW296924.1|CW296924 104_778_11461772_148_35635_066 Sorgh... 76 9e-012
gb|CW297229.1|CW297229 104_779_11461931_116_35636_042 Sorgh... 76 9e-012
gb|CW472381.1|CW472381 fsbb001f227e20f0 Sorghum methylation... 76 9e-012
gb|BF704612.1|BF704612 FM1_49_C04.b1_A003 Floral-Induced Me... 76 9e-012
gb|CF432922.1|CF432922 NIT1_19_H01.g1_A002 Nitrogen-deficie... 76 9e-012
gb|CL171821.1|CL171821 104_373_10889698_116_31777_370 Sorgh... 74 4e-011
gb|CW038852.1|CW038852 104_271_10505158_115_30388 Sorghum m... 74 4e-011
gb|CW331236.1|CW331236 104_828_11480800_116_36022_056 Sorgh... 74 4e-011
gb|CW331237.1|CW331237 104_828_11480800_148_36021_056 Sorgh... 74 4e-011
gb|CW428412.1|CW428412 fsbb001f141b16k0 Sorghum methylation... 74 4e-011
gb|BZ694660.1|BZ694660 SP__Ba0050A11.f SP__Ba Sorghum propi... 72 1e-010
gb|CW296059.1|CW296059 104_777_11461289_116_35622_069 Sorgh... 72 1e-010
gb|CW788871.1|CW788871 SP__Ba0050A11.f SP__Ba Sorghum propi... 72 1e-010
gb|CW378066.1|CW378066 fsbb001f056k18f0 Sorghum methylation... 70 6e-010
gb|CW318041.1|CW318041 104_810_11473735_148_35867_030 Sorgh... 66 9e-009
gb|CW165612.1|CW165612 104_574_11152600_116_36481_064 Sorgh... 64 4e-008
gb|CW206089.1|CW206089 104_634_11187411_148_36952_004 Sorgh... 64 4e-008
gb|CL150340.1|CL150340 104_332_10778461_116_31358_013 Sorgh... 60 6e-007
gb|CL170087.1|CL170087 104_370_10813531_116_31789_235 Sorgh... 60 6e-007
gb|CL176346.1|CL176346 104_382_10893067_116_31763_283 Sorgh... 60 6e-007
gb|CW088554.1|CW088554 104_433_10948220_114_32568_072 Sorgh... 60 6e-007
gb|CW088555.1|CW088555 104_433_10948220_116_32578_072 Sorgh... 60 6e-007
gb|CW422054.1|CW422054 fsbb001f131c13f0 Sorghum methylation... 60 6e-007
gb|CW472382.1|CW472382 fsbb001f227e20k0 Sorghum methylation... 60 6e-007
gb|AW678464.1|AW678464 WS1_16_D12.b1_A002 Water-stressed 1 ... 60 6e-007
gb|AW678480.1|AW678480 WS1_16_D03.b1_A002 Water-stressed 1 ... 60 6e-007
gb|AW746875.1|AW746875 WS1_56_C05.b1_A002 Water-stressed 1 ... 60 6e-007
gb|AW924005.1|AW924005 WS1_32_E02.b1_A002 Water-stressed 1 ... 60 6e-007
gb|AW924046.1|AW924046 WS1_49_D06.b1_A002 Water-stressed 1 ... 60 6e-007
gb|BE365263.1|BE365263 PI1_26_D10.b1_A002 Pathogen induced ... 60 6e-007
gb|BE600878.1|BE600878 PI1_92_D01.b1_A002 Pathogen induced ... 60 6e-007
gb|BE601014.1|BE601014 PI1_95_H02.b1_A002 Pathogen induced ... 60 6e-007
gb|BF421169.1|BF421169 FM1_6_C07.b1_A003 Floral-Induced Mer... 60 6e-007
gb|BG355470.1|BG355470 EM1_16_H03.b1_A002 Embryo 1 (EM1) So... 60 6e-007
gb|BG933507.1|BG933507 WS1_4_C03.b1_A002 Water-stressed 1 (... 60 6e-007
gb|BM323902.1|BM323902 PIC1_29_A07.b1_A002 Pathogen-infecte... 60 6e-007
gb|BM324399.1|BM324399 PIC1_27_G12.b1_A002 Pathogen-infecte... 60 6e-007
gb|CF430206.1|CF430206 PH1_26_B03.g1_A002 Phosphorous-defic... 60 6e-007
gb|CF484314.1|CF484314 POL1_4_B10.g1_A002 Pollen Sorghum bi... 60 6e-007
gb|CN129656.1|CN129656 RHOH1_36_D08.g1_A002 Acid- and alkal... 60 6e-007
gb|CN132011.1|CN132011 OX1_3_C05.g1_A002 Oxidatively-stress... 60 6e-007
gb|CN132026.1|CN132026 OX1_3_D10.g1_A002 Oxidatively-stress... 60 6e-007
gb|CN134777.1|CN134777 OX1_28_A03.g1_A002 Oxidatively-stres... 60 6e-007
gb|CN135407.1|CN135407 OX1_32_D03.g1_A002 Oxidatively-stres... 60 6e-007
gb|CL173100.1|CL173100 104_376_10890649_116_31795_169 Sorgh... 58 2e-006
gb|CL173101.1|CL173101 104_376_10890649_148_31794_169 Sorgh... 58 2e-006
gb|CW034880.1|CW034880 104_265_10502824_115_30379 Sorghum m... 58 2e-006
gb|CW077644.1|CW077644 104_383_10893411_116_31773_243 Sorgh... 58 2e-006
gb|CW152182.1|CW152182 104_553_11144352_148_36330_092 Sorgh... 58 2e-006
gb|CD432530.1|CD432530 ETH1_30_C08.g1_A002 Ethylene-treated... 58 2e-006
gb|CW061066.1|CW061066 104_304_10520200_114_30143 Sorghum m... 56 9e-006
gb|CW142324.1|CW142324 104_533_11136795_116_34938_006 Sorgh... 56 9e-006
gb|CW142325.1|CW142325 104_533_11136795_148_34942_006 Sorgh... 56 9e-006
gb|CW302656.1|CW302656 104_786_11464832_148_35669_018 Sorgh... 56 9e-006
gb|CW448512.1|CW448512 fsbb001f182c17f0 Sorghum methylation... 56 9e-006
gb|CW448513.1|CW448513 fsbb001f182c17k0 Sorghum methylation... 56 9e-006
gb|CW462985.1|CW462985 fsbb001f211f24f0 Sorghum methylation... 56 9e-006
gb|CW502333.1|CW502333 fsbb001f298j20f0 Sorghum methylation... 56 9e-006
gb|CW502334.1|CW502334 fsbb001f298j20k0 Sorghum methylation... 56 9e-006
gb|CW372294.1|CW372294 fsbb001f048c08f0 Sorghum methylation... 54 3e-005
gb|CW489948.1|CW489948 fsbb001f275c14k0 Sorghum methylation... 54 3e-005
gb|CW025535.1|CW025535 104_227_10488251_116_30505 Sorghum m... 52 1e-004
gb|CW068300.1|CW068300 104_317_10525048_1_30096 Sorghum met... 52 1e-004
gb|CW092369.1|CW092369 104_454_10999117_116_33040_049 Sorgh... 52 1e-004
gb|CW253750.1|CW253750 104_717_11225270_116_35113_055 Sorgh... 52 1e-004
gb|CW299620.1|CW299620 104_782_11463215_116_35689_086 Sorgh... 52 1e-004
gb|CW393457.1|CW393457 fsbb001f080i11f0 Sorghum methylation... 52 1e-004
gb|CD430222.1|CD430222 ETH1_17_G03.g1_A002 Ethylene-treated... 50 5e-004
gb|CW117952.1|CW117952 104_494_11107937_148_34681_075 Sorgh... 46 0.008
gb|CW502569.1|CW502569 fsbb001f298p16f0 Sorghum methylation... 46 0.008
gb|CW417861.1|CW417861 fsbb001f121b03f0 Sorghum methylation... 42 0.13
>gb|BG605915.1|BG605915 RHIZ2_83_B06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 683
Score = 720 bits (363), Expect = 0.0
Identities = 487/527 (92%), Gaps = 6/527 (1%)
Strand = Plus / Plus
Query: 448 ggtacaagaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtcacca 507
||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 6 ggtacaagaaggcaaacagtgacaactccagcgctgctggtacgattgcagaggtcacga 65
Query: 508 ttcagcattacaagcaggaatctgctaggctgaggcagcagatcgttaacttgcagaact 567
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 66 ttcagcactacaagcaggaatctgctaggctgaggcagcagatcactaacttgcagaact 125
Query: 568 ccaacagggccctgataggtgattctatcacaaccatgagccacaaggaacttaagcact 627
||||||||||||||||||||||| |||||||||||||||| |||||| || || |||
Sbjct: 126 ccaacagggccctgataggtgat---atcacaaccatgagccccaaggacctcaaacacc 182
Query: 628 tggagactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtgctgt 687
|||||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||
