BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576887.2.1
(1138 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN125196.1|CN125196 RHOH1_9_C12.g1_A002 Acid- and alkali... 1201 0.0
gb|CF427912.1|CF427912 PH1_11_E11.g1_A002 Phosphorous-defic... 1185 0.0
gb|CN135382.1|CN135382 OX1_32_A10.g1_A002 Oxidatively-stres... 1170 0.0
gb|CX607577.1|CX607577 ANR1_29_B11.g1_A002 Anaerobic roots ... 1150 0.0
gb|CN142030.1|CN142030 WOUND1_3_A05.g1_A002 Wounded leaves ... 1148 0.0
gb|CX613710.1|CX613710 GABR1_9_F05.g1_A002 GA- or brassinol... 1025 0.0
gb|CF427100.1|CF427100 PH1_3_G05.g1_A002 Phosphorous-defici... 1009 0.0
gb|AW671991.1|AW671991 LG1_353_B05.b1_A002 Light Grown 1 (L... 989 0.0
gb|CD231761.1|CD231761 SS1_23_G05.g1_A012 Salt-stressed see... 918 0.0
gb|CN133430.1|CN133430 OX1_12_E02.b1_A002 Oxidatively-stres... 890 0.0
gb|BG102327.1|BG102327 RHIZ2_24_H10.b1_A003 Rhizome2 (RHIZ2... 878 0.0
gb|BE595388.1|BE595388 PI1_53_F06.b1_A002 Pathogen induced ... 753 0.0
gb|BM317485.1|BM317485 LG1_332_C01.b9_A002 Light Grown 1 (L... 731 0.0
gb|CN125135.1|CN125135 RHOH1_9_C12.b1_A002 Acid- and alkali... 688 0.0
gb|CF482072.1|CF482072 POL1_76_H08.b1_A002 Pollen Sorghum b... 650 0.0
gb|CN135314.1|CN135314 OX1_32_A10.b1_A002 Oxidatively-stres... 634 e-180
gb|BF656972.1|BF656972 OV2_19_D05.b1_A002 Ovary 2 (OV2) Sor... 617 e-174
gb|BG102108.1|BG102108 RHIZ2_24_H10.g1_A003 Rhizome2 (RHIZ2... 567 e-160
gb|CF756997.1|CF756997 DSAF1_12_D02.g1_A011 Drought-stresse... 563 e-158
gb|CX613622.1|CX613622 GABR1_9_F05.b1_A002 GA- or brassinol... 555 e-156
gb|AW286395.1|AW286395 LG1_332_C01.g1_A002 Light Grown 1 (L... 545 e-153
gb|CN141958.1|CN141958 WOUND1_3_A05.b1_A002 Wounded leaves ... 541 e-152
gb|CF431798.1|CF431798 NIT1_9_G08.b1_A002 Nitrogen-deficien... 507 e-142
gb|BE358188.1|BE358188 DG1_26_B12.b2_A002 Dark Grown 1 (DG1... 406 e-111
gb|CF430340.1|CF430340 PH1_27_B02.g1_A002 Phosphorous-defic... 373 e-101
gb|BM328679.1|BM328679 PIC1_25_C04.g1_A002 Pathogen-infecte... 361 9e-098
gb|CF426989.1|CF426989 PH1_3_G05.b1_A002 Phosphorous-defici... 353 2e-095
gb|CX607493.1|CX607493 ANR1_29_B11.b1_A002 Anaerobic roots ... 331 8e-089
gb|CF427874.1|CF427874 PH1_11_E11.b1_A002 Phosphorous-defic... 325 5e-087
gb|BE593917.1|BE593917 WS1_104_A01.g1_A002 Water-stressed 1... 319 3e-085
gb|BE594237.1|BE594237 WS1_104_A01.b1_A002 Water-stressed 1... 319 3e-085
gb|CW151502.1|CW151502 104_552_11143975_116_36315_026 Sorgh... 311 8e-083
gb|CW151503.1|CW151503 104_552_11143975_148_36316_026 Sorgh... 311 8e-083
gb|BE595576.1|BE595576 PI1_53_F06.g1_A002 Pathogen induced ... 305 5e-081
gb|CN150542.1|CN150542 WOUND1_69_H01.g1_A002 Wounded leaves... 283 2e-074
gb|CF760593.1|CF760593 DSAF1_63_C10.b1_A011 Drought-stresse... 248 1e-063
gb|BF656674.1|BF656674 OV2_19_D05.g1_A002 Ovary 2 (OV2) Sor... 240 2e-061
gb|CD231680.1|CD231680 SS1_23_G05.b1_A012 Salt-stressed see... 204 1e-050
gb|CW238422.1|CW238422 104_695_11216721_148_37525_043 Sorgh... 172 5e-041
gb|CD430330.1|CD430330 ETH1_18_D11.b1_A002 Ethylene-treated... 172 5e-041
gb|CD430374.1|CD430374 ETH1_18_D11.g1_A002 Ethylene-treated... 172 5e-041
gb|CN129354.1|CN129354 RHOH1_35_A10.b3_A002 Acid- and alkal... 172 5e-041
gb|CW235727.1|CW235727 104_691_11215161_148_37401_043 Sorgh... 170 2e-040
gb|CW145571.1|CW145571 104_538_11138537_116_34978_077 Sorgh... 157 3e-036
gb|CW407710.1|CW407710 fsbb001f101e22k0 Sorghum methylation... 157 3e-036
gb|DR831457.2|DR831457 MT31 Sorghum bicolor greenbug-respon... 157 3e-036
gb|CW039948.1|CW039948 104_272_10505786_115_30390 Sorghum m... 139 6e-031
gb|CL160944.1|CL160944 104_352_10805364_114_31826_036 Sorgh... 133 4e-029
gb|CW212675.1|CW212675 104_643_11191147_148_37023_066 Sorgh... 133 4e-029
gb|CW489885.1|CW489885 fsbb001f275b01k0 Sorghum methylation... 133 4e-029
gb|CW243998.1|CW243998 104_704_11220351_148_37578_052 Sorgh... 131 2e-028
gb|CN124028.1|CN124028 RHOH1_2_E03.b1_A002 Acid- and alkali... 131 2e-028
gb|CW329025.1|CW329025 104_825_11479623_116_35999_058 Sorgh... 127 2e-027
gb|CW329026.1|CW329026 104_825_11479623_148_36000_058 Sorgh... 127 2e-027
gb|CL160945.1|CL160945 104_352_10805364_116_31827_036 Sorgh... 113 4e-023
gb|CW243997.1|CW243997 104_704_11220351_116_37577_052 Sorgh... 101 1e-019
gb|BE594091.1|BE594091 WS1_102_B01.b1_A002 Water-stressed 1... 74 3e-011
gb|CW407709.1|CW407709 fsbb001f101e22f0 Sorghum methylation... 72 1e-010
gb|CL160029.1|CL160029 104_350_10804684_116_31823_124 Sorgh... 70 5e-010
gb|CW186585.1|CW186585 104_604_11166646_116_36708_085 Sorgh... 66 8e-009
gb|CW235726.1|CW235726 104_691_11215161_116_37404_043 Sorgh... 66 8e-009
gb|AW287394.2|AW287394 LG1_303_D03.b1_A002 Light Grown 1 (L... 66 8e-009
gb|AW287411.2|AW287411 LG1_303_F03.b1_A002 Light Grown 1 (L... 66 8e-009
gb|CN129443.1|CN129443 RHOH1_35_A10.g1_A002 Acid- and alkal... 66 8e-009
gb|CW145572.1|CW145572 104_538_11138537_148_34982_077 Sorgh... 58 2e-006
gb|CW489884.1|CW489884 fsbb001f275b01f0 Sorghum methylation... 54 3e-005
gb|CW021825.1|CW021825 104_160_10431483_1_30004 Sorghum met... 44 0.028
gb|CF759639.1|CF759639 DSAF1_47_G11.b1_A011 Drought-stresse... 44 0.028
gb|BZ335052.1|BZ335052 hx95b11.g1 WGS-SbicolorF (JM107 adap... 40 0.44
gb|CW178349.1|CW178349 104_592_11159511_148_36598_064 Sorgh... 40 0.44
gb|CW220452.1|CW220452 104_655_11197357_116_37153_061 Sorgh... 40 0.44
gb|CW220497.1|CW220497 104_655_11197381_116_37157_061 Sorgh... 40 0.44
gb|CW293616.1|CW293616 104_774_11414749_148_35600_059 Sorgh... 40 0.44
gb|CW342423.1|CW342423 104_844_11486862_148_36179_027 Sorgh... 40 0.44
gb|CW390698.1|CW390698 fsbb001f076h12k0 Sorghum methylation... 40 0.44
>gb|CN125196.1|CN125196 RHOH1_9_C12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_9_C12_A002 5', mRNA sequence
Length = 816
Score = 1201 bits (606), Expect = 0.0
Identities = 681/706 (96%)
Strand = Plus / Plus
Query: 135 cctgggcagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccgg 194
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 111 cctgggcagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccgg 170
Query: 195 caccatctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagcc 254
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 171 caccatctgcgcctccacccgccactgctgcgccagcaacggctgctgccgctcggagcc 230
Query: 255 gctccagacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gctccagacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtc 290
Query: 315 gtgctgccgccgcacccaattcgagatggacaagatattgccactgaaggaggtgcttga 374
||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |
Sbjct: 291 gtgctgccgccgcacccaattcgagctggacaagatattgccactgatggaggtgcttaa 350
Query: 375 caagtactggccgtccctctactgctccaaatctggaacatgcttcagcggcaagggact 434
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 351 taagtactggccgtccctctactgctccaaatctggaacttgcttcagcggcaagggact 410
Query: 435 cttctgggctcacgagtgggagaaacatggaacctgctctgcccctgtggttcaggatga 494
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 411 cttctgggctcacgagtgggagaagcatggaacctgctctgcccctgtggttcaggatga 470
Query: 495 attacagtatttcacccttgcccttgacctctactccaagtataacgttacggaaatgct 554
| |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 471 actacagtatttcaccattgcccttgacctctacttcaagtataacgttacagaaatgct 530
Query: 555 gtcaagtggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcga 614
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gtcaagtggaggaatacaagtttcaaatggtaaggaatatgcactgagcgatgtcatcga 590
Query: 615 taccatcaaacatgcttttgggggatcaccacaaattgtttgcaagaggggttcaatcga 674
||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |
Sbjct: 591 taccatcaaacatgcttttgggggatcaccacaaattgtttgcaagaatggttcagtcca 650
Query: 675 agaacttaggttatgcttcgacaaagaattgaagcctcgtgattgccttaccacttcttt 734
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 651 agaacttaggttatgcttcgacaaagaattgaagcctcgtgattgtcttactacttcttt 710
Query: 735 ggcgaatggaagtgtatcaaaaagcaagcactgcccgcggtacatcaccttgccaacgta 794
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 711 gacgaatggaagtgtatcaaaaagcaagcactgcccacggtacatcaccttgccaacata 770
Query: 795 tgatccccttgtgcttgccaattcaactgtagagatcatgacacag 840
||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 771 tgatccccttgtgcttgccaattcaactgtagaaatcatgtcacag 816
Score = 103 bits (52), Expect = 4e-020
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 18 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 77
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggc 120
|| |||||||||||||||| ||| |||| ||||||||||
Sbjct: 78 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggc 117
>gb|CF427912.1|CF427912 PH1_11_E11.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_11_E11_A002 5', mRNA sequence
Length = 776
Score = 1185 bits (598), Expect = 0.0
Identities = 711/749 (94%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 28 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 87
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 88 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 147
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 148 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 207
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagccgctcca 260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 208 ctgcgcctccacccgccactgctgcgccagcaacggctgctgccgctcggagccgctcca 267
Query: 261 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 327
Query: 321 ccgccgcacccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagta 380
||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||
Sbjct: 328 ccgccgcacccaattcgagctggacaagatattgccactgatggaggtgcttaataagta 387
Query: 381 ctggccgtccctctactgctccaaatctggaacatgcttcagcggcaagggactcttctg 440
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 388 ctggccgtccctctactgctccaaatctggaacttgcttcagcggcaagggactcttctg 447
Query: 441 ggctcacgagtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattaca 500
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 448 ggctcacgagtgggagaagcatggaacctgctctgcccctgtggttcaggatgaactaca 507
Query: 501 gtatttcacccttgcccttgacctctactccaagtataacgttacggaaatgctgtcaag 560
|||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 508 gtatttcaccattgcccttgacctctacttcaagtataacgttacagaaatgctgtcaag 567
Query: 561 tggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccat 620
