BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2622915.2.2
(562 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF486159.1|CF486159 POL1_36_C08.b1_A002 Pollen Sorghum b... 317 6e-085
gb|CN127125.1|CN127125 RHOH1_21_E05.b1_A002 Acid- and alkal... 317 6e-085
gb|CN127600.1|CN127600 RHOH1_24_A08.b1_A002 Acid- and alkal... 317 6e-085
gb|CN135808.1|CN135808 OX1_39_C06.b1_A002 Oxidatively-stres... 317 6e-085
gb|CN142308.1|CN142308 WOUND1_9_D10.b1_A002 Wounded leaves ... 317 6e-085
gb|CX609713.1|CX609713 ANR1_14_G03.b1_A002 Anaerobic roots ... 317 6e-085
gb|CX621918.1|CX621918 GABR1_61_A04.b2_A002 GA- or brassino... 317 6e-085
gb|CX621919.1|CX621919 GABR1_61_A05.b2_A002 GA- or brassino... 317 6e-085
gb|CD227433.1|CD227433 CCC1_51_D09.b1_A007 Callus culture/c... 313 9e-084
gb|BE593911.1|BE593911 WS1_103_H04.g1_A002 Water-stressed 1... 295 2e-078
gb|BM328492.1|BM328492 PIC1_29_H04.g1_A002 Pathogen-infecte... 291 3e-077
gb|BG487875.1|BG487875 RHIZ2_60_D11.g1_A003 Rhizome2 (RHIZ2... 285 2e-075
gb|BG559753.1|BG559753 RHIZ2_73_C03.g1_A003 Rhizome2 (RHIZ2... 285 2e-075
gb|BI351339.1|BI351339 IP1_70_C11.b1_A002 Immature pannicle... 283 8e-075
gb|BG049176.1|BG049176 OV1_24_D10.g1_A002 Ovary 1 (OV1) Sor... 278 5e-073
gb|BG464569.1|BG464569 EM1_71_D07.g1_A002 Embryo 1 (EM1) So... 278 5e-073
gb|CD226192.1|CD226192 CCC1_44_B06.b1_A007 Callus culture/c... 278 5e-073
gb|CD235416.1|CD235416 SS1_29_F07.b1_A012 Salt-stressed see... 278 5e-073
gb|CN132247.1|CN132247 OX1_5_B02.b1_A002 Oxidatively-stress... 278 5e-073
gb|CN150289.1|CN150289 WOUND1_68_E07.b1_A002 Wounded leaves... 278 5e-073
gb|BG488061.1|BG488061 RHIZ2_62_G10.g1_A003 Rhizome2 (RHIZ2... 264 8e-069
gb|CN135891.1|CN135891 OX1_39_C06.g1_A002 Oxidatively-stres... 264 8e-069
gb|CN142381.1|CN142381 WOUND1_9_D10.g1_A002 Wounded leaves ... 264 8e-069
gb|BG465846.1|BG465846 RHIZ2_45_C07.g1_A003 Rhizome2 (RHIZ2... 260 1e-067
gb|BI351138.1|BI351138 IP1_70_C11.g1_A002 Immature pannicle... 258 5e-067
gb|CN127212.1|CN127212 RHOH1_21_E05.g3_A002 Acid- and alkal... 242 3e-062
gb|BG465902.1|BG465902 RHIZ2_46_A07.g1_A003 Rhizome2 (RHIZ2... 184 6e-045
gb|CX614641.1|CX614641 GABR1_15_G08.b1_A002 GA- or brassino... 184 6e-045
gb|CW087177.1|CW087177 104_431_10947456_116_33023_088 Sorgh... 151 8e-035
gb|CW087176.1|CW087176 104_431_10947456_114_33027_088 Sorgh... 135 5e-030
gb|CW324686.1|CW324686 104_819_11477291_148_35910_042 Sorgh... 129 3e-028
gb|CN127681.1|CN127681 RHOH1_24_A08.g3_A002 Acid- and alkal... 129 3e-028
gb|BG558687.1|BG558687 RHIZ2_59_B06.g1_A003 Rhizome2 (RHIZ2... 123 2e-026
gb|CF488868.1|CF488868 POL1_52_E10.g1_A002 Pollen Sorghum b... 115 4e-024
gb|CX609800.1|CX609800 ANR1_14_G03.g1_A002 Anaerobic roots ... 107 1e-021
gb|BG464783.1|BG464783 EM1_34_B03.g1_A002 Embryo 1 (EM1) So... 90 3e-016
gb|BG558693.1|BG558693 RHIZ2_59_C01.g1_A003 Rhizome2 (RHIZ2... 90 3e-016
gb|CF430590.1|CF430590 NIT1_3_G02.b1_A002 Nitrogen-deficien... 90 3e-016
gb|CF430623.1|CF430623 NIT1_3_B01.b1_A002 Nitrogen-deficien... 90 3e-016
gb|CF431426.1|CF431426 NIT1_7_H02.b1_A002 Nitrogen-deficien... 90 3e-016
gb|CN133434.1|CN133434 OX1_12_E06.b1_A002 Oxidatively-stres... 90 3e-016
gb|CN133512.1|CN133512 OX1_12_E06.g1_A002 Oxidatively-stres... 90 3e-016
gb|BG241509.1|BG241509 RHIZ2_50_C01.g1_A003 Rhizome2 (RHIZ2... 88 1e-015
gb|BG241491.1|BG241491 RHIZ2_50_A02.g1_A003 Rhizome2 (RHIZ2... 82 6e-014
gb|CD233128.1|CD233128 SS1_12_H08.b1_A012 Salt-stressed see... 82 6e-014
gb|CF426903.1|CF426903 PH1_2_G08.b1_A002 Phosphorous-defici... 82 6e-014
gb|CF489194.1|CF489194 POL1_55_G01.b1_A002 Pollen Sorghum b... 82 6e-014
gb|BG159402.1|BG159402 OV2_7_D09.g1_A002 Ovary 2 (OV2) Sorg... 78 1e-012
gb|CL149718.1|CL149718 104_330_10778012_114_31353_332 Sorgh... 74 2e-011
gb|CL187772.1|CL187772 104_403_10901121_116_32465_037 Sorgh... 74 2e-011
gb|CF434140.1|CF434140 NIT1_32_H01.g1_A002 Nitrogen-deficie... 68 9e-010
gb|CX621998.1|CX621998 GABR1_61_A04.g2_A002 GA- or brassino... 68 9e-010
gb|CN132323.1|CN132323 OX1_5_B02.g1_A002 Oxidatively-stress... 66 4e-009
gb|CD227449.1|CD227449 CCC1_51_D09.g1_A007 Callus culture/c... 64 1e-008
gb|CD209053.1|CD209053 HS1_45_F05.g1_A012 Heat-shocked seed... 62 6e-008
gb|CD226294.1|CD226294 CCC1_44_B06.g1_A007 Callus culture/c... 62 6e-008
gb|CN150372.1|CN150372 WOUND1_68_E07.g1_A002 Wounded leaves... 62 6e-008
gb|CX621999.1|CX621999 GABR1_61_A05.g2_A002 GA- or brassino... 60 2e-007
gb|BE594228.1|BE594228 WS1_103_H04.b1_A002 Water-stressed 1... 58 9e-007
gb|CF486239.1|CF486239 POL1_36_C08.g1_A002 Pollen Sorghum b... 48 9e-004
gb|CX614714.1|CX614714 GABR1_15_G08.g1_A002 GA- or brassino... 40 0.21
>gb|CF486159.1|CF486159 POL1_36_C08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_C08_A002 3', mRNA sequence
Length = 688
Score = 317 bits (160), Expect = 6e-085
Identities = 256/295 (86%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 332 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 275
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 274 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 215
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 214 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 155
Query: 436 ccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaac 495
||||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||
Sbjct: 154 ccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaac 95
Query: 496 agatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||||||| ||||| |||||| | | |||||||||||||||||||||||
Sbjct: 94 agatgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaaa 40
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 556 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 497
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 496 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 443
>gb|CN127125.1|CN127125 RHOH1_21_E05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_E05_A002 3', mRNA sequence
Length = 779
Score = 317 bits (160), Expect = 6e-085