Sbjct: 183 tggagactaggttagacaaagcacttggaaagattagagcaagaaagaacgaagtgctgt 242
Query: 688 gttctgaagtcgagtacatgcagagaagggaaatggagttgcagaatgacaacttgtact 747
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gttctgaactagagtacatgcagagaagggaaatggagttgcagaatgacaacttgtact 302
Query: 748 taaggagccgggttgatgagaatgaaagggcacaacagacagcgaacatgatgggggcac 807
|||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 303 taaggagcagggttgatgagaatgaaagggcacaacagacagtgaacatgatgggggcgc 362
Query: 808 catcgacaagtgagtatcagcagcacggttttactccttatgatccaataaggagcttcc 867
||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||
Sbjct: 363 catcgacaagtgattatcagcagcagggttttattccttatgacccaataaggagcttcc 422
Query: 868 tgcagttcaacatcgtgcagcagcctcagttctattctcagcaggaggaccggaaagact 927
|||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 423 tgcagttcaacatcatgcagcagcctcagttttactcccagcaggaggaccggaaagact 482
Query: 928 tcaacgaccaaggtggaagataaatattggacctctcaagcttcagt 974
||| ||| |||||||||||| ||| || |||||| |||||||||
Sbjct: 483 tca---acctaggtggaagatagataatgaacctctggagcttcagt 526
Score = 73.8 bits (37), Expect = 4e-011
Identities = 99/116 (85%), Gaps = 9/116 (7%)
Strand = Plus / Plus
Query: 1006 agtgagaaact-gagctac---attactgtggaattatatgtaaagactagtactactgc 1061
||||||||||| ||||||| |||| |||| |||||||||| |||| ||||||||||||
Sbjct: 548 agtgagaaactggagctacattattagtgtgaaattatatgt-aagattagtactactgc 606
Query: 1062 ttcatatgtgcatgtgcgcacacgcgcacgtagtatgcacaatttcatcccactat 1117
||||| || ||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 607 ttcatgtg----tgtgcgcacacgcctacatagtatgcacaatttcatccaactat 658
>gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 533 bits (269), Expect = e-149
Identities = 307/319 (96%), Gaps = 3/319 (0%)
Strand = Plus / Plus
Query: 215 tgggtccgctgcggagaggaacaacggcggcaggggcaagggcaagactgagatcaagcg 274
|||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 260 tgggtctgctgcagagaggaacaacggc---aggggcaagggcaagactgagatcaagcg 316
Query: 275 catcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctcctcaa 334
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 317 catcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaacggcctcctcaa 376
Query: 335 gaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccag 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccag 436
Query: 395 ccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccattgagaggtacaa 454
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 437 ccgcggccgcctctacgagtactccaacaacagcgtgaaggccaccattgagaggtacaa 496
Query: 455 gaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtcaccattcagca 514
|||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 497 gaaggcaaacagtgacaactccagcgctgctggtacgattgcagaggtcacgattcagca 556
Query: 515 ttacaagcaggaatctgct 533
||||||||||||||||||
Sbjct: 557 ctacaagcaggaatctgct 575
Score = 89.7 bits (45), Expect = 6e-016
Identities = 88/101 (87%), Gaps = 6/101 (5%)
Strand = Plus / Plus
Query: 84 aagagcatgcacatccgagaagaggaggctacaccatccacagtaacaggcatca---tg 140
|||||||||||||||||||||||| | |||| ||||| ||||| |||||||||| ||
Sbjct: 117 aagagcatgcacatccgagaagagcaagctatgccatcaacagtgacaggcatcatggtg 176
Query: 141 tcgaccctgacttcggcggggcagcagaagctgaaggagcc 181
|||||||||||||||||||| || |||||||||||||||
Sbjct: 177 tcgaccctgacttcggcggg---gctgaagctgaaggagcc 214
>gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 569
Score = 527 bits (266), Expect = e-148
Identities = 304/316 (96%), Gaps = 3/316 (0%)
Strand = Plus / Plus
Query: 215 tgggtccgctgcggagaggaacaacggcggcaggggcaagggcaagactgagatcaagcg 274
|||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 257 tgggtctgctgcagagaggaacaacggc---aggggcaagggcaagactgagatcaagcg 313
Query: 275 catcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctcctcaa 334
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 314 catcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaacggcctcctcaa 373
Query: 335 gaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccag 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccag 433
Query: 395 ccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccattgagaggtacaa 454
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 434 ccgcggccgcctctacgagtactccaacaacagcgtgaaggccaccattgagaggtacaa 493
Query: 455 gaaggcaaccagtgacaactccagcgcagctggtacgattgcagaggtcaccattcagca 514
|||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 494 gaaggcaaacagtgacaactccagcgctgctggtacgattgcagaggtcacgattcagca 553
Query: 515 ttacaagcaggaatct 530
|||||||||||||||
Sbjct: 554 ctacaagcaggaatct 569
Score = 111 bits (56), Expect = 2e-022
Identities = 88/98 (89%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 84 aagagcatgcacatccgagaagaggaggctacaccatccacagtaacaggcatcatgtcg 143
|||||||||||||||||||||||| | |||| ||||| ||||| |||||||||||||||
Sbjct: 117 aagagcatgcacatccgagaagagcaagctatgccatcaacagtgacaggcatcatgtcg 176
Query: 144 accctgacttcggcggggcagcagaagctgaaggagcc 181
||||||||||||||||| || |||||||||||||||
Sbjct: 177 accctgacttcggcggg---gctgaagctgaaggagcc 211
>gb|BG357398.1|BG357398 OV2_29_D08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 606
Score = 521 bits (263), Expect = e-146
Identities = 369/403 (91%), Gaps = 6/403 (1%)
Strand = Plus / Plus
Query: 572 cagggccctgataggtgattctatcacaaccatgagccacaaggaacttaagcacttgga 631
||||||||||||||||||| |||||||||||||||| |||||| || || ||| ||||
Sbjct: 51 cagggccctgataggtgat---atcacaaccatgagccccaaggacctcaaacacctgga 107
Query: 632 gactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtgctgtgttc 691
|||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||||
Sbjct: 108 gactaggttagacaaagcacttggaaagattagagcaagaaagaacgaagtgctgtgttc 167
Query: 692 tgaagtcgagtacatgcagagaagggaaatggagttgcagaatgacaacttgtacttaag 751
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tgaactagagtacatgcagagaagggaaatggagttgcagaatgacaacttgtacttaag 227
Query: 752 gagccgggttgatgagaatgaaagggcacaacagacagcgaacatgatgggggcaccatc 811
|||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 228 gagcagggttgatgagaatgaaagggcacaacagacagtgaacatgatgggggcgccatc 287
Query: 812 gacaagtgagtatcagcagcacggttttactccttatgatccaataaggagcttcctgca 871
||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct: 288 gacaagtgattatcagcagcagggttttattccttatgacccaataaggagcttcctgca 347
