BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2623104.2.3
(1540 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum b... 934 0.0
gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorgh... 908 0.0
gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorgh... 892 0.0
gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum b... 837 0.0
gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorgh... 833 0.0
gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorgh... 827 0.0
gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorgh... 815 0.0
gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum b... 811 0.0
gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorgh... 807 0.0
gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum b... 803 0.0
gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorgh... 795 0.0
gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum b... 787 0.0
gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorgh... 777 0.0
gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum b... 777 0.0
gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum b... 753 0.0
gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum b... 751 0.0
gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum b... 749 0.0
gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum b... 737 0.0
gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum b... 726 0.0
gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum b... 718 0.0
gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum b... 700 0.0
gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum b... 680 0.0
gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum b... 676 0.0
gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorgh... 666 0.0
gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorgh... 644 0.0
gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum b... 642 0.0
gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation... 640 0.0
gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum b... 626 e-177
gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sor... 624 e-177
gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum b... 611 e-173
gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum b... 607 e-171
gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum b... 603 e-170
gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sor... 589 e-166
gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum b... 585 e-165
gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum b... 583 e-164
gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum b... 579 e-163
gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum b... 579 e-163
gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum b... 579 e-163
gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorgh... 547 e-153
gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorgh... 515 e-144
gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation... 511 e-143
gb|CF484989.1|CF484989 POL1_28_F08.g1_A002 Pollen Sorghum b... 505 e-141
gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorgh... 500 e-139
gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum b... 492 e-137
gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) So... 486 e-135
gb|CF486235.1|CF486235 POL1_36_C04.g1_A002 Pollen Sorghum b... 476 e-132
gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methy... 472 e-131
gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum b... 466 e-129
gb|CF481701.1|CF481701 POL1_73_B09.g1_A002 Pollen Sorghum b... 456 e-126
gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum b... 448 e-124
gb|BG239833.1|BG239833 OV1_29_F03.g1_A002 Ovary 1 (OV1) Sor... 440 e-121
gb|BG240402.1|BG240402 OV1_29_F03.b1_A002 Ovary 1 (OV1) Sor... 440 e-121
gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) So... 438 e-121
gb|CF486155.1|CF486155 POL1_36_C04.b1_A002 Pollen Sorghum b... 432 e-119
gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum b... 426 e-117
gb|CF485486.1|CF485486 POL1_31_G04.g1_A002 Pollen Sorghum b... 426 e-117
gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-dig... 416 e-114
gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum b... 379 e-103
gb|CF481307.1|CF481307 POL1_71_E06.b1_A002 Pollen Sorghum b... 367 2e-099
gb|CF485402.1|CF485402 POL1_31_G04.b1_A002 Pollen Sorghum b... 359 5e-097
gb|CF489359.1|CF489359 POL1_57_D04.b1_A002 Pollen Sorghum b... 357 2e-096
gb|CF488593.1|CF488593 POL1_51_A10.b1_A002 Pollen Sorghum b... 355 8e-096
gb|CF487982.1|CF487982 POL1_47_C02.b1_A002 Pollen Sorghum b... 353 3e-095
gb|CF481975.1|CF481975 POL1_75_D02.g1_A002 Pollen Sorghum b... 345 8e-093
gb|CW463314.1|CW463314 fsbb001f211n16f0 Sorghum methylation... 343 3e-092
gb|CF481930.1|CF481930 POL1_75_E11.b1_A002 Pollen Sorghum b... 341 1e-091
gb|CF481619.1|CF481619 POL1_73_B09.b1_A002 Pollen Sorghum b... 337 2e-090
gb|CF490094.1|CF490094 POL1_62_A05.g1_A002 Pollen Sorghum b... 337 2e-090
gb|CF480663.1|CF480663 POL1_67_D09.b1_A002 Pollen Sorghum b... 335 7e-090
gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorgh... 327 2e-087
gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum b... 327 2e-087
gb|CF481916.1|CF481916 POL1_75_D02.b1_A002 Pollen Sorghum b... 323 3e-086
gb|CF486365.1|CF486365 POL1_37_F12.b1_A002 Pollen Sorghum b... 323 3e-086
gb|CF482926.1|CF482926 POL1_10_C07.b1_A002 Pollen Sorghum b... 319 4e-085
gb|CW197885.1|CW197885 104_622_11181920_148_36831_026 Sorgh... 313 3e-083
gb|BZ422208.1|BZ422208 id51a01.b1 WGS-SbicolorF (DH5a methy... 299 4e-079
gb|BG323126.1|BG323126 EM1_15_B11.g1_A002 Embryo 1 (EM1) So... 299 4e-079
gb|CF483278.1|CF483278 POL1_21_D07.b1_A002 Pollen Sorghum b... 299 4e-079
gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorgh... 295 6e-078
gb|CL165003.1|CL165003 104_359_10808294_116_31817_278 Sorgh... 289 4e-076
gb|CF489718.1|CF489718 POL1_59_F04.b1_A002 Pollen Sorghum b... 281 9e-074
gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum b... 278 1e-072
gb|CF481922.1|CF481922 POL1_75_D09.b1_A002 Pollen Sorghum b... 230 3e-058
gb|CF480280.1|CF480280 POL1_64_G01.g1_A002 Pollen Sorghum b... 220 3e-055
gb|CF488327.1|CF488327 POL1_49_E07.b1_A002 Pollen Sorghum b... 170 2e-040
gb|CW241737.1|CW241737 104_701_11218937_116_37555_079 Sorgh... 163 6e-038
gb|CF481907.1|CF481907 POL1_75_C02.b1_A002 Pollen Sorghum b... 161 2e-037
gb|CW279013.1|CW279013 104_753_11406855_116_35427_054 Sorgh... 153 6e-035
gb|CW279015.1|CW279015 104_753_11406856_116_35428_054 Sorgh... 153 6e-035
gb|CW197884.1|CW197884 104_622_11181920_116_36832_026 Sorgh... 151 2e-034
gb|BG048519.1|BG048519 OV1_14_E10.g2_A002 Ovary 1 (OV1) Sor... 151 2e-034
gb|BG048591.1|BG048591 OV1_14_E10.b1_A002 Ovary 1 (OV1) Sor... 151 2e-034
gb|CF481314.1|CF481314 POL1_71_F02.b1_A002 Pollen Sorghum b... 151 2e-034
gb|CF484442.1|CF484442 POL1_25_H01.b1_A002 Pollen Sorghum b... 151 2e-034
gb|CF488802.1|CF488802 POL1_52_G02.b1_A002 Pollen Sorghum b... 147 4e-033
gb|CF482113.1|CF482113 POL1_76_F02.g1_A002 Pollen Sorghum b... 129 8e-028
gb|CW271206.1|CW271206 104_743_11402872_148_35345_060 Sorgh... 115 1e-023
gb|BG355623.1|BG355623 EM1_16_B04.g1_A002 Embryo 1 (EM1) So... 105 1e-020
gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorgh... 92 2e-016
gb|CW323758.1|CW323758 104_818_11476800_116_35905_096 Sorgh... 92 2e-016
gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorgh... 92 2e-016
gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorgh... 92 2e-016
gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorgh... 80 7e-013
gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorgh... 80 7e-013
gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorgh... 80 7e-013
gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum m... 80 7e-013
gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorgh... 80 7e-013
gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorgh... 80 7e-013
gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation... 80 7e-013
gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation... 78 3e-012
gb|CW217188.1|CW217188 104_650_11195523_116_37129_010 Sorgh... 74 4e-011
gb|CF484715.1|CF484715 POL1_27_B10.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CL149388.1|CL149388 104_330_10777794_116_31354_114 Sorgh... 60 6e-007
gb|CW299046.1|CW299046 104_781_11462903_116_35658_082 Sorgh... 60 6e-007
gb|CW299047.1|CW299047 104_781_11462903_148_35654_082 Sorgh... 60 6e-007
gb|CW328718.1|CW328718 104_825_11479460_116_36003_080 Sorgh... 60 6e-007
gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorgh... 60 6e-007
gb|CW346335.1|CW346335 104_849_11488970_116_36220_003 Sorgh... 60 6e-007
gb|CW346939.1|CW346939 fsbb001f006k08f0 Sorghum methylation... 60 6e-007
gb|CW346940.1|CW346940 fsbb001f006k08k0 Sorghum methylation... 60 6e-007
gb|CW406842.1|CW406842 fsbb001f100a22f0 Sorghum methylation... 60 6e-007
gb|CW461512.1|CW461512 fsbb001f209d11f0 Sorghum methylation... 60 6e-007
gb|BG239969.1|BG239969 OV1_31_D01.g1_A002 Ovary 1 (OV1) Sor... 60 6e-007
gb|BG240550.1|BG240550 OV1_31_D01.b1_A002 Ovary 1 (OV1) Sor... 60 6e-007
gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) So... 60 6e-007
gb|BG739541.1|BG739541 EM1_82_B09.b1_A002 Embryo 1 (EM1) So... 60 6e-007
gb|CF483069.1|CF483069 POL1_11_C05.b1_A002 Pollen Sorghum b... 60 6e-007
gb|CW789407.1|CW789407 SP__Ba0057J16.r SP__Ba Sorghum propi... 58 3e-006
gb|CW208653.1|CW208653 104_638_11188789_148_36982_059 Sorgh... 56 1e-005
gb|CW233309.1|CW233309 104_686_11213332_148_37371_008 Sorgh... 56 1e-005
gb|CW421378.1|CW421378 fsbb001f130c19k0 Sorghum methylation... 56 1e-005
gb|CW470062.1|CW470062 fsbb001f223b09f0 Sorghum methylation... 56 1e-005
gb|BZ422085.1|BZ422085 id49d07.b1 WGS-SbicolorF (DH5a methy... 54 4e-005
gb|CL196650.1|CL196650 104_423_10943198_114_32326_063 Sorgh... 54 4e-005
gb|CL196651.1|CL196651 104_423_10943198_116_32330_063 Sorgh... 54 4e-005
gb|CW039367.1|CW039367 104_272_10505460_115_30390 Sorghum m... 54 4e-005
gb|CW097817.1|CW097817 104_464_11002670_148_34365_061 Sorgh... 54 4e-005
gb|CW245686.1|CW245686 104_706_11221077_148_35074_085 Sorgh... 54 4e-005
gb|CW245687.1|CW245687 104_706_11221077_148_37594_085 Sorgh... 54 4e-005
gb|CW260257.1|CW260257 104_726_11228865_148_35188_033 Sorgh... 54 4e-005
gb|BG357591.1|BG357591 OV2_31_G11.g1_A002 Ovary 2 (OV2) Sor... 52 2e-004
gb|CW036659.1|CW036659 104_268_10503899_114_30381 Sorghum m... 50 6e-004
gb|CW039366.1|CW039366 104_272_10505460_114_30389 Sorghum m... 48 0.002
gb|CW086368.1|CW086368 104_430_10946932_116_33018_012 Sorgh... 48 0.002
gb|CW133225.1|CW133225 104_516_11116645_116_34806_049 Sorgh... 48 0.002
gb|CW232351.1|CW232351 104_685_11212772_148_37363_080 Sorgh... 48 0.002
gb|CW319700.1|CW319700 104_812_11474625_148_35892_041 Sorgh... 48 0.002
gb|CW320260.1|CW320260 104_813_11474922_116_35901_077 Sorgh... 48 0.002
gb|CW320261.1|CW320261 104_813_11474922_148_35897_077 Sorgh... 48 0.002
gb|CW469589.1|CW469589 fsbb001f222g06f0 Sorghum methylation... 48 0.002
gb|BI098442.1|BI098442 IP1_32_D12.b1_A002 Immature pannicle... 48 0.002
gb|CF482303.1|CF482303 POL1_6_D06.b1_A002 Pollen Sorghum bi... 48 0.002
gb|CL191437.1|CL191437 104_410_10906802_116_32537_007 Sorgh... 46 0.010
gb|CW181409.1|CW181409 104_596_11163492_116_36654_042 Sorgh... 46 0.010
gb|CW237483.1|CW237483 104_693_11216193_148_37517_033 Sorgh... 46 0.010
gb|CW369343.1|CW369343 fsbb001f043l11k0 Sorghum methylation... 46 0.010
gb|CW390139.1|CW390139 fsbb001f075k21k0 Sorghum methylation... 46 0.010
gb|BF587798.1|BF587798 FM1_40_F09.g1_A003 Floral-Induced Me... 46 0.010
gb|CF484792.1|CF484792 POL1_27_B10.g1_A002 Pollen Sorghum b... 46 0.010
gb|CW032166.1|CW032166 104_261_10501225_114_30363 Sorghum m... 44 0.038
gb|CW264408.1|CW264408 104_733_11231276_116_35256_078 Sorgh... 44 0.038
gb|CW394746.1|CW394746 fsbb001f082h21k0 Sorghum methylation... 44 0.038
gb|CW412966.1|CW412966 fsbb001f108o03f0 Sorghum methylation... 44 0.038
gb|CL175907.1|CL175907 104_381_10892772_116_31765_372 Sorgh... 42 0.15
gb|CW050592.1|CW050592 104_290_10514748_115_30205 Sorghum m... 42 0.15
gb|CW054380.1|CW054380 104_295_10516495_114_30181 Sorghum m... 42 0.15
gb|CW102281.1|CW102281 104_470_11011256_148_34413_024 Sorgh... 42 0.15
gb|CW145709.1|CW145709 104_538_11138608_148_34981_058 Sorgh... 42 0.15
gb|CW189447.1|CW189447 104_610_11173970_116_37100_003 Sorgh... 42 0.15
gb|CW191730.1|CW191730 104_613_11178652_116_36942_002 Sorgh... 42 0.15
gb|CW194526.1|CW194526 104_617_11180143_116_36787_020 Sorgh... 42 0.15
gb|CW194527.1|CW194527 104_617_11180143_148_36791_020 Sorgh... 42 0.15
gb|CW194908.1|CW194908 104_618_11180352_148_36800_092 Sorgh... 42 0.15
gb|CW231978.1|CW231978 104_681_11211414_116_37346_023 Sorgh... 42 0.15
gb|CW231979.1|CW231979 104_681_11211414_148_37350_023 Sorgh... 42 0.15
gb|CW319220.1|CW319220 104_811_11474368_116_35879_052 Sorgh... 42 0.15
gb|CW328958.1|CW328958 104_825_11479582_148_36001_091 Sorgh... 42 0.15
gb|CW361386.1|CW361386 fsbb001f029o24k0 Sorghum methylation... 42 0.15
gb|CW473599.1|CW473599 fsbb001f229a17k0 Sorghum methylation... 42 0.15
>gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 5', mRNA sequence
Length = 692
Score = 934 bits (471), Expect = 0.0
Identities = 641/698 (91%), Gaps = 6/698 (0%)
Strand = Plus / Plus
Query: 259 cctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggcccatgcaaggg 318