Identities = 256/295 (86%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 313 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 256
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 255 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 196
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 195 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 136
Query: 436 ccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaac 495
||||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||
Sbjct: 135 ccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaac 76
Query: 496 agatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||||||| ||||| |||||| | | |||||||||||||||||||||||
Sbjct: 75 agatgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaaa 21
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 537 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 478
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 477 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 424
>gb|CN127600.1|CN127600 RHOH1_24_A08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_A08_A002 3', mRNA sequence
Length = 788
Score = 317 bits (160), Expect = 6e-085
Identities = 256/295 (86%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 344 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 287
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 286 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 227
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 226 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 167
Query: 436 ccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaac 495
||||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||
Sbjct: 166 ccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaac 107
Query: 496 agatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||||||| ||||| |||||| | | |||||||||||||||||||||||
Sbjct: 106 agatgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaaa 52
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 568 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 509
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 508 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 455
>gb|CN135808.1|CN135808 OX1_39_C06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_39_C06_A002 3', mRNA sequence
Length = 795
Score = 317 bits (160), Expect = 6e-085
Identities = 256/295 (86%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 352 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 295
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 294 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 235
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 234 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 175
Query: 436 ccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaac 495
||||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||
Sbjct: 174 ccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaac 115
Query: 496 agatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||||||| ||||| |||||| | | |||||||||||||||||||||||
Sbjct: 114 agatgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaaa 60
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 576 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 517
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 516 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 463
>gb|CN142308.1|CN142308 WOUND1_9_D10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_9_D10_A002 3', mRNA sequence
Length = 730
Score = 317 bits (160), Expect = 6e-085
Identities = 256/295 (86%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 478 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 421
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 420 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 361
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 360 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 301
Query: 436 ccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaac 495
||||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||
Sbjct: 300 ccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaac 241
Query: 496 agatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||||||| ||||| |||||| | | |||||||||||||||||||||||
Sbjct: 240 agatgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaaa 186
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 702 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 643
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 642 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 589
>gb|CX609713.1|CX609713 ANR1_14_G03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_14_G03_A002 3', mRNA sequence
Length = 776
Score = 317 bits (160), Expect = 6e-085
Identities = 256/295 (86%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 310 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 253
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 252 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 193
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 192 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 133
Query: 436 ccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaac 495
||||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||
Sbjct: 132 ccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaac 73
Query: 496 agatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||||||| ||||| |||||| | | |||||||||||||||||||||||
Sbjct: 72 agatgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaaa 18
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 534 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 475
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 474 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 421
>gb|CX621918.1|CX621918 GABR1_61_A04.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_A04_A002 3', mRNA sequence
Length = 779
Score = 317 bits (160), Expect = 6e-085
Identities = 256/295 (86%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 540 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 483