Query: 872 gttcaacatcgtgcagcagcctcagttctattctcagcaggaggaccggaaagacttcaa 931
|||||||||| |||||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 348 gttcaacatcatgcagcagcctcagttttactcccagcaggaggaccggaaagacttca- 406
Query: 932 cgaccaaggtggaagataaatattggacctctcaagcttcagt 974
||| |||||||||||| ||| || |||||| |||||||||
Sbjct: 407 --acctaggtggaagatagataatgaacctctggagcttcagt 447
Score = 73.8 bits (37), Expect = 4e-011
Identities = 99/116 (85%), Gaps = 9/116 (7%)
Strand = Plus / Plus
Query: 1006 agtgagaaact-gagctac---attactgtggaattatatgtaaagactagtactactgc 1061
||||||||||| ||||||| |||| |||| |||||||||| |||| ||||||||||||
Sbjct: 469 agtgagaaactggagctacattattagtgtgaaattatatgt-aagattagtactactgc 527
Query: 1062 ttcatatgtgcatgtgcgcacacgcgcacgtagtatgcacaatttcatcccactat 1117
||||| || ||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 528 ttcatgtg----tgtgcgcacacgcctacatagtatgcacaatttcatccaactat 579
Score = 60.0 bits (30), Expect = 6e-007
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 537 ctgaggcagcagatcgttaacttgcagaactccaacag 574
||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ctgaggcagcagatcactaacttgcagaactccaacag 38
>gb|BG357559.1|BG357559 OV2_31_D08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 665
Score = 521 bits (263), Expect = e-146
Identities = 369/403 (91%), Gaps = 6/403 (1%)
Strand = Plus / Plus
Query: 572 cagggccctgataggtgattctatcacaaccatgagccacaaggaacttaagcacttgga 631
||||||||||||||||||| |||||||||||||||| |||||| || || ||| ||||
Sbjct: 109 cagggccctgataggtgat---atcacaaccatgagccccaaggacctcaaacacctgga 165
Query: 632 gactaggttagacaaagctctcggaaagattagagcaaaaaagaacgatgtgctgtgttc 691
|||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||||
Sbjct: 166 gactaggttagacaaagcacttggaaagattagagcaagaaagaacgaagtgctgtgttc 225
Query: 692 tgaagtcgagtacatgcagagaagggaaatggagttgcagaatgacaacttgtacttaag 751
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tgaactagagtacatgcagagaagggaaatggagttgcagaatgacaacttgtacttaag 285
Query: 752 gagccgggttgatgagaatgaaagggcacaacagacagcgaacatgatgggggcaccatc 811
|||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 286 gagcagggttgatgagaatgaaagggcacaacagacagtgaacatgatgggggcgccatc 345
Query: 812 gacaagtgagtatcagcagcacggttttactccttatgatccaataaggagcttcctgca 871
||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct: 346 gacaagtgattatcagcagcagggttttattccttatgacccaataaggagcttcctgca 405
Query: 872 gttcaacatcgtgcagcagcctcagttctattctcagcaggaggaccggaaagacttcaa 931
|||||||||| |||||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 406 gttcaacatcatgcagcagcctcagttttactcccagcaggaggaccggaaagacttca- 464
Query: 932 cgaccaaggtggaagataaatattggacctctcaagcttcagt 974
||| |||||||||||| ||| || |||||| |||||||||
Sbjct: 465 --acctaggtggaagatagataatgaacctctggagcttcagt 505
Score = 151 bits (76), Expect = 2e-034
Identities = 88/92 (95%)
Strand = Plus / Plus
Query: 483 gctggtacgattgcagaggtcaccattcagcattacaagcaggaatctgctaggctgagg 542
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 5 gctggtacgattgcagaggtcacgattcagcactacaagcaggaatctgctaggctgagg 64
Query: 543 cagcagatcgttaacttgcagaactccaacag 574
||||||||| |||||||||||||||||||||
Sbjct: 65 cagcagatcactaacttgcagaactccaacag 96
Score = 77.8 bits (39), Expect = 2e-012
Identities = 111/130 (85%), Gaps = 10/130 (7%)
Strand = Plus / Plus
Query: 1006 agtgagaaact-gagctac---attactgtggaattatatgtaaagactagtactactgc 1061
||||||||||| ||||||| |||| |||| |||||||||| |||| ||||||||||||
Sbjct: 527 agtgagaaactggagctacattattagtgtgaaattatatgt-aagattagtactactgc 585
Query: 1062 ttcatatgtgcatgtgcgcacacgcgcacgtagtatgcacaatttcatcccactat-tat 1120
||||| || ||||||||||||| || |||||||||||||||||||| ||||| ||
Sbjct: 586 ttcatgtg----tgtgcgcacacgcctacatagtatgcacaatttcatccaactatataa 641
Query: 1121 ggcttggcac 1130
||||||||||
Sbjct: 642 ggcttggcac 651
>gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 486 bits (245), Expect = e-135
Identities = 277/287 (96%), Gaps = 3/287 (1%)
Strand = Plus / Plus
Query: 215 tgggtccgctgcggagaggaacaacggcggcaggggcaagggcaagactgagatcaagcg 274
|||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 257 tgggtctgctgcagagaggaacaacggc---aggggcaagggcaagactgagatcaagcg 313
Query: 275 catcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctcctcaa 334
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 314 catcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaacggcctcctcaa 373
Query: 335 gaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccag 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccag 433
Query: 395 ccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccattgagaggtacaa 454
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 434 ccgcggccgcctctacgagtactccaacaacagcgtgaaggccaccattgagaggtacaa 493
Query: 455 gaaggcaaccagtgacaactccagcgcagctggtacgattgcagagg 501
|||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 494 gaaggcaaacagtgacaactccagcgctgctggtacgattgcagagg 540
Score = 111 bits (56), Expect = 2e-022
Identities = 88/98 (89%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 84 aagagcatgcacatccgagaagaggaggctacaccatccacagtaacaggcatcatgtcg 143
|||||||||||||||||||||||| | |||| ||||| ||||| |||||||||||||||
Sbjct: 117 aagagcatgcacatccgagaagagcaagctatgccatcaacagtgacaggcatcatgtcg 176
Query: 144 accctgacttcggcggggcagcagaagctgaaggagcc 181
||||||||||||||||| || |||||||||||||||
Sbjct: 177 accctgacttcggcggg---gctgaagctgaaggagcc 211
>gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 535
Score = 466 bits (235), Expect = e-129
Identities = 267/277 (96%), Gaps = 3/277 (1%)
Strand = Plus / Plus
Query: 215 tgggtccgctgcggagaggaacaacggcggcaggggcaagggcaagactgagatcaagcg 274
|||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 262 tgggtctgctgcagagaggaacaacggc---aggggcaagggcaagactgagatcaagcg 318
Query: 275 catcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctcctcaa 334
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 319 catcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaacggcctcctcaa 378
Query: 335 gaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccag 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccag 438
Query: 395 ccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccattgagaggtacaa 454