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tggaggaatacaagtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccat 627
Query: 621 caaacatgcttttgggggatcaccacaaattgtttgcaagaggggttcaatcgaagaact 680
||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||
Sbjct: 628 caaacatgcttttgggggatcaccacaaattgtttgcaagaatggttcagtccaagaact 687
Query: 681 taggttatgcttcgacaaagaattgaagcctcgtgattgccttaccacttctttggcgaa 740
|||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 688 tagggtatgcttcgacnaagaattgaagcctcgtgattgtcttactacttctttgacgaa 747
Query: 741 tggaagtgtatcaaaaagcaagcactgcc 769
|||||||||||||||||||||||||||||
Sbjct: 748 tggaagtgtatcaaaaagcaagcactgcc 776
>gb|CN135382.1|CN135382 OX1_32_A10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_32_A10_A002 5', mRNA sequence
Length = 761
Score = 1170 bits (590), Expect = 0.0
Identities = 672/698 (96%), Gaps = 1/698 (0%)
Strand = Plus / Plus
Query: 150 gcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccatctgcgcctc 209
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 64 gcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccatctgcgcctc 123
Query: 210 cacccgccactgctgcgccaccaacggctgctgccgctcggagccgctccagacgttcac 269
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 124 cacccgccactgctgcgccagcaacggctgctgccgctcggagccgctccagacgttcac 183
Query: 270 gatccacgggctatggccggactacgacgacgggacctggccgtcgtgctgccgccgcac 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gatccacgggctatggccggactacgacgacgggacctggccgtcgtgctgccgccgcac 243
Query: 330 ccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagtactggccgtc 389
|||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 244 ccaattcgagctggacaagatattgccactgatggaggtgcttaataagtactggccgtc 303
Query: 390 cctctactgctccaaatctggaacatgcttcagcggcaagggactcttctgggctcacga 449
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 304 cctctactgctccaaatctggaacttgcttcagcggcaagggactcttctgggctcacga 363
Query: 450 gtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattacagtatttcac 509
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 364 gtgggagaagcatggaacctgctctgcccctgtggttcaggatgaactacagtatttcac 423
Query: 510 ccttgcccttgacctctactccaagtataacgttacggaaatgctgtcaagtggagggat 569
| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||
Sbjct: 424 cattgcccttgacctctacttcaagtataacgttacagaaatgctgtcaagtggaggaat 483
Query: 570 acaggtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccatcaaacatgc 629
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 acaagtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccatcaaacatgc 543
Query: 630 -ttttgggggatcaccacaaattgtttgcaagaggggttcaatcgaagaacttaggttat 688
|||||||||||||||||||||||||||||||| |||||| || |||||||||||||||
Sbjct: 544 nttttgggggatcaccacaaattgtttgcaagaatggttcagtccaagaacttaggttat 603
Query: 689 gcttcgacaaagaattgaagcctcgtgattgccttaccacttctttggcgaatggaagtg 748
||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||
Sbjct: 604 gcttcgacaaagaattgaagcctcgtgattgtcttactacttctttgacgaatggaagtg 663
Query: 749 tatcaaaaagcaagcactgcccgcggtacatcaccttgccaacgtatgatccccttgtgc 808
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 664 tatcaaaaagcaagcactgcccacggtacatcaccttgccaacatatgatccccttgtgc 723
Query: 809 ttgccaattcaactgtagagatcatgacacagttcgat 846
||||||||||||||||||| |||||| |||||||||||
Sbjct: 724 ttgccaattcaactgtagaaatcatgtcacagttcgat 761
Score = 42.1 bits (21), Expect = 0.11
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggc 65
||||||||| |||| ||| |||||||||||| ||||| ||||||
Sbjct: 21 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggc 65
>gb|CX607577.1|CX607577 ANR1_29_B11.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_B11_A002 5', mRNA sequence
Length = 749
Score = 1150 bits (580), Expect = 0.0
Identities = 694/732 (94%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 18 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 77
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 78 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 137
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 138 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 197
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagccgctcca 260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 198 ctgcgcctccacccgccactgctgcgccagcaacggctgctgccgctcggagccgctcca 257
Query: 261 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 258 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgcgctg 317
Query: 321 ccgccgcacccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagta 380
||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||
Sbjct: 318 ccgccgcacccaattcgagctggacaagatattgccactgatggaggtgcttaataagta 377
Query: 381 ctggccgtccctctactgctccaaatctggaacatgcttcagcggcaagggactcttctg 440
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 378 ctggccgtccctctactgctccaaatctggaacttgcttcagcggcaagggactcttctg 437
Query: 441 ggctcacgagtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattaca 500
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 438 ggctcacgagtgggagaagcatggaacctgctctgcccctgtggttcaggatgaactaca 497
Query: 501 gtatttcacccttgcccttgacctctactccaagtataacgttacggaaatgctgtcaag 560
|||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 498 gtatttcaccattgcccttgacctctacttcaagtataacgttacagaaatgctgtcaag 557
Query: 561 tggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccat 620
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tggaggaatacaagtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccat 617
Query: 621 caaacatgcttttgggggatcaccacaaattgtttgcaagaggggttcaatcgaagaact 680
||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||
Sbjct: 618 caaacatgcttttgggggatcaccacaaattgtttgcaagaatggttcagtccaagaact 677
Query: 681 taggttatgcttcgacaaagaattgaagcctcgtgattgccttaccacttctttggcgaa 740
|| |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 678 tacgttatgcttcgacaaagaattgaagcctcgtgattgtcttactacttctttgacgaa 737
Query: 741 tggaagtgtatc 752
||||||||||||
Sbjct: 738 tggaagtgtatc 749
>gb|CN142030.1|CN142030 WOUND1_3_A05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_3_A05_A002 5', mRNA sequence
Length = 768
Score = 1148 bits (579), Expect = 0.0
Identities = 694/731 (94%), Gaps = 1/731 (0%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 38 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 97
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 98 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 157
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 158 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 217
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagccgctcca 260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 218 ctgcgcctccacccgccactgctgcgccagcaacggctgctgccgctcggagccgctcca 277
Query: 261 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 337
Query: 321 ccgccgcacccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagta 380
||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||
Sbjct: 338 ccgccgcacccaattcgagctggacaagatattgccactgatggaggtgcttaataagta 397
Query: 381 ctggccgtccctctactgctccaaatctggaacatgcttcagcggcaagggactcttctg 440
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 398 ctggccgtccctctactgctccaaatctggaacttgcttcagcggcaagggactcttctg 457
Query: 441 ggctcacgagtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattaca 500
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 458 ggctcacgagtgggagaagcatggaacctgctctgcccctgtggttcaggatgaactaca 517
Query: 501 gtatttcacccttgcccttgacctctactccaagtataacgttacggaaatgctgtcaag 560
|||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 518 gtatttcaccattgcccttgacctctacttcaagtataacgttacagaaatgctgtcaag 577
Query: 561 tggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccat 620
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tggaggaatacaagtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccat 637
Query: 621 caaacatgc-ttttgggggatcaccacaaattgtttgcaagaggggttcaatcgaagaac 679
||||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||
Sbjct: 638 caaacatgcnttttgggggatcaccacaaattgtttgcaagaatggttcagtccaagaac 697
Query: 680 ttaggttatgcttcgacaaagaattgaagcctcgtgattgccttaccacttctttggcga 739
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||
Sbjct: 698 ttaggttatgcttcgacaaagaattgaagcctcgtgattgtcttactacttctttgacga 757
Query: 740 atggaagtgta 750
|||||||||||
Sbjct: 758 atggaagtgta 768
>gb|CX613710.1|CX613710 GABR1_9_F05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_F05_A002 5', mRNA sequence
Length = 653
Score = 1025 bits (517), Expect = 0.0
Identities = 607/637 (95%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 17 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 76
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 77 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 136
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 137 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 196
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagccgctcca 260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 197 ctgcgcctccacccgccactgctgcgccagcaacggctgctgccgctcggagccgctcca 256
Query: 261 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 320
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 316
Query: 321 ccgccgcacccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagta 380
||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||
Sbjct: 317 ccgccgcacccaattcgagctggacaagatattgccactgatggaggtgcttaataagta 376
Query: 381 ctggccgtccctctactgctccaaatctggaacatgcttcagcggcaagggactcttctg 440
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 377 ctggccgtccctctactgctccaaatctggaacttgcttcagcggcaagggactcttctg 436
Query: 441 ggctcacgagtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattaca 500
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 437 ggctcacgagtgggagaagcatggaacctgctctgcccctgtggttcaggatgaactaca 496
Query: 501 gtatttcacccttgcccttgacctctactccaagtataacgttacggaaatgctgtcaag 560
|||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 497 gtatttcaccattgcccttgacctctacttcaagtataacgttacagaaatgctgtcaag 556
Query: 561 tggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccat 620
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tggaggaatacaagtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccat 616
Query: 621 caaacatgcttttgggggatcaccacaaattgtttgc 657
|||||||||||||||||||||||||||||||||||||
Sbjct: 617 caaacatgcttttgggggatcaccacaaattgtttgc 653