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 482 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 423
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 422 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 363
Query: 436 ccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaac 495
||||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||
Sbjct: 362 ccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaac 303
Query: 496 agatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||||||| ||||| |||||| | | |||||||||||||||||||||||
Sbjct: 302 agatgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaaa 248
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 764 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 705
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 704 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 651
>gb|CX621919.1|CX621919 GABR1_61_A05.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_A05_A002 3', mRNA sequence
Length = 681
Score = 317 bits (160), Expect = 6e-085
Identities = 256/295 (86%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 433 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 376
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 375 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 316
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 315 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 256
Query: 436 ccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaac 495
||||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||
Sbjct: 255 ccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaac 196
Query: 496 agatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||||||| ||||| |||||| | | |||||||||||||||||||||||
Sbjct: 195 agatgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaaa 141
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 657 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 598
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 597 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 544
>gb|CD227433.1|CD227433 CCC1_51_D09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_51_D09_A007 3', mRNA sequence
Length = 597
Score = 313 bits (158), Expect = 9e-084
Identities = 254/293 (86%), Gaps = 2/293 (0%)
Strand = Plus / Minus
Query: 258 cctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatgta 317
||||||||| ||||||||||||||||| | |||||||||| |||||||||||||| ||
Sbjct: 342 cctcaatgg--tctttgccttgcgataatccttgtccgtcccaaacaaccagtccatata 285
Query: 318 aacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtcatg 377
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 284 aacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtcatg 225
Query: 378 gaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatagcc 437
|||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 224 gaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatagcc 165
Query: 438 gctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaacag 497
||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||||
Sbjct: 164 gctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaacag 105
Query: 498 atgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||||| ||||| |||||| | | |||||||||||||||||||||||
Sbjct: 104 atgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaaa 52
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 568 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 509
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 508 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 455
>gb|BE593911.1|BE593911 WS1_103_H04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 637
Score = 295 bits (149), Expect = 2e-078
Identities = 225/254 (88%), Gaps = 2/254 (0%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 253 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 196
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 195 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 136
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 135 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 76
Query: 436 ccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaac 495
||||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||
Sbjct: 75 ccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaac 16
Query: 496 agatgaggnccagt 509
|||||||| |||||
Sbjct: 15 agatgagggccagt 2
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 477 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 418
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 417 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 364
>gb|BM328492.1|BM328492 PIC1_29_H04.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 504
Score = 291 bits (147), Expect = 3e-077
Identities = 223/252 (88%), Gaps = 2/252 (0%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 250 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 193
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 192 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 133
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 132 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 73
Query: 436 ccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaac 495
||||||||||| || || ||| ||| ||| ||||| ||||||||| ||||||
Sbjct: 72 ccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaac 13
Query: 496 agatgaggncca 507
|||||||| |||
Sbjct: 12 agatgagggcca 1
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 474 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 415
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 414 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 361
>gb|BG487875.1|BG487875 RHIZ2_60_D11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 634
Score = 285 bits (144), Expect = 2e-075
Identities = 180/191 (94%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||
Sbjct: 190 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccgaacaaccagtccata 133