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 439 ccgcggccgcctctacgagtactccaacaacagcgtgaaggccaccattgagaggtacaa 498
Query: 455 gaaggcaaccagtgacaactccagcgcagctggtacg 491
|||||||| |||||||||||||||||| |||||||||
Sbjct: 499 gaaggcaaacagtgacaactccagcgctgctggtacg 535
Score = 111 bits (56), Expect = 2e-022
Identities = 88/98 (89%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 84 aagagcatgcacatccgagaagaggaggctacaccatccacagtaacaggcatcatgtcg 143
|||||||||||||||||||||||| | |||| ||||| ||||| |||||||||||||||
Sbjct: 122 aagagcatgcacatccgagaagagcaagctatgccatcaacagtgacaggcatcatgtcg 181
Query: 144 accctgacttcggcggggcagcagaagctgaaggagcc 181
||||||||||||||||| || |||||||||||||||
Sbjct: 182 accctgacttcggcggg---gctgaagctgaaggagcc 216
>gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226403, DNA
sequence
Length = 572
Score = 363 bits (183), Expect = 3e-098
Identities = 206/213 (96%), Gaps = 3/213 (1%)
Strand = Plus / Plus
Query: 215 tgggtccgctgcggagaggaacaacggcggcaggggcaagggcaagactgagatcaagcg 274
|||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 77 tgggtctgctgcagagaggaacaacggc---aggggcaagggcaagactgagatcaagcg 133
Query: 275 catcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctcctcaa 334
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 134 catcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaacggcctcctcaa 193
Query: 335 gaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccag 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttctccag 253
Query: 395 ccgcggccgcctctacgagtacgccaacaacag 427
|||||||||||||||||||||| ||||||||||
Sbjct: 254 ccgcggccgcctctacgagtactccaacaacag 286
>gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 530
Score = 349 bits (176), Expect = 4e-094
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 135 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 194
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 195 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 254
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaa 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 255 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagtgtgaa 314
Query: 434 gggcaccattgagaggtacaagaaggcaaccagtgacaactcca 477
| |||||||||||||||||||||||| | |||||||| |||||
Sbjct: 315 gtccaccattgagaggtacaagaaggccaacagtgacacctcca 358
>gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 515
Score = 349 bits (176), Expect = 4e-094
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 135 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 194
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 195 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 254
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaa 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 255 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagtgtgaa 314
Query: 434 gggcaccattgagaggtacaagaaggcaaccagtgacaactcca 477
| |||||||||||||||||||||||| | |||||||| |||||
Sbjct: 315 gtccaccattgagaggtacaagaaggccaacagtgacacctcca 358
>gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 551
Score = 349 bits (176), Expect = 4e-094
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 233 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 292
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 293 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 352
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaa 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 353 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagtgtgaa 412
Query: 434 gggcaccattgagaggtacaagaaggcaaccagtgacaactcca 477
| |||||||||||||||||||||||| | |||||||| |||||
Sbjct: 413 gtccaccattgagaggtacaagaaggccaacagtgacacctcca 456
>gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 474
Score = 349 bits (176), Expect = 4e-094
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 77 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 136
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 137 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 196
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaa 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 197 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagtgtgaa 256
Query: 434 gggcaccattgagaggtacaagaaggcaaccagtgacaactcca 477
| |||||||||||||||||||||||| | |||||||| |||||
Sbjct: 257 gtccaccattgagaggtacaagaaggccaacagtgacacctcca 300
>gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 434
Score = 349 bits (176), Expect = 4e-094
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 171 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 230
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 231 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 290
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaa 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 291 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagtgtgaa 350
Query: 434 gggcaccattgagaggtacaagaaggcaaccagtgacaactcca 477
| |||||||||||||||||||||||| | |||||||| |||||
Sbjct: 351 gtccaccattgagaggtacaagaaggccaacagtgacacctcca 394
>gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 349 bits (176), Expect = 4e-094
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 161 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 220
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 221 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 280
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaa 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 281 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagtgtgaa 340
Query: 434 gggcaccattgagaggtacaagaaggcaaccagtgacaactcca 477
| |||||||||||||||||||||||| | |||||||| |||||
Sbjct: 341 gtccaccattgagaggtacaagaaggccaacagtgacacctcca 384
>gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 349 bits (176), Expect = 4e-094
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 179 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 238
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 239 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 298
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaa 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 299 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagtgtgaa 358