||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1 cctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccgtgcaaggg 60
Query: 319 cgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagccagtacaa 378
||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct: 61 cgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagccagtacaa 120
Query: 379 ggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcaccggcaaggg 438
|| |||| ||||||||||| || || ||||||||||| || ||||||||||||||
Sbjct: 121 gg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcaccggcaaggg 174
Query: 439 aaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaagaagtacga 498
||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||||
Sbjct: 175 gaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaagaagtacga 234
Query: 499 ctgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggaggtgtccgg 558
|||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 235 ctgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggaggtgtccgg 294
Query: 559 gatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaaggacatgct 618
|||||||||||| ||| |||||||||||||||||||| ||| | |||||||||||||| |
Sbjct: 295 gatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaaggacatgtt 354
Query: 619 gatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggcatccacat 678
||| ||||| || | || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggcatccacat 414
Query: 679 gggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgacgactgcat 738
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 415 gggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgacgactgcat 474
Query: 739 ctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccccggcca 798
|||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||
Sbjct: 475 ctccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggcca 534
Query: 799 cggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggatatcaa 858
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 535 tggcatcagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaa 594
Query: 859 cgtcaaggactgcacgcttaagaagacggccaacggcgtccgcatcaaggcgtatgagga 918
||| |||||||| ||||| ||||||||| ||||||| |||| ||||||||||| |||||
Sbjct: 595 cgtgaaggactgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacgagga 654
Query: 919 cgccgcctccgtgctcaccgcctccaagatccactatg 956
||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cgccgcctccgtgctcaccgcctccaagatccactatg 692
>gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402872, DNA
sequence
Length = 709
Score = 908 bits (458), Expect = 0.0
Identities = 643/702 (91%), Gaps = 2/702 (0%)
Strand = Plus / Plus
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||
Sbjct: 9 atcaccggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgc 68
Query: 485 gtcaagaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaac 544
| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 69 gccaagaagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaac 128
Query: 545 ggggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaag 604
|||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||
Sbjct: 129 ggggaggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccag 188
Query: 605 tgcaaggacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacg 664
|||||||||||| |||| ||||| || | || |||||||||||||||||||||||||||
Sbjct: 189 tgcaaggacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacg 248
Query: 665 gacggcatccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtc 724
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 249 gacggcatccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtc 308
Query: 725 ggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacc 784
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 309 ggcgacgactgcatctccatcggccccgggacaaccaaggtgaacatcaccggcgtcaca 368
Query: 785 tgcggccccggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggac 844
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 369 tgcggccccggccatggcatcagcatcggcagcctggggcggtacaaggacgagaaggac 428
Query: 845 gtcacggatatcaacgtcaaggactgcacgcttaagaagacggccaacggcgtccgcatc 904
|||||||| |||||||| |||||||| ||||| ||||||||| ||||||| |||| |||
Sbjct: 429 gtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaacggcctccggatc 488
Query: 905 aaggcgtatgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaatatc 964
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 489 aaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaacatc 548
Query: 965 aagatggaggactcgggctaccccatcatcatcgacatgaagtactgccccaacaagtta 1024
||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 549 aagatggaggactcgtcgaaccccattatcatcgacatgaagtactgccctaacaaaatc 608
Query: 1025 tgcaccgccaatggtgcctccaaggtca-ccgtcaaggacgtcaccttcaagaacatcac 1083
|||||||||| || ||||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 609 tgcaccgccagcggcgcctccaaggtcacccgtc-aggacgtctccttcaagaacgtcac 667
Query: 1084 cggcacctcctccaccccggaggccgtcaacctgctctgctc 1125
|||||||||| ||| ||| |||||||||| ||||||||||||
Sbjct: 668 cggcacctccgccagccccgaggccgtcagcctgctctgctc 709
>gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 701
Score = 892 bits (450), Expect = 0.0
Identities = 629/689 (91%), Gaps = 6/689 (0%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 16 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 75
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 76 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 135
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 136 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 195
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 196 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 255
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 256 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 309
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 310 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 369
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 370 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 429
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 430 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 489
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 490 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 549
Query: 671 atccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgac 730
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 550 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 609
Query: 731 gactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggc 790
|||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||
Sbjct: 610 gactgcatctccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggc 669
Query: 791 cccggccacggcatcagcatcggcagcct 819
||||| || ||||||||||||||||||||
Sbjct: 670 cccgggcatggcatcagcatcggcagcct 698
>gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 5', mRNA sequence
Length = 715
Score = 837 bits (422), Expect = 0.0
Identities = 571/621 (91%), Gaps = 6/621 (0%)
Strand = Plus / Plus
Query: 197 agcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaagcagacg 256
||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct: 101 agcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaagcagacg 160
Query: 257 atcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggcccatgcaag 316
||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||||
Sbjct: 161 atcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccgtgcaag 220
Query: 317 ggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagccagtac 376
||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||
Sbjct: 221 ggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagccagtac 280
Query: 377 aaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcaccggcaag 436
|||| |||| ||||||||||| || || ||||||||||| || ||||||||||||
Sbjct: 281 aagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcaccggcaag 334
Query: 437 ggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaagaagtac 496
|| ||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||
Sbjct: 335 gggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaagaagtac 394
Query: 497 gactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggaggtgtcc 556
|||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 395 gactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggaggtgtcc 454
Query: 557 gggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaaggacatg 616
|||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 455 gggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaaggacatg 514
Query: 617 ctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggcatccac 676
|||| ||||| || | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggcatccac 574
Query: 677 atgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgacgactgc 736
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 575 atgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgacgactgc 634
Query: 737 atctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccccggc 796
|||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||
Sbjct: 635 atctccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggc 694
Query: 797 cacggcatcagcatcggcagc 817
|| ||||||||||||||||||
Sbjct: 695 catggcatcagcatcggcagc 715
>gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 641
Score = 833 bits (420), Expect = 0.0
Identities = 590/647 (91%), Gaps = 6/647 (0%)
Strand = Plus / Minus
Query: 186 gcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccg 245
|||||| ||| ||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 641 gcaagaaggacagcacgaaggctgtgcaggaggcatgaacgtcggcgtgcggcggcaccg 582
Query: 246 ggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacag 305
|||||||||||||||||||||| |||||||| | |||||| ||||||||||||||||| |
Sbjct: 581 ggaagcagacgatcctcatccctaagggcgaatacctcgtgggaccactcaacttcaccg 522
Query: 306 gcccatgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacc 365
|||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 521 gcccgagcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacc 462
Query: 366 taagccagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtca 425
| ||||||||||||| |||| ||||||||||| || || ||||||||||| || |
Sbjct: 461 tgagccagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtga 408
Query: 426 tcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcg 485
||||||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||
Sbjct: 407 tcaccggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcg 348
Query: 486 tcaagaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacg 545
|||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||
Sbjct: 347 ccaagaagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacg 288
Query: 546 gggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagt 605
||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| | |||
Sbjct: 287 gggaggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagt 228
Query: 606 gcaaggacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacgg 665
||||||||||| |||| ||||| || | || ||||||||||||||||||||||||||||
Sbjct: 227 gcaaggacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacgg 168
Query: 666 acggcatccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcg 725
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 167 acggcatccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcg 108
Query: 726 gcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacct 785
||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |
Sbjct: 107 gcgacgactgcatctccatcggccccgggacaaccaaggtgaacatcaccggcgtcacat 48
Query: 786 gcggccccggccacggcatcagcatcggcagcctagggcggtacaag 832
||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 47 gcggccccggccatggcatcagcatcggcagcctggggcggtacaag 1
>gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476800, DNA
sequence
Length = 622
Score = 827 bits (417), Expect = 0.0
Identities = 572/624 (91%), Gaps = 6/624 (0%)
Strand = Plus / Minus
Query: 185 ggcaagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcacc 244
||||||| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 618 ggcaagaaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcacc 559
Query: 245 gggaagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcaca 304
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 558 gggaagcagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcacc 499
Query: 305 ggcccatgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggac 364
||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 498 ggcccgtgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggac 439
Query: 365 ctaagccagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtc 424
|| ||||||||||||| |||| ||||||||||| || || ||||||||||| ||
Sbjct: 438 ctgagccagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtg 385
Query: 425 atcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgc 484
|||||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||
Sbjct: 384 atcaccggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgc 325
Query: 485 gtcaagaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaac 544
| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 324 gccaagaagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaac 265
Query: 545 ggggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaag 604
|||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||
Sbjct: 264 ggggaggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccag 205
Query: 605 tgcaaggacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacg 664