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 132 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 73
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 72 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 13
Query: 436 ccgctgtgagc 446
|||||||||||
Sbjct: 12 ccgctgtgagc 2
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 414 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 355
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 354 aca-ggaaatcaaaatctc---aacctatagtatcgatcgtcaggcaataactgactg 301
>gb|BG559753.1|BG559753 RHIZ2_73_C03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 485
Score = 285 bits (144), Expect = 2e-075
Identities = 180/191 (94%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||
Sbjct: 229 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccgaacaaccagtccata 172
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 171 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 112
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 111 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 52
Query: 436 ccgctgtgagc 446
|||||||||||
Sbjct: 51 ccgctgtgagc 41
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 453 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 394
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 393 aca-ggaaatcaaaatctc---aacctatagtatcgatcgtcaggcaataactgactg 340
>gb|BI351339.1|BI351339 IP1_70_C11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 526
Score = 283 bits (143), Expect = 8e-075
Identities = 224/259 (86%)
Strand = Plus / Minus
Query: 292 tccgtccggaacaaccagtccatgtaaacaaatgtcgaggcatagttccctgactttgtg 351
||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 526 tccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagttccctgactttgtg 467
Query: 352 tacagcactcggtgatggtagtcatggaagtccgagccaccgtacagtggaaggaaattt 411
|||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 466 tacagcacacggtgatggtagtcatggaagtccgagccgccatacagtggcaggaaattt 407
Query: 412 gatgggctccatggaaagtgatagccgctgtgagcctcnaccgtcnnnnataccctnnnn 471
|||||||||||||| |||||||||||||||||||| || || ||| ||| |||
Sbjct: 406 gatgggctccatgggaagtgatagccgctgtgagcttcaactgtctccaatatcctcaac 347
Query: 472 accatnnacagccacanngtgaacagatgaggnccagtnngagcagnnncnncnnntgtg 531
||||| ||||||||| |||||||||||||| ||||| |||||| | | ||||
Sbjct: 346 accatccacagccacagggtgaacagatgagggccagtaagagcaggaccaaccactgtg 287
Query: 532 gcgaatcccaggaacaaaa 550
|||||||||||||||||||
Sbjct: 286 gcgaatcccaggaacaaaa 268
>gb|BG049176.1|BG049176 OV1_24_D10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 569
Score = 278 bits (140), Expect = 5e-073
Identities = 179/191 (93%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 189 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 132
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 131 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 72
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 71 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 12
Query: 436 ccgctgtgagc 446
|||||||||||
Sbjct: 11 ccgctgtgagc 1
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 413 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 354
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 353 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 300
>gb|BG464569.1|BG464569 EM1_71_D07.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 654
Score = 278 bits (140), Expect = 5e-073
Identities = 179/191 (93%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 226 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 169
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 168 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 109
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 108 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 49
Query: 436 ccgctgtgagc 446
|||||||||||
Sbjct: 48 ccgctgtgagc 38
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 450 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 391
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 390 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 337
>gb|CD226192.1|CD226192 CCC1_44_B06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_B06_A007 3', mRNA sequence
Length = 663
Score = 278 bits (140), Expect = 5e-073
Identities = 179/191 (93%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 220 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 163
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 162 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 103
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 102 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 43
Query: 436 ccgctgtgagc 446
|||||||||||
Sbjct: 42 ccgctgtgagc 32
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 444 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 385
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 384 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 331
>gb|CD235416.1|CD235416 SS1_29_F07.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_29_F07_A012 3', mRNA sequence
Length = 669
Score = 278 bits (140), Expect = 5e-073
Identities = 179/191 (93%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 228 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 171
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 170 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 111
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 110 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 51
Query: 436 ccgctgtgagc 446
|||||||||||
Sbjct: 50 ccgctgtgagc 40
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 452 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 393
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 392 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 339
>gb|CN132247.1|CN132247 OX1_5_B02.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_B02_A002 3', mRNA sequence
Length = 686
Score = 278 bits (140), Expect = 5e-073
Identities = 179/191 (93%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 220 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 163