Query: 434 gggcaccattgagaggtacaagaaggcaaccagtgacaactcca 477
| |||||||||||||||||||||||| | |||||||| |||||
Sbjct: 359 gtccaccattgagaggtacaagaaggccaacagtgacacctcca 402
>gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 436
Score = 349 bits (176), Expect = 4e-094
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 181 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 240
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 241 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 300
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaa 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagtgtgaa 360
Query: 434 gggcaccattgagaggtacaagaaggcaaccagtgacaactcca 477
| |||||||||||||||||||||||| | |||||||| |||||
Sbjct: 361 gtccaccattgagaggtacaagaaggccaacagtgacacctcca 404
>gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 507
Score = 349 bits (176), Expect = 4e-094
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 137 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 196
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 197 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 256
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaa 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 257 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagtgtgaa 316
Query: 434 gggcaccattgagaggtacaagaaggcaaccagtgacaactcca 477
| |||||||||||||||||||||||| | |||||||| |||||
Sbjct: 317 gtccaccattgagaggtacaagaaggccaacagtgacacctcca 360
>gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809549, DNA
sequence
Length = 690
Score = 297 bits (150), Expect = 1e-078
Identities = 168/174 (96%)
Strand = Plus / Minus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 608 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 549
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 548 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 489
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 435
>gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 605
Score = 297 bits (150), Expect = 1e-078
Identities = 168/174 (96%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 356 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 415
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 416 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 475
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 529
>gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 620
Score = 297 bits (150), Expect = 1e-078
Identities = 168/174 (96%)
Strand = Plus / Minus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 318 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 259
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 258 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 199
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 145
>gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 611
Score = 297 bits (150), Expect = 1e-078
Identities = 168/174 (96%)
Strand = Plus / Minus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 461 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 402
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 401 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 342
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 288
>gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 654
Score = 297 bits (150), Expect = 1e-078
Identities = 168/174 (96%)
Strand = Plus / Plus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
|||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||
Sbjct: 340 gggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaa 399
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 400 gcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggt 459
Query: 374 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 513
>gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 496
Score = 272 bits (137), Expect = 8e-071
Identities = 182/197 (92%)
Strand = Plus / Plus
Query: 263 tgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaa 322
|||||||||| | |||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 122 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 181
Query: 323 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 382
||| ||||||||||||||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 182 cgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgaggtggccctcat 241
Query: 383 cgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccat 442
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 242 cgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaaggctacgat 301
Query: 443 tgagaggtacaagaagg 459
|||||||||||||||||
Sbjct: 302 tgagaggtacaagaagg 318
>gb|CW096871.1|CW096871 104_462_11002135_116_34348_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002135, DNA
sequence
Length = 736
Score = 268 bits (135), Expect = 1e-069
Identities = 165/175 (94%)
Strand = Plus / Minus
Query: 758 ggttgatgagaatgaaagggcacaacagacagcgaacatgatgggggcaccatcgacaag 817
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 590 ggttgatgagaatgaaagggcacaacagacagtgaacatgatgggggcgccatcgacaag 531
Query: 818 tgagtatcagcagcacggttttactccttatgatccaataaggagcttcctgcagttcaa 877
||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 530 tgattatcagcagcagggttttattccttatgacccaataaggagcttcctgcagttcaa 471
Query: 878 catcgtgcagcagcctcagttctattctcagcaggaggaccggaaagacttcaac 932
|||| |||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct: 470 catcatgcagcagcctcagttttactcccagcaggaggaccggaaagacttcaac 416
Score = 48.1 bits (24), Expect = 0.002
Identities = 61/70 (87%), Gaps = 5/70 (7%)
Strand = Plus / Minus
Query: 1006 agtgagaaact-gagctac---attactgtggaattatatgtaaagactagtactactgc 1061
||||||||||| ||||||| |||| |||| |||||||||| |||| ||||||||||||
Sbjct: 69 agtgagaaactggagctacattattagtgtgaaattatatgt-aagattagtactactgc 11
Query: 1062 ttcatatgtg 1071
||||| ||||
Sbjct: 10 ttcatgtgtg 1
>gb|CF758974.1|CF758974 DSAF1_38_G07.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_38_G07_A011 3', mRNA sequence
Length = 616
Score = 268 bits (135), Expect = 1e-069
Identities = 165/175 (94%)
Strand = Plus / Minus
