BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2550113.2.1
(803 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG047671.1|BG047671 OV1_25_B10.b1_A002 Ovary 1 (OV1) Sor... 779 0.0
gb|AW565188.1|AW565188 LG1_328_B08.b1_A002 Light Grown 1 (L... 771 0.0
gb|AW745189.1|AW745189 LG1_387_B08.b1_A002 Light Grown 1 (L... 767 0.0
gb|BG241242.1|BG241242 OV1_39_H08.b1_A002 Ovary 1 (OV1) Sor... 767 0.0
gb|BG047672.1|BG047672 OV1_25_B11.b1_A002 Ovary 1 (OV1) Sor... 765 0.0
gb|BG047625.1|BG047625 OV1_26_B10.b1_A002 Ovary 1 (OV1) Sor... 759 0.0
gb|CD431590.1|CD431590 ETH1_9_E04.g1_A002 Ethylene-treated ... 759 0.0
gb|CX610191.1|CX610191 ANR1_17_E02.b1_A002 Anaerobic roots ... 759 0.0
gb|CX610277.1|CX610277 ANR1_17_E02.g1_A002 Anaerobic roots ... 724 0.0
gb|CX607974.1|CX607974 ANR1_31_H04.g1_A002 Anaerobic roots ... 712 0.0
gb|BE357221.1|BE357221 DG1_147_B08.g1_A002 Dark Grown 1 (DG... 698 0.0
gb|CF073951.1|CF073951 FE1_9_D04.b1_A002 Iron-deficient see... 692 0.0
gb|CX607888.1|CX607888 ANR1_31_H04.b1_A002 Anaerobic roots ... 660 0.0
gb|AW745256.1|AW745256 LG1_387_B08.g1_A002 Light Grown 1 (L... 585 e-165
gb|BE125936.1|BE125936 DG1_59_H04.b1_A002 Dark Grown 1 (DG1... 579 e-163
gb|AI723943.1|AI723943 RHIZ1_36_A12.y1_A001 Rhizome1 (RHIZ1... 507 e-142
gb|AI724087.1|AI724087 RHIZ1_5_B10.y2_A001 Rhizome1 (RHIZ1)... 505 e-141
gb|BE593995.1|BE593995 WS1_104_H08.g1_A002 Water-stressed 1... 505 e-141
gb|BF656880.1|BF656880 OV2_22_B08.g1_A002 Ovary 2 (OV2) Sor... 398 e-109
gb|BF657222.1|BF657222 OV2_22_B08.b1_A002 Ovary 2 (OV2) Sor... 398 e-109
gb|CD213281.1|CD213281 HS1_29_E02.g1_A012 Heat-shocked seed... 398 e-109
gb|CF760826.1|CF760826 DSAF1_67_C05.b1_A011 Drought-stresse... 398 e-109
gb|CF760505.1|CF760505 DSAF1_62_A03.b1_A011 Drought-stresse... 379 e-103
gb|CF761712.1|CF761712 DSAF1_80_A02.g1_A011 Drought-stresse... 361 7e-098
gb|CF487899.1|CF487899 POL1_46_C09.g1_A002 Pollen Sorghum b... 335 4e-090
gb|CF487818.1|CF487818 POL1_46_C09.b1_A002 Pollen Sorghum b... 331 6e-089
gb|BE638162.1|BE638162 WS1_96_B01.g1_A002 Water-stressed 1 ... 323 1e-086
gb|BG049090.1|BG049090 OV1_23_B10.g1_A002 Ovary 1 (OV1) Sor... 323 1e-086
gb|BG464344.1|BG464344 EM1_72_E12.b1_A002 Embryo 1 (EM1) So... 323 1e-086
gb|BG464672.1|BG464672 EM1_72_E12.g1_A002 Embryo 1 (EM1) So... 323 1e-086
gb|CF484626.1|CF484626 POL1_26_B05.g1_A002 Pollen Sorghum b... 319 2e-085
gb|BE593780.1|BE593780 WS1_102_B04.g1_A002 Water-stressed 1... 315 3e-084
gb|CD463717.1|CD463717 ETH1_46_C04.b1_A002 Ethylene-treated... 315 3e-084
gb|CD463769.1|CD463769 ETH1_46_C04.g1_A002 Ethylene-treated... 315 3e-084
gb|BE592634.1|BE592634 WS1_96_B01.b1_A002 Water-stressed 1 ... 291 5e-077
gb|CF760792.1|CF760792 DSAF1_66_G02.b1_A011 Drought-stresse... 291 5e-077
gb|CF761895.1|CF761895 DSAF1_83_B05.b1_A011 Drought-stresse... 291 5e-077
gb|BG049101.1|BG049101 OV1_23_C10.g1_A002 Ovary 1 (OV1) Sor... 280 2e-073
gb|CF484551.1|CF484551 POL1_26_B05.b1_A002 Pollen Sorghum b... 244 1e-062
gb|BE594094.1|BE594094 WS1_102_B04.b1_A002 Water-stressed 1... 242 4e-062
gb|CW329758.1|CW329758 104_826_11480014_116_35998_089 Sorgh... 230 2e-058
gb|CW329759.1|CW329759 104_826_11480014_148_35997_089 Sorgh... 230 2e-058
gb|CW451282.1|CW451282 fsbb001f191e17f0 Sorghum methylation... 230 2e-058
gb|AW286157.1|AW286157 LG1_328_B08.g1_A002 Light Grown 1 (L... 224 1e-056
gb|AW923806.1|AW923806 DG1_59_H04.g1_A002 Dark Grown 1 (DG1... 163 3e-038
gb|DN552544.1|DN552544 pSHR-RT-A-H1_B08_C360 pSHR Sorghum h... 163 3e-038
gb|DN552706.1|DN552706 pSHR-RT-MR-H1_B12_C360 pSHR Sorghum ... 163 3e-038
gb|CW054019.1|CW054019 104_294_10516295_114_30182 Sorghum m... 127 2e-027
gb|AW922577.1|AW922577 DG1_45_F04.g1_A002 Dark Grown 1 (DG1... 119 4e-025
gb|CL158096.1|CL158096 104_346_10803303_116_31376_279 Sorgh... 109 4e-022
gb|CW092969.1|CW092969 104_455_10999487_114_33047_084 Sorgh... 109 4e-022
gb|CW235145.1|CW235145 104_690_11214826_148_37412_041 Sorgh... 109 4e-022
gb|CW235144.1|CW235144 104_690_11214826_116_37408_041 Sorgh... 103 2e-020
gb|CW462610.1|CW462610 fsbb001f210n11k0 Sorghum methylation... 103 2e-020
gb|CL158095.1|CL158095 104_346_10803303_114_31375_279 Sorgh... 96 6e-018
gb|CL177611.1|CL177611 104_385_10893953_116_31914_017 Sorgh... 74 2e-011
gb|CW196828.1|CW196828 104_621_11181370_148_36819_047 Sorgh... 74 2e-011
gb|CW385171.1|CW385171 fsbb001f068i20f0 Sorghum methylation... 74 2e-011
gb|BZ627714.1|BZ627714 ih54e06.g1 WGS-SbicolorF (DH5a methy... 68 1e-009
gb|BG047673.1|BG047673 OV1_25_B12.b1_A002 Ovary 1 (OV1) Sor... 64 2e-008
gb|AW565676.1|AW565676 LG1_348_G11.g1_A002 Light Grown 1 (L... 48 0.001
gb|AW671580.1|AW671580 LG1_348_G11.b1_A002 Light Grown 1 (L... 48 0.001
gb|CW500685.1|CW500685 fsbb001f296b22f0 Sorghum methylation... 40 0.31
gb|CW500686.1|CW500686 fsbb001f296b22k0 Sorghum methylation... 40 0.31
>gb|BG047671.1|BG047671 OV1_25_B10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 631
Score = 779 bits (393), Expect = 0.0
Identities = 563/614 (91%), Gaps = 18/614 (2%)
Strand = Plus / Minus
Query: 128 aagtgaacaaaagcaataggggg-tcatatgtcatctcataatcttagagatctc----g 182
|||||||||||||||| | |||| |||||||||||||||||||||| || | | | |
Sbjct: 631 aagtgaacaaaagcaacatggggatcatatgtcatctcataatctttgacaccacaatgg 572
Query: 183 tagacagatttcaaggtgccctagaaaccagttgtccgctcaaga--tacaagaacaata 240
||||||||||||||||| |||||||||| ||||||| |||||||| ||| ||||||
Sbjct: 571 tagacagatttcaaggtaccctagaaac-agttgtcggctcaagacatactagaaca--- 516
Query: 241 gaacagctagaagagactaagccattgataataactgtcgacaaaaatgtcttcccttgc 300
|||||||||||||||| ||||||| || || ||||||||||| ||||||||||
Sbjct: 515 ---cagctagaagagactacttcattgatcatcaccatcgacaaaaatatcttcccttgt 459
Query: 301 tg-cagaagagtggctcacttctgtttcagagttacttttttgaggaagtcttgtctttg 359
| ||||||||||| |||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 458 ttacagaagagtggttcacttctgtttcagagttacttt---gaggaagttttgtctttg 402
Query: 360 gtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacgg 342
Query: 420 atgatcctttctctaactgcagttccagatagtactcccccatagggacggttcacagtt 479
||||||||||||||||||||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 341 atgatcctttctctaactgcagttccagagagcactccaccatatgggcggttcacagtt 282
Query: 480 ctgcggttcctagacaacctggaccttttgtactcagctggcctcagatggggaatgccc 539
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 281 ctgcggttcctagacaacctggaccttttgtactcagcaggcctaagatggggaatcccc 222
Query: 540 tggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtactgg 599
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 221 tggatcttcttcccggtcacggggcacttgggcccgctggctctcttcttggtgtactgg 162
Query: 600 tacacgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtggcatag 659
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 161 tacacgagcttaccaccaggggtcttgacgacccgcgtctggttggactttgtggcatag 102
Query: 660 ctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgccg 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 101 ctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgcag 42
Query: 720 gtggataaacccta 733
||||||||||||||
Sbjct: 41 gtggataaacccta 28
>gb|AW565188.1|AW565188 LG1_328_B08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 593
Score = 771 bits (389), Expect = 0.0
Identities = 546/594 (91%), Gaps = 17/594 (2%)
Strand = Plus / Minus
Query: 146 gggggtcatatgtcatctcataatcttagagatctc----gtagacagatttcaaggtgc 201
|||| |||||||||||||||||||||| || | | | |||||||||||||||||| |
Sbjct: 589 ggggatcatatgtcatctcataatctttgacaccacaatggtagacagatttcaaggtac 530
Query: 202 cctagaaaccagttgtccgctcaaga--tacaagaacaatagaacagctagaagagacta 259
||||||||| ||||||| |||||||| ||| |||||| ||||||||||||||||
Sbjct: 529 cctagaaac-agttgtcggctcaagacatactagaaca------cagctagaagagacta 477
Query: 260 agccattgataataactgtcgacaaaaatgtcttcccttgctg-cagaagagtggctcac 318
||||||| || || ||||||||||| |||||||||| | ||||||||||| ||||
Sbjct: 476 cttcattgatcatcaccatcgacaaaaatatcttcccttgtttacagaagagtggttcac 417
Query: 319 ttctgtttcagagttacttttttgaggaagtcttgtctttggtcttctgtaatttcaaca 378
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 416 ttctgtttcagagttacttt---gaggaagttttgtctttggtcttctgtaatttcaaca 360
Query: 379 ccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactg 300
Query: 439 cagttccagatagtactcccccatagggacggttcacagttctgcggttcctagacaacc 498
|||||||||| || ||||| ||||| || |||||||||||||||||||||||||||||||
Sbjct: 299 cagttccagagagcactccaccatatgggcggttcacagttctgcggttcctagacaacc 240
Query: 499 tggaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtca 558
||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 239 tggaccttttgtactcagcaggcctaagatggggaatcccctggatcttcttcccggtca 180
Query: 559 cgggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccag 618
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 179 cggggcacttgggcccgctggctctcttcttggtgtactggtacacgagcttaccaccag 120
Query: 619 gggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtagg 678
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 119 gggtcttgacgacccgcgtctggttggactttgtggcatagctgtgccgcttgcggtagg 60
Query: 679 tcagacgctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaaccct 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tcagacgctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaaccct 6
>gb|AW745189.1|AW745189 LG1_387_B08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 767 bits (387), Expect = 0.0
Identities = 516/555 (92%), Gaps = 13/555 (2%)
Strand = Plus / Minus
Query: 182 gtagacagatttcaaggtgccctagaaaccagttgtccgctcaaga--tacaagaacaat 239
|||||||||||||||||| |||||||||| ||||||| |||||||| ||| ||||||
Sbjct: 574 gtagacagatttcaaggtaccctagaaac-agttgtcggctcaagacatactagaaca-- 518
Query: 240 agaacagctagaagagactaagccattgataataactgtcgacaaaaatgtcttcccttg 299
|||||||||||||||| ||||||| || || ||||||||||| ||||||||||