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 162 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 103
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 102 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 43
Query: 436 ccgctgtgagc 446
|||||||||||
Sbjct: 42 ccgctgtgagc 32
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 444 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 385
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 384 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 331
>gb|CN150289.1|CN150289 WOUND1_68_E07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_68_E07_A002 3', mRNA sequence
Length = 659
Score = 278 bits (140), Expect = 5e-073
Identities = 179/191 (93%), Gaps = 2/191 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 201 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 144
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 143 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 84
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 83 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 24
Query: 436 ccgctgtgagc 446
|||||||||||
Sbjct: 23 ccgctgtgagc 13
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 425 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 366
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 365 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 312
>gb|BG488061.1|BG488061 RHIZ2_62_G10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 622
Score = 264 bits (133), Expect = 8e-069
Identities = 169/180 (93%), Gaps = 2/180 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||
Sbjct: 178 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccgaacaaccagtccata 121
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 120 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 61
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 60 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 1
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 402 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 343
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 342 aca-ggaaatcaaaatctc---aacctatagtatcgatcgtcaggcaataactgactg 289
>gb|CN135891.1|CN135891 OX1_39_C06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_39_C06_A002 5', mRNA sequence
Length = 831
Score = 264 bits (133), Expect = 8e-069
Identities = 208/241 (86%)
Strand = Plus / Minus
Query: 310 tccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatgg 369
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 831 tccatataaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatgg 772
Query: 370 tagtcatggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaag 429
|||||||||||||||||||| || |||||||| ||||||||||||||||||||||| |||
Sbjct: 771 tagtcatggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaag 712
Query: 430 tgatagccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacann 489
||||||||||||||||| || || ||| ||| ||| ||||| |||||||||
Sbjct: 711 tgatagccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagg 652
Query: 490 gtgaacagatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaa 549
|||||||||||||| ||||| |||||| | | ||||||||||||||||||||||
Sbjct: 651 gtgaacagatgagggccagtaagagcaggaccaaccattgtggcgaatcccaggaacaaa 592
Query: 550 a 550
|
Sbjct: 591 a 591
>gb|CN142381.1|CN142381 WOUND1_9_D10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_9_D10_A002 5', mRNA sequence
Length = 731
Score = 264 bits (133), Expect = 8e-069
Identities = 208/241 (86%)
Strand = Plus / Minus
Query: 310 tccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatgg 369
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 731 tccatataaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatgg 672
Query: 370 tagtcatggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaag 429
|||||||||||||||||||| || |||||||| ||||||||||||||||||||||| |||
Sbjct: 671 tagtcatggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaag 612
Query: 430 tgatagccgctgtgagcctcnaccgtcnnnnataccctnnnnaccatnnacagccacann 489
||||||||||||||||| || || ||| ||| ||| ||||| |||||||||
Sbjct: 611 tgatagccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagg 552
Query: 490 gtgaacagatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaa 549
|||||||||||||| ||||| |||||| | | ||||||||||||||||||||||
Sbjct: 551 gtgaacagatgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaa 492
Query: 550 a 550
|
Sbjct: 491 a 491
>gb|BG465846.1|BG465846 RHIZ2_45_C07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 620
Score = 260 bits (131), Expect = 1e-067
Identities = 167/178 (93%), Gaps = 2/178 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||
Sbjct: 176 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccgaacaaccagtccata 119
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 118 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 59
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgat 433
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||
Sbjct: 58 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgat 1
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 400 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 341
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 340 aca-ggaaatcaaaatctc---aacctatagtatcgatcgtcaggcaataactgactg 287
>gb|BI351138.1|BI351138 IP1_70_C11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 595
Score = 258 bits (130), Expect = 5e-067
Identities = 169/181 (93%), Gaps = 2/181 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 179 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 122
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 62
Query: 376 tggaagtccgagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatag 435
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 61 tggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatag 2
Query: 436 c 436
|
Sbjct: 1 c 1
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 403 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 344