>gb|CF427100.1|CF427100 PH1_3_G05.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_3_G05_A002 5', mRNA sequence
Length = 658
Score = 1009 bits (509), Expect = 0.0
Identities = 606/637 (95%), Gaps = 1/637 (0%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 22 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 81
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 82 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 141
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 142 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 201
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagccgctcca 260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 202 ctgcgcctccacccgccactgctgcgccagcaacggctgctgccgctcggagccgctcca 261
Query: 261 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 321
Query: 321 ccgccgcacccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagta 380
||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||
Sbjct: 322 ccgccgcacccaattcgagctggacaagatattgccactgatggaggtgcttaataagta 381
Query: 381 ctggccgtccctctactgctccaaatctggaacatgcttcagcggcaagggactcttctg 440
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 382 ctggccgtccctctactgctccaaatctggaacttgcttcagcggcaagggactcttctg 441
Query: 441 ggctcacgagtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattaca 500
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 442 ggctcacgagtgggagaagcatggaacctgctctgcccctgtggttcaggatgaactaca 501
Query: 501 gtatttcacccttgcccttgacctctactccaagtataacgttacggaaatgctgtcaag 560
|||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 502 gtatttcaccattgcccttgacctctacttcaagtataacgttacagaaatgctgtcaag 561
Query: 561 tggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccat 620
|||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 562 tggaggaatacaagtttcaaatggtaaagaatatgcactgagcgatgtcatcgataccat 621
Query: 621 caaacat-gcttttgggggatcaccacaaattgtttg 656
||||||| |||||||||||||||||||||||||||||
Sbjct: 622 caaacatggcttttgggggatcaccacaaattgtttg 658
>gb|AW671991.1|AW671991 LG1_353_B05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 614
Score = 989 bits (499), Expect = 0.0
Identities = 574/599 (95%)
Strand = Plus / Plus
Query: 41 aggcgatgacgatggcgacgaaggcggcgtgcgtgctggcggtgtgggtgctcgtcgcct 100
|||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||||||
Sbjct: 16 aggcgatgacgacggcgaggaaggcagcgtgcgtgctggcggcgtgggtgctcgtcgccg 75
Query: 101 cgggcctgtgcgacctgggctcagcgcgcgcgcccctgggcagcaagccgcagcgggagt 160
||| |||| |||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 76 cggctctgtccgacctgggctccgcccgcgcacccctgggcagcaagccgcagcgggagt 135
Query: 161 tcgactacttcgcgctctccctccagtggcccggcaccatctgcgcctccacccgccact 220
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 136 tcgactacttcgcgctctccctgcagtggcccggcaccatctgcgcctccacccgccact 195
Query: 221 gctgcgccaccaacggctgctgccgctcggagccgctccagacgttcacgatccacgggc 280
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gctgcgccagcaacggctgctgccgctcggagccgctccagacgttcacgatccacgggc 255
Query: 281 tatggccggactacgacgacgggacctggccgtcgtgctgccgccgcacccaattcgaga 340
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tatggccggactacgacgacgggacctggccgtcgtgctgccgccgcacccaattcgagc 315
Query: 341 tggacaagatattgccactgaaggaggtgcttgacaagtactggccgtccctctactgct 400
||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||
Sbjct: 316 tggacaagatattgccactgatggaggtgcttaataagtactggccgtccctctactgct 375
Query: 401 ccaaatctggaacatgcttcagcggcaagggactcttctgggctcacgagtgggagaaac 460
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 376 ccaaatctggaacttgcttcagcggcaagggactcttctgggctcacgagtgggagaagc 435
Query: 461 atggaacctgctctgcccctgtggttcaggatgaattacagtatttcacccttgcccttg 520
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 436 atggaacctgctctgcccctgtggttcaggatgaactacagtatttcaccattgcccttg 495
Query: 521 acctctactccaagtataacgttacggaaatgctgtcaagtggagggatacaggtttcaa 580
||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 496 acctctacttcaagtataacgttacagaaatgctgtcaagtggaggaatacaagtttcaa 555
Query: 581 atggtaaggaatatgcactgagcgatgtcatcgataccatcaaacatgcttttggggga 639
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atggtaaggaatatgcactgagcgatgtcatcgataccatcaaacatgcttttggggga 614
>gb|CD231761.1|CD231761 SS1_23_G05.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_G05_A012 5', mRNA sequence
Length = 655
Score = 918 bits (463), Expect = 0.0
Identities = 511/527 (96%)
Strand = Plus / Plus
Query: 135 cctgggcagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccgg 194
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 118 cctgggcagcaagccgcagcgggagtccgactacttcgcgctctccctgcagtggcccgg 177
Query: 195 caccatctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagcc 254
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 178 caccatctgcgcctccacccgccactgctgcgccagcaacggctgctgccgctcggagcc 237
Query: 255 gctccagacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gctccagacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtc 297
Query: 315 gtgctgccgccgcacccaattcgagatggacaagatattgccactgaaggaggtgcttga 374
||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |
Sbjct: 298 gtgctgccgccgcacccaattcgagctggacaagatattgccactgatggaggtgcttaa 357
Query: 375 caagtactggccgtccctctactgctccaaatctggaacatgcttcagcggcaagggact 434
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 358 taagtactggccgtccctctactgctccaaatctggaacttgcttcagcggcaagggact 417
Query: 435 cttctgggctcacgagtgggagaaacatggaacctgctctgcccctgtggttcaggatga 494
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 418 cttctgggctcacgagtgggagaagcatggaacctgctctgcccctgtggttcaggatga 477
Query: 495 attacagtatttcacccttgcccttgacctctactccaagtataacgttacggaaatgct 554
| |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 478 actacagtatttcaccattgcccttgacctctacttcaagtataacgttacagaaatgct 537
Query: 555 gtcaagtggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcga 614
|||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 538 gtcaagtggaggaatacaagtttcaaatggtaagggatatgcactgagcgatgtcatcga 597
Query: 615 taccatcaaacatgcttttgggggatcaccacaaattgtttgcaaga 661
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 taccatcaaacatgcttttgggggatcaccacaaattgtttgcaaga 644
Score = 103 bits (52), Expect = 4e-020
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 25 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 84
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggc 120
|| |||||||||||||||| ||| |||| ||||||||||
Sbjct: 85 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggc 124
>gb|CN133430.1|CN133430 OX1_12_E02.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_12_E02_A002 3', mRNA sequence
Length = 769
Score = 890 bits (449), Expect = 0.0
Identities = 527/553 (95%)
Strand = Plus / Plus
Query: 330 ccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagtactggccgtc 389
|||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||||||
Sbjct: 1 ccaattcgagctggacaagatattgccactgatggaggtgcttaataagtactggccgtc 60
Query: 390 cctctactgctccaaatctggaacatgcttcagcggcaagggactcttctgggctcacga 449
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 cctctactgctccaaatctggaacttgcttcagcggcaagggactcttctgggctcacga 120
Query: 450 gtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattacagtatttcac 509
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 gtgggagaagcatggaacctgctctgcccctgtggttcaggatgaactacagtatttcac 180
Query: 510 ccttgcccttgacctctactccaagtataacgttacggaaatgctgtcaagtggagggat 569
| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||
Sbjct: 181 cattgcccttgacctctacttcaagtataacgttacagaaatgctgtcaagtggaggaat 240
Query: 570 acaggtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccatcaaacatgc 629
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaagtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccatcaaacatgc 300
Query: 630 ttttgggggatcaccacaaattgtttgcaagaggggttcaatcgaagaacttaggttatg 689
|||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||
Sbjct: 301 ttttgggggatcaccacaaattgtttgcaagaatggttcagtccaagaacttaggttatg 360
Query: 690 cttcgacaaagaattgaagcctcgtgattgccttaccacttctttggcgaatggaagtgt 749
|||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||
Sbjct: 361 cttcgacaaagaattgaagcctcgtgattgtcttactacttctttgacgaatggaagtgt 420
Query: 750 atcaaaaagcaagcactgcccgcggtacatcaccttgccaacgtatgatccccttgtgct 809
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 421 atcaaaaagcaagcactgcccacggtacatcaccttgccaacatatgatccccttgtgct 480
Query: 810 tgccaattcaactgtagagatcatgacacagttcgatgaatttgaggtgcctgcagctct 869
|||||||||||||||||| |||||| |||||||||||||||||| ||||||| | |||||
Sbjct: 481 tgccaattcaactgtagaaatcatgtcacagttcgatgaatttgtggtgcctactgctct 540
Query: 870 ttatacagcctaa 882
|||||||||||||
Sbjct: 541 ttatacagcctaa 553
Score = 83.8 bits (42), Expect = 3e-014
Identities = 107/126 (84%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttat-cctgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| | ||||| || ||||
Sbjct: 645 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatgttca 704
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||| ||||| || | |||| |||||| ||||||||||
Sbjct: 705 accatttgtacatgcacacttgaaggagaattg-tacttttttaacctggaaatttataa 763
Query: 1017 gcttta 1022
||||||
Sbjct: 764 gcttta 769
>gb|BG102327.1|BG102327 RHIZ2_24_H10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 573
Score = 878 bits (443), Expect = 0.0
Identities = 530/559 (94%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 15 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 74
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 75 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 134
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 135 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 194
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagccgctcca 260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 195 ctgcgcctccacccgccactgctgcgccagcaacggctgctgccgctcggagccgctcca 254
Query: 261 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 314
Query: 321 ccgccgcacccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagta 380
||||||||||||||||||| ||||||||||||||||||||| || ||||||| | |||||
Sbjct: 315 ccgccgcacccaattcgagctggacaagatattgccactgatggtggtgcttaataagta 374
Query: 381 ctggccgtccctctactgctccaaatctggaacatgcttcagcggcaagggactcttctg 440
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 375 ctggccgtccctctactgctccaaatctggaacttgcttcagcggcaagggactcttctg 434