Query: 758 ggttgatgagaatgaaagggcacaacagacagcgaacatgatgggggcaccatcgacaag 817
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 374 ggttgatgagaatgaaagggcacaacagacagtgaacatgatgggggcgccatcgacaag 315
Query: 818 tgagtatcagcagcacggttttactccttatgatccaataaggagcttcctgcagttcaa 877
||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 314 tgattatcagcagcagggttttattccttatgacccaataaggagcttcctgcagttcaa 255
Query: 878 catcgtgcagcagcctcagttctattctcagcaggaggaccggaaagacttcaac 932
|||| |||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct: 254 catcatgcagcagcctcagttttactcccagcaggaggaccggaaagacttcaac 200
Score = 81.8 bits (41), Expect = 2e-013
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 716 ggaaatggagttgcagaatgacaacttgtacttaaggagccgggt 760
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 558 ggaaatggagttgcagaatgacaacttgtacttaaggagcagggt 514
>gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 288
Score = 250 bits (126), Expect = 3e-064
Identities = 171/186 (91%)
Strand = Plus / Plus
Query: 263 tgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaa 322
|||||||||| | |||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 103 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 162
Query: 323 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 382
||| ||||||||||||||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 163 cgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgaggtggccctcat 222
Query: 383 cgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccat 442
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 223 cgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaaggctacgat 282
Query: 443 tgagag 448
||||||
Sbjct: 283 tgagag 288
>gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 295
Score = 248 bits (125), Expect = 1e-063
Identities = 161/173 (93%)
Strand = Plus / Plus
Query: 263 tgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaa 322
|||||||||| | |||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 116 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 175
Query: 323 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 382
||| ||||||||||||||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 176 cgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgaggtggccctcat 235
Query: 383 cgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagg 435
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 cgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagg 288
>gb|CL193546.1|CL193546 104_417_10941008_116_32282_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10941008, DNA
sequence
Length = 536
Score = 246 bits (124), Expect = 5e-063
Identities = 164/176 (93%), Gaps = 1/176 (0%)
Strand = Plus / Minus
Query: 758 ggttgatgagaatgaaagggcacaacagacagcgaacatgatgggggcaccatcgacaag 817
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 348 ggttgatgagaatgaaagggcacaacagacagtgaacatgatgggggcgccatcgacaag 289
Query: 818 tgagtatcagcagcacggttttactccttatgatccaataaggagcttcctgcagttcaa 877
||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||
Sbjct: 288 tgattatcagcagcagggttttattccttatgacccaataaggagcttcctgcagtttaa 229
Query: 878 catcgtgcagcagcctcag-ttctattctcagcaggaggaccggaaagacttcaac 932
|||| |||||||||||||| || || || |||||||||||||||||||||||||||
Sbjct: 228 catcatgcagcagcctcagtttgtactcccagcaggaggaccggaaagacttcaac 173
>gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809866, DNA
sequence
Length = 713
Score = 232 bits (117), Expect = 7e-059
Identities = 153/165 (92%)
Strand = Plus / Minus
Query: 263 tgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaa 322
|||||||||| | |||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 564 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 505
Query: 323 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 382
||| ||||||||||||||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 504 cgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgaggtggccctcat 445
Query: 383 cgtcttctccagccgcggccgcctctacgagtacgccaacaacag 427
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cgtcttctccagccgcggccgcctctacgagtacgccaacaacag 400
>gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10524173, DNA
sequence
Length = 470
Score = 232 bits (117), Expect = 7e-059
Identities = 153/165 (92%)
Strand = Plus / Minus
Query: 263 tgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaa 322
|||||||||| | |||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 312 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 253
Query: 323 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 382
||| ||||||||||||||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 252 cgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgaggtggccctcat 193
Query: 383 cgtcttctccagccgcggccgcctctacgagtacgccaacaacag 427
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cgtcttctccagccgcggccgcctctacgagtacgccaacaacag 148
>gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104678, DNA
sequence
Length = 621
Score = 232 bits (117), Expect = 7e-059
Identities = 153/165 (92%)
Strand = Plus / Minus
Query: 263 tgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaa 322
|||||||||| | |||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 433 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 374
Query: 323 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 382
||| ||||||||||||||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 373 cgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgaggtggccctcat 314
Query: 383 cgtcttctccagccgcggccgcctctacgagtacgccaacaacag 427
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cgtcttctccagccgcggccgcctctacgagtacgccaacaacag 269
>gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113875, DNA
sequence
Length = 660
Score = 232 bits (117), Expect = 7e-059
Identities = 153/165 (92%)
Strand = Plus / Minus
Query: 263 tgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaa 322
|||||||||| | |||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 589 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 530
Query: 323 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 382
||| ||||||||||||||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 529 cgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgaggtggccctcat 470