Sbjct: 517 ----cagctagaagagactacttcattgatcatcaccatcgacaaaaatatcttcccttg 462
Query: 300 ctg-cagaagagtggctcacttctgtttcagagttacttttttgaggaagtcttgtcttt 358
| ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 461 tttacagaagagtggttcacttctgtttcagagttacttt---gaggaagttttgtcttt 405
Query: 359 ggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacg 345
Query: 419 gatgatcctttctctaactgcagttccagatagtactcccccatagggacggttcacagt 478
|||||||||||||||||||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 344 gatgatcctttctctaactgcagttccagagagcactccaccatatgggcggttcacagt 285
Query: 479 tctgcggttcctagacaacctggaccttttgtactcagctggcctcagatggggaatgcc 538
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 284 tctgcggttcctagacaacctggaccttttgtactcagcaggcctaagatggggaatccc 225
Query: 539 ctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtactg 598
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 224 ctggatcttcttcccggtcacggggcacttgggcccgctggctctcttcttggtgtactg 165
Query: 599 gtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtggcata 658
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 164 gtacacgagcttaccaccaggggtcttgacgacccgcgtctggttggactttgtggcata 105
Query: 659 gctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgcc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 gctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgcc 45
Query: 719 ggtggataaacccta 733
|||||||||||||||
Sbjct: 44 ggtggataaacccta 30
>gb|BG241242.1|BG241242 OV1_39_H08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 571
Score = 767 bits (387), Expect = 0.0
Identities = 516/555 (92%), Gaps = 13/555 (2%)
Strand = Plus / Minus
Query: 182 gtagacagatttcaaggtgccctagaaaccagttgtccgctcaaga--tacaagaacaat 239
|||||||||||||||||| |||||||||| ||||||| |||||||| ||| ||||||
Sbjct: 570 gtagacagatttcaaggtaccctagaaac-agttgtcggctcaagacatactagaaca-- 514
Query: 240 agaacagctagaagagactaagccattgataataactgtcgacaaaaatgtcttcccttg 299
|||||||||||||||| ||||||| || || ||||||||||| ||||||||||
Sbjct: 513 ----cagctagaagagactacttcattgatcatcaccatcgacaaaaatatcttcccttg 458
Query: 300 ctg-cagaagagtggctcacttctgtttcagagttacttttttgaggaagtcttgtcttt 358
| ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 457 tttacagaagagtggttcacttctgtttcagagttacttt---gaggaagttttgtcttt 401
Query: 359 ggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacg 341
Query: 419 gatgatcctttctctaactgcagttccagatagtactcccccatagggacggttcacagt 478
|||||||||||||||||||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 340 gatgatcctttctctaactgcagttccagagagcactccaccatatgggcggttcacagt 281
Query: 479 tctgcggttcctagacaacctggaccttttgtactcagctggcctcagatggggaatgcc 538
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 280 tctgcggttcctagacaacctggaccttttgtactcagcaggcctaagatggggaatccc 221
Query: 539 ctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtactg 598
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 220 ctggatcttcttcccggtcacggggcacttgggcccgctggctctcttcttggtgtactg 161
Query: 599 gtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtggcata 658
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 160 gtacacgagcttaccaccaggggtcttgacgacccgcgtctggttggactttgtggcata 101
Query: 659 gctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgcc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgcc 41
Query: 719 ggtggataaacccta 733
|||||||||||||||
Sbjct: 40 ggtggataaacccta 26
>gb|BG047672.1|BG047672 OV1_25_B11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 618
Score = 765 bits (386), Expect = 0.0
Identities = 546/595 (91%), Gaps = 17/595 (2%)
Strand = Plus / Minus
Query: 146 gggggtcatatgtcatctcataatcttagagatctc----gtagacagatttcaaggtgc 201
|||| |||||||||||||||||||||| || | | | |||||||||||||||||| |
Sbjct: 612 ggggatcatatgtcatctcataatctttgacaccacaatggtagacagatttcaaggtac 553
Query: 202 cctagaaaccagttgtccgctcaaga--tacaagaacaatagaacagctagaagagacta 259
||||||||| ||||||| |||||||| ||| |||||| ||||||||||||||||
Sbjct: 552 cctagaaac-agttgtcggctcaagacatactagaaca------cagctagaagagacta 500
Query: 260 agccattgataataactgtcgacaaaaatgtcttcccttgctg-cagaagagtggctcac 318
||||||| || || ||||||||||| |||||||||| | ||||||||||| ||||
Sbjct: 499 cttcattgatcatcaccatcgacaaaaatatcttcccttgtttacagaagagtggttcac 440
Query: 319 ttctgtttcagagttacttttttgaggaagtcttgtctttggtcttctgtaatttcaaca 378
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 439 ttctgtttcagagttacttt---gaggaagttttgtctttggtcttctgtaatttcaaca 383
Query: 379 ccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactg 323
Query: 439 cagttccagatagtactcccccatagggacggttcacagttctgcggttcctagacaacc 498
|||||||||| || ||||| ||||| || |||||||||||||||||||||||||||||||
Sbjct: 322 cagttccagagagcactccaccatatgggcggttcacagttctgcggttcctagacaacc 263
Query: 499 tggaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtca 558
||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 262 tggaccttttgtactcagcaggcctaagatggggaatcccctggatcttcttcccggtca 203
Query: 559 cgggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccag 618
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 202 cggggcacttgggcccgctggctctcttcttggtgtactggtacacgagcttaccaccag 143
Query: 619 gggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtagg 678
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 142 gggtcttgacgacccgcgtctggttggactttgtggcatagctgtgccgcttgcggtagg 83
Query: 679 tcagacgctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaacccta 733
||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 82 tcagacgctgcaccatcttgccgccgtcgcgcgcgccgcaggtggataaacccta 28
>gb|BG047625.1|BG047625 OV1_26_B10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 759 bits (383), Expect = 0.0
Identities = 515/555 (92%), Gaps = 13/555 (2%)
Strand = Plus / Minus
Query: 182 gtagacagatttcaaggtgccctagaaaccagttgtccgctcaaga--tacaagaacaat 239
|||||||||||||||||| |||||||||| ||||||| |||||||| ||| ||||||
Sbjct: 572 gtagacagatttcaaggtaccctagaaac-agttgtcggctcaagacatactagaaca-- 516
Query: 240 agaacagctagaagagactaagccattgataataactgtcgacaaaaatgtcttcccttg 299
|||||||||||||||| ||||||| || || ||||||||||| ||||||||||
Sbjct: 515 ----cagctagaagagactacttcattgatcatcaccatcgacaaaaatatcttcccttg 460
Query: 300 ctg-cagaagagtggctcacttctgtttcagagttacttttttgaggaagtcttgtcttt 358
| ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 459 tttacagaagagtggttcacttctgtttcagagttacttt---gaggaagttttgtcttt 403
Query: 359 ggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacg 343
Query: 419 gatgatcctttctctaactgcagttccagatagtactcccccatagggacggttcacagt 478
|||||||||||||||||||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 342 gatgatcctttctctaactgcagttccagagagcactccaccatatgggcggttcacagt 283
Query: 479 tctgcggttcctagacaacctggaccttttgtactcagctggcctcagatggggaatgcc 538
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 282 tctgcggttcctagacaacctggaccttttgtactcagcaggcctaagatggggaatccc 223
Query: 539 ctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtactg 598
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 222 ctggatcttcttcccggtcacggggcacttgggcccgctggctctcttcttggtgtactg 163
Query: 599 gtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtggcata 658
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 162 gtacacgagcttaccaccaggggtcttgacgacccgcgtctggttggactttgtggcata 103
Query: 659 gctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgcc 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgca 43
Query: 719 ggtggataaacccta 733
|||||||||||||||
Sbjct: 42 ggtggataaacccta 28
>gb|CD431590.1|CD431590 ETH1_9_E04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_9_E04_A002 5', mRNA sequence
Length = 589
Score = 759 bits (383), Expect = 0.0
Identities = 515/555 (92%), Gaps = 13/555 (2%)
Strand = Plus / Minus
Query: 182 gtagacagatttcaaggtgccctagaaaccagttgtccgctcaaga--tacaagaacaat 239
|||||||||||||||||| |||||||||| ||||||| |||||||| ||| ||||||
Sbjct: 580 gtagacagatttcaaggtaccctagaaac-agttgtcggctcaagacatactagaaca-- 524
Query: 240 agaacagctagaagagactaagccattgataataactgtcgacaaaaatgtcttcccttg 299
|||||||||||||||| ||||||| || || ||||||||||| ||||||||||
Sbjct: 523 ----cagctagaagagactacttcattgatcatcaccatcgacaaaaatatcttcccttg 468
Query: 300 ctg-cagaagagtggctcacttctgtttcagagttacttttttgaggaagtcttgtcttt 358
| ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 467 tttacagaagagtggttcacttctgtttcagagttacttt---gaggaagttttgtcttt 411
Query: 359 ggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacg 351
Query: 419 gatgatcctttctctaactgcagttccagatagtactcccccatagggacggttcacagt 478
|||||||||||||||||||||||||||||| || || || ||||| || |||||||||||
Sbjct: 350 gatgatcctttctctaactgcagttccagagagcaccccaccatatgggcggttcacagt 291
Query: 479 tctgcggttcctagacaacctggaccttttgtactcagctggcctcagatggggaatgcc 538
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 290 tctgcggttcctagacaacctggaccttttgtactcagcaggcctaagatggggaatccc 231
Query: 539 ctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtactg 598
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 230 ctggatcttcttcccggtcacggggcacttgggcccgctggctctcttcttggtgtactg 171
Query: 599 gtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtggcata 658
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 170 gtacacgagcttaccaccaggggtcttgacgacccgcgtctggttggactttgtggcata 111
Query: 659 gctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgcc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgcc 51
Query: 719 ggtggataaacccta 733
|||||||||||||||
Sbjct: 50 ggtggataaacccta 36
>gb|CX610191.1|CX610191 ANR1_17_E02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_E02_A002 3', mRNA sequence
Length = 629
Score = 759 bits (383), Expect = 0.0
Identities = 540/588 (91%), Gaps = 17/588 (2%)
Strand = Plus / Minus
Query: 153 atatgtcatctcataatcttagagatc----tcgtagacagatttcaaggtgccctagaa 208