Query: 441 ggctcacgagtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattaca 500
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 435 ggctcacgagtgggagaagcatggaacctgctctgcccctgtggttcaggatgaactaca 494
Query: 501 gtatttcacccttgcccttgacctctactccaagtataacgttacggaaatgctgtcaag 560
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 495 gtatttcaccattgcccttgacctctacttcaagtataacgttacggaaatgctgtcaag 554
Query: 561 tggagggatacaggtttca 579
|||||| ||||| ||||||
Sbjct: 555 tggaggaatacaagtttca 573
>gb|BE595388.1|BE595388 PI1_53_F06.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 499
Score = 753 bits (380), Expect = 0.0
Identities = 449/472 (95%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 28 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 87
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 88 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 147
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 148 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 207
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagccgctcca 260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 208 ctgcgcctccacccgccactgctgcgccagcaacggctgctgccgctcggagccgctcca 267
Query: 261 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 327
Query: 321 ccgccgcacccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagta 380
||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||
Sbjct: 328 ccgccgcacccaattcgagctggacaagatattgccactgatggaggtgcttaataagta 387
Query: 381 ctggccgtccctctactgctccaaatctggaacatgcttcagcggcaagggactcttctg 440
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 388 ctggccgtccctctactgctccaaatctggaacttgcttcagcggcaagggactcttctg 447
Query: 441 ggctcacgagtgggagaaacatggaacctgctctgcccctgtggttcaggat 492
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 448 ggctcacgagtgggagaagcatggaacctgctctgcccctgtggttcaggat 499
>gb|BM317485.1|BM317485 LG1_332_C01.b9_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 450
Score = 731 bits (369), Expect = 0.0
Identities = 429/449 (95%)
Strand = Plus / Plus
Query: 47 tgacgatggcgacgaaggcggcgtgcgtgctggcggtgtgggtgctcgtcgcctcgggcc 106
|||||| ||||| |||||| |||||||||||||||| |||||||||||||||| ||| |
Sbjct: 1 tgacgacggcgaggaaggcagcgtgcgtgctggcggcgtgggtgctcgtcgccgcggctc 60
Query: 107 tgtgcgacctgggctcagcgcgcgcgcccctgggcagcaagccgcagcgggagttcgact 166
||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtccgacctgggctccgcccgcgcacccctgggcagcaagccgcagcgggagttcgact 120
Query: 167 acttcgcgctctccctccagtggcccggcaccatctgcgcctccacccgccactgctgcg 226
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acttcgcgctctccctgcagtggcccggcaccatctgcgcctccacccgccactgctgcg 180
Query: 227 ccaccaacggctgctgccgctcggagccgctccagacgttcacgatccacgggctatggc 286
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccagcaacggctgctgccgctcggagccgctccagacgttcacgatccacgggctatggc 240
Query: 287 cggactacgacgacgggacctggccgtcgtgctgccgccgcacccaattcgagatggaca 346
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 cggactacgacgacgggacctggccgtcgtgctgccgccgcacccaattcgagctggaca 300
Query: 347 agatattgccactgaaggaggtgcttgacaagtactggccgtccctctactgctccaaat 406
||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 301 agatattgccactgatggaggtgcttaataagtactggccgtccctctactgctccaaat 360
Query: 407 ctggaacatgcttcagcggcaagggactcttctgggctcacgagtgggagaaacatggaa 466
||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 361 ctggaacttgcttcagcggtaagggactcttctgggctcacgagtgggagaagcatggaa 420
Query: 467 cctgctctgcccctgtggttcaggatgaa 495
|||||||||||||||||||||||||||||
Sbjct: 421 cctgctctgcccctgtggttcaggatgaa 449
>gb|CN125135.1|CN125135 RHOH1_9_C12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_9_C12_A002 3', mRNA sequence
Length = 717
Score = 688 bits (347), Expect = 0.0
Identities = 413/435 (94%)
Strand = Plus / Plus
Query: 448 gagtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattacagtatttc 507
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 gagtgggagaagcatggaacctgctctgcccctgtggttcaggatgaactacagtatttc 60
Query: 508 acccttgcccttgacctctactccaagtataacgttacggaaatgctgtcaagtggaggg 567
||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 61 accattgcccttgacctctacttcaagtataacgttacagaaatgctgtcaagtggagga 120
Query: 568 atacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccatcaaacat 627
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atacaagtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccatcaaacat 180
Query: 628 gcttttgggggatcaccacaaattgtttgcaagaggggttcaatcgaagaacttaggtta 687
|||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||
Sbjct: 181 gcttttgggggatcaccacaaattgtttgcaagaatggttcagtccaagaacttaggtta 240
Query: 688 tgcttcgacaaagaattgaagcctcgtgattgccttaccacttctttggcgaatggaagt 747
|||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 241 tgcttcgacaaagaattgaagcctcgtgattgtcttactacttctttgacgaatggaagt 300
Query: 748 gtatcaaaaagcaagcactgcccgcggtacatcaccttgccaacgtatgatccccttgtg 807
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 301 gtatcaaaaagcaagcactgcccacggtacatcaccttgccaacatatgatccccttgtg 360
Query: 808 cttgccaattcaactgtagagatcatgacacagttcgatgaatttgaggtgcctgcagct 867
|||||||||||||||||||| |||||| ||||||||||||||| || ||||||| | |||
Sbjct: 361 cttgccaattcaactgtagaaatcatgtcacagttcgatgaatctgtggtgcctactgct 420
Query: 868 ctttatacagcctaa 882
|||||||||||||||
Sbjct: 421 ctttatacagcctaa 435
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 527 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 586
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 587 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 645
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 646 gctttatgtaaccttgaaggttggatattg 675
>gb|CF482072.1|CF482072 POL1_76_H08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_76_H08_A002 3', mRNA sequence
Length = 614
Score = 650 bits (328), Expect = 0.0
Identities = 388/408 (95%)
Strand = Plus / Plus
Query: 475 gcccctgtggttcaggatgaattacagtatttcacccttgcccttgacctctactccaag 534
||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||
Sbjct: 1 gcccctgtggttcaggatgaactacagtatttcaccattgcccttgacctctacttcaag 60
Query: 535 tataacgttacggaaatgctgtcaagtggagggatacaggtttcaaatggtaaggaatat 594
||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 61 tataacgttacagaaatgctgtcaagtggaggaatacaagtttcaaatggtaaggaatat 120
Query: 595 gcactgagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaattgtt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcactgagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaattgtt 180
Query: 655 tgcaagaggggttcaatcgaagaacttaggttatgcttcgacaaagaattgaagcctcgt 714
||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcaagaatggttcagtccaagaacttaggttatgcttcgacaaagaattgaagcctcgt 240
Query: 715 gattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcactgcccgcgg 774
||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 241 gattgtcttactacttctttgacgaatggaagtgtatcaaaaagcaagcactgcccacgg 300
Query: 775 tacatcaccttgccaacgtatgatccccttgtgcttgccaattcaactgtagagatcatg 834
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 301 tacatcaccttgccaacatatgatccccttgtgcttgccaattcaactgtagaaatcatg 360
Query: 835 acacagttcgatgaatttgaggtgcctgcagctctttatacagcctaa 882
|||||||||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 361 tcacagttcgatgaatttgtggtgcctactgctctttatacagcctaa 408
Score = 91.7 bits (46), Expect = 1e-016
Identities = 80/90 (88%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 500 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 559
Query: 957 atcatttgtacatgtacacttgaaagagaa 986
| |||||||||||| |||||||||||||||
Sbjct: 560 accatttgtacatgcacacttgaaagagaa 589
>gb|CN135314.1|CN135314 OX1_32_A10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_32_A10_A002 3', mRNA sequence
Length = 684
Score = 634 bits (320), Expect = e-180
Identities = 380/400 (95%)
Strand = Plus / Plus
Query: 483 ggttcaggatgaattacagtatttcacccttgcccttgacctctactccaagtataacgt 542
||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1 ggttcaggatgaactacagtatttcaccattgcccttgacctctacttcaagtataacgt 60
Query: 543 tacggaaatgctgtcaagtggagggatacaggtttcaaatggtaaggaatatgcactgag 602
||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 61 tacagaaatgctgtcaagtggaggaatacaagtttcaaatggtaaggaatatgcactgag 120
Query: 603 cgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaattgtttgcaagag 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaattgtttgcaagaa 180
Query: 663 gggttcaatcgaagaacttaggttatgcttcgacaaagaattgaagcctcgtgattgcct 722
|||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 tggttcagtccaagaacttaggttatgcttcgacaaagaattgaagcctcgtgattgtct 240
Query: 723 taccacttctttggcgaatggaagtgtatcaaaaagcaagcactgcccgcggtacatcac 782
||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 tactacttctttgacgaatggaagtgtatcaaaaagcaagcactgcccacggtacatcac 300
Query: 783 cttgccaacgtatgatccccttgtgcttgccaattcaactgtagagatcatgacacagtt 842
||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 301 cttgccaacatatgatccccttgtgcttgccaattcaactgtagaaatcatgtcacagtt 360
Query: 843 cgatgaatttgaggtgcctgcagctctttatacagcctaa 882
||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 361 cgatgaatttgtggtgcctactgctctttatacagcctaa 400
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 492 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 551
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 552 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 610
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 611 gctttatgtaaccttgaaggttggatattg 640
>gb|BF656972.1|BF656972 OV2_19_D05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 420
Score = 617 bits (311), Expect = e-174
Identities = 377/399 (94%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 22 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 81
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 82 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 141
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 142 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 201
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagccgctcca 260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 202 ctgcgcctccacccgccactgctgcgccagcaacggctgctgccgctcggagccgctcca 261
Query: 261 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gacgttcacgatccacgggctatggccggactacgacgacgggacctggccgtcgtgctg 321