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 343 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 290
>gb|CN127212.1|CN127212 RHOH1_21_E05.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_E05_A002 5', mRNA sequence
Length = 774
Score = 242 bits (122), Expect = 3e-062
Identities = 194/226 (85%)
Strand = Plus / Minus
Query: 325 gtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtcatggaagtcc 384
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 774 gtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtcatggaagtcc 715
Query: 385 gagccaccgtacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtga 444
||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 714 gagccgccatacagtggcaggaaatttgatgggctccatgggaagtgatagccgctgtga 655
Query: 445 gcctcnaccgtcnnnnataccctnnnnaccatnnacagccacanngtgaacagatgaggn 504
|| || || ||| ||| ||| ||||| ||||||||| ||||||||||||||
Sbjct: 654 gcttcaactgtctccaatatcctcaacaccatccacagccacagggtgaacagatgaggg 595
Query: 505 ccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
||||| |||||| | | |||||||||||||||||||||||
Sbjct: 594 ccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaaa 549
>gb|BG465902.1|BG465902 RHIZ2_46_A07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 552
Score = 184 bits (93), Expect = 6e-045
Identities = 117/124 (94%), Gaps = 2/124 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||
Sbjct: 122 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccgaacaaccagtccata 65
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 64 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 5
Query: 376 tgga 379
||||
Sbjct: 4 tgga 1
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 346 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 287
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 286 aca-ggaaatcaaaatctc---aacctatagtatcgatcgtcaggcaataactgactg 233
>gb|CX614641.1|CX614641 GABR1_15_G08.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_15_G08_A002 3', mRNA sequence
Length = 618
Score = 184 bits (93), Expect = 6e-045
Identities = 120/128 (93%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 126 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 69
Query: 316 taaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggtgatggtagtca 375
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 68 taaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatggtagtca 9
Query: 376 tggaagtc 383
||||||||
Sbjct: 8 tggaagtc 1
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 350 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 291
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 290 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 237
>gb|CW087177.1|CW087177 104_431_10947456_116_33023_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947456, DNA
sequence
Length = 726
Score = 151 bits (76), Expect = 8e-035
Identities = 82/84 (97%)
Strand = Plus / Plus
Query: 305 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 364
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 159 accagtccatataaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggt 218
Query: 365 gatggtagtcatggaagtccgagc 388
||||||||||||||||||||||||
Sbjct: 219 gatggtagtcatggaagtccgagc 242
Score = 129 bits (65), Expect = 3e-028
Identities = 128/157 (81%)
Strand = Plus / Plus
Query: 394 tacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcnacc 453
|||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 358 tacagtggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaact 417
Query: 454 gtcnnnnataccctnnnnaccatnnacagccacanngtgaacagatgaggnccagtnnga 513
||| ||| ||| ||||| ||||||||| |||||||||||||| ||||| ||
Sbjct: 418 gtctccaatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaaga 477
Query: 514 gcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||| | | |||||||||||||||||||||||
Sbjct: 478 gcaggaccaaccactgtggcgaatcccaggaacaaaa 514
Score = 50.1 bits (25), Expect = 2e-004
Identities = 46/52 (88%), Gaps = 2/52 (3%)
Strand = Plus / Plus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaacc 307
|||||||||||||| |||||||||||||| | |||||||||| |||||||
Sbjct: 26 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaacc 75
>gb|CW087176.1|CW087176 104_431_10947456_114_33027_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947456, DNA
sequence
Length = 703
Score = 135 bits (68), Expect = 5e-030
Identities = 80/84 (95%)
Strand = Plus / Minus
Query: 305 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 364
|||||||||| |||||||||||||||||||||| |||||||| |||||||||||| ||||
Sbjct: 693 accagtccatataaacaaatgtcgaggcatagtcccctgactatgtgtacagcacacggt 634
Query: 365 gatggtagtcatggaagtccgagc 388
||||||||||||||||||||||||
Sbjct: 633 gatggtagtcatggaagtccgagc 610
Score = 129 bits (65), Expect = 3e-028
Identities = 128/157 (81%)
Strand = Plus / Minus
Query: 394 tacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcnacc 453
|||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 494 tacagtggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaact 435
Query: 454 gtcnnnnataccctnnnnaccatnnacagccacanngtgaacagatgaggnccagtnnga 513
||| ||| ||| ||||| ||||||||| |||||||||||||| ||||| ||
Sbjct: 434 gtctccaatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaaga 375
Query: 514 gcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||| | | |||||||||||||||||||||||
Sbjct: 374 gcaggaccaaccactgtggcgaatcccaggaacaaaa 338
>gb|CW324686.1|CW324686 104_819_11477291_148_35910_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477291, DNA
sequence
Length = 713
Score = 129 bits (65), Expect = 3e-028
Identities = 128/157 (81%)
Strand = Plus / Plus
Query: 394 tacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcnacc 453
|||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 35 tacagtggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaact 94
Query: 454 gtcnnnnataccctnnnnaccatnnacagccacanngtgaacagatgaggnccagtnnga 513
||| ||| ||| ||||| ||||||||| |||||||||||||| ||||| ||
Sbjct: 95 gtctccaatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaaga 154