|||||||||||||||||||| || | | | |||||||||||||||||| ||||||||
Sbjct: 613 atatgtcatctcataatctttgacaccacaatggtagacagatttcaaggtaccctagaa 554
Query: 209 accagttgtccgctcaag--atacaagaacaatagaacagctagaagagactaagccatt 266
| |||||||| ||||||| |||| ||||| ||||||||||||||||| ||||
Sbjct: 553 a-cagttgtcggctcaagacatactagaac------acagctagaagagactacttcatt 501
Query: 267 gataataactgtcgacaaaaatgtcttcccttg-ctgcagaagagtggctcacttctgtt 325
||| || || ||||||||||| |||||||||| | ||||||||||| |||||||||||
Sbjct: 500 gatcatcaccatcgacaaaaatatcttcccttgtttacagaagagtggttcacttctgtt 441
Query: 326 tcagagttacttttttgaggaagtcttgtctttggtcttctgtaatttcaacaccttctt 385
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 tcagagttac---tttgaggaagttttgtctttggtcttctgtaatttcaacaccttctt 384
Query: 386 gacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttcc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttcc 324
Query: 446 agatagtactcccccatagggacggttcacagttctgcggttcctagacaacctggacct 505
||| || ||||| ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agagagcactccaccatatgggcggttcacagttctgcggttcctagacaacctggacct 264
Query: 506 tttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacgggaca 565
|||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||||| ||
Sbjct: 263 tttgtactcagcaggcctaagatggggaatcccctgggtcttcttcccggtcacggggca 204
Query: 566 cttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggggtctt 625
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 203 cttgggcccgctggctctcttcttggtgtactggtacacgagcttaccaccaggggtctt 144
Query: 626 gacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtcagacg 685
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 143 gacgacccgcgtctggttggactttgtggcatagctgtgccgcttgcggtaggtcagacg 84
Query: 686 ctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaacccta 733
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaacccta 36
>gb|CX610277.1|CX610277 ANR1_17_E02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_E02_A002 5', mRNA sequence
Length = 600
Score = 724 bits (365), Expect = 0.0
Identities = 531/582 (91%), Gaps = 17/582 (2%)
Strand = Plus / Minus
Query: 146 gggggtcatatgtcatctcataatcttagagatctc----gtagacagatttcaaggtgc 201
|||| |||||||||||||||||||||| || | | | |||||||||||||||||| |
Sbjct: 572 ggggatcatatgtcatctcataatctttgacaccacaatggtagacagatttcaaggtac 513
Query: 202 cctagaaaccagttgtccgctcaaga--tacaagaacaatagaacagctagaagagacta 259
||||||||| ||||||| |||||||| ||| |||||| ||||||||||||||||
Sbjct: 512 cctagaaac-agttgtcggctcaagacatactagaaca------cagctagaagagacta 460
Query: 260 agccattgataataactgtcgacaaaaatgtcttcccttgctg-cagaagagtggctcac 318
||||||| || || ||||||||||| |||||||||| | ||||||||||| ||||
Sbjct: 459 cttcattgatcatcaccatcgacaaaaatatcttcccttgtttacagaagagtggttcac 400
Query: 319 ttctgtttcagagttacttttttgaggaagtcttgtctttggtcttctgtaatttcaaca 378
|||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||
Sbjct: 399 ttctgtttcagagttactct---gaggaagtttcgtctttggtcttctgtaatttcaaca 343
Query: 379 ccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactg 283
Query: 439 cagttccagatagtactcccccatagggacggttcacagttctgcggttcctagacaacc 498
|||||||||| || ||||| ||||| || |||||||||||||||||||||||||||||||
Sbjct: 282 cagttccagagagcactccaccatatgggcggttcacagttctgcggttcctagacaacc 223
Query: 499 tggaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtca 558
||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||||||||
Sbjct: 222 tggaccttttgtactcagcaggcctaagatggggaatcccctgggtcttcttcccggtca 163
Query: 559 cgggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccag 618
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 162 cggggcacttgggcccgctggctctcttcttggtgtactggtacacgagcttaccaccag 103
Query: 619 gggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtagg 678
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 102 gggtcttgacgacccgcgtctggttggactttgtggcatagctgtgccgcttgcggtagg 43
Query: 679 tcagacgctgcaccatcttgccgccgtcgcgcgcgccgccgg 720
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tcagacgctgcaccatcttgccgccgtcgcgcgcgccgccgg 1
>gb|CX607974.1|CX607974 ANR1_31_H04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_31_H04_A002 5', mRNA sequence
Length = 546
Score = 712 bits (359), Expect = 0.0
Identities = 510/555 (91%), Gaps = 14/555 (2%)
Strand = Plus / Minus
Query: 182 gtagacagatttcaaggtgccctagaaaccagttgtccgctcaaga--tacaagaacaat 239
|||||||| ||||||||| |||||||||| ||| ||| |||||||| ||| ||||||
Sbjct: 545 gtagacagctttcaaggtaccctagaaac-agtcgtcggctcaagacatactagaaca-- 489
Query: 240 agaacagctagaagagactaagccattgataataactgtcgacaaaaatgtcttcccttg 299
|||||||||||||||| ||||||| || || ||||||||||| ||||||||||
Sbjct: 488 ----cagctagaagagactacttcattgatcatcaccatcgacaaaaatatcttcccttg 433
Query: 300 ctg-cagaagagtggctcacttctgtttcagagttacttttttgaggaagtcttgtcttt 358
| | ||||||||| |||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 432 tttaccgaagagtggttcacttctgtttcagagttacttt---gaggaagttttgtcttt 376
Query: 359 ggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacg 316
Query: 419 gatgatcctttctctaactgcagttccagatagtactcccccatagggacggttcacagt 478
|||||||||||||||||||||||||||||| || ||||| ||||| || |||||||||||
Sbjct: 315 gatgatcctttctctaactgcagttccagagagcactccaccatatgggcggttcacagt 256
Query: 479 tctgcggttcctagacaacctggaccttttgtactcagctggcctcagatggggaatgcc 538
| ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| ||
Sbjct: 255 tgtgcggttcctagacaacctggaccttttgtactcagcaggcttaagatggggaatccc 196
Query: 539 ctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtactg 598
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 195 ctggatcttcttcccggtcacggggcacttgggcccgctggctctcttcttggtgtactg 136
Query: 599 gtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtggcata 658
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 135 gtacacgagcttaccaccaggggtcttgacgacccgcgtctggttggactttgtggcata 76
Query: 659 gctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgcc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 gctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgcc 16
Query: 719 ggtggataaacccta 733
|| ||||||||||||
Sbjct: 15 gg-ggataaacccta 2
>gb|BE357221.1|BE357221 DG1_147_B08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 597
Score = 698 bits (352), Expect = 0.0
Identities = 537/593 (90%), Gaps = 18/593 (3%)
Strand = Plus / Minus
Query: 83 caactgatgcccaactcatgtgaactcggactttcagttttagcaaagtgaacaaaagca 142
||||||| ||||||||||| ||||||| |||| |||||||||| |||||||||||||||
Sbjct: 597 caactgaagcccaactcatatgaactcatacttgcagttttagcgaagtgaacaaaagca 538
Query: 143 ataggggg-tcatatgtcatctcataatcttagagatctc----gtagacagatttcaag 197
| | |||| |||||||||||||||||||||| || | | | ||||||||||||||||
Sbjct: 537 acatggggatcatatgtcatctcataatctttgacaccacaatggtagacagatttcaag 478
Query: 198 gtgccctagaaaccagttgtccgctcaaga--tacaagaacaatagaacagctagaagag 255
|| |||||||||| ||||||| |||||||| ||| |||||| ||||||||||||
Sbjct: 477 gtaccctagaaac-agttgtcggctcaagacatactagaaca------cagctagaagag 425
Query: 256 actaagccattgataataactgtcgacaaaaatgtcttcccttgctg-cagaagagtggc 314
|||| ||||||| || || ||||||||||| |||||||||| | |||||||||||
Sbjct: 424 actacttcattgatcatcaccatcgacaaaaatatcttcccttgtttacagaagagtggt 365
Query: 315 tcacttctgtttcagagttacttttttgaggaagtcttgtctttggtcttctgtaatttc 374
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 364 tcacttctgtttcagagttacttt---gaggaagttttgtctttggtcttctgtaatttc 308
Query: 375 aacaccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctcta 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aacaccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctcta 248
Query: 435 actgcagttccagatagtactcccccatagggacggttcacagttctgcggttcctagac 494
|||||||||||||| || ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 247 actgcagttccagagagcactccaccatatgggcggttcacagttctgcggttcctagac 188
Query: 495 aacctggaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccg 554
||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 187 aacctggaccttttgtactcagcaggcctaagatggggaatcccctggatcttcttcccg 128
Query: 555 gtcacgggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgcca 614
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 127 gtcacggggcacttgggcccgctggctctcttcttggtgtactggtacacgagcttacca 68
Query: 615 ccaggggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccg 667
||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 67 ccaggggtcttgacgacccgcgtctggttggactttgtggcatagctgtgccg 15
>gb|CF073951.1|CF073951 FE1_9_D04.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_9_D04_A002 3', mRNA sequence
Length = 568
Score = 692 bits (349), Expect = 0.0
Identities = 525/578 (90%), Gaps = 18/578 (3%)
Strand = Plus / Minus
Query: 104 gaactcggactttcagttttagcaaagtgaacaaaagcaataggggg-tcatatgtcatc 162
|||||| ||||| |||||||||| |||||||||||||||| | |||| ||||||||||||
Sbjct: 568 gaactcagacttgcagttttagcgaagtgaacaaaagcaacatggggatcatatgtcatc 509
Query: 163 tcataatcttagagatctc----gtagacagatttcaaggtgccctagaaaccagttgtc 218
|||||||||| || | | | |||||||||||||||||| |||||||||| |||||||
Sbjct: 508 tcataatctttgacaccacaatggtagacagatttcaaggtaccctagaaac-agttgtc 450
Query: 219 cgctcaaga--tacaagaacaatagaacagctagaagagactaagccattgataataact 276
|||||||| ||| |||||| |||||||||||||||| ||||||| || ||
Sbjct: 449 ggctcaagacatactagaaca------cagctagaagagactacttcattgatcatcacc 396
Query: 277 gtcgacaaaaatgtcttcccttgctg-cagaagagtggctcacttctgtttcagagttac 335
||||||||||| |||||||||| | ||||||||||| |||||||||||||||||||||
Sbjct: 395 atcgacaaaaatatcttcccttgtttacagaagagtggttcacttctgtttcagagttac 336
Query: 336 ttttttgaggaagtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttc 395
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttt---gaggaagttttgtctttggtcttctgtaatttcaacaccttcttgacaatcttc 279
Query: 396 tgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagatagtact 455