|||||||||||| |||| ||||| || | || |||||||||||||||||||||||||||
Sbjct: 204 tgcaaggacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacg 145
Query: 665 gacggcatccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtc 724
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 144 gacggcatccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtc 85
Query: 725 ggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacc 784
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 84 ggcgacgactgcatctccatcggccccgggacaaccaaggtgaacatcaccggcgtcaca 25
Query: 785 tgcggccccggccacggcatcagc 808
|||||||||||||| |||||||||
Sbjct: 24 tgcggccccggccatggcatcagc 1
>gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470780, DNA
sequence
Length = 675
Score = 815 bits (411), Expect = 0.0
Identities = 572/626 (91%), Gaps = 6/626 (0%)
Strand = Plus / Minus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 622 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 563
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 562 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 503
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 502 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 443
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 442 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 383
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 382 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 329
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 328 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 269
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 268 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 209
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 208 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 149
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 148 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 89
Query: 671 atccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgac 730
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 88 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 29
Query: 731 gactgcatctccatcggccccgggac 756
||||||||||||||||||||||||||
Sbjct: 28 gactgcatctccatcggccccgggac 3
>gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_B02_A002 5', mRNA sequence
Length = 733
Score = 811 bits (409), Expect = 0.0
Identities = 570/624 (91%), Gaps = 6/624 (0%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 116 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 175
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 176 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 235
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 236 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 295
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 296 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 355
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 356 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 409
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 410 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 469
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 470 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 529
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 530 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 589
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 590 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 649
Query: 671 atccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgac 730
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 650 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 709
Query: 731 gactgcatctccatcggccccggg 754
||||||||||||||||||||||||
Sbjct: 710 gactgcatctccatcggccccggg 733
>gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218937, DNA
sequence
Length = 656
Score = 807 bits (407), Expect = 0.0
Identities = 593/655 (90%)
Strand = Plus / Plus
Query: 578 aagttcttccacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatgtg 637
|||||||||||||||||| ||| | |||||||||||||| |||| ||||| || | ||
Sbjct: 1 aagttcttccacatgaacgtgttccagtgcaaggacatgttgattaaggatgtgacggtc 60
Query: 638 acggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtc 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtc 120
Query: 698 accatcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacc 757
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accatcgagaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggaca 180
Query: 758 tccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagc 817
|||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 181 accaaggtgaacatcaccggcgtcacatgcggccccggccatggcatcagcatcggcagc 240
Query: 818 ctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgctt 877
|| |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct: 241 ctggggcggtacaaggacgagaaggacgtcacggacatcaacgtgaaggactgtacgctg 300
Query: 878 aagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctcacc 937
||||||||| ||||||| |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 301 aagaagacgagcaacggcctccggatcaaggcgtacgaggacgccgcctccgtgctcacc 360
Query: 938 gcctccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatcatc 997
||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||
Sbjct: 361 gcctccaagatccactatgagaacatcaagatggaggactcgtcgaaccccattatcatc 420
Query: 998 gacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccgtc 1057
||||||||||||||||| ||||| | |||||||||| || ||||||||||||||||||
Sbjct: 421 gacatgaagtactgccctaacaaaatctgcaccgccagcggcgcctccaaggtcaccgtc 480
Query: 1058 aaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacctg 1117
||||||||| ||||||||||| |||||||||||||| ||| ||| |||||||||| ||||
Sbjct: 481 aaggacgtctccttcaagaacgtcaccggcacctccgccagccccgaggccgtcagcctg 540
Query: 1118 ctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagtac 1177
|||||||| | ||||||||| ||||| |||||||||||||| ||||||| || | |||
Sbjct: 541 ctctgctccgacaagatcccctgcactggcgtcaccatggataacgtcaaggtcgaatac 600
Query: 1178 agtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagcgcca 1232
||||||| |||||||||||||||||||||||| | ||||| |||||||||||||
Sbjct: 601 agtggcaaaaacaacaagaccatggccgtatgccaaaacgccaagggcagcgcca 655
>gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 5', mRNA sequence
Length = 742
Score = 803 bits (405), Expect = 0.0
Identities = 569/624 (91%), Gaps = 6/624 (0%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 125 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 184
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | |||||| |||||||||||||||||
Sbjct: 185 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgcgcggcggcaccgggaag 244
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 245 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 304
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 305 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 364
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 365 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 418
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 419 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 478
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 479 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 538
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 539 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 598
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 599 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 658
Query: 671 atccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgac 730
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 659 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 718
Query: 731 gactgcatctccatcggccccggg 754
||||||||||||||||||||||||
Sbjct: 719 gactgcatctccatcggccccggg 742
>gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 614
Score = 795 bits (401), Expect = 0.0
Identities = 565/620 (91%), Gaps = 6/620 (0%)
Strand = Plus / Minus
Query: 300 tcacaggcccatgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgacca 359
|||| ||||| ||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 614 tcaccggcccgtgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgacca 555
Query: 360 cggacctaagccagtacaaggatcatggtaattggatcgagattctacgcgtggacaacc 419
||||||| ||||||||||||| |||| ||||||||||| || || ||||||||||
Sbjct: 554 cggacctgagccagtacaagg------gtaactggatcgagatcctgcgtgtggacaacc 501
Query: 420 ttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaact 479
| || |||||||||||||| ||||||||||||||||| || |||||||||||||||||||
Sbjct: 500 tggtgatcaccggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaact 441
Query: 480 cctgcgtcaagaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtga 539
| |||| |||||||||||||||||||||||| ||||||||||||||| |||||| |||||
Sbjct: 440 cgtgcgccaagaagtacgactgcaagatcctgcccaactcgctggtgctggactacgtga 381
Query: 540 acaacggggaggtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgt 599
||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||
Sbjct: 380 acaacggggaggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgt 321
Query: 600 acaagtgcaaggacatgctgatcaaggacgtcaatgtgacggcgcccggggacagcccca 659
| |||||||||||||| |||| ||||| || | || ||||||||||||||||||||||
Sbjct: 320 tccagtgcaaggacatgttgattaaggatgtgacggtcacggcgcccggggacagcccca 261
Query: 660 acacggacggcatccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcg 719
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 260 acacggacggcatccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcg 201
Query: 720 gcgtcggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcg 779
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 200 gcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtgaacatcaccggcg 141
Query: 780 tgacctgcggccccggccacggcatcagcatcggcagcctagggcggtacaaggacgaga 839
| || |||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 140 tcacatgcggccccggccatggcatcagcatcggcagcctggggcggtacaaggacgaga 81
Query: 840 aggacgtcacggatatcaacgtcaaggactgcacgcttaagaagacggccaacggcgtcc 899
||||||||||||| |||||||| |||||||| ||||| ||||||||| ||||||| |||
Sbjct: 80 aggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaacggcctcc 21
Query: 900 gcatcaaggcgtatgaggac 919
| ||||||||||| ||||||
Sbjct: 20 ggatcaaggcgtacgaggac 1
>gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 5', mRNA sequence
Length = 691
Score = 787 bits (397), Expect = 0.0
Identities = 544/592 (91%), Gaps = 7/592 (1%)
Strand = Plus / Plus
Query: 227 tcggcgtgcggcggcaccgggaagcagacgatcctcatccccaagggcgacttcctcgtc 286
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 105 tcggcgtgcggcggcaccgggaagcagacgatcctcatccctaagggcgactacctcgtc 164
Query: 287 ggaccactcaacttcacaggcccatgcaagggcgacgtgaccatccaggtgaatggcaat 346
||||||||||||||||| ||||| ||||||||||||||||||||||||||| | ||||||
Sbjct: 165 ggaccactcaacttcaccggcccgtgcaagggcgacgtgaccatccaggtggacggcaat 224
Query: 347 ctgctggcgaccacggacctaagccagtacaaggatcatggtaattggatcgagattcta 406
|||||||||||||||||||| ||||||||||||| |||| ||||||||||| ||
Sbjct: 225 ctgctggcgaccacggacctgagccagtacaagg------gtaactggatcgagatcctg 278
Query: 407 cgcgtggacaaccttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtg 466
|| ||||||||||| || |||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 279 cgtgtggacaacctggtgatcaccggcaaggggaagctcgacgggcagggccccgccgtg 338
Query: 467 tggagcaagaactcctgcgtcaagaagtacgactgcaagatccttcccaactcgctggtg 526
|||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 339 tggagcaagaactcgtgcgccaagaagtacgactgcaagatcctgcccaactcgctggtg 398
Query: 527 atggacttcgtgaacaacggggaggtgtccgggatcacgctgctcaactccaagttcttc 586
|||||| |||||| ||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 399 ctggactacgtgaa-aacggggaggtgtccgggatcacgctgctaaacgccaagttcttc 457
Query: 587 cacatgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatgtgacggcgccc 646
||||||||| ||| | |||||||||||||| |||| ||||| || | || |||||||||
Sbjct: 458 cacatgaacgtgttccagtgcaaggacatgttgattaaggatgtgacggtcacggcgccc 517
Query: 647 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcacc 706
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcgag 577
Query: 707 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 766
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 578 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtg 637
Query: 767 aacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcc 818
|||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 638 aacatcaccggcgtcacatgcggccccggccatggcatcagcatcggcagcc 689
>gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 725
Score = 777 bits (392), Expect = 0.0
Identities = 553/607 (91%), Gaps = 6/607 (0%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 125 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 184
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 185 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 244
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 245 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 304
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 305 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 364
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 365 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 418
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 419 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 478
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 479 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 538