Query: 321 ccgccgcacccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagta 380
||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||
Sbjct: 322 ccgccgcacccaattcgagctggacaagatattgccactgatggaggtgcttaataagta 381
Query: 381 ctggccgtccctctactgctccaaatctggaacatgctt 419
||||||||||||||||||||||||||||||||| |||||
Sbjct: 382 ctggccgtccctctactgctccaaatctggaacttgctt 420
>gb|BG102108.1|BG102108 RHIZ2_24_H10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 660
Score = 567 bits (286), Expect = e-160
Identities = 342/361 (94%)
Strand = Plus / Plus
Query: 531 caagtataacgttacggaaatgctgtcaagtggagggatacaggtttcaaatggtaagga 590
|||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 2 caagtataacgttacgnaaatgctgtcaagtggaggaatacaagtttcaaatggtaagga 61
Query: 591 atatgcactgagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaat 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atatgcactgagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaat 121
Query: 651 tgtttgcaagaggggttcaatcgaagaacttaggttatgcttcgacaaagaattgaagcc 710
||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgtttgcaagaatggttcagtccaagaacttaggttatgcttcgacaaagaattgaagcc 181
Query: 711 tcgtgattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcactgccc 770
||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 182 tcgtgattgtcttactacttctttgacgaatggaagtgtatcaaaaagcaagcactgccc 241
Query: 771 gcggtacatcaccttgccaacgtatgatccccttgtgcttgccaattcaactgtagagat 830
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 242 acggtacatcaccttgccaacatatgatccccttgtgcttgccaattcaactgtagaaat 301
Query: 831 catgacacagttcgatgaatttgaggtgcctgcagctctttatacagcctaaaatgcaat 890
|||| |||||||||||||||||| ||||||| | |||||||||||||||||| ||||||
Sbjct: 302 catgtcacagttcgatgaatttgtggtgcctactgctctttatacagcctaaggtgcaat 361
Query: 891 t 891
|
Sbjct: 362 t 362
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttat-cctgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| | ||||| |||||||
Sbjct: 445 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 504
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||| ||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 505 accatttgtagatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 563
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||||||||||||
Sbjct: 564 gctttatgtaaccttgaaggtcggatattg 593
>gb|CF756997.1|CF756997 DSAF1_12_D02.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_12_D02_A011 3', mRNA sequence
Length = 569
Score = 563 bits (284), Expect = e-158
Identities = 335/352 (95%)
Strand = Plus / Plus
Query: 531 caagtataacgttacggaaatgctgtcaagtggagggatacaggtttcaaatggtaagga 590
||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 3 caagtataacgttacagaaatgctgtcaagtggaggaatacaagtttcaaatggtaagga 62
Query: 591 atatgcactgagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaat 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atatgcactgagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaat 122
Query: 651 tgtttgcaagaggggttcaatcgaagaacttaggttatgcttcgacaaagaattgaagcc 710
||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgtttgcaagaatggttcagtccaagaacttaggttatgcttcgacaaagaattgaagcc 182
Query: 711 tcgtgattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcactgccc 770
||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 183 tcgtgattgtcttactacttctttgacgaatggaagtgtatcaaaaagcaagcactgccc 242
Query: 771 gcggtacatcaccttgccaacgtatgatccccttgtgcttgccaattcaactgtagagat 830
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 243 acggtacatcaccttgccaacatatgatccccttgtgcttgccaattcaactgtagaaat 302
Query: 831 catgacacagttcgatgaatttgaggtgcctgcagctctttatacagcctaa 882
|||| |||||||||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 303 catgtcacagttcgatgaatttgtggtgcctactgctctttatacagcctaa 354
Score = 97.6 bits (49), Expect = 2e-018
Identities = 108/125 (86%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 446 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 505
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 506 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 564
Query: 1017 gcttt 1021
|||||
Sbjct: 565 gcttt 569
>gb|CX613622.1|CX613622 GABR1_9_F05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_F05_A002 3', mRNA sequence
Length = 661
Score = 555 bits (280), Expect = e-156
Identities = 334/352 (94%)
Strand = Plus / Plus
Query: 531 caagtataacgttacggaaatgctgtcaagtggagggatacaggtttcaaatggtaagga 590
||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 4 caagtataacgttacagaaatgctgtcaagtggaggaatacaagtttcaaatggtaagga 63
Query: 591 atatgcactgagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaat 650
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atatgcattgagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaat 123
Query: 651 tgtttgcaagaggggttcaatcgaagaacttaggttatgcttcgacaaagaattgaagcc 710
||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 124 tgtttgcaagaatggttcagtccaagaacttaggttatgcttcgacaaagaattgaagcc 183
Query: 711 tcgtgattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcactgccc 770
||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 184 tcgtgattgtcttactacttctttgacgaatggaagtgtatcaaaaagcaagcactgccc 243
Query: 771 gcggtacatcaccttgccaacgtatgatccccttgtgcttgccaattcaactgtagagat 830
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 244 acggtacatcaccttgccaacatatgatccccttgtgcttgccaattcaactgtagaaat 303
Query: 831 catgacacagttcgatgaatttgaggtgcctgcagctctttatacagcctaa 882
|||| |||||||||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 304 catgtcacagttcgatgaatttgtggtgcctactgctctttatacagcctaa 355
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 447 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 506
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 507 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 565
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 566 gctttatgtaaccttgaaggttggatattg 595
>gb|AW286395.1|AW286395 LG1_332_C01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 562
Score = 545 bits (275), Expect = e-153
Identities = 326/343 (95%)
Strand = Plus / Plus
Query: 540 cgttacggaaatgctgtcaagtggagggatacaggtttcaaatggtaaggaatatgcact 599
|||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 1 cgttacagaaatgctgtcaagtggaggaatacaagtttcaaatggtaaggaatatgcact 60
Query: 600 gagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaattgtttgcaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaattgtttgcaa 120
Query: 660 gaggggttcaatcgaagaacttaggttatgcttcgacaaagaattgaagcctcgtgattg 719
|| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaatggttcagtccaagaacttaggttatgcttcgacaaagaattgaagcctcgtgattg 180
Query: 720 ccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcactgcccgcggtacat 779
||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 tcttactacttctttgacgaatggaagtgtatcaaaaagcaagcactgcccacggtacat 240
Query: 780 caccttgccaacgtatgatccccttgtgcttgccaattcaactgtagagatcatgacaca 839
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 241 caccttgccaacatatgatccccttgtgcttgccaattcaactgtagaaatcatgtcaca 300
Query: 840 gttcgatgaatttgaggtgcctgcagctctttatacagcctaa 882
|||||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 301 gttcgatgaatttgtggtgcctactgctctttatacagcctaa 343
Score = 105 bits (53), Expect = 9e-021
Identities = 112/129 (86%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 435 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 494
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 495 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 553
Query: 1017 gctttatgt 1025
|||||||||
Sbjct: 554 gctttatgt 562
>gb|CN141958.1|CN141958 WOUND1_3_A05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_3_A05_A002 3', mRNA sequence
Length = 633
Score = 541 bits (273), Expect = e-152
Identities = 331/349 (94%), Gaps = 1/349 (0%)
Strand = Plus / Plus
Query: 535 tataacgttacggaaatgctgtcaagtggagggatacaggtttcaaatggtaaggaatat 594
||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 1 tataacgttacagaaatgctgtcaagtggaggaatacaagtttcaaatggtaaggaatat 60
Query: 595 gcactgagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaa-ttgt 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 gcactgagcgatgtcatcgataccatcaaacatgcttttgggggatcaccacaaanttgt 120
Query: 654 ttgcaagaggggttcaatcgaagaacttaggttatgcttcgacaaagaattgaagcctcg 713
|||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgcaagaatggttcagtccaagaacttaggttatgcttcgacaaagaattgaagcctcg 180
Query: 714 tgattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcactgcccgcg 773
|||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 181 tgattgtcttactacttctttgacgaatggaagtgtatcaaaaagcaagcactgcccacg 240
Query: 774 gtacatcaccttgccaacgtatgatccccttgtgcttgccaattcaactgtagagatcat 833
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 241 gtacatcaccttgccaacatatgatccccttgtgcttgccaattcaactgtagaaatcat 300
Query: 834 gacacagttcgatgaatttgaggtgcctgcagctctttatacagcctaa 882
| |||||||||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 301 gtcacagttcgatgaatttgtggtgcctactgctctttatacagcctaa 349
Score = 123 bits (62), Expect = 4e-026
Identities = 130/150 (86%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttat-cctgggatattca 956
||||||||||||||| ||||||||||||||| || || | ||| | ||||| |||||||
Sbjct: 441 atagcagaaggtgcttgcgtgagcacctagatccggggaaattggtccctggaatattca 500
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 501 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 559
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 560 gctttatgtaaccttgaaggttggatattg 589
>gb|CF431798.1|CF431798 NIT1_9_G08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_9_G08_A002 3', mRNA sequence
Length = 606
Score = 507 bits (256), Expect = e-142
Identities = 304/320 (95%)
Strand = Plus / Plus
Query: 563 gagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccatca 622
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggaatacaagtttcaaatggtaaggaatatgcactgagcgatgtcatcgataccatca 60
Query: 623 aacatgcttttgggggatcaccacaaattgtttgcaagaggggttcaatcgaagaactta 682
||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||
Sbjct: 61 aacatgcttttgggggatcaccacaaattgtttgcaagaatggttcagtccaagaactta 120
Query: 683 ggttatgcttcgacaaagaattgaagcctcgtgattgccttaccacttctttggcgaatg 742
||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||
Sbjct: 121 ggttatgcttcgacaaagaattgaagcctcgtgattgtcttactacttctttgacgaatg 180