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 278 tgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagagagcact 219
Query: 456 cccccatagggacggttcacagttctgcggttcctagacaacctggaccttttgtactca 515
|| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ccaccatatgggcggttcacagttctgcggttcctagacaacctggaccttttgtactca 159
Query: 516 gctggcctcagatggggaatgccctggatcttcttcccggtcacgggacacttgggcccg 575
|| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 158 gcaggcctaagatggggaatcccctggatcttcttcccggtcacggggcacttgggcccg 99
Query: 576 ctggctctcttcttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgc 635
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 98 ctggctctcttcttggtgtactggtacacgagcttaccaccaggggtcttgacgacccgc 39
Query: 636 gtctggttggacttcgtggcatagctgtgccgcttgcg 673
|||||||||||||| |||||||||||||||||||||||
Sbjct: 38 gtctggttggactttgtggcatagctgtgccgcttgcg 1
>gb|CX607888.1|CX607888 ANR1_31_H04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_31_H04_A002 3', mRNA sequence
Length = 587
Score = 660 bits (333), Expect = 0.0
Identities = 518/574 (90%), Gaps = 18/574 (3%)
Strand = Plus / Minus
Query: 62 caacaagcaggaaataaacaccaactgatgcccaactcatgtgaactcggactttcagtt 121
|||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 564 caacaagcaggaaataaataccaactgaagcccaactcatatgaactcagacttgcagtt 505
Query: 122 ttagcaaagtgaacaaaagcaataggggg-tcatatgtcatctcataatcttagagatct 180
||||| |||||||||||||||| | |||| |||||||||||||||||||||| || | |
Sbjct: 504 ttagccaagtgaacaaaagcaacatggggatcatatgtcatctcataatctttgacacca 445
Query: 181 c----gtagacagatttcaaggtgccctagaaaccagttgtccgctcaaga--tacaaga 234
| |||||||||||||||||| |||||||||| ||||||| |||||||| ||| |||
Sbjct: 444 caatggtagacagatttcaaggtaccctagaaac-agttgtcggctcaagacatactaga 386
Query: 235 acaatagaacagctagaagagactaagccattgataataactgtcgacaaaaatgtcttc 294
||| |||||||||||||||| ||||||| || || ||||||||||| |||||
Sbjct: 385 aca------cagctagaagagactacttcattgatcatcaccatcgacaaaaatatcttc 332
Query: 295 ccttgctg-cagaagagtggctcacttctgtttcagagttacttttttgaggaagtcttg 353
||||| | ||||||||||| |||||||||||||||| ||||||| |||||||| |||
Sbjct: 331 ccttgtttacagaagagtggttcacttctgtttcagaattacttt---gaggaagttttg 275
Query: 354 tctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaa 215
Query: 414 gcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacggttc 473
||||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||||
Sbjct: 214 gcacggatgatcctttctctaactgcagttccagagagcactccaccatatgggcggttc 155
Query: 474 acagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatgggga 533
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 154 acagttctgcggttcctagacaacctggaccttttgtactcagcaggcctaagatgggga 95
Query: 534 atgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtg 593
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 94 atcccctggatcttcttcccggtcacggggcacttgggcccgctggctctcttcttggtg 35
Query: 594 tactggtacacgagcttgccaccaggggtcttga 627
||||||||||||||||| ||||||||||||||||
Sbjct: 34 tactggtacacgagcttaccaccaggggtcttga 1
>gb|AW745256.1|AW745256 LG1_387_B08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 549
Score = 585 bits (295), Expect = e-165
Identities = 488/547 (89%), Gaps = 19/547 (3%)
Strand = Plus / Minus
Query: 112 actttcagttttagcaaagtgaacaaaagcaataggggg--tcatatgtcatctcataat 169
|||| |||||||||| |||||||||||||||| | |||| |||||||||||||||||||
Sbjct: 541 acttgcagttttagcgaagtgaacaaaagcaacatgggggatcatatgtcatctcataat 482
Query: 170 cttagagatctc----gtagacagatttcaaggtgccctagaaaccagttgtccgctcaa 225
||| || | | | |||||||||||||||||| ||||| |||| ||||||| ||||||
Sbjct: 481 ctttgacaccacaatggtagacagatttcaaggtaccctaaaaac-agttgtcggctcaa 423
Query: 226 ga--tacaagaacaatagaacagctagaagagactaagccattgataataactgtcgaca 283
|| ||| |||||| ||||||||| |||||| ||||||| || || ||||||
Sbjct: 422 gacatactagaaca------cagctagaaaagactacttcattgatcatcaccatcgaca 369
Query: 284 aaaatgtcttcccttgctg-cagaagagtggctcacttctgtttcagagttacttttttg 342
||||| |||||||||| | || || ||||| |||||||||||||| ||||||||| |
Sbjct: 368 aaaatatcttcccttgtttacaaaaaagtggttcacttctgtttcaaagttacttt---g 312
Query: 343 aggaagtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctctt 402
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aggaagttttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctctt 252
Query: 403 caaccaggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccat 462
|||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 251 caaccaggaaagcacggatgatcctttctctaactgcagttccagaaagcactccaccat 192
Query: 463 agggacggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcc 522
| || |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 191 atgggcggttcacagttctgcggttcctaaacaacctggaccttttgtactcagcaggcc 132
Query: 523 tcagatggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctc 582
| | ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 131 taaaatggggaatcccctggatcttcttcccggtcacggggcacttgggcccgctggctc 72
Query: 583 tcttcttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggt 642
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 71 tcttcttggtgtactggtacacgagcttaccaccaggggtcttgacgacccgcgtctggt 12
Query: 643 tggactt 649
|||||||
Sbjct: 11 tggactt 5
>gb|BE125936.1|BE125936 DG1_59_H04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 343
Score = 579 bits (292), Expect = e-163
Identities = 325/336 (96%)
Strand = Plus / Minus
Query: 396 tgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagatagtact 455
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 343 tgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagagagcact 284
Query: 456 cccccatagggacggttcacagttctgcggttcctagacaacctggaccttttgtactca 515
|| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ccaccatatgggcggttcacagttctgcggttcctagacaacctggaccttttgtactca 224
Query: 516 gctggcctcagatggggaatgccctggatcttcttcccggtcacgggacacttgggcccg 575
|| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 223 gcaggcctaagatggggaatcccctggatcttcttcccggtcacggggcacttgggcccg 164
Query: 576 ctggctctcttcttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgc 635
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 163 ctggctctcttcttggtgtactggtacacgagcttaccaccaggggtcttgacgacccgc 104
Query: 636 gtctggttggacttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatc 695
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gtctggttggactttgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatc 44
Query: 696 ttgccgccgtcgcgcgcgccgccggtggataaaccc 731
||||||||||||||||||||||||||||||||||||
Sbjct: 43 ttgccgccgtcgcgcgcgccgccggtggataaaccc 8
>gb|AI723943.1|AI723943 RHIZ1_36_A12.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 473
Score = 507 bits (256), Expect = e-142
Identities = 423/473 (89%), Gaps = 18/473 (3%)
Strand = Plus / Minus
Query: 91 gcccaactcatgtgaactcggactttcagttttagcaaagtgaacaaaagcaataggggg 150
||||||||||| ||||||| ||||| |||||||||| |||||||||||||||| | ||||
Sbjct: 470 gcccaactcatatgaactcagacttgcagttttagcgaagtgaacaaaagcaacatgggg 411
Query: 151 -tcatatgtcatctcataatcttagagatctc----gtagacagatttcaaggtgcccta 205
|||||||||||||||||||||| || | | | |||||||||||||||||| |||||
Sbjct: 410 atcatatgtcatctcataatctttgacaccacaatggtagacagatttcaaggtacccta 351
Query: 206 gaaaccagttgtccgctcaaga--tacaagaacaatagaacagctagaagagactaagcc 263
||||| ||||||| |||||||| ||| |||||| |||||||||||||||| |
Sbjct: 350 gaaac-agttgtcggctcaagacatactagaaca------cagctagaagagactacttc 298
Query: 264 attgataataactgtcgacaaaaatgtcttcccttgctg-cagaagagtggctcacttct 322
|||||| || || ||||||||||| |||||||||| | ||||||||||| ||||||||
Sbjct: 297 attgatcatcaccatcgacaaaaatatcttcccttgtttacagaagagtggttcacttct 238
Query: 323 gtttcagagttacttttttgaggaagtcttgtctttggtcttctgtaatttcaacacctt 382
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 237 gtttcagagttacttt---gaggaagttttgtctttggtcttctgtaatttcaacacctt 181
Query: 383 cttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactgcagt 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactgcagt 121
Query: 443 tccagatagtactcccccatagggacggttcacagttctgcggttcctagacaacctgga 502
|||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tccagagagcactccaccatatggacggttcacagttctgcggttcctagacaacctgga 61
Query: 503 ccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccgg 555
||||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 60 ccttttgtactcagcaggcctaagatggggaatcccctggatcttcttcccgg 8
>gb|AI724087.1|AI724087 RHIZ1_5_B10.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 476
Score = 505 bits (255), Expect = e-141
Identities = 432/486 (88%), Gaps = 18/486 (3%)
Strand = Plus / Minus
Query: 77 aaacaccaactgatgcccaactcatgtgaactcggactttcagttttagcaaagtgaaca 136
||||||||||||| ||||||||||| ||||||| ||||| |||||||||| |||||||||
Sbjct: 476 aaacaccaactgaagcccaactcatatgaactcagacttgcagttttagcgaagtgaaca 417
Query: 137 aaagcaataggggg-tcatatgtcatctcataatcttagagatctc----gtagacagat 191
||||||| | |||| |||||||||||||||||||||| || | | | ||||||||||
Sbjct: 416 aaagcaacatggggatcatatgtcatctcataatctttgacaccacaatggtagacagat 357
Query: 192 ttcaaggtgccctagaaaccagttgtccgctcaaga--tacaagaacaatagaacagcta 249
|||||||| |||||||||| ||||||| |||||||| ||| |||||| ||||||
Sbjct: 356 ttcaaggtaccctagaaac-agttgtcggctcaagacatactagaaca------cagcta 304
Query: 250 gaagagactaagccattgataataactgtcgacaaaaatgtcttcccttgctg-cagaag 308
|||||||||| ||||||| || || ||||||||||| |||||||||| | ||||||
Sbjct: 303 gaagagactacttcattgatcatcaccatcgacaaaaatatcttcccttgtttacagaag 244
Query: 309 agtggctcacttctgtttcagagttacttttttgaggaagtcttgtctttggtcttctgt 368
||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 243 agtggttcacttctgtttcagagttacttt---gaggaagttttgtctttggtcttctgt 187
Query: 369 aatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctt 127
Query: 429 tctctaactgcagttccagatagtactcccccatagggacggttcacagttctgcggttc 488