Query: 514 gcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||| | | |||||||||||||||||||||||
Sbjct: 155 gcaggaccaaccactgtggcgaatcccaggaacaaaa 191
>gb|CN127681.1|CN127681 RHOH1_24_A08.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_A08_A002 5', mRNA sequence
Length = 744
Score = 129 bits (65), Expect = 3e-028
Identities = 128/157 (81%)
Strand = Plus / Minus
Query: 394 tacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcnacc 453
|||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 739 tacagtggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaact 680
Query: 454 gtcnnnnataccctnnnnaccatnnacagccacanngtgaacagatgaggnccagtnnga 513
||| ||| ||| ||||| ||||||||| |||||||||||||| ||||| ||
Sbjct: 679 gtctccaatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaaga 620
Query: 514 gcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
|||| | | |||||||||||||||||||||||
Sbjct: 619 gcaggaccaaccactgtggcgaatcccaggaacaaaa 583
>gb|BG558687.1|BG558687 RHIZ2_59_B06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 533
Score = 123 bits (62), Expect = 2e-026
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||
Sbjct: 87 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccgaacaaccagtccata 30
Query: 316 taaacaaatgtcgaggcatagttccctga 344
|||||||||||||||||||||||||||||
Sbjct: 29 taaacaaatgtcgaggcatagttccctga 1
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 311 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 252
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 251 aca-ggaaatcaaaatctc---aacctatagtatcgatcgtcaggcaataactgactg 198
>gb|CF488868.1|CF488868 POL1_52_E10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_52_E10_A002 5', mRNA sequence
Length = 680
Score = 115 bits (58), Expect = 4e-024
Identities = 128/158 (81%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 394 tacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcnacc 453
|||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 678 tacagtggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaact 619
Query: 454 gtcnnnnata-ccctnnnnaccatnnacagccacanngtgaacagatgaggnccagtnng 512
||| ||| || | ||||| ||||||||| |||||||||||||| ||||| |
Sbjct: 618 gtctccaatatccttcaacaccatccacagccacagggtgaacagatgagggccagtaag 559
Query: 513 agcagnnncnncnnntgtggcgaatcccaggaacaaaa 550
||||| | | |||||||||||||||||||||||
Sbjct: 558 agcaggaccaaccactgtggcgaatcccaggaacaaaa 521
>gb|CX609800.1|CX609800 ANR1_14_G03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_14_G03_A002 5', mRNA sequence
Length = 744
Score = 107 bits (54), Expect = 1e-021
Identities = 123/154 (79%)
Strand = Plus / Minus
Query: 397 agtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagcctcnaccgtc 456
||||| |||||||||||||| |||||||| |||||||||||||| ||||| || || |||
Sbjct: 744 agtggcaggaaatttgatggtctccatgggaagtgatagccgctctgagcttcaactgtc 685
Query: 457 nnnnataccctnnnnaccatnnacagccacanngtgaacagatgaggnccagtnngagca 516
||| ||| ||||| ||||||||| |||||||||||||| ||||| |||||
Sbjct: 684 tccaatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagca 625
Query: 517 gnnncnncnnntgtggcgaatcccaggaacaaaa 550
| | | |||||||||||||||||||||||
Sbjct: 624 ggaccaaccactgtggcgaatcccaggaacaaaa 591
>gb|BG464783.1|BG464783 EM1_34_B03.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 299
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 251 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 192
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 191 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 138
>gb|BG558693.1|BG558693 RHIZ2_59_C01.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 378
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 158 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 99
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 98 aca-ggaaatcaaaatctc---aacctatagtatcgatcgtcaggcaataactgactg 45
>gb|CF430590.1|CF430590 NIT1_3_G02.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_3_G02_A002 3', mRNA sequence
Length = 527
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 284 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 225
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 224 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 171
Score = 54.0 bits (27), Expect = 1e-005
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccat 314
||||||||||| ||||||||||||||||| | ||||||| || ||||||||||||||
Sbjct: 60 ctcctcaatggg-tctttgccttgcgataatccttgtccggcccaaacaaccagtccat 3
>gb|CF430623.1|CF430623 NIT1_3_B01.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_3_B01_A002 3', mRNA sequence
Length = 470
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 227 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 168
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 167 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 114
>gb|CF431426.1|CF431426 NIT1_7_H02.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_7_H02_A002 3', mRNA sequence
Length = 484
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 246 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 187
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 186 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 133
>gb|CN133434.1|CN133434 OX1_12_E06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_12_E06_A002 3', mRNA sequence
Length = 533
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 290 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 231
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 230 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 177
Score = 65.9 bits (33), Expect = 4e-009
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||| ||||| ||||||||||||||
Sbjct: 66 ctcctcaatggtct--ttgccttgcgataatccttgtacgtcccaaacaaccagtccata 9
Query: 316 taaacaaa 323
||||||||
Sbjct: 8 taaacaaa 1
>gb|CN133512.1|CN133512 OX1_12_E06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_12_E06_A002 5', mRNA sequence
Length = 507
Score = 89.7 bits (45), Expect = 3e-016