Query: 743 gaagtgtatcaaaaagcaagcactgcccgcggtacatcaccttgccaacgtatgatcccc 802
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 181 gaagtgtatcaaaaagcaagcactgcccacggtacatcaccttgccaacatatgatcccc 240
Query: 803 ttgtgcttgccaattcaactgtagagatcatgacacagttcgatgaatttgaggtgcctg 862
||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||
Sbjct: 241 ttgtgcttgccaattcaactgtagaaatcatgtcacagttcgatgaatttgtggtgccta 300
Query: 863 cagctctttatacagcctaa 882
| ||||||||||||||||||
Sbjct: 301 ctgctctttatacagcctaa 320
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 412 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 471
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 472 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 530
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 531 gctttatgtaaccttgaaggttggatattg 560
>gb|BE358188.1|BE358188 DG1_26_B12.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 302
Score = 406 bits (205), Expect = e-111
Identities = 262/281 (93%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 22 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 81
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 82 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 141
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 142 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 201
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagccgctcca 260
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 202 ctgcgcctccacccgccactgctgcgccagcaactgctgctgccgctcggagccgctcca 261
Query: 261 gacgttcacgatccacgggctatggccggactacgacgacg 301
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 262 gacgttcacaatccacgggctatggccggactacgacgacg 302
>gb|CF430340.1|CF430340 PH1_27_B02.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_B02_A002 5', mRNA sequence
Length = 300
Score = 373 bits (188), Expect = e-101
Identities = 245/264 (92%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 37 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 96
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 97 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 156
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 157 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 216
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccgctcggagccgctcca 260
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 217 ctgcgcctccacccgccactgctgcgccagcagtggctgctgccgctcggagccgctcca 276
Query: 261 gacgttcacgatccacgggctatg 284
||||||||||||||||||||||||
Sbjct: 277 gacgttcacgatccacgggctatg 300
>gb|BM328679.1|BM328679 PIC1_25_C04.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 560
Score = 361 bits (182), Expect = 9e-098
Identities = 224/238 (94%)
Strand = Plus / Plus
Query: 645 acaaattgtttgcaagaggggttcaatcgaagaacttaggttatgcttcgacaaagaatt 704
||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||
Sbjct: 1 acaaattgtttgcaagaatggttcagtccaagaacttaggttatgcttcgacaaagaatt 60
Query: 705 gaagcctcgtgattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagca 764
||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 gaagcctcgtgattgtcttactacttctttgacgaatggaagtgtatcaaaaagcaagca 120
Query: 765 ctgcccgcggtacatcaccttgccaacgtatgatccccttgtgcttgccaattcaactgt 824
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 ctgcccacggtacatcaccttgccaacatatgatccccttgtgcttgccaattcaactgt 180
Query: 825 agagatcatgacacagttcgatgaatttgaggtgcctgcagctctttatacagcctaa 882
||| |||||| |||||||||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 181 agaaatcatgtcacagttcgatgaatttgtggtgcctactgctctttatacagcctaa 238
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 330 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 389
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 390 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 448
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 449 gctttatgtaaccttgaaggttggatattg 478
>gb|CF426989.1|CF426989 PH1_3_G05.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_3_G05_A002 3', mRNA sequence
Length = 646
Score = 353 bits (178), Expect = 2e-095
Identities = 220/234 (94%)
Strand = Plus / Plus
Query: 649 attgtttgcaagaggggttcaatcgaagaacttaggttatgcttcgacaaagaattgaag 708
||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 1 attgtttgcaagaatggttcagtccaagaacttaggttatgcttcgacaaagaattgaag 60
Query: 709 cctcgtgattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcactgc 768
||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 cctcgtgattgtcttactacttctttgacgaatggaagtgtatcaaaaagcaagcactgc 120
Query: 769 ccgcggtacatcaccttgccaacgtatgatccccttgtgcttgccaattcaactgtagag 828
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 ccacggtacatcaccttgccaacatatgatccccttgtgcttgccaattcaactgtagaa 180
Query: 829 atcatgacacagttcgatgaatttgaggtgcctgcagctctttatacagcctaa 882
|||||| |||||||||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 181 atcatgtcacagttcgatgaatttgtggtgcctactgctctttatacagcctaa 234
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 326 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 385
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 386 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 444
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 445 gctttatgtaaccttgaaggttggatattg 474
Score = 58.0 bits (29), Expect = 2e-006
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1076 tcttgaggtagaattttcaagtagtaataatagagatataagaaa 1120
||||||||||| ||||||||||| ||| ||||||||| |||||||
Sbjct: 595 tcttgaggtaggattttcaagtaataacaatagagatgtaagaaa 639
>gb|CX607493.1|CX607493 ANR1_29_B11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_B11_A002 3', mRNA sequence
Length = 400
Score = 331 bits (167), Expect = 8e-089
Identities = 206/219 (94%)
Strand = Plus / Plus
Query: 664 ggttcaatcgaagaacttaggttatgcttcgacaaagaattgaagcctcgtgattgcctt 723
|||||| || |||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 6 ggttcagtccaagaacttaggttatgcttcgacaaagaatggaagcctcgtgattgtctt 65
Query: 724 accacttctttggcgaatggaagtgtatcaaaaagcaagcactgcccgcggtacatcacc 783
|| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 66 actacttctttgacgaatggaagtgtatcaaaaagcaagcactgcccacggtacatcacc 125
Query: 784 ttgccaacgtatgatccccttgtgcttgccaattcaactgtagagatcatgacacagttc 843
|||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 126 ttgccaacatatgatccccttgtgcttgccaattcaactgtagaaatcatgtcacagttc 185
Query: 844 gatgaatttgaggtgcctgcagctctttatacagcctaa 882
|||||||||| ||||||| | ||||||||||||||||||
Sbjct: 186 gatgaatttgtggtgcctactgctctttatacagcctaa 224
Score = 81.8 bits (41), Expect = 1e-013
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttat-cctgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| | ||||| |||||||
Sbjct: 316 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 375
Query: 957 atcatttgtacatgtacacttgaaa 981
| |||||||||||| ||||||||||
Sbjct: 376 accatttgtacatgcacacttgaaa 400
>gb|CF427874.1|CF427874 PH1_11_E11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_11_E11_A002 3', mRNA sequence
Length = 535
Score = 325 bits (164), Expect = 5e-087
Identities = 205/219 (93%)
Strand = Plus / Plus
Query: 664 ggttcaatcgaagaacttaggttatgcttcgacaaagaattgaagcctcgtgattgcctt 723
|||||| || |||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 9 ggttcagtccaagaacttaggttatgcttcgacaaagaattgaaccctcgtgattgtctt 68
Query: 724 accacttctttggcgaatggaagtgtatcaaaaagcaagcactgcccgcggtacatcacc 783
|| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 69 actacttctttgacgaatggaagtgtatcaaaaagcaagcactgcccacggtacatcacc 128
Query: 784 ttgccaacgtatgatccccttgtgcttgccaattcaactgtagagatcatgacacagttc 843
|||||||| ||||||||||||||||||||||||||| ||||||| |||||| ||||||||
Sbjct: 129 ttgccaacatatgatccccttgtgcttgccaattcanctgtagaaatcatgtcacagttc 188
Query: 844 gatgaatttgaggtgcctgcagctctttatacagcctaa 882
|||||||||| ||||||| | ||||||||||||||||||
Sbjct: 189 gatgaatttgtggtgcctactgctctttatacagcctaa 227
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 319 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 378
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 379 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 437
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 438 gctttatgtaaccttgaaggttggatattg 467
>gb|BE593917.1|BE593917 WS1_104_A01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 488
Score = 319 bits (161), Expect = 3e-085
Identities = 191/201 (95%)
Strand = Plus / Plus
Query: 682 aggttatgcttcgacaaagaattgaagcctcgtgattgccttaccacttctttggcgaat 741
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||
Sbjct: 9 aggttatgcttcgacaaagaattgaagcctcgtgattgtcttactacttctttgacgaat 68
Query: 742 ggaagtgtatcaaaaagcaagcactgcccgcggtacatcaccttgccaacgtatgatccc 801
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 69 ggaagtgtatcaaaaagcaagcactgcccacggtacatcaccttgccaacatatgatccc 128
Query: 802 cttgtgcttgccaattcaactgtagagatcatgacacagttcgatgaatttgaggtgcct 861
|||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||
Sbjct: 129 cttgtgcttgccaattcaactgtagaaatcatgtcacagttcgatgaatttgtggtgcct 188
Query: 862 gcagctctttatacagcctaa 882
| ||||||||||||||||||
Sbjct: 189 actgctctttatacagcctaa 209
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 301 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 360
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 361 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 419
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 420 gctttatgtaaccttgaaggttggatattg 449
>gb|BE594237.1|BE594237 WS1_104_A01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 539
Score = 319 bits (161), Expect = 3e-085
Identities = 191/201 (95%)
Strand = Plus / Plus
Query: 682 aggttatgcttcgacaaagaattgaagcctcgtgattgccttaccacttctttggcgaat 741
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||
Sbjct: 9 aggttatgcttcgacaaagaattgaagcctcgtgattgtcttactacttctttgacgaat 68
Query: 742 ggaagtgtatcaaaaagcaagcactgcccgcggtacatcaccttgccaacgtatgatccc 801
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 69 ggaagtgtatcaaaaagcaagcactgcccacggtacatcaccttgccaacatatgatccc 128
Query: 802 cttgtgcttgccaattcaactgtagagatcatgacacagttcgatgaatttgaggtgcct 861
|||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||
Sbjct: 129 cttgtgcttgccaattcaactgtagaaatcatgtcacagttcgatgaatttgtggtgcct 188
Query: 862 gcagctctttatacagcctaa 882
| ||||||||||||||||||
Sbjct: 189 actgctctttatacagcctaa 209