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 539 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 598
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 599 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 658
Query: 671 atccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgac 730
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 659 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 718
Query: 731 gactgca 737
|||||||
Sbjct: 719 gactgca 725
>gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_E07_A002 5', mRNA sequence
Length = 699
Score = 777 bits (392), Expect = 0.0
Identities = 559/615 (90%), Gaps = 6/615 (0%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 91 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 150
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 151 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 210
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||| ||| |||||||||| ||||||| |||||||||||||||| |||||
Sbjct: 211 cagacgatcctcacccctaagggcgactacctcgtctgaccactcaacttcaccggcccg 270
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 271 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 330
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 331 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 384
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 385 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 444
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 445 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 504
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 505 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 564
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 565 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 624
Query: 671 atccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgac 730
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 625 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 684
Query: 731 gactgcatctccatc 745
|||||||||||||||
Sbjct: 685 gactgcatctccatc 699
>gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D09_A002 5', mRNA sequence
Length = 748
Score = 753 bits (380), Expect = 0.0
Identities = 569/629 (90%), Gaps = 11/629 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaat---ggc 187
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | |||
Sbjct: 126 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgaaagcggc 185
Query: 188 aagacggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccggg 247
|||| ||| ||||||||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 186 aagaaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccggg 245
Query: 248 aagcagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggc 307
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 246 aagcagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggc 305
Query: 308 ccatgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggaccta 367
|| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 306 ccgtgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctg 365
Query: 368 agccagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatc 427
||||||||||||| |||| ||||||||||| || || ||||||||||| || |||
Sbjct: 366 agccagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatc 419
Query: 428 accggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtc 487
||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||| |
Sbjct: 420 accggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgcc 479
Query: 488 aagaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggg 547
||||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||
Sbjct: 480 aagaagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaccaacggg 539
Query: 548 gaggtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgc 607
||||||||||||||||||||||| ||| |||||||||||||||||||| ||| | |||||
Sbjct: 540 gaggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgc 599
Query: 608 aaggacatgctg-atcaa-ggacgtcaatgtgacggcgcccggggacagccccaacacgg 665
||||||||| || || || ||| || | || ||||||||||||||||||||||||||||
Sbjct: 600 aaggacatgttgnattaagggatgtgacggtcacggcgcccggggacagccccaacacgg 659
Query: 666 acggcatccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcg 725
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 660 acggcatccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcg 719
Query: 726 gcgacgactgcatctccatcggccccggg 754
|||||||||||||||||||||||||||||
Sbjct: 720 gcgacgactgcatctccatcggccccggg 748
>gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_F04_A002 5', mRNA sequence
Length = 716
Score = 751 bits (379), Expect = 0.0
Identities = 540/594 (90%), Gaps = 6/594 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 129 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 188
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 189 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 248
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 249 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 308
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 309 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 368
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 369 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 422
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 423 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 482
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 483 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 542
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 543 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 602
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 603 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 662
Query: 671 atccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtc 724
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 663 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtc 716
>gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_37_F12_A002 5', mRNA sequence
Length = 719
Score = 749 bits (378), Expect = 0.0
Identities = 539/593 (90%), Gaps = 6/593 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 133 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 192
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 193 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 252
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 253 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 312
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 313 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 372
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 373 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 426
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 427 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 486
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 487 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 546
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 547 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 606
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 607 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 666
Query: 671 atccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgt 723
||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 667 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgt 719
>gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_D04_A002 5', mRNA sequence
Length = 711
Score = 737 bits (372), Expect = 0.0
Identities = 536/591 (90%), Gaps = 6/591 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 127 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 186
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 187 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 246
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 247 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 306
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 307 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 366
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 367 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 420
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| | ||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 421 ggcaaggggaggctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 480
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 481 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 540
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 541 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 600
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 601 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 660
Query: 671 atccacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggc 721
||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 661 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggc 711
>gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_D07_A002 5', mRNA sequence
Length = 709
Score = 726 bits (366), Expect = 0.0
Identities = 521/573 (90%), Gaps = 6/573 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 141 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 200
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||
Sbjct: 201 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccggggag 260
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 261 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 320
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 321 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 380
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 381 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 434
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 435 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 494
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 495 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 554
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 555 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 614
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 615 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 674
Query: 671 atccacatgggcgactcgtccggggtcaccatc 703
|||||||||||||||||||||||||||||||||
Sbjct: 675 atccacatgggcgactcgtccggggtcaccatc 707
>gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_F02_A002 5', mRNA sequence
Length = 693
Score = 718 bits (362), Expect = 0.0
Identities = 520/573 (90%), Gaps = 6/573 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 126 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 185
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 186 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 245
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 246 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 305
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 306 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 365
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 366 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 419
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 420 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 479
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 480 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacgacggggag 539
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 540 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 599
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || ||||||||||||||||||||| |||||||||||
Sbjct: 600 gacatgttgattaaggatgtgacggtcacggcgcccggggacagcccccacacggacggc 659
Query: 671 atccacatgggcgactcgtccggggtcaccatc 703
|||||||||||||||||||||||||||||||||
Sbjct: 660 atccacatgggcgactcgtccggggtcaccatc 692
>gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_47_C02_A002 5', mRNA sequence
Length = 682
Score = 700 bits (353), Expect = 0.0
Identities = 508/560 (90%), Gaps = 6/560 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 129 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 188
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 189 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 248
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 249 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 308
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 309 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 368
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
|||||||||| |||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 369 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 422
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 423 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 482
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 483 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 542
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||| | ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 543 gtgtccgggatcacgctggtaaacgccaagttcttccacatgaacgtgttccagtgcaag 602
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggc 670
|||||| |||| ||||| || | || |||||||||||||||||||||||||||||||||
Sbjct: 603 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 662
Query: 671 atccacatgggcgactcgtc 690
||||||||||||||||||||
Sbjct: 663 atccacatgggcgactcgtc 682
>gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_51_A10_A002 5', mRNA sequence
Length = 651
Score = 680 bits (343), Expect = 0.0
Identities = 516/573 (90%), Gaps = 7/573 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 85 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 144