||||||||||||||| |||| || ||| | ||||| || |||||||||||||||||||||
Sbjct: 126 tctctaactgcagttncagagagcactncaccatatgggcggttcacagttctgcggttc 67
Query: 489 ctagacaacctggaccttttgtactcagctggcctcagatggggaatgccctggatcttc 548
||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 66 ctagacaacctggaccttttgtactcagcaggcctaagatggggaatcccctggatcttc 7
Query: 549 ttcccg 554
||||||
Sbjct: 6 ttcccg 1
>gb|BE593995.1|BE593995 WS1_104_H08.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 588
Score = 505 bits (255), Expect = e-141
Identities = 426/478 (89%), Gaps = 19/478 (3%)
Strand = Plus / Minus
Query: 122 ttagcaaagtgaacaaaagca--atagggggtcatatgtcatctcataatcttagagatc 179
||||| ||||||||||| || || |||| |||||||||||||||||||||| || | |
Sbjct: 588 ttagcgaagtgaacaaagncaacatgggggatcatatgtcatctcataatctttgacacc 529
Query: 180 ----tcgtagacagatttcaaggtgccctagaaaccagttgtccgctcaag--atacaag 233
| |||||||||||||||||| ||||||||| |||||||| ||||||| |||| ||
Sbjct: 528 acaatggtagacagatttcaaggtaccctagaaa-cagttgtcggctcaagacatactag 470
Query: 234 aacaatagaacagctagaagagactaagccattgataataactgtcgacaaaaatgtctt 293
||| ||||||||||||||||| ||||||| || || ||||||||||| ||||
Sbjct: 469 aac------acagctagaagagactacttcattgatcatcaccatcgacaaaaatatctt 416
Query: 294 cccttg-ctgcagaagagtggctcacttctgtttcagagttacttttttgaggaagtctt 352
|||||| | ||||||||||| ||||||||||||||||||||| ||||||||||| ||
Sbjct: 415 cccttgtttacagaagagtggttcacttctgtttcagagttac---tttgaggaagtttt 359
Query: 353 gtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaa 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaa 299
Query: 413 agcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacggtt 472
|||||||||||||||||||||||||||||||||||| || ||||| ||||| || |||||
Sbjct: 298 agcacggatgatcctttctctaactgcagttccagagagcactccaccatatgggcggtt 239
Query: 473 cacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatgggg 532
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 238 cacagttctgcggttcctagacaacctggaccttttgtactcagcaggcctaagatgggg 179
Query: 533 aatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttg 590
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 178 aatcccctggatcttcttcccggtcacggggcacttgggcccgctggctctcttcttg 121
>gb|BF656880.1|BF656880 OV2_22_B08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 571
Score = 398 bits (201), Expect = e-109
Identities = 318/357 (89%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||| ||||||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 385 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgttcctcaacc 326
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||| || || ||||| ||| ||||||| |||||||| ||||| |||
Sbjct: 325 aagaaagcacggatgattctctccctaacagcaattccagagagtactccaccatatgga 266
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 265 cggttcacagtcctgcggttcctagacaacctggaccttttgtactcagcaggccttaag 206
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
||||| || |||||||||||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 205 tgggggatcccctggatcttcttcccggtgacggggcacttgggcccgctcgccctcttc 146
Query: 588 ttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggac 647
|| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 145 ttcgtgtactggtacacaagcttcccaccaggggtcttgacgacccgggtctggttggac 86
Query: 648 ttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
|| || || |||||||| ||||| |||||||| || ||||||||||||| |||||||
Sbjct: 85 ttggtcgcgtagctgtgacgcttccggtaggtgaggcgctgcaccatctcgccgccg 29
>gb|BF657222.1|BF657222 OV2_22_B08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 545
Score = 398 bits (201), Expect = e-109
Identities = 318/357 (89%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||| ||||||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 385 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgttcctcaacc 326
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||| || || ||||| ||| ||||||| |||||||| ||||| |||
Sbjct: 325 aagaaagcacggatgattctctccctaacagcaattccagagagtactccaccatatgga 266
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 265 cggttcacagtcctgcggttcctagacaacctggaccttttgtactcagcaggccttaag 206
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
||||| || |||||||||||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 205 tgggggatcccctggatcttcttcccggtgacggggcacttgggcccgctcgccctcttc 146
Query: 588 ttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggac 647
|| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 145 ttcgtgtactggtacacaagcttcccaccaggggtcttgacgacccgggtctggttggac 86
Query: 648 ttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
|| || || |||||||| ||||| |||||||| || ||||||||||||| |||||||
Sbjct: 85 ttggtcgcgtagctgtgacgcttccggtaggtgaggcgctgcaccatctcgccgccg 29
>gb|CD213281.1|CD213281 HS1_29_E02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_29_E02_A012 5', mRNA sequence
Length = 570
Score = 398 bits (201), Expect = e-109
Identities = 318/357 (89%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||||||||||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 401 gtcttgtccttggtcttctgtattttcaggaccttcttgacaatcttctgttcctcaacc 342
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||| || || ||||| ||| ||||||| |||||||| ||||| |||
Sbjct: 341 aagaaagcacggatgattctctccctaacagcaattccagagagtactccgccatatgga 282
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 281 cggttcacagtcctgcggttcctagacaacctggaccttttgtactcagcaggccttaag 222
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
||||| || |||||||||||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 221 tgggggatcccctggatcttcttcccggtgacggggcacttgggcccgctcgccctcttc 162
Query: 588 ttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggac 647
|| |||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 161 ttcgtgtactggtacacaagcttcccacctggggtcttgacgacccgggtctggttggac 102
Query: 648 ttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
|| || || |||||||| ||||| |||||||| || ||||||||||||| |||||||
Sbjct: 101 ttggtcgcgtagctgtgacgcttccggtaggtgaggcgctgcaccatctcgccgccg 45
>gb|CF760826.1|CF760826 DSAF1_67_C05.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_67_C05_A011 5', mRNA sequence
Length = 549
Score = 398 bits (201), Expect = e-109
Identities = 318/357 (89%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||| ||||||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 381 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgttcctcaacc 322
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||| || || ||||| ||| ||||||| |||||||| ||||| |||
Sbjct: 321 aagaaagcacggatgattctctccctaacagcaattccagagagtactccaccatatgga 262
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 261 cggttcacagtcctgcggttcctagacaacctggaccttttgtactcagcaggccttaag 202
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
||||| || |||||||||||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 201 tgggggatcccctggatcttcttcccggtgacggggcacttgggcccgctcgccctcttc 142
Query: 588 ttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggac 647
|| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 141 ttcgtgtactggtacacaagcttcccaccaggggtcttgacgacccgggtctggttggac 82
Query: 648 ttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
|| || || |||||||| ||||| |||||||| || ||||||||||||| |||||||
Sbjct: 81 ttggtcgcgtagctgtgacgcttccggtaggtgaggcgctgcaccatctcgccgccg 25
>gb|CF760505.1|CF760505 DSAF1_62_A03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_62_A03_A011 5', mRNA sequence
Length = 338
Score = 379 bits (191), Expect = e-103
Identities = 293/327 (89%)
Strand = Plus / Minus
Query: 378 accttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaact 437
|||||||||||||||||||| || ||||||| ||||||||||||||| || || |||||
Sbjct: 333 accttcttgacaatcttctgttcctcaaccaagaaagcacggatgattctctccctaaca 274
Query: 438 gcagttccagatagtactcccccatagggacggttcacagttctgcggttcctagacaac 497
||| ||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 273 gcaattccagagagtactccaccatatggacggttcacagtcctgcggttcctagacaac 214
Query: 498 ctggaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtc 557
|||||||||||||||||||| ||||| | ||||| || ||||||||||||||||||||
Sbjct: 213 ctggaccttttgtactcagcaggccttaagtgggggatcccctggatcttcttcccggtg 154
Query: 558 acgggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccacca 617
||||| |||||||||||||| || |||||||| |||||||||||||| ||||| ||||||
Sbjct: 153 acggggcacttgggcccgctcgccctcttcttcgtgtactggtacacaagcttcccacca 94
Query: 618 ggggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtag 677
||||||||||||||||| |||||||||||||| || || |||||||| ||||| ||||||
Sbjct: 93 ggggtcttgacgacccgggtctggttggacttggtcgcgtagctgtgacgcttccggtag 34
Query: 678 gtcagacgctgcaccatcttgccgccg 704
|| || ||||||||||||| |||||||
Sbjct: 33 gtgaggcgctgcaccatctcgccgccg 7
>gb|CF761712.1|CF761712 DSAF1_80_A02.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_80_A02_A011 3', mRNA sequence
Length = 421
Score = 361 bits (182), Expect = 7e-098
Identities = 251/272 (92%), Gaps = 4/272 (1%)
Strand = Plus / Minus
Query: 247 ctagaagagactaagccattgataataactgtcgacaaaaatgtcttcccttgctg-cag 305
||||||||||||| ||||||| || || ||||||||||| |||||||||| | |||
Sbjct: 269 ctagaagagactacttcattgatcatcaccatcgacaaaaatatcttcccttgtttacag 210
Query: 306 aagagtggctcacttctgtttcagagttacttttttgaggaagtcttgtctttggtcttc 365
|||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 209 aagagtggttcacttctgtttcagagttacttt---gaggaagttttgtctttggtcttc 153
Query: 366 tgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatc 93
Query: 426 ctttctctaactgcagttccagatagtactcccccatagggacggttcacagttctgcgg 485
||||||||||||||||||||||| || ||||| ||||| || ||||||||||||||||||
Sbjct: 92 ctttctctaactgcagttccagagagcactccaccatatgggcggttcacagttctgcgg 33
Query: 486 ttcctagacaacctggaccttttgtactcagc 517
||||||||||||||||||||||||||||||||
Sbjct: 32 ttcctagacaacctggaccttttgtactcagc 1