Identities = 99/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 257 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 198
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 197 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 144
>gb|BG241509.1|BG241509 RHIZ2_50_C01.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 266
Score = 87.7 bits (44), Expect = 1e-015
Identities = 95/113 (84%), Gaps = 4/113 (3%)
Strand = Plus / Minus
Query: 41 attcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaacacagg 100
|||||||||||||||||||||||||||||||||||| ||||| ||||||| |
Sbjct: 122 attcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaacaca-g 64
Query: 101 gaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
|||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 63 gaaatcaaaatctc---aacctatagtatcgatcgtcaggcaataactgactg 14
>gb|BG241491.1|BG241491 RHIZ2_50_A02.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 319
Score = 81.8 bits (41), Expect = 6e-014
Identities = 98/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 120 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcataccaaac 61
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||| ||||||||||||||||
Sbjct: 60 aca-ggaaatcaaaatctc---aacctatagtatcgatcgtgaggcaataactgactg 7
>gb|CD233128.1|CD233128 SS1_12_H08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_12_H08_A012 3', mRNA sequence
Length = 511
Score = 81.8 bits (41), Expect = 6e-014
Identities = 98/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| ||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 268 atcagattcagttcatgacaaaccaaggtcgccaggacctcattcttgatcatagcaaac 209
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 208 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 155
Score = 42.1 bits (21), Expect = 0.054
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 270 ctttgccttgcgataaccattgtccgtcc 298
|||||||||||||||| | ||||||||||
Sbjct: 32 ctttgccttgcgataatccttgtccgtcc 4
>gb|CF426903.1|CF426903 PH1_2_G08.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_2_G08_A002 3', mRNA sequence
Length = 618
Score = 81.8 bits (41), Expect = 6e-014
Identities = 98/118 (83%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaac 95
|||| ||||||||||||||||||||||| |||||||||||| ||||| ||||
Sbjct: 291 atcagattcagttcatgacagaccaagggcgccaggacctcattcttgatcatagcaaac 232
Query: 96 acagggaaatcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||| ||||||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 231 aca-ggaaatcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 178
Score = 75.8 bits (38), Expect = 4e-012
Identities = 62/69 (89%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 256 ctcctcaatggtctctttgccttgcgataaccattgtccgtccggaacaaccagtccatg 315
|||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 67 ctcctcaatggtct--ttgccttgcgataatccttgtccgtcccaaacaaccagtccata 10
Query: 316 taaacaaat 324
|||||||||
Sbjct: 9 taaacaaat 1
>gb|CF489194.1|CF489194 POL1_55_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_G01_A002 3', mRNA sequence
Length = 226
Score = 81.8 bits (41), Expect = 6e-014
Identities = 92/110 (83%), Gaps = 4/110 (3%)
Strand = Plus / Minus
Query: 44 cagttcatgacagaccaaggtcgccaggacctcgttcttnnnnnnnnnaaacacagggaa 103
||||||||||||||||||||||||||||||||| ||||| ||||||| ||||
Sbjct: 226 cagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaacaca-ggaa 168
Query: 104 atcaacatctcaggagcctatagtattggtcgtcaggcaataactgactg 153
||||| ||||| | |||||||||| | |||||||||||||||||||||
Sbjct: 167 atcaaaatctc---aacctatagtatggatcgtcaggcaataactgactg 121
>gb|BG159402.1|BG159402 OV2_7_D09.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 155
Score = 77.8 bits (39), Expect = 1e-012
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 36 atcaaattcagttcatgacagaccaaggtcgccaggacctcgttctt 82
|||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 76 atcagattcagttcatgacagaccaaggtcgccaggacctcattctt 30
>gb|CL149718.1|CL149718 104_330_10778012_114_31353_332 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778012, DNA
sequence
Length = 725
Score = 73.8 bits (37), Expect = 2e-011
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 394 tacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagc 446
||||| || ||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 495 tacagcggcaggaaatttgatgggctccatgggaagtgatagacgctgtgagc 443
Score = 48.1 bits (24), Expect = 9e-004
Identities = 49/61 (80%)
Strand = Plus / Minus
Query: 490 gtgaacagatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaa 549
|||||||||||||| ||||| |||||| | ||||||||||||||||||||||
Sbjct: 404 gtgaacagatgagggccagtgagagcaggattgacaactgtggcgaatcccaggaacaaa 345
Query: 550 a 550
|
Sbjct: 344 a 344
>gb|CL187772.1|CL187772 104_403_10901121_116_32465_037 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901121, DNA
sequence
Length = 664
Score = 73.8 bits (37), Expect = 2e-011
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 394 tacagtggaaggaaatttgatgggctccatggaaagtgatagccgctgtgagc 446
||||| || ||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 122 tacagcggcaggaaatttgatgggctccatgggaagtgatagacgctgtgagc 174
Score = 48.1 bits (24), Expect = 9e-004
Identities = 49/61 (80%)
Strand = Plus / Plus
Query: 490 gtgaacagatgaggnccagtnngagcagnnncnncnnntgtggcgaatcccaggaacaaa 549
|||||||||||||| ||||| |||||| | ||||||||||||||||||||||
Sbjct: 213 gtgaacagatgagggccagtgagagcaggattgacaactgtggcgaatcccaggaacaaa 272
Query: 550 a 550
|
Sbjct: 273 a 273
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 82,595
Number of Sequences: 832831
Number of extensions: 82595
Number of successful extensions: 21732
Number of sequences better than 0.5: 61
Number of HSP's better than 0.5 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21485
Number of HSP's gapped (non-prelim): 171
length of query: 562
length of database: 491,359,669
effective HSP length: 19
effective length of query: 543
effective length of database: 475,535,880
effective search space: 258215982840
effective search space used: 258215982840
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)