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 301 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 360
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 361 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 419
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 420 gctttatgtaaccttgaaggttggatattg 449
>gb|CW151502.1|CW151502 104_552_11143975_116_36315_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143975, DNA
sequence
Length = 614
Score = 311 bits (157), Expect = 8e-083
Identities = 208/225 (92%)
Strand = Plus / Plus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 129 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 188
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 189 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 248
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 249 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 308
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccg 245
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 309 ctgcgcctccacccgccactgctgcgccagcaacggctgctgccg 353
Score = 60.0 bits (30), Expect = 5e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 245 gctcggagccgctccagacgttcacgatcc 274
||||||||||||||||||||||||||||||
Sbjct: 553 gctcggagccgctccagacgttcacgatcc 582
>gb|CW151503.1|CW151503 104_552_11143975_148_36316_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143975, DNA
sequence
Length = 614
Score = 311 bits (157), Expect = 8e-083
Identities = 208/225 (92%)
Strand = Plus / Minus
Query: 21 ggaggcagaataggagaggcaggcgatgacgatggcgacgaaggcggcgtgcgtgctggc 80
||||||||| |||| ||| |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 484 ggaggcagaggaggatagggaggcgatgacgacggcgaggaaggcagcgtgcgtgctggc 425
Query: 81 ggtgtgggtgctcgtcgcctcgggcctgtgcgacctgggctcagcgcgcgcgcccctggg 140
|| |||||||||||||||| ||| |||| |||||||||||| || ||||| ||||||||
Sbjct: 424 ggcgtgggtgctcgtcgccgcggctctgtccgacctgggctccgcccgcgcacccctggg 365
Query: 141 cagcaagccgcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccat 200
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 364 cagcaagccgcagcgggagttcgactacttcgcgctctccctgcagtggcccggcaccat 305
Query: 201 ctgcgcctccacccgccactgctgcgccaccaacggctgctgccg 245
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 304 ctgcgcctccacccgccactgctgcgccagcaacggctgctgccg 260
Score = 60.0 bits (30), Expect = 5e-007
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 245 gctcggagccgctccagacgttcacgatcc 274
||||||||||||||||||||||||||||||
Sbjct: 60 gctcggagccgctccagacgttcacgatcc 31
>gb|BE595576.1|BE595576 PI1_53_F06.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 208
Score = 305 bits (154), Expect = 5e-081
Identities = 193/206 (93%)
Strand = Plus / Plus
Query: 654 ttgcaagaggggttcaatcgaagaacttaggttatgcttcgacaaagaattgaagcctcg 713
|||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgcaagaatggttcagtccaagaacttaggttatgcttcgacaaagaattgaagcctcg 60
Query: 714 tgattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcactgcccgcg 773
|||||| ||||| ||||||||| ||||||||||||||||||||||| |||||||||| ||
Sbjct: 61 tgattgtcttactacttctttgacgaatggaagtgtatcaaaaagcgagcactgcccacg 120
Query: 774 gtacatcaccttgccaacgtatgatccccttgtgcttgccaattcaactgtagagatcat 833
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gtacatcaccttgccaacatatgatccccttgtgcttgccaattcaactgtagaaatcat 180
Query: 834 gacacagttcgatgaatttgaggtgc 859
| |||||||||||||||||| |||||
Sbjct: 181 gtcacagttcgatgaatttgtggtgc 206
>gb|CN150542.1|CN150542 WOUND1_69_H01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_69_H01_A002 5', mRNA sequence
Length = 183
Score = 283 bits (143), Expect = 2e-074
Identities = 173/183 (94%)
Strand = Plus / Plus
Query: 429 gggactcttctgggctcacgagtgggagaaacatggaacctgctctgcccctgtggttca 488
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gggactcttctgggctcacgagtgggagaagcatggaacctgctctgcccctgtggttca 60
Query: 489 ggatgaattacagtatttcacccttgcccttgacctctactccaagtataacgttacgga 548
|| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||| ||
Sbjct: 61 gggtgaactacagtatttcaccattgcccttgacctctacgtcaagtataacgttacaga 120
Query: 549 aatgctgtcaagtggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgt 608
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 121 aatgctgtcaagtggaggaatacaactttcaaatggtaaggaatatgcactgagcgatgt 180
Query: 609 cat 611
|||
Sbjct: 181 cat 183
>gb|CF760593.1|CF760593 DSAF1_63_C10.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_63_C10_A011 5', mRNA sequence
Length = 574
Score = 248 bits (125), Expect = 1e-063
Identities = 152/161 (94%)
Strand = Plus / Plus
Query: 646 caaattgtttgcaagaggggttcaatcgaagaacttaggttatgcttcgacaaagaattg 705
|||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 1 caaattgtttgcaagaatggttcagtccaagaacttaggttatgcttcgacaaagaattg 60
Query: 706 aagcctcgtgattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcac 765
|||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 aagcctcgtgattgtcttactacttctttgacgaatggaagtgtatcaaaaagcaagcac 120
Query: 766 tgcccgcggtacatcaccttgccaacgtatgatccccttgt 806
||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 121 tgcccacggtacatcaccttgccaacatatgatccccttgt 161
>gb|BF656674.1|BF656674 OV2_19_D05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 460
Score = 240 bits (121), Expect = 2e-061
Identities = 145/153 (94%)
Strand = Plus / Plus
Query: 730 tctttggcgaatggaagtgtatcaaaaagcaagcactgcccgcggtacatcaccttgcca 789
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 tctttgacgaatggaagtgtatcaaaaagcaagcactgcccacggtacatcaccttgcca 60
Query: 790 acgtatgatccccttgtgcttgccaattcaactgtagagatcatgacacagttcgatgaa 849
|| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 61 acatatgatccccttgtgcttgccaattcaactgtagaaatcatgtcacagttcgatgaa 120
Query: 850 tttgaggtgcctgcagctctttatacagcctaa 882
|||| ||||||| | ||||||||||||||||||
Sbjct: 121 tttgtggtgcctactgctctttatacagcctaa 153
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 245 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 304
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 305 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 363
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 364 gctttatgtaaccttgaaggttggatattg 393
>gb|CD231680.1|CD231680 SS1_23_G05.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_G05_A012 3', mRNA sequence
Length = 452
Score = 204 bits (103), Expect = 1e-050
Identities = 124/131 (94%)
Strand = Plus / Plus
Query: 752 caaaaagcaagcactgcccgcggtacatcaccttgccaacgtatgatccccttgtgcttg 811
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 caaaaagcaagcactgcccacggtacatcaccttgccaacatatgatccccttgtgcttg 60
Query: 812 ccaattcaactgtagagatcatgacacagttcgatgaatttgaggtgcctgcagctcttt 871
|||||||||||||||| |||||| |||||||||||||||||| ||||||| | |||||||
Sbjct: 61 ccaattcaactgtagaaatcatgtcacagttcgatgaatttgtggtgcctactgctcttt 120
Query: 872 atacagcctaa 882
|||||||||||
Sbjct: 121 atacagcctaa 131
Score = 107 bits (54), Expect = 2e-021
Identities = 128/150 (85%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| |||||||| |||||| ||||| | ||| ||| ||| |||||||
Sbjct: 223 atagcagaaggtgcttgcgtgagcccctagatccagggaaattggtccctggaatattca 282
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| |||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 283 accatttgtacatgcccacttgaaagagaattg-tacttttttaacctggaaatttataa 341
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
|||||||||| || ||||||| ||||||||
Sbjct: 342 gctttatgtacccttgaaggttggatattg 371
>gb|CW238422.1|CW238422 104_695_11216721_148_37525_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11216721, DNA
sequence
Length = 680
Score = 172 bits (87), Expect = 5e-041
Identities = 138/155 (89%)
Strand = Plus / Minus
Query: 554 tgtcaagtggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcg 613
||||||||||||| ||| ||||| ||| || || ||||||||||||||||||| ||| |
Sbjct: 262 tgtcaagtggaggaatatgggtttgaaacggcaaagaatatgcactgagcgatggcattg 203
Query: 614 ataccatcaaacatgcttttgggggatcaccacaaattgtttgcaagaggggttcaatcg 673
|||| |||||||||||||||||||||||||||||| | |||||||||||| || |||||
Sbjct: 202 atactatcaaacatgcttttgggggatcaccacaagatatttgcaagagggtttgaatcg 143
Query: 674 aagaacttaggttatgcttcgacaaagaattgaag 708
|||||||| ||||||||||||||||||||| ||||
Sbjct: 142 aagaactttggttatgcttcgacaaagaatagaag 108
Score = 65.9 bits (33), Expect = 8e-009
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 462 tggaacctgctctgcccctgtggttcaggatgaattacagtatttcacccttgcccttga 521
|||||| ||||||| | ||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 525 tggaacttgctctgtacttgtggttcaggatgaattatgatatttcaccattgcccttga 466
Query: 522 cctctactccaagtata 538
|| |||| ||||||||
Sbjct: 465 ccattacttcaagtata 449
>gb|CD430330.1|CD430330 ETH1_18_D11.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_18_D11_A002 3', mRNA sequence
Length = 606
Score = 172 bits (87), Expect = 5e-041
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 554 tgtcaagtggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcg 613
||||||||||||| ||| ||||| ||| || || ||||||||||||||||||| ||| |
Sbjct: 250 tgtcaagtggaggaatatgggtttgaaacggcaaagaatatgcactgagcgatggcattg 309
Query: 614 ataccatcaaacatgcttttgggggatcaccacaaattgtttgcaagaggggttcaatcg 673
|||| |||||||||||||||||||||||||||||| | |||||||||||| || |||||
Sbjct: 310 atactatcaaacatgcttttgggggatcaccacaagatatttgcaagagggtttgaatcg 369
Query: 674 aagaacttaggttatgcttcgacaaagaattgaag 708
|||||||| ||||||||||||||||||||| ||||
Sbjct: 370 aagaactttggttatgcttcgacaaagaatagaag 404
Score = 61.9 bits (31), Expect = 1e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 480 tgtggttcaggatgaattacagtatttcacccttgcccttgacctctactccaagtata 538
||||||||||||||||||| ||||||||| |||||||||||| |||| ||||||||
Sbjct: 5 tgtggttcaggatgaattatgatatttcaccattgcccttgaccattacttcaagtata 63
>gb|CD430374.1|CD430374 ETH1_18_D11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_18_D11_A002 5', mRNA sequence
Length = 762
Score = 172 bits (87), Expect = 5e-041
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 554 tgtcaagtggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcg 613
||||||||||||| ||| ||||| ||| || || ||||||||||||||||||| ||| |
Sbjct: 584 tgtcaagtggaggaatatgggtttgaaacggcaaagaatatgcactgagcgatggcattg 643
Query: 614 ataccatcaaacatgcttttgggggatcaccacaaattgtttgcaagaggggttcaatcg 673
|||| |||||||||||||||||||||||||||||| | |||||||||||| || |||||
Sbjct: 644 atactatcaaacatgcttttgggggatcaccacaagatatttgcaagagggtttgaatcg 703