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 145 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 204
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcgg-accactcaacttcacaggccc 309
||||||||||||||||| |||||||||| ||||||| | | ||||||||||| |||||
Sbjct: 205 cagacgatcctcatccctaagggcgactacctcgtctgtatttctcaacttcaccggccc 264
Query: 310 atgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaag 369
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||
Sbjct: 265 gtgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgag 324
Query: 370 ccagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcac 429
||||||||||| |||| ||||||||||| || || ||||||||||| || |||||
Sbjct: 325 ccagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcac 378
Query: 430 cggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaa 489
||||||||| ||||||||||||||||| || |||||||||||||||||||| |||| |||
Sbjct: 379 cggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaa 438
Query: 490 gaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacgggga 549
||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||
Sbjct: 439 gaagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacgggga 498
Query: 550 ggtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaa 609
||||||||||||||||||||| ||| |||||||||||||||||||| ||| | | |||||
Sbjct: 499 ggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccantgcaa 558
Query: 610 ggacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacgg 669
||||||| |||| ||||| || | || ||||||||||||||||||||||||||||||||
Sbjct: 559 ggacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacgg 618
Query: 670 catccacatgggcgactcgtccggggtcaccat 702
|||||||||||||||||||||||||||||||||
Sbjct: 619 catccacatgggcgactcgtccggggtcaccat 651
>gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 3', mRNA sequence
Length = 637
Score = 676 bits (341), Expect = 0.0
Identities = 507/561 (90%), Gaps = 1/561 (0%)
Strand = Plus / Plus
Query: 724 cggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgac 783
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 1 cggcgacgactgcatctccatcggccccgggacaaccaaggtgaacatcaccggcgtcac 60
Query: 784 ctgcggccccggccacggcatcagcatcggcagcctagggcggtacaaggacgagaagga 843
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 atgcggccccggccatggcatcagcatcggcagcctggggcggtacaaggacgagaagga 120
Query: 844 cgtcacggatatcaacgtcaaggactgcacgcttaagaagacggccaacggcgtccgcat 903
||||||||| |||||||| |||||||| ||||| ||||||||| ||||||| |||| ||
Sbjct: 121 cgtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaacggcctccggat 180
Query: 904 caaggcgtatgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaatat 963
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 caaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaacat 240
Query: 964 caagatggaggactcgggctaccccatcatcatcgacatgaagtactgccccaacaagtt 1023
|||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 241 caagatggaggactcgtcgaaccccattatcatcgacatgaagtactgccctaacaaaat 300
Query: 1024 atgcaccgccaatggtgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcac 1083
|||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 301 ctgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacgtcac 360
Query: 1084 cggcacctcctccaccccggaggccgtcaacctgctctgctctgccaagatcccatgcac 1143
|||||||||| ||| ||| |||||||||| |||||||||||| | ||||||||| |||||
Sbjct: 361 cggcacctccgccagccccgaggccgtcagcctgctctgctccgacaagatcccctgcac 420
Query: 1144 cggcgtcaccatggacgacgtcaacatcaagtacagtggcaccaacaacaagaccatggc 1203
|||||||||||||| ||||||| || |||||||||||| |||||||||||||||||
Sbjct: 421 tggcgtcaccatggataacgtcaaggtcgagtacagtggcaaaaacaacaagaccatggc 480
Query: 1204 cgtatgcaagaacgctaagggcagcgccaagggttgcctcaaggagctcgcatgcttcta 1263
||||||| | ||||| ||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 481 cgtatgccaaaacgccaagggcagcgccacaggctgcctcaaggagctcgcatgcttcta 540
Query: 1264 gaaccaccatcgacccatctc 1284
| ||| ||||| |||||||||
Sbjct: 541 g-acctccatccacccatctc 560
>gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 526
Score = 666 bits (336), Expect = 0.0
Identities = 475/520 (91%), Gaps = 1/520 (0%)
Strand = Plus / Minus
Query: 501 gcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggaggtgtccggga 560
|||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 526 gcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggaggtgtccggga 467
Query: 561 tcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaaggacatgctga 620
|||||||||| ||| |||||||||||||||||||| ||| | |||||||||||||| |||
Sbjct: 466 tcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaaggacatgttga 407
Query: 621 tcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggcatccacatgg 680
| ||||| || | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ttaaggatgtgacggtcacggcgcccggggacagccccaacacggacggcatccacatgg 347
Query: 681 gcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgacgactgcatct 740
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 346 gcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgacgactgcatct 287
Query: 741 ccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccccggccacg 800
|||||||||||||||| |||||||||||||||||||||| || |||||||||||||| |
Sbjct: 286 ccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggccatg 227
Query: 801 gcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggatatcaacg 860
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 226 gcatcagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaacg 167
Query: 861 tcaaggactgcacgcttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacg 920
| |||||||| ||||| ||||||||| ||||||| |||| ||||||||||| |||||||
Sbjct: 166 tgaaggactgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacgaggacg 107
Query: 921 ccgcctccgtgctcaccgcctccaagatccactatgagaatatcaagatggaggactcgg 980
|||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| |
Sbjct: 106 ccgcctccgtgctcaccgcctccaagatccacta-gagaacatcaagagggaggactggt 48
Query: 981 gctaccccatcatcatcgacatgaagtactgccccaacaa 1020
||||||| ||||| |||| |||||||||||| |||||
Sbjct: 47 cgaaccccattatcatggacaggaagtactgccctaacaa 8
>gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 706
Score = 644 bits (325), Expect = 0.0
Identities = 480/532 (90%), Gaps = 6/532 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 181 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 240
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 241 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 300
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 301 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 360
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 361 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 420
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
||||||||| ||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 421 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 474
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 475 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 534
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 535 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 594
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 595 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 654
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaaca 662
|||||| |||| || || || | || |||||||||||||||||||||||||
Sbjct: 655 gacatgttgattaaagatgtgacggtcacggcgcccggggacagccccaaca 706
>gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 3', mRNA sequence
Length = 637
Score = 642 bits (324), Expect = 0.0
Identities = 493/548 (89%), Gaps = 1/548 (0%)
Strand = Plus / Plus
Query: 737 atctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccccggc 796
|||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||
Sbjct: 1 atctccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggc 60
Query: 797 cacggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggatatc 856
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 61 catggcatcagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggacatc 120
Query: 857 aacgtcaaggactgcacgcttaagaagacggccaacggcgtccgcatcaaggcgtatgag 916
||||| |||||||| ||||| ||||||||| ||||||| |||| ||||||||||| |||
Sbjct: 121 aacgtgaaggactgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacgag 180
Query: 917 gacgccgcctccgtgctcaccgcctccaagatccactatgagaatatcaagatggaggac 976
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gacgccgcctccgtgctcaccgcctccaagatccactatgagaacatcaagatggaggac 240
Query: 977 tcgggctaccccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaat 1036
||| ||||||| ||||||||||||||||||||||| ||||| | ||||||||||
Sbjct: 241 tcgtcgaaccccattatcatcgacatgaagtactgccctaacaaaatctgcaccgccagc 300
Query: 1037 ggtgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcctcc 1096
|| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct: 301 ggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacgtcaccggcacctccgcc 360
Query: 1097 accccggaggccgtcaacctgctctgctctgccaagatcccatgcaccggcgtcaccatg 1156
| ||| |||||||||| |||||||||||| | ||||||||| ||||| ||||||||||||
Sbjct: 361 agccccgaggccgtcagcctgctctgctccgacaagatcccctgcactggcgtcaccatg 420
Query: 1157 gacgacgtcaacatcaagtacagtggcaccaacaacaagaccatggccgtatgcaagaac 1216
|| ||||||| || | |||||||||| |||||||||||||||||||||||| | |||
Sbjct: 421 gataacgtcaaggtcgaatacagtggcaaaaacaacaagaccatggccgtatgccaaaac 480
Query: 1217 gctaagggcagcgccaagggttgcctcaaggagctcgcatgcttctagaaccaccatcga 1276
|| ||||||||||||| || ||||||||||||||||||||||||||| ||| ||||| |
Sbjct: 481 gccaagggcagcgccacaggctgcctcaaggagctcgcatgcttctag-acctccatcca 539
Query: 1277 cccatctc 1284
||||||||
Sbjct: 540 cccatctc 547
>gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f211n16, DNA
sequence
Length = 695
Score = 640 bits (323), Expect = 0.0
Identities = 478/530 (90%), Gaps = 6/530 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 172 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 231
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 232 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 291
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 292 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 351
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 352 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 411
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
||||||||| ||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 412 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 465
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 466 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 525
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 526 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 585
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||| | ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 586 gtgtccgggatcacgctggtaaacgccaagttcttccacatgaacgtgttccagtgcaag 645
Query: 611 gacatgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaa 660
|||||| |||| ||||| || | || |||||||||||||||||||||||
Sbjct: 646 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaa 695
>gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_F02_A002 3', mRNA sequence
Length = 619
Score = 626 bits (316), Expect = e-177
Identities = 488/544 (89%), Gaps = 1/544 (0%)
Strand = Plus / Plus
Query: 741 ccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccccggccacg 800
|||||||||||||||| |||||||||||||||||||||| || |||||||||||||| |
Sbjct: 1 ccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggccatg 60
Query: 801 gcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggatatcaacg 860
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 gcatcagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaacg 120
Query: 861 tcaaggactgcacgcttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacg 920
| |||||||| ||||| ||||||||| ||||||| |||| ||||||||||| |||||||
Sbjct: 121 tgaaggactgtacgctaaagaagacgagcaacggcctccggatcaaggcgtacgaggacg 180
Query: 921 ccgcctccgtgctcaccgcctccaagatccactatgagaatatcaagatggaggactcgg 980
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 ccgcctccgtgctcaccgcctccaagatccactatgagaacatcaagatggaggactcgt 240
Query: 981 gctaccccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtg 1040
||||||| ||||||||||||||||||||||| ||||| | |||||||||| || |
Sbjct: 241 cgaaccccattatcatcgacatgaagtactgccctaacaaaatctgcaccgccagcggcg 300
Query: 1041 cctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcctccaccc 1100
|||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||
Sbjct: 301 cctccaaggtcaccgtcaaggacgtctccttcaagaacgtcaccggcacctccgccagcc 360
Query: 1101 cggaggccgtcaacctgctctgctctgccaagatcccatgcaccggcgtcaccatggacg 1160
| |||||||||| |||||||||||| | ||||||||| ||||| ||||||||||||||
Sbjct: 361 ccgaggccgtcagcctgctctgctccgacaagatcccctgcactggcgtcaccatggata 420
Query: 1161 acgtcaacatcaagtacagtggcaccaacaacaagaccatggccgtatgcaagaacgcta 1220
||||||| || | |||||||||| |||||||||||||||||||||||| | ||||| |
Sbjct: 421 acgtcaaggtcgaatacagtggcaaaaacaacaagaccatggccgtatgccaaaacgcca 480
Query: 1221 agggcagcgccaagggttgcctcaaggagctcgcatgcttctagaaccaccatcgaccca 1280
|||||||||||| || ||||||||||||||||||||||| ||| ||| ||||| |||||
Sbjct: 481 agggcagcgccacaggctgcctcaaggagctcgcatgcttttag-acctccatccaccca 539
Query: 1281 tctc 1284
||||
Sbjct: 540 tctc 543
>gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 459
Score = 624 bits (315), Expect = e-177
Identities = 414/447 (92%)
Strand = Plus / Plus
Query: 647 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcacc 706
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcgag 66