Query: 383 cgtcttctccagccgcggccgcctctacgagtacgccaacaacag 427
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cgtcttctccagccgcggccgcctctacgagtacgccaacaacag 425
>gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404091, DNA
sequence
Length = 618
Score = 232 bits (117), Expect = 7e-059
Identities = 153/165 (92%)
Strand = Plus / Minus
Query: 263 tgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaa 322
|||||||||| | |||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 562 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 503
Query: 323 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 382
||| ||||||||||||||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 502 cgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgaggtggccctcat 443
Query: 383 cgtcttctccagccgcggccgcctctacgagtacgccaacaacag 427
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cgtcttctccagccgcggccgcctctacgagtacgccaacaacag 398
>gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 475
Score = 208 bits (105), Expect = 1e-051
Identities = 126/133 (94%)
Strand = Plus / Plus
Query: 327 ctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtc 386
||||||||||||||||||||||||||||| || |||||||||||||| || |||||||||
Sbjct: 10 ctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgaggtggccctcatcgtc 69
Query: 387 ttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaagggcaccattgag 446
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 70 ttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaaggctacgattgag 129
Query: 447 aggtacaagaagg 459
|||||||||||||
Sbjct: 130 aggtacaagaagg 142
>gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 407
Score = 200 bits (101), Expect = 2e-049
Identities = 134/145 (92%)
Strand = Plus / Plus
Query: 270 aagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctc 329
||||| |||||||||| || |||| | ||||||||||||| ||||||||||||||||||
Sbjct: 69 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 128
Query: 330 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 129 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 188
Query: 390 tccagccgcggccgcctctacgagt 414
|||||||||||| ||||||||||
Sbjct: 189 tccagccgcggcaagctctacgagt 213
>gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 697
Score = 188 bits (95), Expect = 9e-046
Identities = 134/147 (91%)
Strand = Plus / Minus
Query: 268 tcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcc 327
||||||| |||||||||| || |||| | |||||||||||| |||||||||||||||||
Sbjct: 429 tcaagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacggcc 370
Query: 328 tcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtct 387
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 369 tgctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 310
Query: 388 tctccagccgcggccgcctctacgagt 414
|||||| ||||||| ||||||||||
Sbjct: 309 tctccaaccgcggcaagctctacgagt 283
>gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 716
Score = 188 bits (95), Expect = 9e-046
Identities = 134/147 (91%)
Strand = Plus / Plus
Query: 268 tcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcc 327
||||||| |||||||||| || |||| | |||||||||||| |||||||||||||||||
Sbjct: 488 tcaagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacggcc 547
Query: 328 tcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtct 387
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 548 tgctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 607
Query: 388 tctccagccgcggccgcctctacgagt 414
|||||| ||||||| ||||||||||
Sbjct: 608 tctccaaccgcggcaagctctacgagt 634
>gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i06, DNA
sequence
Length = 725
Score = 188 bits (95), Expect = 9e-046
Identities = 134/147 (91%)
Strand = Plus / Minus
Query: 268 tcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcc 327
||||||| |||||||||| || |||| | |||||||||||| |||||||||||||||||
Sbjct: 682 tcaagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacggcc 623
Query: 328 tcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtct 387
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 622 tgctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 563
Query: 388 tctccagccgcggccgcctctacgagt 414
|||||| ||||||| ||||||||||
Sbjct: 562 tctccaaccgcggcaagctctacgagt 536
>gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 561
Score = 188 bits (95), Expect = 9e-046
Identities = 134/147 (91%)
Strand = Plus / Plus
Query: 268 tcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcc 327
||||||| |||||||||| || |||| | |||||||||||| |||||||||||||||||
Sbjct: 65 tcaagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacggcc 124
Query: 328 tcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtct 387
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 125 tgctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 184
Query: 388 tctccagccgcggccgcctctacgagt 414
|||||| ||||||| ||||||||||
Sbjct: 185 tctccaaccgcggcaagctctacgagt 211
>gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 377
Score = 188 bits (95), Expect = 9e-046
Identities = 134/147 (91%)
Strand = Plus / Plus
Query: 268 tcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcc 327
||||||| |||||||||| || |||| | |||||||||||| |||||||||||||||||
Sbjct: 185 tcaagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacggcc 244
Query: 328 tcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtct 387
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 245 tgctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 304
Query: 388 tctccagccgcggccgcctctacgagt 414
|||||| ||||||| ||||||||||
Sbjct: 305 tctccaaccgcggcaagctctacgagt 331
>gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 188 bits (95), Expect = 9e-046
Identities = 134/147 (91%)
Strand = Plus / Plus
Query: 268 tcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcc 327
||||||| |||||||||| || |||| | |||||||||||| |||||||||||||||||
Sbjct: 181 tcaagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacggcc 240
Query: 328 tcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtct 387
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 241 tgctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 300