Score = 60.0 bits (30), Expect = 3e-007
Identities = 61/69 (88%), Gaps = 3/69 (4%)
Strand = Plus / Minus
Query: 104 gaactcggactttcagttttagcaaagtgaacaaaagca--atagggggtcatat-gtca 160
|||||| ||||| |||||||||| ||||||||||||||| || |||| |||||| ||||
Sbjct: 421 gaactcagacttgcagttttagcgaagtgaacaaaagcaacatgggggatcatatagtca 362
Query: 161 tctcataat 169
|||||||||
Sbjct: 361 tctcataat 353
>gb|CF487899.1|CF487899 POL1_46_C09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_46_C09_A002 5', mRNA sequence
Length = 386
Score = 335 bits (169), Expect = 4e-090
Identities = 327/374 (87%), Gaps = 18/374 (4%)
Strand = Plus / Minus
Query: 98 tcatgtgaactcggactttcagttttagcaaagtgaacaaaagcaataggggg-tcatat 156
|||| ||||||| ||||| |||||||||| |||||||||||||||| | |||| ||||||
Sbjct: 365 tcatatgaactcagacttgcagttttagcgaagtgaacaaaagcaacatggggatcatat 306
Query: 157 gtcatctcataatcttagagatctc----gtagacagatttcaaggtgccctagaaacca 212
|||||||||||||||| || | | | |||||||||||||||||| |||||||||| |
Sbjct: 305 gtcatctcataatctttgacaccacaatggtagacagatttcaaggtaccctagaaac-a 247
Query: 213 gttgtccgctcaaga--tacaagaacaatagaacagctagaagagactaagccattgata 270
|||||| |||||||| ||| |||||| |||||||||||||||| |||||||
Sbjct: 246 gttgtcggctcaagacatactagaaca------cagctagaagagactacttcattgatc 193
Query: 271 ataactgtcgacaaaaatgtcttcccttgctg-cagaagagtggctcacttctgtttcag 329
|| || ||||||||||| |||||||||| | ||||||||||| |||| ||||||||||
Sbjct: 192 atcaccatcgacaaaaatatcttcccttgtttacagaagagtggttcacctctgtttcag 133
Query: 330 agttacttttttgaggaagtcttgtctttggtcttctgtaatttcaacaccttcttgaca 389
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agttacttt---gaggaagttttgtctttggtcttctgtaatttcaacaccttcttgaca 76
Query: 390 atcttctgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagat 449
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atcttctgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagag 16
Query: 450 agtactcccccata 463
|| ||||| |||||
Sbjct: 15 agcactccaccata 2
>gb|CF487818.1|CF487818 POL1_46_C09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_46_C09_A002 3', mRNA sequence
Length = 359
Score = 331 bits (167), Expect = 6e-089
Identities = 322/368 (87%), Gaps = 18/368 (4%)
Strand = Plus / Minus
Query: 104 gaactcggactttcagttttagcaaagtgaacaaaagcaataggggg-tcatatgtcatc 162
|||||| ||||| |||||||||| |||||||||||||||| | |||| ||||||||||||
Sbjct: 359 gaactcagacttgcagttttagcgaagtgaacaaaagcaacatggggatcatatgtcatc 300
Query: 163 tcataatcttagagatctc----gtagacagatttcaaggtgccctagaaaccagttgtc 218
|||||||||| || | | | |||||||||||||||||| |||||||||| |||||||
Sbjct: 299 tcataatctttgacaccacaatggtagacagatttcaaggtaccctagaaac-agttgtc 241
Query: 219 cgctcaaga--tacaagaacaatagaacagctagaagagactaagccattgataataact 276
|||||||| ||| |||||| |||||||||||||||| ||||||| || ||
Sbjct: 240 ggctcaagacatactagaaca------cagctagaagagactacttcattgatcatcacc 187
Query: 277 gtcgacaaaaatgtcttcccttgctg-cagaagagtggctcacttctgtttcagagttac 335
||||||||||| |||||||||| | ||||||||||| |||| ||||||||||||||||
Sbjct: 186 atcgacaaaaatatcttcccttgtttacagaagagtggttcacctctgtttcagagttac 127
Query: 336 ttttttgaggaagtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttc 395
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ttt---gaggaagttttgtctttggtcttctgtaatttcaacaccttcttgacaatcttc 70
Query: 396 tgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagatagtact 455
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 69 tgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagagagcact 10
Query: 456 cccccata 463
|| |||||
Sbjct: 9 ccaccata 2
>gb|BE638162.1|BE638162 WS1_96_B01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 638
Score = 323 bits (163), Expect = 1e-086
Identities = 307/355 (86%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| |||||||| || | |||||||||||||| || ||||||||||| || ||||
Sbjct: 405 cttgtccttggtcttttggatcttcaacaccttcttcacgatcttctgctcctcgaccaa 346
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
|| |||||||||||||| |||||||||||||| ||||| || || || ||||| |||||
Sbjct: 345 aaaggcacggatgatcctctctctaactgcagtaccagacagaacaccaccatatggacg 286
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 285 gttcacagtcctgcggttccttgacaacctggacctcttgtactcagcaggtctcaggtg 226
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| ||||| ||||| || ||||| || | ||||||
Sbjct: 225 tggaattccttggatcttcttcccggtgacggggcacttcggtccgctcgcgcgcttctt 166
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | || ||||||||||||||||| || ||||||||||| ||
Sbjct: 165 ggtgtactggtacacaagcctcccgccaggggtcttgacgacgcgggtctggttggattt 106
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
||||| ||||| |||||||| |||||||| || |||||||||||||||||||||
Sbjct: 105 ggtggcgtagctatgccgcttccggtaggtgagccgctgcaccatcttgccgccg 51
>gb|BG049090.1|BG049090 OV1_23_B10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 323 bits (163), Expect = 1e-086
Identities = 307/355 (86%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| |||||||| || | |||||||||||||| || ||||||||||| || ||||
Sbjct: 361 cttgtccttggtcttttggatcttcaacaccttcttcacgatcttctgctcctcgaccaa 302
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
|| |||||||||||||| |||||||||||||| ||||| || || || ||||| |||||
Sbjct: 301 aaaggcacggatgatcctctctctaactgcagtaccagacagaacaccaccatatggacg 242
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 241 gttcacagtcctgcggttccttgacaacctggacctcttgtactcagcaggtctcaggtg 182
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| ||||| ||||| || ||||| || | ||||||
Sbjct: 181 tggaattccttggatcttcttcccggtgacggggcacttcggtccgctcgcgcgcttctt 122
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | || ||||||||||||||||| || ||||||||||| ||
Sbjct: 121 ggtgtactggtacacaagcctcccgccaggggtcttgacgacgcgggtctggttggattt 62
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
||||| ||||| |||||||| |||||||| || |||||||||||||||||||||
Sbjct: 61 ggtggcgtagctatgccgcttccggtaggtgagccgctgcaccatcttgccgccg 7
>gb|BG464344.1|BG464344 EM1_72_E12.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 600
Score = 323 bits (163), Expect = 1e-086
Identities = 307/355 (86%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| |||||||| || | |||||||||||||| || ||||||||||| || ||||
Sbjct: 414 cttgtccttggtcttttggatcttcaacaccttcttcacgatcttctgctcctcgaccaa 355
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
|| |||||||||||||| |||||||||||||| ||||| || || || ||||| |||||
Sbjct: 354 aaaggcacggatgatcctctctctaactgcagtaccagacagaacaccaccatatggacg 295
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 294 gttcacagtcctgcggttccttgacaacctggacctcttgtactcagcaggtctcaggtg 235
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| ||||| ||||| || ||||| || | ||||||
Sbjct: 234 tggaattccttggatcttcttcccggtgacggggcacttcggtccgctcgcgcgcttctt 175
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | || ||||||||||||||||| || ||||||||||| ||
Sbjct: 174 ggtgtactggtacacaagcctcccgccaggggtcttgacgacgcgggtctggttggattt 115
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
||||| ||||| |||||||| |||||||| || |||||||||||||||||||||
Sbjct: 114 ggtggcgtagctatgccgcttccggtaggtgagccgctgcaccatcttgccgccg 60
>gb|BG464672.1|BG464672 EM1_72_E12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 323 bits (163), Expect = 1e-086
Identities = 307/355 (86%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| |||||||| || | |||||||||||||| || ||||||||||| || ||||
Sbjct: 414 cttgtccttggtcttttggatcttcaacaccttcttcacgatcttctgctcctcgaccaa 355
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
|| |||||||||||||| |||||||||||||| ||||| || || || ||||| |||||
Sbjct: 354 aaaggcacggatgatcctctctctaactgcagtaccagacagaacaccaccatatggacg 295
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 294 gttcacagtcctgcggttccttgacaacctggacctcttgtactcagcaggtctcaggtg 235
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| ||||| ||||| || ||||| || | ||||||
Sbjct: 234 tggaattccttggatcttcttcccggtgacggggcacttcggtccgctcgcgcgcttctt 175
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | || ||||||||||||||||| || ||||||||||| ||
Sbjct: 174 ggtgtactggtacacaagcctcccgccaggggtcttgacgacgcgggtctggttggattt 115
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
||||| ||||| |||||||| |||||||| || |||||||||||||||||||||
Sbjct: 114 ggtggcgtagctatgccgcttccggtaggtgagccgctgcaccatcttgccgccg 60
>gb|CF484626.1|CF484626 POL1_26_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_26_B05_A002 5', mRNA sequence
Length = 567
Score = 319 bits (161), Expect = 2e-085
Identities = 305/353 (86%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| |||||||| || | |||||||||||||| || ||||||||||| || ||||
Sbjct: 430 cttgtccttggtcttttggatcttcaacaccttcttcacgatcttctgctcctcgaccaa 371
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
|| |||||||||||||| |||||||||||||| ||||| || || || ||||| |||||
Sbjct: 370 aaaggcacggatgatcctctctctaactgcagtaccagacagaacaccaccatatggacg 311
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 310 gttcacagtcctgcggttccttgacaacctggacctcttgtactcagcaggtctcaggtg 251
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| ||||| ||||| || ||||| || | ||||||
Sbjct: 250 tggaattccttggatcttcttcccggtgacggggcacttcggtccgctcgcgcgcttctt 191
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | || ||||||||||||||||| || ||||||||||| ||
Sbjct: 190 ggtgtactggtacacaagcctcccgccaggggtcttgacgacgcgggtctggttggattt 131
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgc 702
||||| ||||| |||||||| |||||||| || |||||||||||||||||||
Sbjct: 130 ggtggcgtagctatgccgcttccggtaggtgagccgctgcaccatcttgccgc 78
>gb|BE593780.1|BE593780 WS1_102_B04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 529
Score = 315 bits (159), Expect = 3e-084
Identities = 306/355 (86%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| |||||||| || | |||||||||||||| || ||||||||||| || ||||
Sbjct: 409 cttgtccttggtcttttggatcttcaacaccttcttcacgatcttctgctcctcgaccaa 350