Query: 707 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 766
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 67 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtg 126
Query: 767 aacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcgg 826
|||||||||||||| || |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 127 aacatcaccggcgtcacatgcggccccggccatggcatcagcatcggcagcctggggcgg 186
Query: 827 tacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgcttaagaagacg 886
|||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||
Sbjct: 187 tacaaggacgagaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacg 246
Query: 887 gccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctcaccgcctccaag 946
||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 247 agcaacggcctccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaag 306
Query: 947 atccactatgagaatatcaagatggaggactcgggctaccccatcatcatcgacatgaag 1006
|||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 307 atccactatgagaacatcaagatggaggactcgtcgaaccccattatcatcgacatgaag 366
Query: 1007 tactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccgtcaaggacgtc 1066
|||||||| ||||| | |||||||||| || |||||||||||||||||||||||||||
Sbjct: 367 tactgccctaacaaaatctgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtc 426
Query: 1067 accttcaagaacatcaccggcacctcc 1093
||||||||||| ||||||||||||||
Sbjct: 427 tccttcaagaacgtcaccggcacctcc 453
>gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_23_F06_A002 5', mRNA sequence
Length = 616
Score = 611 bits (308), Expect = e-173
Identities = 445/491 (90%), Gaps = 6/491 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 132 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 191
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 192 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 251
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 252 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 311
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 312 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 371
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
||||||||| ||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 372 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 425
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| ||||
Sbjct: 426 ggcaaggggaagctcgacgggcagggccccgccgtgtggggcaagaactcgtgcgccaag 485
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 486 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 545
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaag 610
|||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||
Sbjct: 546 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 605
Query: 611 gacatgctgat 621
|||||| ||||
Sbjct: 606 gacatgttgat 616
>gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 5', mRNA sequence
Length = 645
Score = 607 bits (306), Expect = e-171
Identities = 468/521 (89%), Gaps = 7/521 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 131 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 190
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 191 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 250
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 251 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 310
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 311 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 370
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
||||||||| ||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 371 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 424
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| ||| ||||
Sbjct: 425 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcaccaag 484
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 485 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 544
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacat-gaacatgtacaagtgcaa 609
|||||||||||||||||||| ||| |||||||||||||||| |||| ||| | |||||||
Sbjct: 545 gtgtccgggatcacgctgctaaacgccaagttcttccacatggaacgtgttccagtgcaa 604
Query: 610 ggacatgctgatcaaggacgtcaatgtgacggcgcccgggg 650
||||||| |||| ||||| || | || |||||||||||||
Sbjct: 605 ggacatgttgattaaggatgtgacggtcacggcgcccgggg 645
>gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 3', mRNA sequence
Length = 618
Score = 603 bits (304), Expect = e-170
Identities = 479/536 (89%), Gaps = 1/536 (0%)
Strand = Plus / Plus
Query: 749 cccgggacctccaaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagc 808
|||||||| |||||||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 1 cccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggccatggcatcagc 60
Query: 809 atcggcagcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggac 868
||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 61 atcggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaacgtgaaggac 120
Query: 869 tgcacgcttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctcc 928
|| ||||| ||||||||| ||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 121 tgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacgaggacgccgcctcc 180
Query: 929 gtgctcaccgcctccaagatccactatgagaatatcaagatggaggactcgggctacccc 988
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 181 gtgctcaccgcctccaagatccactatgagaacatcaagatggaggactcgtcgaacccc 240
Query: 989 atcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctccaag 1048
|| ||||||||||||||||||||||| ||||| | |||||||||| || |||||||||
Sbjct: 241 attatcatcgacatgaagtactgccctaacaaaatctgcaccgccagcggcgcctccaag 300
Query: 1049 gtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggcc 1108
|||||||||||||||||| ||||||||||| |||||||||||||| ||| ||| ||||||
Sbjct: 301 gtcaccgtcaaggacgtctccttcaagaacgtcaccggcacctccgccagccccgaggcc 360
Query: 1109 gtcaacctgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaac 1168
|||| |||||| ||||| | ||||||||| ||||| |||||||||||||| |||||||
Sbjct: 361 gtcagcctgctttgctccgacaagatcccctgcactggcgtcaccatggataacgtcaag 420
Query: 1169 atcaagtacagtggcaccaacaacaagaccatggccgtatgcaagaacgctaagggcagc 1228
|| | |||||||||| |||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 421 gtcgaatacagtggcaaaaacaacaagaccatggccgtatgccaaaacgccaagggcagc 480
Query: 1229 gccaagggttgcctcaaggagctcgcatgcttctagaaccaccatcgacccatctc 1284
|||| || ||||||||||||||||||||||| ||| ||| ||||| |||||||||
Sbjct: 481 gccacaggctgcctcaaggagctcgcatgcttttag-acctccatccacccatctc 535
>gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 670
Score = 589 bits (297), Expect = e-166
Identities = 460/513 (89%), Gaps = 1/513 (0%)
Strand = Plus / Plus
Query: 772 caccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcggtacaa 831
||||||||| || |||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1 caccggcgtcacatgcggccccggccatggcatcagcatcggcagcctggggcggtacaa 60
Query: 832 ggacgagaaggacgtcacggatatcaacgtcaaggactgcacgcttaagaagacggccaa 891
||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||| |||
Sbjct: 61 ggacgagaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaa 120
Query: 892 cggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctcaccgcctccaagatcca 951
|||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggcctccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatcca 180
Query: 952 ctatgagaatatcaagatggaggactcgggctaccccatcatcatcgacatgaagtactg 1011
||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 181 ctatgagaacatcaagatggaggactcgtcgaaccccattatcatcgacatgaagtactg 240
Query: 1012 ccccaacaagttatgcaccgccaatggtgcctccaaggtcaccgtcaaggacgtcacctt 1071
||| ||||| | |||||||||| || ||||||||||||||||||||||||||| ||||
Sbjct: 241 ccctaacaaaatctgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtctcctt 300
Query: 1072 caagaacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctgccaa 1131
||||||| |||||||||||||| ||| ||| |||||||||| |||||||||||| | |||
Sbjct: 301 caagaacgtcaccggcacctccgccagccccgaggccgtcagcctgctctgctccgacaa 360
Query: 1132 gatcccatgcaccggcgtcaccatggacgacgtcaacatcaagtacagtggcaccaacaa 1191
|||||| ||||| |||||||||||||| ||||||| || | |||||||||| |||||
Sbjct: 361 gatcccctgcactggcgtcaccatggataacgtcaaggtcgaatacagtggcaaaaacaa 420
Query: 1192 caagaccatggccgtatgcaagaacgctaagggcagcgccaagggttgcctcaaggagct 1251
||||||||||||||||||| | ||||| ||||||||||||| || ||||||||||||||
Sbjct: 421 caagaccatggccgtatgccaaaacgccaagggcagcgccacaggctgcctcaaggagct 480
Query: 1252 cgcatgcttctagaaccaccatcgacccatctc 1284
||||||||||||| ||| ||||| |||||||||
Sbjct: 481 cgcatgcttctag-acctccatccacccatctc 512
>gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_25_H01_A002 5', mRNA sequence
Length = 586
Score = 585 bits (295), Expect = e-165
Identities = 417/458 (91%), Gaps = 6/458 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 135 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 194
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 195 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 254
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 255 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 314
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 315 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 374
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
||||||||| ||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 375 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 428
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 429 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 488
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 489 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 548
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttcca 588
|||||||||||||||||||| ||| |||||||||||||
Sbjct: 549 gtgtccgggatcacgctgctaaacgccaagttcttcca 586
>gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_A04_A002 5', mRNA sequence
Length = 592
Score = 583 bits (294), Expect = e-164
Identities = 422/465 (90%), Gaps = 6/465 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 128 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 187
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 188 aaggacagcgcgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 247
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 248 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 307
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 308 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 367
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
||||||||| ||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 368 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 421
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 422 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 481
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 550
|||||||||||||||||||| ||||||||||||||| |||||| ||||| ||||||||||
Sbjct: 482 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaccaacggggag 541
Query: 551 gtgtccgggatcacgctgctcaactccaagttcttccacatgaac 595
|||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 542 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaac 586
>gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 3', mRNA sequence
Length = 609
Score = 579 bits (292), Expect = e-163
Identities = 449/500 (89%), Gaps = 1/500 (0%)
Strand = Plus / Plus
Query: 785 tgcggccccggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggac 844
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9 tgcggccccggccatggcatcagcatcggcagcctggggcggtacaaggacgagaaggac 68
Query: 845 gtcacggatatcaacgtcaaggactgcacgcttaagaagacggccaacggcgtccgcatc 904
|||||||| |||||||| |||||||| ||||| ||||||||| ||||||| |||| |||
Sbjct: 69 gtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaacggcctccggatc 128
Query: 905 aaggcgtatgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaatatc 964
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 129 aaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaacatc 188
Query: 965 aagatggaggactcgggctaccccatcatcatcgacatgaagtactgccccaacaagtta 1024
||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 189 aagatggaggactcgtcgaaccccattatcatcgacatgaagtactgccctaacaaaatc 248
Query: 1025 tgcaccgccaatggtgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcacc 1084
|||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 249 tgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacgtcacc 308
Query: 1085 ggcacctcctccaccccggaggccgtcaacctgctctgctctgccaagatcccatgcacc 1144
||||||||| ||| ||| |||||||||| |||||||||||| | ||||||||| |||||
Sbjct: 309 ggcacctccgccagccccgaggccgtcagcctgctctgctccgacaagatcccctgcact 368
Query: 1145 ggcgtcaccatggacgacgtcaacatcaagtacagtggcaccaacaacaagaccatggcc 1204
|||||||||||||| ||||||| || | |||||||||| ||||||||||||||||||
Sbjct: 369 ggcgtcaccatggataacgtcaaggtcgaatacagtggcaaaaacaacaagaccatggcc 428
Query: 1205 gtatgcaagaacgctaagggcagcgccaagggttgcctcaaggagctcgcatgcttctag 1264
|||||| | ||||| ||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 429 gtatgccaaaacgccaagggcagcgccacaggctgcctcaaggagctcgcatgcttctag 488
Query: 1265 aaccaccatcgacccatctc 1284
||| ||||| |||||||||
Sbjct: 489 -acctccatccacccatctc 507
>gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 5', mRNA sequence
Length = 663
Score = 579 bits (292), Expect = e-163
Identities = 397/432 (91%)
Strand = Plus / Plus
Query: 589 catgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatgtgacggcgcccgg 648
||||||| ||| | |||||||||||||| |||| ||||| || | || |||||||||||
Sbjct: 221 catgaacgtgttccagtgcaaggacatgttgattaaggatgtgacggtcacggcgcccgg 280