Query: 674 aagaacttaggttatgcttcgacaaagaattgaag 708
|||||||| ||||||||||||||||||||| ||||
Sbjct: 704 aagaactttggttatgcttcgacaaagaatagaag 738
Score = 61.9 bits (31), Expect = 1e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 480 tgtggttcaggatgaattacagtatttcacccttgcccttgacctctactccaagtata 538
||||||||||||||||||| ||||||||| |||||||||||| |||| ||||||||
Sbjct: 339 tgtggttcaggatgaattatgatatttcaccattgcccttgaccattacttcaagtata 397
>gb|CN129354.1|CN129354 RHOH1_35_A10.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_A10_A002 3', mRNA sequence
Length = 802
Score = 172 bits (87), Expect = 5e-041
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 554 tgtcaagtggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcg 613
||||||||||||| ||| ||||| ||| || || ||||||||||||||||||| ||| |
Sbjct: 350 tgtcaagtggaggaatatgggtttgaaacggcaaagaatatgcactgagcgatggcattg 409
Query: 614 ataccatcaaacatgcttttgggggatcaccacaaattgtttgcaagaggggttcaatcg 673
|||| |||||||||||||||||||||||||||||| | |||||||||||| || |||||
Sbjct: 410 atactatcaaacatgcttttgggggatcaccacaagatatttgcaagagggtttgaatcg 469
Query: 674 aagaacttaggttatgcttcgacaaagaattgaag 708
|||||||| ||||||||||||||||||||| ||||
Sbjct: 470 aagaactttggttatgcttcgacaaagaatagaag 504
Score = 65.9 bits (33), Expect = 8e-009
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 462 tggaacctgctctgcccctgtggttcaggatgaattacagtatttcacccttgcccttga 521
|||||| ||||||| | ||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 87 tggaacttgctctgtacttgtggttcaggatgaattatgatatttcaccattgcccttga 146
Query: 522 cctctactccaagtata 538
|| |||| ||||||||
Sbjct: 147 ccattacttcaagtata 163
>gb|CW235727.1|CW235727 104_691_11215161_148_37401_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215161, DNA
sequence
Length = 743
Score = 170 bits (86), Expect = 2e-040
Identities = 134/150 (89%)
Strand = Plus / Minus
Query: 554 tgtcaagtggagggatacaggtttcaaatggtaaggaatatgcactgagcgatgtcatcg 613
||||||||||||| ||| ||||| ||| || || ||||||||||||||||||| ||| |
Sbjct: 153 tgtcaagtggaggaatatgggtttgaaacggcaaagaatatgcactgagcgatggcattg 94
Query: 614 ataccatcaaacatgcttttgggggatcaccacaaattgtttgcaagaggggttcaatcg 673
|||| |||||||||||||||||||||||||||||| | |||||||||||| || |||||
Sbjct: 93 atactatcaaacatgcttttgggggatcaccacaagatatttgcaagagggtttgaatcg 34
Query: 674 aagaacttaggttatgcttcgacaaagaat 703
|||||||| |||||||||||||||||||||
Sbjct: 33 aagaactttggttatgcttcgacaaagaat 4
Score = 65.9 bits (33), Expect = 8e-009
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 462 tggaacctgctctgcccctgtggttcaggatgaattacagtatttcacccttgcccttga 521
|||||| ||||||| | ||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 416 tggaacttgctctgtacttgtggttcaggatgaattatgatatttcaccattgcccttga 357
Query: 522 cctctactccaagtata 538
|| |||| ||||||||
Sbjct: 356 ccattacttcaagtata 340
>gb|CW145571.1|CW145571 104_538_11138537_116_34978_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138537, DNA
sequence
Length = 628
Score = 157 bits (79), Expect = 3e-036
Identities = 94/99 (94%)
Strand = Plus / Plus
Query: 707 agcctcgtgattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcact 766
||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 229 agcctcgtgattgtcttactacttctttgacgaatggaagtgtatcaaaaagcaagcact 288
Query: 767 gcccgcggtacatcaccttgccaacgtatgatccccttg 805
|||| |||||||||||||||||||| |||||||||||||
Sbjct: 289 gcccacggtacatcaccttgccaacatatgatccccttg 327
Score = 115 bits (58), Expect = 9e-024
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 805 gtgcttgccaattcaactgtagagatcatgacacagttcgatgaatttgaggtgcctgca 864
||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| |
Sbjct: 425 gtgcttgccaattcaactgtagaaatcatgtcacagttcgatgaatttgtggtgcctact 484
Query: 865 gctctttatacagcctaa 882
||||||||||||||||||
Sbjct: 485 gctctttatacagcctaa 502
Score = 46.1 bits (23), Expect = 0.007
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctaga 928
||||||||| ||||| |||||||||||||||
Sbjct: 594 atagcagaaagtgcttgcgtgagcacctaga 624
>gb|CW407710.1|CW407710 fsbb001f101e22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101e22, DNA
sequence
Length = 607
Score = 157 bits (79), Expect = 3e-036
Identities = 94/99 (94%)
Strand = Plus / Plus
Query: 707 agcctcgtgattgccttaccacttctttggcgaatggaagtgtatcaaaaagcaagcact 766
||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 65 agcctcgtgattgtcttactacttctttgacgaatggaagtgtatcaaaaagcaagcact 124
Query: 767 gcccgcggtacatcaccttgccaacgtatgatccccttg 805
|||| |||||||||||||||||||| |||||||||||||
Sbjct: 125 gcccacggtacatcaccttgccaacatatgatccccttg 163
Score = 131 bits (66), Expect = 2e-028
Identities = 131/150 (87%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccaggcacatttatcc-tgggatattca 956
||||||||||||||| ||||||||||||||| ||||| | ||| ||| ||| |||||||
Sbjct: 430 atagcagaaggtgcttgcgtgagcacctagatccagggaaattggtccctggaatattca 489
Query: 957 atcatttgtacatgtacacttgaaagagaactgacatcttttcaacctgaaaatttataa 1016
| |||||||||||| ||||||||||||||| || | |||| |||||| ||||||||||
Sbjct: 490 accatttgtacatgcacacttgaaagagaattg-tacttttttaacctggaaatttataa 548
Query: 1017 gctttatgtaaccgtgaaggtcggatattg 1046
||||||||||||| ||||||| ||||||||
Sbjct: 549 gctttatgtaaccttgaaggttggatattg 578
Score = 115 bits (58), Expect = 9e-024
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 805 gtgcttgccaattcaactgtagagatcatgacacagttcgatgaatttgaggtgcctgca 864
||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| |
Sbjct: 261 gtgcttgccaattcaactgtagaaatcatgtcacagttcgatgaatttgtggtgcctact 320
Query: 865 gctctttatacagcctaa 882
||||||||||||||||||
Sbjct: 321 gctctttatacagcctaa 338
>gb|DR831457.2|DR831457 MT31 Sorghum bicolor greenbug-responsive cDNA library Sorghum
bicolor cDNA 5', mRNA sequence
Length = 267
Score = 157 bits (79), Expect = 3e-036
Identities = 100/107 (93%)
Strand = Plus / Minus
Query: 776 acatcaccttgccaacgtatgatccccttgtgcttgccaattcaactgtagagatcatga 835
|||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 267 acatcaccttgccaacatatgatccccttgtgcttgccaattcaactgtagaaatcatgt 208
Query: 836 cacagttcgatgaatttgaggtgcctgcagctctttatacagcctaa 882
|| ||||||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 207 catagttcgatgaatttgtggtgcctactgctctttatacagcctaa 161
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 898 atagcagaaggtgctcgcgtgagcacctagaaccagg 934
||||||||||||||| ||||||||||||||| |||||
Sbjct: 69 atagcagaaggtgcttgcgtgagcacctagatccagg 33
>gb|CW039948.1|CW039948 104_272_10505786_115_30390 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505786, DNA
sequence
Length = 498
Score = 139 bits (70), Expect = 6e-031
Identities = 73/74 (98%)
Strand = Plus / Minus
Query: 275 acgggctatggccggactacgacgacgggacctggccgtcgtgctgccgccgcacccaat 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 acgggctatggccggactacgacgacgggacctggccgtcgtgctgccgccgcacccaat 172
Query: 335 tcgagatggacaag 348
||||| ||||||||
Sbjct: 171 tcgagctggacaag 158
Score = 60.0 bits (30), Expect = 5e-007
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 245 gctcggagccgctccagacgttcacgatcc 274
||||||||||||||||||||||||||||||
Sbjct: 379 gctcggagccgctccagacgttcacgatcc 350
Score = 44.1 bits (22), Expect = 0.028
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 347 agatattgccactgaaggaggtgctt 372
||||||||||||||| ||||||||||
Sbjct: 29 agatattgccactgatggaggtgctt 4
>gb|CL160944.1|CL160944 104_352_10805364_114_31826_036 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805364, DNA
sequence
Length = 747
Score = 133 bits (67), Expect = 4e-029
Identities = 91/99 (91%)
Strand = Plus / Minus
Query: 349 atattgccactgaaggaggtgcttgacaagtactggccgtccctctactgctccaaatct 408
|||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 187 atattgccactgaatgaggtgcttcacaaatactggccgtccttctactgctccaaatct 128
Query: 409 ggaacatgcttcagcggcaagggactcttctgggctcac 447
||||| ||||||||||| |||||| |||||| |||||||
Sbjct: 127 ggaacttgcttcagcggtaagggaatcttctaggctcac 89
Score = 69.9 bits (35), Expect = 5e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 278 ggctatggccggactacgacgacgggacctggccgtcgtgctgccgccgcacccaattcg 337
|||||||||||||||||||||| | ||||||||| ||||| | ||| |||||||||||
Sbjct: 406 ggctatggccggactacgacgatgagacctggccaccgtgccacagccacacccaattcg 347
Query: 338 agatggacaag 348
| |||||||||
Sbjct: 346 acatggacaag 336
>gb|CW212675.1|CW212675 104_643_11191147_148_37023_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191147, DNA
sequence
Length = 709
Score = 133 bits (67), Expect = 4e-029
Identities = 91/99 (91%)
Strand = Plus / Minus
Query: 349 atattgccactgaaggaggtgcttgacaagtactggccgtccctctactgctccaaatct 408
|||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 601 atattgccactgaatgaggtgcttcacaaatactggccgtccttctactgctccaaatct 542
Query: 409 ggaacatgcttcagcggcaagggactcttctgggctcac 447
||||| ||||||||||| |||||| |||||| |||||||
Sbjct: 541 ggaacttgcttcagcggtaagggaatcttctaggctcac 503
>gb|CW489885.1|CW489885 fsbb001f275b01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f275b01, DNA
sequence
Length = 766
Score = 133 bits (67), Expect = 4e-029
Identities = 91/99 (91%)
Strand = Plus / Minus
Query: 349 atattgccactgaaggaggtgcttgacaagtactggccgtccctctactgctccaaatct 408
|||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 471 atattgccactgaatgaggtgcttcacaaatactggccgtccttctactgctccaaatct 412
Query: 409 ggaacatgcttcagcggcaagggactcttctgggctcac 447
||||| ||||||||||| |||||| |||||| |||||||
Sbjct: 411 ggaacttgcttcagcggtaagggaatcttctaggctcac 373
Score = 69.9 bits (35), Expect = 5e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 278 ggctatggccggactacgacgacgggacctggccgtcgtgctgccgccgcacccaattcg 337
|||||||||||||||||||||| | ||||||||| ||||| | ||| |||||||||||
Sbjct: 690 ggctatggccggactacgacgatgagacctggccaccgtgccacagccacacccaattcg 631
Query: 338 agatggacaag 348
| |||||||||
Sbjct: 630 acatggacaag 620
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 314,822
Number of Sequences: 832831
Number of extensions: 314822
Number of successful extensions: 89061
Number of sequences better than 0.5: 75
Number of HSP's better than 0.5 without gapping: 70
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 88880
Number of HSP's gapped (non-prelim): 159
length of query: 1138
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1118
effective length of database: 474,703,049
effective search space: 530718008782
effective search space used: 530718008782
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)