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
|| |||||||||||||| |||||||||||||| ||||| || || || ||||| |||||
Sbjct: 349 aaaggcacggatgatcctctctctaactgcagtaccagacagaacaccaccatatggacg 290
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 289 gttcacagtcctgcggttccttgacaacctggacctcttgtactcagcaggtctcaggtg 230
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| ||||| ||||| || |||| || | ||||||
Sbjct: 229 tggaattccttggatcttcttcccggtgacggggcacttcggtgcgctcgcgcgcttctt 170
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | || ||||||||||||||||| || ||||||||||| ||
Sbjct: 169 ggtgtactggtacacaagcctcccgccaggggtcttgacgacgcgggtctggttggattt 110
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
||||| ||||| |||||||| |||||||| || |||||||||||||||||||||
Sbjct: 109 ggtggcgtagctatgccgcttccggtaggtgagccgctgcaccatcttgccgccg 55
>gb|CD463717.1|CD463717 ETH1_46_C04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_46_C04_A002 3', mRNA sequence
Length = 660
Score = 315 bits (159), Expect = 3e-084
Identities = 306/355 (86%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| |||||||| || | |||||||||||||| || ||||||||||| || ||||
Sbjct: 425 cttgtccttggtcttttggatcttcaacaccttcttcacgatcttctgctcctcgaccaa 366
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
|| |||||||||||||| |||||||||||||| ||||| || || || ||||| |||||
Sbjct: 365 aaaggcacggatgatcctctctctaactgcagtaccagacagaacaccaccatatggacg 306
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 305 gttcacagtcctgcggttccttgacaacctggacctcttgtactcagcaggtctcaggtg 246
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| ||||| ||||| || ||||| || | ||||||
Sbjct: 245 tggaattccttggatcttcttcccggtgacggggcacttcggtccgctcgcgcgcttctt 186
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | || ||||||||||||||||| || ||||||||||| ||
Sbjct: 185 ggtgtactggtacacaagcctcccgccaggggtcttgacgacgcgggtctggttggattt 126
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
||||| ||||| |||||||| | |||||| || |||||||||||||||||||||
Sbjct: 125 ggtggcgtagctatgccgcttccagtaggtgagccgctgcaccatcttgccgccg 71
>gb|CD463769.1|CD463769 ETH1_46_C04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_46_C04_A002 5', mRNA sequence
Length = 620
Score = 315 bits (159), Expect = 3e-084
Identities = 306/355 (86%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| |||||||| || | |||||||||||||| || ||||||||||| || ||||
Sbjct: 424 cttgtccttggtcttttggatcttcaacaccttcttcacgatcttctgctcctcgaccaa 365
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
|| |||||||||||||| |||||||||||||| ||||| || || || ||||| |||||
Sbjct: 364 aaaggcacggatgatcctctctctaactgcagtaccagacagaacaccaccatatggacg 305
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 304 gttcacagtcctgcggttccttgacaacctggacctcttgtactcagcaggtctcaggtg 245
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| ||||| ||||| || ||||| || | ||||||
Sbjct: 244 tggaattccttggatcttcttcccggtgacggggcacttcggtccgctcgcgcgcttctt 185
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | || ||||||||||||||||| || ||||||||||| ||
Sbjct: 184 ggtgtactggtacacaagcctcccgccaggggtcttgacgacgcgggtctggttggattt 125
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
||||| ||||| |||||||| | |||||| || |||||||||||||||||||||
Sbjct: 124 ggtggcgtagctatgccgcttccagtaggtgagccgctgcaccatcttgccgccg 70
>gb|BE592634.1|BE592634 WS1_96_B01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 363
Score = 291 bits (147), Expect = 5e-077
Identities = 255/291 (87%)
Strand = Plus / Minus
Query: 414 gcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacggttc 473
|||||||||||||| |||||||||||||| ||||| || || || ||||| |||||||||
Sbjct: 341 gcacggatgatcctctctctaactgcagtaccagacagaacaccaccatatggacggttc 282
Query: 474 acagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatgggga 533
||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| || |||
Sbjct: 281 acagtcctgcggttccttgacaacctggacctcttgtactcagcaggtctcaggtgtgga 222
Query: 534 atgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtg 593
|| || ||||||||||||||||| ||||| ||||| || ||||| || | ||||||||||
Sbjct: 221 attccttggatcttcttcccggtgacggggcacttcggtccgctcgcgcgcttcttggtg 162
Query: 594 tactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtg 653
||||||||||| ||| | || ||||||||||||||||| || ||||||||||| || |||
Sbjct: 161 tactggtacacaagcctcccgccaggggtcttgacgacgcgggtctggttggatttggtg 102
Query: 654 gcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccgccg 704
|| ||||| |||||||| |||||||| || |||||||||||||||||||||
Sbjct: 101 gcgtagctatgccgcttccggtaggtgagccgctgcaccatcttgccgccg 51
>gb|CF760792.1|CF760792 DSAF1_66_G02.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_66_G02_A011 5', mRNA sequence
Length = 404
Score = 291 bits (147), Expect = 5e-077
Identities = 234/263 (88%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||| ||||||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 264 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgttcctcaacc 205
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||| || || ||||| ||| ||||||| |||||||| ||||| |||
Sbjct: 204 aagaaagcacggatgattctctccctaacagcaattccagagagtactccaccatatgga 145
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 144 cggttcacagtcctgcggttcctagacaacctggaccttttgtactcagcaggccttaag 85
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
||||| || |||||||||||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 84 tgggggatcccctggatcttcttcccggtgacggggcacttgggcccgctcgccctcttc 25
Query: 588 ttggtgtactggtacacgagctt 610
|| |||||||||||||| |||||
Sbjct: 24 ttcgtgtactggtacacaagctt 2
>gb|CF761895.1|CF761895 DSAF1_83_B05.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_83_B05_A011 5', mRNA sequence
Length = 540
Score = 291 bits (147), Expect = 5e-077
Identities = 234/263 (88%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||| ||||||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 264 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgttcctcaacc 205
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||| || || ||||| ||| ||||||| |||||||| ||||| |||
Sbjct: 204 aagaaagcacggatgattctctccctaacagcaattccagagagtactccaccatatgga 145
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 144 cggttcacagtcctgcggttcctagacaacctggaccttttgtactcagcaggccttaag 85
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
||||| || |||||||||||||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 84 tgggggatcccctggatcttcttcccggtgacggggcacttgggcccgctcgccctcttc 25
Query: 588 ttggtgtactggtacacgagctt 610
|| |||||||||||||| |||||
Sbjct: 24 ttcgtgtactggtacacaagctt 2
>gb|BG049101.1|BG049101 OV1_23_C10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 280 bits (141), Expect = 2e-073
Identities = 276/321 (85%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| |||||||| || | |||||||||||||| || ||||||||||| || ||||
Sbjct: 321 cttgtccttggtcttttggatcttcaacaccttcttcacgatcttctgctcctcgaccaa 262
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
|| |||||||||||||| |||||||||||||| ||||| || || || ||||| |||||
Sbjct: 261 aaaggcacggatgatcctctctctaactgcagtaccagacagaacaccaccatatggacg 202
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 201 gttcacagtcctgcggttccttgacaacctggacctcttgtactcagcaggtctcaggtg 142
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| ||||| ||||| || ||||| || | ||||||
Sbjct: 141 tggaattccttggatcttcttcccggtgacggggcacttcggtccgctcgcgcgcttctt 82
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | || ||||||||||||||||| || ||||||||||| ||
Sbjct: 81 ggtgtactggtacacaagcctcccgccaggggtcttgacgacgcgggtctggttggattt 22
Query: 650 cgtggcatagctgtgccgctt 670
||||| ||||| ||||||||
Sbjct: 21 ggtggcgtagctatgccgctt 1
>gb|CF484551.1|CF484551 POL1_26_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_26_B05_A002 3', mRNA sequence
Length = 576
Score = 244 bits (123), Expect = 1e-062
Identities = 279/331 (84%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttct 431
|||||||||||||| || ||||||||||| || |||| || | |||||||||||| |||
Sbjct: 384 ttcaacaccttcttcacgatcttctgctcctcgaccaaaaagggacggatgatcctctct 325
Query: 432 ctaactgcagttccagatagtactcccccatagggacggttcacagttctgcggttccta 491
||||||||||| ||||| || || || ||||| |||||| ||||||| |||||| ||||
Sbjct: 324 ctaactgcagtaccagacagaacaccaccatatggacgggtcacagtcctgcgggtcctt 265
Query: 492 gacaacctggaccttttgtactcagctggcctcagatggggaatgccctggatcttcttc 551
|||||||||||||| ||||||||||| || ||||| ||||||| || ||||||||||||
Sbjct: 264 gacaacctggacctcttgtactcagcagggctcagggggggaattccttggatcttcttc 205
Query: 552 ccggtcacgggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttg 611
|||| ||||| |||| || ||||| || | |||||||||| ||||| |||| ||| |
Sbjct: 204 ccggggacgggggacttcgggccgctcgcgcgcttcttggtggactgggacacaagcctc 145
Query: 612 ccaccaggggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttg 671
|| ||||||| |||||||||||| |||||| |||| || ||||| ||||| ||||||||
Sbjct: 144 ccgccagggggcttgacgacccgggtctgggtggatttggtggcgtagctatgccgcttc 85
Query: 672 cggtaggtcagacgctgcaccatcttgccgc 702
||| |||| || |||||||||||||||||||
Sbjct: 84 cgggaggtgagccgctgcaccatcttgccgc 54
>gb|BE594094.1|BE594094 WS1_102_B04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 321
Score = 242 bits (122), Expect = 4e-062
Identities = 215/246 (87%)
Strand = Plus / Minus
Query: 459 ccatagggacggttcacagttctgcggttcctagacaacctggaccttttgtactcagct 518
||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||
Sbjct: 300 ccatatggacggttcacagtcctgcggttccttgacaacctggacctcttgtactcagca 241
Query: 519 ggcctcagatggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctg 578
|| ||||| || ||||| || ||||||||||||||||| ||||| ||||| || ||||
Sbjct: 240 ggtctcaggtgtggaattccttggatcttcttcccggtgacggggcacttcggtgcgctc 181
Query: 579 gctctcttcttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtc 638