Query: 388 tctccagccgcggccgcctctacgagt 414
|||||| ||||||| ||||||||||
Sbjct: 301 tctccaaccgcggcaagctctacgagt 327
>gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 548
Score = 180 bits (91), Expect = 2e-043
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 268 tcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcc 327
||||||| |||||||||| || |||| | |||||||||||| |||||||||||||||||
Sbjct: 65 tcaagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacggcc 124
Query: 328 tcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtct 387
| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 125 tgctcaagaaagcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 184
Query: 388 tctccagccgcggccgcctctacgagt 414
|||||| ||||||| ||||||||||
Sbjct: 185 tctccaaccgcggcaagctctacgagt 211
>gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 682
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Minus
Query: 270 aagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctc 329
||||| |||||||||| || |||| | |||||||||||| ||||||||||||||| ||
Sbjct: 527 aagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacgggctg 468
Query: 330 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 467 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 408
Query: 390 tccagccgcggccgcctctacgagt 414
|||| ||||||| ||||||||||
Sbjct: 407 tccaaccgcggcaagctctacgagt 383
>gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 712
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Minus
Query: 270 aagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctc 329
||||| |||||||||| || |||| | |||||||||||| ||||||||||||||| ||
Sbjct: 527 aagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacgggctg 468
Query: 330 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 467 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 408
Query: 390 tccagccgcggccgcctctacgagt 414
|||| ||||||| ||||||||||
Sbjct: 407 tccaaccgcggcaagctctacgagt 383
>gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488020, DNA
sequence
Length = 575
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Minus
Query: 270 aagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctc 329
||||| |||||||||| || |||| | |||||||||||| ||||||||||||||| ||
Sbjct: 158 aagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacgggctg 99
Query: 330 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 98 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 39
Query: 390 tccagccgcggccgcctctacgagt 414
|||| ||||||| ||||||||||
Sbjct: 38 tccaaccgcggcaagctctacgagt 14
>gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 440
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 270 aagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctc 329
||||| |||||||||| || |||| | |||||||||||| ||||||||||||||| ||
Sbjct: 210 aagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacgggctg 269
Query: 330 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 270 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 329
Query: 390 tccagccgcggccgcctctacgagt 414
|||| ||||||| ||||||||||
Sbjct: 330 tccaaccgcggcaagctctacgagt 354
>gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 509
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 270 aagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctc 329
||||| |||||||||| || |||| | |||||||||||| ||||||||||||||| ||
Sbjct: 207 aagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacgggctg 266
Query: 330 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 267 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 326
Query: 390 tccagccgcggccgcctctacgagt 414
|||| ||||||| ||||||||||
Sbjct: 327 tccaaccgcggcaagctctacgagt 351
>gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription factor SbMADS1 mRNA,
complete cds
Length = 1055
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 270 aagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaagcgccgcaacggcctc 329
||||| |||||||||| || |||| | |||||||||||| ||||||||||||||| ||
Sbjct: 70 aagcggatcgagaacaagatcaaccgccaggtcaccttcgccaagcgccgcaacgggctg 129
Query: 330 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 130 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 189
Query: 390 tccagccgcggccgcctctacgagt 414
|||| ||||||| ||||||||||
Sbjct: 190 tccaaccgcggcaagctctacgagt 214
>gb|CW407708.1|CW407708 fsbb001f101e21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101e21, DNA
sequence
Length = 732
Score = 167 bits (84), Expect = 3e-039
Identities = 99/104 (95%)
Strand = Plus / Minus
Query: 311 caagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccga 370
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 caagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcgacgccga 672
Query: 371 ggtcgcgctcatcgtcttctccagccgcggccgcctctacgagt 414
||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 671 ggtcgcgctcatcatcttctccagccgcggcaagctctacgagt 628
>gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155545, DNA
sequence
Length = 655
Score = 163 bits (82), Expect = 5e-038
Identities = 124/138 (89%)
Strand = Plus / Minus
Query: 254 gggcaagactgagatcaagcgcatcgagaacacgaccaacaggcaggtcaccttctgcaa 313
||||||||| |||| ||||| || |||||| |||||| | | ||||||||||||| |||
Sbjct: 635 gggcaagacgcagatgaagcggatagagaacgcgaccagccgccaggtcaccttctccaa 576
Query: 314 gcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggt 373
||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 575 gcgccgcaacggcctgctcaagaaggcgttcgagctctccgtcctctgcgacgccgaggt 516
Query: 374 cgcgctcatcgtcttctc 391
||||||| ||||||||||
Sbjct: 515 cgcgctcgtcgtcttctc 498
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 395,144
Number of Sequences: 832831
Number of extensions: 395144
Number of successful extensions: 117886
Number of sequences better than 0.5: 198
Number of HSP's better than 0.5 without gapping: 197
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 117503
Number of HSP's gapped (non-prelim): 321
length of query: 1354
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1334
effective length of database: 474,703,049
effective search space: 633253867366
effective search space used: 633253867366
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)