Query: 649 ggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcaccaa 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 281 ggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcgagaa 340
Query: 709 caccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtgaa 768
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 341 caccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtgaa 400
Query: 769 catcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcggta 828
|||||||||||| || |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 401 catcaccggcgtcacatgcggccccggccatggcatcagcatcggcagcctggggcggta 460
Query: 829 caaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgcttaagaagacggc 888
|||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||
Sbjct: 461 caaggacgagaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacgag 520
Query: 889 caacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctcaccgcctccaagat 948
||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 521 caacggcctccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaagat 580
Query: 949 ccactatgagaatatcaagatggaggactcgggctaccccatcatcatcgacatgaagta 1008
|||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 581 ccactatgagaacatcaagatggaggactcgtcgaaccccattatcatcgacatgaagta 640
Query: 1009 ctgccccaacaa 1020
|||||| |||||
Sbjct: 641 ctgccctaacaa 652
Score = 105 bits (53), Expect = 1e-020
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 133 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 192
Query: 191 acggatagcacgaaggctgtgcaggaggc 219
| ||| |||||||||||||||||||||||
Sbjct: 193 aaggacagcacgaaggctgtgcaggaggc 221
>gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 3', mRNA sequence
Length = 670
Score = 579 bits (292), Expect = e-163
Identities = 449/500 (89%), Gaps = 1/500 (0%)
Strand = Plus / Plus
Query: 785 tgcggccccggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggac 844
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6 tgcggccccggccatggcatcagcatcggcagcctggggcggtacaaggacgagaaggac 65
Query: 845 gtcacggatatcaacgtcaaggactgcacgcttaagaagacggccaacggcgtccgcatc 904
|||||||| |||||||| |||||||| ||||| ||||||||| ||||||| |||| |||
Sbjct: 66 gtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaacggcctccggatc 125
Query: 905 aaggcgtatgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaatatc 964
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 126 aaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaacatc 185
Query: 965 aagatggaggactcgggctaccccatcatcatcgacatgaagtactgccccaacaagtta 1024
||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 186 aagatggaggactcgtcgaaccccattatcatcgacatgaagtactgccctaacaaaatc 245
Query: 1025 tgcaccgccaatggtgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcacc 1084
|||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 246 tgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacgtcacc 305
Query: 1085 ggcacctcctccaccccggaggccgtcaacctgctctgctctgccaagatcccatgcacc 1144
||||||||| ||| ||| |||||||||| |||||||||||| | ||||||||| |||||
Sbjct: 306 ggcacctccgccagccccgaggccgtcagcctgctctgctccgacaagatcccctgcact 365
Query: 1145 ggcgtcaccatggacgacgtcaacatcaagtacagtggcaccaacaacaagaccatggcc 1204
|||||||||||||| ||||||| || | |||||||||| ||||||||||||||||||
Sbjct: 366 ggcgtcaccatggataacgtcaaggtcgaatacagtggcaaaaacaacaagaccatggcc 425
Query: 1205 gtatgcaagaacgctaagggcagcgccaagggttgcctcaaggagctcgcatgcttctag 1264
|||||| | ||||| ||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 426 gtatgccaaaacgccaagggcagcgccacaggctgcctcaaggagctcgcatgcttctag 485
Query: 1265 aaccaccatcgacccatctc 1284
||| ||||| |||||||||
Sbjct: 486 -acctccatccacccatctc 504
>gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808294, DNA
sequence
Length = 787
Score = 547 bits (276), Expect = e-153
Identities = 430/480 (89%), Gaps = 1/480 (0%)
Strand = Plus / Minus
Query: 805 cagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggatatcaacgtcaa 864
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 787 cagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaacgtgaa 728
Query: 865 ggactgcacgcttaagaagacggccaacggcgtccgcatcaaggcgtatgaggacgccgc 924
|||||| ||||| ||||||||| ||||||| |||| ||||||||||| |||||||||||
Sbjct: 727 ggactgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacgaggacgccgc 668
Query: 925 ctccgtgctcaccgcctccaagatccactatgagaatatcaagatggaggactcgggcta 984
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 667 ctccgtgctcaccgcctccaagatccactatgagaacatcaagatggaggactcgtcgaa 608
Query: 985 ccccatcatcatcgacatgaagtactgccccaacaagttatgcaccgccaatggtgcctc 1044
|||||| ||||||||||||||||||||||| ||||| | |||||||||| || |||||
Sbjct: 607 ccccattatcatcgacatgaagtactgccctaacaaaatctgcaccgccagcggcgcctc 548
Query: 1045 caaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccgga 1104
|||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||| ||
Sbjct: 547 caaggtcaccgtcaaggacgtctccttcaagaacgtcaccggcacctccgccagccccga 488
Query: 1105 ggccgtcaacctgctctgctctgccaagatcccatgcaccggcgtcaccatggacgacgt 1164
|||||||| |||||||||||| | ||||||||| ||||| |||||||||||||| ||||
Sbjct: 487 ggccgtcagcctgctctgctccgacaagatcccctgcactggcgtcaccatggataacgt 428
Query: 1165 caacatcaagtacagtggcaccaacaacaagaccatggccgtatgcaagaacgctaaggg 1224
||| || | |||||||||| |||||||||||||||||||||||| | ||||| |||||
Sbjct: 427 caaggtcgaatacagtggcaaaaacaacaagaccatggccgtatgccaaaacgccaaggg 368
Query: 1225 cagcgccaagggttgcctcaaggagctcgcatgcttctagaaccaccatcgacccatctc 1284
|||||||| || ||||||||||||||||||||||||||| ||| ||||| |||||||||
Sbjct: 367 cagcgccacaggctgcctcaaggagctcgcatgcttctag-acctccatccacccatctc 309
>gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 699
Score = 515 bits (260), Expect = e-144
Identities = 519/604 (85%), Gaps = 1/604 (0%)
Strand = Plus / Plus
Query: 554 tccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaaggac 613
||||||||||| ||||| |||||||||||||||||||||||| ||| | ||||||| | |
Sbjct: 97 tccgggatcaccctgctgaactccaagttcttccacatgaacgtgttccagtgcaaaggc 156
Query: 614 atgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggcatc 673
|| |||||||||||| | || || ||||||||||||||||||||||| |||||||||
Sbjct: 157 gtgacgatcaaggacgtgaccgtcaccgcgcccggggacagccccaacaccgacggcatc 216
Query: 674 cacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgacgac 733
||||| || ||||| ||| ||||||||||||| |||| ||||||||| || ||||||
Sbjct: 217 cacattggtgactcctccaaggtcaccatcaccggcaccaccatcggcgtgggtgacgac 276
Query: 734 tgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggcccc 793
||||||||||||||||| || | | || | | ||| |||||||||| |||||||| |||
Sbjct: 277 tgcatctccatcggccctggcagcaccgggatcaacgtcaccggcgtcacctgcgggccc 336
Query: 794 ggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggat 853
||||||||||||||| |||||||||| || |||||||||| |||||||| || |||||
Sbjct: 337 ggccacggcatcagcgtcggcagcctgggcaggtacaaggatgagaaggatgtgacggac 396
Query: 854 atcaacgtcaaggactgcacgcttaagaagacggccaacggcgtccgcatcaaggcgtat 913
||||||||||||||||||||||| |||||||| ||| |||||||| |||||| | ||
Sbjct: 397 atcaacgtcaaggactgcacgctcaagaagaccagcaatggcgtccggatcaagtcctac 456
Query: 914 gaggacgccgcctccgtgctcaccgcctccaagatccactatgagaatatcaagatggag 973
||||||||||| | |||| |||| ||||||||| ||||||| ||||| || |||||
Sbjct: 457 gaggacgccgcgtgcgtgatcactgcctccaagctccactacgagaacatagccatggac 516
Query: 974 gactcgggctaccccatcatcatcgacatgaagtactgccccaacaagttatgcaccgcc 1033
||| || | |||||||||||||||||||||||||||||||||||||| | ||||| |||
Sbjct: 517 gacgtggccaaccccatcatcatcgacatgaagtactgccccaacaagatctgcactgcc 576
Query: 1034 aatggtgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcc 1093
|| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 577 aagggtgactccaaggtcaccgtcaaggacgtcacgttcaagaacatcaccggcacctca 636
Query: 1094 tccaccccggaggccgtcaacctgctctgctctgccaagatcccatgcaccggcgtcacc 1153
||||||||||||||||||| |||||||||||| | || ||||| |||| ||||||||||
Sbjct: 637 tccaccccggaggccgtcagcctgctctgctccg-aaaaatcccctgcagcggcgtcacc 695
Query: 1154 atgg 1157
||||
Sbjct: 696 atgg 699
>gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179g22, DNA
sequence
Length = 403
Score = 511 bits (258), Expect = e-143
Identities = 368/405 (90%), Gaps = 6/405 (1%)
Strand = Plus / Minus
Query: 352 ggcgaccacggacctaagccagtacaaggatcatggtaattggatcgagattctacgcgt 411
||||||||||||||| ||||||||||||| |||| ||||||||||| || || ||
Sbjct: 403 ggcgaccacggacctgagccagtacaagg------gtaactggatcgagatcctgcgtgt 350
Query: 412 ggacaaccttgtcatcaccggcaagggaaagctcgacgggcaggggccagccgtgtggag 471
||||||||| || |||||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 349 ggacaacctggtgatcaccggcaaggggaagctcgacgggcagggccccgccgtgtggag 290
Query: 472 caagaactcctgcgtcaagaagtacgactgcaagatccttcccaactcgctggtgatgga 531
||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 289 caagaactcgtgcgccaagaagtacgactgcaagatcctgcccaactcgctggtgctgga 230
Query: 532 cttcgtgaacaacggggaggtgtccgggatcacgctgctcaactccaagttcttccacat 591
| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 229 gtacgtgaacaacggggaggtgtccgggatcacgctgctaaacgccaagttcttccacat 170
Query: 592 gaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatgtgacggcgcccgggga 651
|||| ||| | |||||||||||||| |||| ||||| || | || ||||||||||||||
Sbjct: 169 gaacgtgttccagtgcaaggacatgttgattaaggatgtgacggtcacggcgcccgggga 110
Query: 652 cagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcaccaacac 711
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 109 cagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcgagaacac 50
Query: 712 cgtcatcggcgtcggcgacgactgcatctccatcggccccgggac 756
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 cgtcatcggcgtcggcgacgactgcatctccatcggccccgggac 5
>gb|CF484989.1|CF484989 POL1_28_F08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_28_F08_A002 5', mRNA sequence
Length = 539
Score = 505 bits (255), Expect = e-141
Identities = 374/414 (90%), Gaps = 6/414 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 132 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 191
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 192 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 251
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 252 cagacgatcctcatccctaagggcgactacctcgtcggaccgctcaacttcaccggcccg 311
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 312 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 371
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
||||||||| ||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 372 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 425
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 426 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 485
Query: 491 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaac 544
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 486 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaac 539
>gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402626, DNA
sequence
Length = 671
Score = 500 bits (252), Expect = e-139
Identities = 492/572 (86%)
Strand = Plus / Plus
Query: 554 tccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaaggac 613
||||||||||| ||||| |||||||||||||||||||||||| ||| | ||||||| | |
Sbjct: 100 tccgggatcaccctgctgaactccaagttcttccacatgaacgtgttccagtgcaaaggc 159
Query: 614 atgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggcatc 673
|| |||||||||||| | || || ||||||||||||||||||||||| |||||||||
Sbjct: 160 gtgacgatcaaggacgtgaccgtcaccgcgcccggggacagccccaacaccgacggcatc 219
Query: 674 cacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgacgac 733
||||| || ||||| ||| ||||||||||||| |||| ||||||||| || ||||||
Sbjct: 220 cacattggtgactcctccaaggtcaccatcaccggcaccaccatcggcgtgggtgacgac 279
Query: 734 tgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggcccc 793
||||||||||||||||| || | | || | | ||| |||||||||| |||||||| |||
Sbjct: 280 tgcatctccatcggccctggcagcaccgggatcaacgtcaccggcgtcacctgcgggccc 339
Query: 794 ggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggat 853
||||||||||||||| |||||||||| || |||||||||| |||||||| || |||||
Sbjct: 340 ggccacggcatcagcgtcggcagcctgggcaggtacaaggatgagaaggatgtgacggac 399
Query: 854 atcaacgtcaaggactgcacgcttaagaagacggccaacggcgtccgcatcaaggcgtat 913
||||||||||||||||||||||| |||||||| ||| |||||||| |||||| | ||
Sbjct: 400 atcaacgtcaaggactgcacgctcaagaagaccagcaatggcgtccggatcaagtcctac 459
Query: 914 gaggacgccgcctccgtgctcaccgcctccaagatccactatgagaatatcaagatggag 973
||||||||||| | |||| |||| ||||||||| ||||||| ||||| || |||||
Sbjct: 460 gaggacgccgcgtgcgtgatcactgcctccaagctccactacgagaacatagccatggac 519
Query: 974 gactcgggctaccccatcatcatcgacatgaagtactgccccaacaagttatgcaccgcc 1033
||| || | |||||||||||||||||||||||||||||||||||||| | ||||| |||
Sbjct: 520 gacgtggccaaccccatcatcatcgacatgaagtactgccccaacaagatctgcactgcc 579
Query: 1034 aatggtgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcc 1093
|| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 580 aagggtgactccaaggtcaccgtcaaggacgtcacgttcaagaacatcaccggcacctca 639
Query: 1094 tccaccccggaggccgtcaacctgctctgctc 1125
||||||||||| ||||||| ||||||||||||
Sbjct: 640 tccaccccggaagccgtcagcctgctctgctc 671
>gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_G01_A002 3', mRNA sequence
Length = 709
Score = 492 bits (248), Expect = e-137
Identities = 402/452 (88%), Gaps = 1/452 (0%)
Strand = Plus / Plus
Query: 833 gacgagaaggacgtcacggatatcaacgtcaaggactgcacgcttaagaagacggccaac 892
|||||||||||||||||||| |||||||| |||||||| ||||| ||||||||| ||||
Sbjct: 56 gacgagaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaac 115
Query: 893 ggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctcaccgcctccaagatccac 952
||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ggcctccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatccac 175
Query: 953 tatgagaatatcaagatggaggactcgggctaccccatcatcatcgacatgaagtactgc 1012
|||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 176 tatgagaacatcaagatggaggactcgtcgaaccccattatcatcgacatgaagtactgc 235
Query: 1013 cccaacaagttatgcaccgccaatggtgcctccaaggtcaccgtcaaggacgtcaccttc 1072
|| ||||| | |||||||||| || ||||||||||||||||||||||||||| |||||
Sbjct: 236 cctaacaaaatctgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtctccttc 295
Query: 1073 aagaacatcaccggcacctcctccaccccggaggccgtcaacctgctctgctctgccaag 1132
||| || |||||||||||||| ||| ||| |||||||||| |||||||||||| | ||||
Sbjct: 296 aaggacgtcaccggcacctccgccagccccgaggccgtcagcctgctctgctccgacaag 355
Query: 1133 atcccatgcaccggcgtcaccatggacgacgtcaacatcaagtacagtggcaccaacaac 1192
||||| ||||| |||||||||||||| ||||||| || | |||||||||| ||||||
Sbjct: 356 atcccctgcactggcgtcaccatggataacgtcaaggtcgaatacagtggcaaaaacaac 415
Query: 1193 aagaccatggccgtatgcaagaacgctaagggcagcgccaagggttgcctcaaggagctc 1252
|||||||||||||||||| | ||||| ||||||||||||| || |||||||||||||||
Sbjct: 416 aagaccatggccgtatgccaaaacgccaagggcagcgccacaggctgcctcaaggagctc 475
Query: 1253 gcatgcttctagaaccaccatcgacccatctc 1284
|||||||||||| ||| ||||| |||||||||
Sbjct: 476 gcatgcttctag-acctccatccacccatctc 506
Score = 95.6 bits (48), Expect = 1e-017
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 198 gcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaagcagacga 257
|||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||
Sbjct: 1 gcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaagcagacga 60
>gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 580
Score = 486 bits (245), Expect = e-135
Identities = 476/553 (86%)
Strand = Plus / Plus
Query: 641 gcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcacc 700
||||||||||||||||||||||| |||||||||||||| || ||||| ||| |||||||
Sbjct: 28 gcgcccggggacagccccaacaccgacggcatccacattggtgactcctccaaggtcacc 87
Query: 701 atcaccaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacctcc 760
|||||| |||| ||||||||| || ||||||||||||||||||||||| || | | ||
Sbjct: 88 atcaccggcaccaccatcggcgtgggtgacgactgcatctccatcggccctggcagcacc 147
Query: 761 aaggtgaacatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagccta 820
| | ||| |||||||||| |||||||| |||||||||||||||||| ||||||||||
Sbjct: 148 gggatcaacgtcaccggcgtcacctgcgggcccggccacggcatcagcgtcggcagcctg 207
Query: 821 gggcggtacaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgcttaag 880
|| |||||||||| |||||||| || ||||| ||||||||||||||||||||||| |||
Sbjct: 208 ggcaggtacaaggatgagaaggatgtgacggacatcaacgtcaaggactgcacgctcaag 267
Query: 881 aagacggccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctcaccgcc 940
||||| ||| |||||||| |||||| | || ||||||||||| | |||| |||| |||
Sbjct: 268 aagaccagcaatggcgtccggatcaagtcctacgaggacgccgcgtgcgtgatcactgcc 327
Query: 941 tccaagatccactatgagaatatcaagatggaggactcgggctaccccatcatcatcgac 1000
|||||| ||||||| ||||| || ||||| ||| || | |||||||||||||||||
Sbjct: 328 tccaagctccactacgagaacatagccatggacgacgtggccaaccccatcatcatcgac 387
Query: 1001 atgaagtactgccccaacaagttatgcaccgccaatggtgcctccaaggtcaccgtcaag 1060
||||||||||||||||||||| | ||||| ||||| |||| |||||||||||||||||||
Sbjct: 388 atgaagtactgccccaacaagatctgcactgccaagggtgactccaaggtcaccgtcaag 447
Query: 1061 gacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgtcaacctgctc 1120
|||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 448 gacgtcacgttcaagaacatcaccggcacctcatccaccccggaggccgtcagcctgctc 507
Query: 1121 tgctctgccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagtacagt 1180
||||| | ||| ||||| |||| ||||||||||||||| || |||| || ||||||
Sbjct: 508 tgctccgacaaaatcccctgcagcggcgtcaccatggataacatcaaggtcgagtacaag 567
Query: 1181 ggcaccaacaaca 1193
|||||||||||||
Sbjct: 568 ggcaccaacaaca 580
>gb|CF486235.1|CF486235 POL1_36_C04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_C04_A002 5', mRNA sequence
Length = 515
Score = 476 bits (240), Expect = e-132
Identities = 353/391 (90%), Gaps = 6/391 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || || || |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 131 gcgtccgggcctggcggatcgttcgacatcagcaagttgggcgcctccggcgacggcaag 190
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 191 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 250
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 251 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 310
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 311 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 370
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
||||||||| ||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 371 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 424
Query: 431 ggcaagggaaagctcgacgggcaggggccagccgtgtggagcaagaactcctgcgtcaag 490
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 425 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 484
Query: 491 aagtacgactgcaagatccttcccaactcgc 521
|||||||||||||||||||| ||||||||||
Sbjct: 485 aagtacgactgcaagatcctgcccaactcgc 515
>gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id51c01 5', DNA sequence
Length = 574
Score = 472 bits (238), Expect = e-131
Identities = 472/550 (85%)
Strand = Plus / Plus
Query: 554 tccgggatcacgctgctcaactccaagttcttccacatgaacatgtacaagtgcaaggac 613
||||||||||| ||||| |||||||||||||||||||||||| ||| | ||||||| | |
Sbjct: 25 tccgggatcaccctgctgaactccaagttcttccacatgaacgtgttccagtgcaaaggc 84
Query: 614 atgctgatcaaggacgtcaatgtgacggcgcccggggacagccccaacacggacggcatc 673
|| |||||||||||| | || || ||||||||||||||||||||||| |||||||||
Sbjct: 85 gtgacgatcaaggacgtgaccgtcaccgcgcccggggacagccccaacaccgacggcatc 144
Query: 674 cacatgggcgactcgtccggggtcaccatcaccaacaccgtcatcggcgtcggcgacgac 733
||||| || ||||| ||| ||||||||||||| |||| ||||||||| || ||||||
Sbjct: 145 cacattggtgactcctccaaggtcaccatcaccggcaccaccatcggcgtgggtgacgac 204
Query: 734 tgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggcccc 793
||||||||||||||||| || | | || | | ||| |||||||||| |||||||| |||
Sbjct: 205 tgcatctccatcggccctggcagcaccgggatcaacgtcaccggcgtcacctgcgggccc 264
Query: 794 ggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggat 853
||||||||||||||| |||||||||| || |||||||||| |||||||| || |||||
Sbjct: 265 ggccacggcatcagcgtcggcagcctgggcaggtacaaggatgagaaggatgtgacggac 324
Query: 854 atcaacgtcaaggactgcacgcttaagaagacggccaacggcgtccgcatcaaggcgtat 913
||||||||||||||||||||||| |||||||| ||| |||||||| |||||| | ||
Sbjct: 325 atcaacgtcaaggactgcacgctcaagaagaccagcaatggcgtccggatcaagtcctac 384
Query: 914 gaggacgccgcctccgtgctcaccgcctccaagatccactatgagaatatcaagatggag 973
||||||||||| | |||| |||| ||||||||| ||||||| ||||| || |||||
Sbjct: 385 gaggacgccgcgtgcgtgatcactgcctccaagctccactacgagaacatagccatggac 444
Query: 974 gactcgggctaccccatcatcatcgacatgaagtactgccccaacaagttatgcaccgcc 1033
||| || | |||||||||||||||||||||||||||||||||||||| | ||||| |||
Sbjct: 445 gacgtggccaaccccatcatcatcgacatgaagtactgccccaacaagatctgcactgcc 504
Query: 1034 aatggtgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcc 1093
|| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 505 aagggtgactccaaggtcaccgtcaaggacgtcacgttcaagaacatcaccggcacctca 564
Query: 1094 tccaccccgg 1103
||||||||||
Sbjct: 565 tccaccccgg 574
>gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_62_A05_A002 3', mRNA sequence
Length = 678
Score = 466 bits (235), Expect = e-129
Identities = 333/363 (91%), Gaps = 2/363 (0%)
Strand = Plus / Plus
Query: 590 atgaacatgtacaagtgcaaggacatgctgatcaaggacgtcaatgtgacggcgcccggg 649
|||||| ||| | |||||||||||||| |||| ||||| || | || ||||||||||||
Sbjct: 1 atgaacgtgttccagtgcaaggacatgttgattaaggatgtgacggtcacggcgcccggg 60
Query: 650 gacagccccaac-acggacggcatccacatgggcgactcgtccggggtcaccatcaccaa 708
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 gacagccccaacnacggacggcatccacatgggcgactcgtccggggtcaccatcgagaa 120
Query: 709 caccgtcatc-ggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtga 767
|||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 caccgtcatcnggcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtga 180
Query: 768 acatcaccggcgtgacctgcggccccggccacggcatcagcatcggcagcctagggcggt 827
||||||||||||| || |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 181 acatcaccggcgtcacatgcggccccggccatggcatcagcatcggcagcctggggcggt 240
Query: 828 acaaggacgagaaggacgtcacggatatcaacgtcaaggactgcacgcttaagaagacgg 887
||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||
Sbjct: 241 acaaggacgagaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacga 300
Query: 888 ccaacggcgtccgcatcaaggcgtatgaggacgccgcctccgtgctcaccgcctccaaga 947
||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaacggcctccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaaga 360
Query: 948 tcc 950
|||
Sbjct: 361 tcc 363
Score = 147 bits (74), Expect = 4e-033
Identities = 122/138 (88%)
Strand = Plus / Plus
Query: 1128 ccaagatcccatgcaccggcgtcaccatggacgacgtcaacatcaagtacagtggcacca 1187
|||||||||| ||||| |||||||||||||| ||||||| || | |||||||||| |
Sbjct: 355 ccaagatcccctgcactggcgtcaccatggataacgtcaaggtcgaatacagtggcaaaa 414
Query: 1188 acaacaagaccatggccgtatgcaagaacgctaagggcagcgccaagggttgcctcaagg 1247
||||||||||||||||||||||| | ||||| ||||||||||||| || ||||||||||
Sbjct: 415 acaacaagaccatggccgtatgccaaaacgccaagggcagcgccacaggctgcctcaagg 474
Query: 1248 agctcgcatgcttctaga 1265
||||||||||||||||||
Sbjct: 475 agctcgcatgcttctaga 492
>gb|CF481701.1|CF481701 POL1_73_B09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_73_B09_A002 5', mRNA sequence
Length = 501
Score = 456 bits (230), Expect = e-126
Identities = 344/381 (90%), Gaps = 7/381 (1%)
Strand = Plus / Plus
Query: 131 gcgtccgggcccggtgggtccttcgacatcaccaagttgggcgcctctggcaatggcaag 190
||||||||||| || ||||| |||||||||| ||||||||||||||| ||| | ||||||
Sbjct: 126 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 185
Query: 191 acggatagcacgaaggctgtgcaggaggcgtgggcatcggcgtgcggcggcaccgggaag 250
| ||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 186 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 245
Query: 251 cagacgatcctcatccccaagggcgacttcctcgtcggaccactcaacttcacaggccca 310
||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct: 246 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 305
Query: 311 tgcaagggcgacgtgaccatccaggtgaatggcaatctgctggcgaccacggacctaagc 370
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 306 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 365
Query: 371 cagtacaaggatcatggtaattggatcgagattctacgcgtggacaaccttgtcatcacc 430
||||||||| ||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 366 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 419
Query: 431 ggcaagggaaagctcgacgggcaggg-gccagccgtgtggagcaagaactcctgcgtcaa 489
|||||||| ||||||||||||||||| || |||||||||||||||||||| |||| |||
Sbjct: 420 ggcaaggggaagctcgacgggcagggcccccgccgtgtggagcaagaactcgtgcgccaa 479
Query: 490 gaagtacgactgcaagatcct 510
|||||||||||||||||||||
Sbjct: 480 gaagtacgactgcaagatcct 500
>gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 3', mRNA sequence
Length = 699
Score = 448 bits (226), Expect = e-124
Identities = 359/402 (89%), Gaps = 1/402 (0%)
Strand = Plus / Plus
Query: 795 gccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggata 854
|||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 1 gccatggcatcagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggaca 60
Query: 855 tcaacgtcaaggactgcacgcttaagaagacggccaacggcgtccgcatcaaggcgtatg 914
||||||| |||||||| ||||| ||||||||| ||||||| |||| ||||||||||| |
Sbjct: 61 tcaacgtgaaggactgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacg 120
Query: 915 aggacgccgcctccgtgctca-ccgcctccaagatccactatgagaatatcaagatggag 973
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 aggacgccgcctccgtgctcanccgcctccaagatccactatgagaacatcaagatggag 180
Query: 974 gactcgggctaccccatcatcatcgacatgaagtactgccccaacaagttatgcaccgcc 1033
|||||| ||||||| ||||||||||||||||||||||| ||||| | |||||||||
Sbjct: 181 gactcgtcgaaccccattatcatcgacatgaagtactgccctaacaaaatctgcaccgcc 240
Query: 1034 aatggtgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcc 1093
| || ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 241 agcggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacgtcaccggcacctcc 300
Query: 1094 tccaccccggaggccgtcaacctgctctgctctgccaagatcccatgcaccggcgtcacc 1153
||| ||| |||||||||| |||||||||||| | ||||||||| ||||| |||||||||
Sbjct: 301 gccagccccgaggccgtcagcctgctctgctccgacaagatcccctgcactggcgtcacc 360
Query: 1154 atggacgacgtcaacatcaagtacagtggcaccaacaacaag 1195
||||| ||||||| || | |||||||||| |||||||||
Sbjct: 361 atggataacgtcaaggtcgaatacagtggcaaaaacaacaag 402
Score = 67.9 bits (34), Expect = 3e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1220 aagggcagcgccaagggttgcctcaaggagctcgcatgcttctaga 1265
||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 400 aagggcagcgccacaggctgcctcaaggagctcgcatgcttctaga 445
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 450,855
Number of Sequences: 832831
Number of extensions: 450855
Number of successful extensions: 132101
Number of sequences better than 0.5: 179
Number of HSP's better than 0.5 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131438
Number of HSP's gapped (non-prelim): 595
length of query: 1540
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1520
effective length of database: 474,703,049
effective search space: 721548634480
effective search space used: 721548634480
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)