|| | ||||||||||||||||||||| ||| | || ||||||||||||||||| || |||
Sbjct: 180 gcgcgcttcttggtgtactggtacacaagcctcccgccaggggtcttgacgacgcgggtc 121
Query: 639 tggttggacttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttg 698
|||||||| || ||||| ||||| |||||||| |||||||| || |||||||||||||||
Sbjct: 120 tggttggatttggtggcgtagctatgccgcttccggtaggtgagccgctgcaccatcttg 61
Query: 699 ccgccg 704
||||||
Sbjct: 60 ccgccg 55
>gb|CW329758.1|CW329758 104_826_11480014_116_35998_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480014, DNA
sequence
Length = 718
Score = 230 bits (116), Expect = 2e-058
Identities = 119/120 (99%)
Strand = Plus / Minus
Query: 614 accaggggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcg 673
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 443 accaggggtcttgacgacccgcgtctggttggactttgtggcatagctgtgccgcttgcg 384
Query: 674 gtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaacccta 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaacccta 324
Score = 135 bits (68), Expect = 7e-030
Identities = 77/80 (96%)
Strand = Plus / Minus
Query: 537 ccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtac 596
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 649 ccctggatcttcttcccggtcacggggcactggggcccgctggctctcttcttggtgtac 590
Query: 597 tggtacacgagcttgccacc 616
|||||||||||||| |||||
Sbjct: 589 tggtacacgagcttaccacc 570
>gb|CW329759.1|CW329759 104_826_11480014_148_35997_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480014, DNA
sequence
Length = 675
Score = 230 bits (116), Expect = 2e-058
Identities = 119/120 (99%)
Strand = Plus / Plus
Query: 614 accaggggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcg 673
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 443 accaggggtcttgacgacccgcgtctggttggactttgtggcatagctgtgccgcttgcg 502
Query: 674 gtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaacccta 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaacccta 562
Score = 143 bits (72), Expect = 3e-032
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 537 ccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtac 596
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 237 ccctggatcttcttcccggtcacggggcacttgggcccgctggctctcttcttggtgtac 296
Query: 597 tggtacacgagcttgccacc 616
|||||||||||||| |||||
Sbjct: 297 tggtacacgagcttaccacc 316
>gb|CW451282.1|CW451282 fsbb001f191e17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191e17, DNA
sequence
Length = 635
Score = 230 bits (116), Expect = 2e-058
Identities = 119/120 (99%)
Strand = Plus / Plus
Query: 614 accaggggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcg 673
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 258 accaggggtcttgacgacccgcgtctggttggactttgtggcatagctgtgccgcttgcg 317
Query: 674 gtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaacccta 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtaggtcagacgctgcaccatcttgccgccgtcgcgcgcgccgccggtggataaacccta 377
Score = 143 bits (72), Expect = 3e-032
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 537 ccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtac 596
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 52 ccctggatcttcttcccggtcacggggcacttgggcccgctggctctcttcttggtgtac 111
Query: 597 tggtacacgagcttgccacc 616
|||||||||||||| |||||
Sbjct: 112 tggtacacgagcttaccacc 131
>gb|AW286157.1|AW286157 LG1_328_B08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 312
Score = 224 bits (113), Expect = 1e-056
Identities = 271/318 (85%), Gaps = 18/318 (5%)
Strand = Plus / Minus
Query: 81 accaactgatgcccaactcatgtgaactcggactttcagttttagcaaagtgaacaaaag 140
||||||||| ||||||||||| ||||||| ||||| |||||||||| |||||||||||||
Sbjct: 308 accaactgaagcccaactcatatgaactcagacttgcagttttagcgaagtgaacaaaag 249
Query: 141 caataggggg-tcatatgtcatctcataatcttagagatctc----gtagacagatttca 195
||| | |||| |||||||||||||||||||||| || | | | ||||||||||||||
Sbjct: 248 caacatggggatcatatgtcatctcataatctttgacaccacaatggtagacagatttca 189
Query: 196 aggtgccctagaaaccagttgtccgctcaaga--tacaagaacaatagaacagctagaag 253
|||| ||||| |||| ||||||| |||||||| ||| |||||| ||||||||||
Sbjct: 188 aggtaccctaaaaac-agttgtcggctcaagacatactagaaca------cagctagaag 136
Query: 254 agactaagccattgataataactgtcgacaaaaatgtcttcccttgctg-cagaagagtg 312
|||||| ||||||| || || ||||||||||| |||||||||| | ||||| ||||
Sbjct: 135 agactacttcattgatcatcaccatcgacaaaaatatcttcccttgtttacagaaaagtg 76
Query: 313 gctcacttctgtttcagagttacttttttgaggaagtcttgtctttggtcttctgtaatt 372
| |||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 75 gttcacttctgtttcaaagttacttt---gaggaagttttgtctttggtcttctgtaatt 19
Query: 373 tcaacaccttcttgacaa 390
||||||||||||||||||
Sbjct: 18 tcaacaccttcttgacaa 1
>gb|AW923806.1|AW923806 DG1_59_H04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 287
Score = 163 bits (82), Expect = 3e-038
Identities = 151/171 (88%), Gaps = 6/171 (3%)
Strand = Plus / Minus
Query: 62 caacaagcaggaaataaacaccaactgatgcccaactcatgtgaactcggactttcagtt 121
|||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 237 caacaagcaggaaataaataccaactgaagcccaactcatatgaactcagacttgcagtt 178
Query: 122 ttagcaaagtgaacaaaagcaata-gggggtcatatgtcatctcataatcttagagatc- 179
||||| |||||||||||||||| | |||| |||||||||||||||||||||| || | |
Sbjct: 177 ttagcgaagtgaacaaaagcaacatggggatcatatgtcatctcataatctttgacacca 118
Query: 180 ---tcgtagacagatttcaaggtgccctagaaaccagttgtccgctcaaga 227
| |||||||||||||||||| ||||||||| |||||||| ||||||||
Sbjct: 117 caatggtagacagatttcaaggtaccctagaaa-cagttgtcggctcaaga 68
>gb|DN552544.1|DN552544 pSHR-RT-A-H1_B08_C360 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 323
Score = 163 bits (82), Expect = 3e-038
Identities = 138/155 (89%), Gaps = 5/155 (3%)
Strand = Plus / Plus
Query: 62 caacaagcaggaaataaacaccaactgatgcccaactcatgtgaactcggactttcagtt 121
|||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 107 caacaagcaggaaataaacaccaactgaagcccaactcatatgaactcagacttgcagtt 166
Query: 122 ttagcaaagtgaacaaaagcaata-gggggtcatatgtcatctcataatcttagagatc- 179
||||| |||||||||||||||| | |||| |||||||||||||||||||||| || | |
Sbjct: 167 ttagcgaagtgaacaaaagcaacatggggatcatatgtcatctcataatctttgacacca 226
Query: 180 ---tcgtagacagatttcaaggtgccctagaaacc 211
| |||||||||||||||||| |||||||||||
Sbjct: 227 caatggtagacagatttcaaggtaccctagaaacc 261
Score = 42.1 bits (21), Expect = 0.078
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 gcaacaagtaggaaataaacacaaactga 39
|||||||| ||||||||||||| ||||||
Sbjct: 106 gcaacaagcaggaaataaacaccaactga 134
>gb|DN552706.1|DN552706 pSHR-RT-MR-H1_B12_C360 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 323
Score = 163 bits (82), Expect = 3e-038
Identities = 138/155 (89%), Gaps = 5/155 (3%)
Strand = Plus / Plus
Query: 62 caacaagcaggaaataaacaccaactgatgcccaactcatgtgaactcggactttcagtt 121
|||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||
Sbjct: 107 caacaagcaggaaataaacaccaactgaagcccaactcatatgaactcagacttgcagtt 166
Query: 122 ttagcaaagtgaacaaaagcaata-gggggtcatatgtcatctcataatcttagagatc- 179
||||| |||||||||||||||| | |||| |||||||||||||||||||||| || | |
Sbjct: 167 ttagcgaagtgaacaaaagcaacatggggatcatatgtcatctcataatctttgacacca 226
Query: 180 ---tcgtagacagatttcaaggtgccctagaaacc 211
| |||||||||||||||||| |||||||||||
Sbjct: 227 caatggtagacagatttcaaggtaccctagaaacc 261
Score = 42.1 bits (21), Expect = 0.078
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 gcaacaagtaggaaataaacacaaactga 39
|||||||| ||||||||||||| ||||||
Sbjct: 106 gcaacaagcaggaaataaacaccaactga 134
>gb|CW054019.1|CW054019 104_294_10516295_114_30182 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516295, DNA
sequence
Length = 557
Score = 127 bits (64), Expect = 2e-027
Identities = 85/92 (92%)
Strand = Plus / Plus
Query: 432 ctaactgcagttccagatagtactcccccatagggacggttcacagttctgcggttccta 491
||||| ||| ||||||| |||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 43 ctaacagcaattccagagagtactccaccatatggacggttcacagtcctgcggttccta 102
Query: 492 gacaacctggaccttttgtactcagctggcct 523
|||||||||||||||||||||||||| |||||
Sbjct: 103 gacaacctggaccttttgtactcagcaggcct 134
>gb|AW922577.1|AW922577 DG1_45_F04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 373
Score = 119 bits (60), Expect = 4e-025
Identities = 108/124 (87%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||| ||||||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 124 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgttcctcaacc 65
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||| || || ||||| ||| ||||||| |||||||| ||||| |||
Sbjct: 64 aagaaagcacggatgattctctccctaacagcaattccagagagtactccaccatatgga 5
Query: 468 cggt 471
||||
Sbjct: 4 cggt 1
>gb|CL158096.1|CL158096 104_346_10803303_116_31376_279 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803303, DNA
sequence
Length = 618
Score = 109 bits (55), Expect = 4e-022
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 614 accaggggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcg 673
||||||||||||||||||||| |||||||||||||| || || |||||||| ||||| ||
Sbjct: 511 accaggggtcttgacgacccgggtctggttggacttggtcgcgtagctgtgacgcttccg 452
Query: 674 gtaggtcagacgctgcaccatcttgccgccg 704
|||||| || ||||||||||||| |||||||
Sbjct: 451 gtaggtgaggcgctgcaccatctcgccgccg 421
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 211,924
Number of Sequences: 832831
Number of extensions: 211924
Number of successful extensions: 60329
Number of sequences better than 0.5: 64
Number of HSP's better than 0.5 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60153
Number of HSP's gapped (non-prelim): 117
length of query: 803
length of database: 491,359,669
effective HSP length: 20
effective length of query: 783
effective length of database: 474,703,049
effective search space: 371692487367
effective search space used: 371692487367
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)